Spo06838 (gene) | SpinachBase

Overview


Name	Spo06838
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	KRR1 small subunit processome component (KRR-R motif-containing protein 1)
Location	SpoScf_01633 : 121457 .. 130923 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACATTCCTCCCTTGGCCGACCCCGTTTCACCGTTCCGTTTCCGTTTCCCTAGTTTATAAAGTTCGATTAACCGCTGTCTGTTCTCTCTCTCTCTTTCCCCTTCCTGACCTTGAGTTCCGCCTCCACCGCAGACATGGCAGACATAGAGCAGCAAAACAATGTCGATGAAGAAGTAGTACCAAAACAGAGGACTAAACACAAGGGTAAACACGATAAGGACAAGCCATGGGATGACCCCAGTATCGACCATTGGAAAATCGAAAAATTCGACCCTTCATGGAACGATTCTGGCTTGCTCGATGTCAGCTCTTTCTCTACTATCTTCCCCCAATACAGAGGTTAATTTCTTCTCTTACTCTAATTAACTTCATATCCCCCCTTGATTATGGCTTCTATTTTTTATAATTTCAATTGGGTATGCTTTTTTCATTCATTTACTTGATTTTTCGAGCTGCTTGACTTGCGGCGGAACGTTTTTCTGTAGATAAATGCGCGGTTCGATCTATATGTGTAATTTTTTAGCTTAGTTTGTTGTGTTAATTTAGGGTTTTTGCCTCTTTTTTGTGTGTGTTAATTTAGGGTTTATGCGTCCTAATTAAAACTAGTTTGCTGTGTTAATTTAGGGTTCGTGCCTCATACTTAAGCTTAGTTTCCTGTGTCATTCCAGGGTTCTTATCTGAATTGGGTTTGCTCATTTCTTTTTGCATTTGCACTTTCATGGTTTACTATTAAGTTTTGGAAGATAAGTTTGCTTAATTTTGGACACTCCCTCCATTCCTCTGAATTTGTTACTGTCTGCATGCCTTAGGAAGGGAGAGAGATGGTATAGAAGAGGTATGAAAGAAAAAAGCATAAAGTATTTATAGTTTGGTAAAAGTGTAAAATAACAAACATGAAGTGTAACAATTTGAAATTGGAGGGAATACAATTTTCATGATTGTGTTTTGATATTTGTGTGGTTAACCTGTGTAATCAGAAAAAGTGCATTTCCCCACCTCCTCGGTAGTTTGGCTGAGATGAGTAGTTGTCGAACAACTCAAACCTACCTAGCTTGCTTTTGGATCTATCGATGCTTTGGGCTCTGTGTTTTGGAATTTGGTATACATATGCCTCTCAGAATGGTCTTAATCTATTCATCCAGAGTCCTCTTTTCTTTATAATTTGCAGCCATCTGGAATCTCCTTTTCTTTCACGCGTCCTACTTTTTCTTTTTGTTCTTATAATGTTGAAAACCATTTTGTCCAAGAGAAGAACATCTTATTTCGAACCCCTAGCAGAAATGTAGTTCTCTTAAGAACCGCTTCATTCAGTCAAGAACTTTACAAAAATGACTATTACTGTTGTCCTCAGAGGAATAAAAGATTGTTTTTATGAGACATTCCATTTATTCTTATTAGTCTTGTATGTTAAACCATGTTCATTAACACTCTATTAAATCTTGTAGAGGTCTTACCTAAAGAGCTAGTGGAAGGATTTCTATGTTTAGTCAATCTGTGGAAATTGTTGCAAAATGGTGAAACCGGTAAAAGTGAATGTGCGAGGATAGCAAAATGGTGTTACAAGATATTAAACAAAAGTTATCTAATATAGAAGAATGAATTGAGCCATATATATTTTCCACTTCTGCTTATGGGACTTAGTGGTATAAGAGTTCATTATGAGTTGGTGACTAGCATGGACTCCAATCAGCCATATATTATCTAATAACTGGTAAGAACTAAGAAAGTTTCTGGGATGAATTTATTTGGATATTTGCATTAAAACTTGCTGGCAGCCTGACAGGCCGGTGCCATTGTTATTCCTTCCCTTCTCTTTGAGTATTACTTTTATTACTTCAGGAGATACAATTTTTATGGTTAAACTATTTTGTATGGAAAATGTTTGGGTTATTCACTGTTATTTATCGTTTTCTATGTTTTACAGAGAAATATCTGCAAGATGTTTGGCCAACGGTAAAGGCTGCATTGCGGGAGCATGGTATTTCATGTGAGCTTAATTTGGTATGGTTTTGTTCTTTTATGTTCCCAATTTGAAAAGCTATGACGTAGACCTCTGTGGTTACTTATTAGGTTGATGACAGAGAGGCTGTTATTACTTATTAGGTTGATGCATACTTACACTTTCCTCTAAATTCTCTGCCCCCACCCACTAGACAGATGTGATTGTCAAATGTCATGCTTGTACTAATAGCAGACCTACGGCTACAATTCTTTCCACAAGCTCTGCATAACTGATTCAAATAAGAAGGCTAGGATAACTGGAGAAGGCTGATAAGTCCTTTTTTCCTTGGGAAATAATGTCTTACTCTTCTTTTTAGTTTTTTAACCTGTCACGATAATGTTACATAGGGAGTAATACTTGTGAAGTCGGCAGTTCAGTGACTGAGGTTTGTTATAATTTAGGTTCTGGAGACACGGGTCCCTGGGACTTTAACAATGCTACATTAAGGAATAAGTATTGAGACTAGCTTGATTAAGGATGTCTTTGACAATGCCATATGAATTGTCGGTAATAAAATCCGATATTAATTGCCTGGATTACCTTCTCAGAATCTCAAAAGTATTTTTGATTCACGCCAATCTTCTTAGGTAAGTTTTGTGATAAGGTTGAGGACTGCCAGCACTTCACGTTGGGGGGGTGGGGGACTGAAATTCTCTAGGTAAGGATCCTGTGCTTAGCATTTAGCAATTACCTGGATGAATGAGGCGAATCTAATAGACGTTACAGACCACCCTATGGCCACCTTGCTGGTATTAGGATTGTTTTACTTTCTAAGAGGCGTCCACCTTAGTGGTGAACTGAGGAGCAGAATCTATTTCTCTAGAGAGAATCTTCAGTGATTCTAAAGAGGGCTCTCCTCTTGTTTCTGGAGCTGTCTTGCTTGGGTACCTTTGAGAAGTTCTCTTGTTTTCACATTAGAATTCATCCATGTTTCAGTCTCTTTTAGTCAATGTAATTAGATTCAAATTCACACTCTTGAAAAAATGAAAATAACTGAGCTGTAAAGTAATACACCTACACTTCTATGGATCCCAACCAAAAGTCCGAGACAGAATTTCTATGTTACTATACACAAAGAGTTCACATAATATGACCGATTTTTTAGTCCAAAATTAACAAGGCTGCAAAATATTTGCCTTGTACTTGAGACTTATTTTCTTTTCTCTCCATATTGCATCACTTTCTACAAAACAAGCTCTATAACTGCAGATTGCAGTAGCTGTGTGCTGATTCTACCCAGTTGAATACCCTGATGTGCATGTGTGATTAATTAGCATTTCTCTATTTAGTAACCTGTAGCTTCATTATTGCAAACTAATATTTTCCTACACACTTTAGGCTCTGTCCTATTTTTGGTTGGTCTATTTACAGAAAGTATCTCTGTACTTCATTCTCTCAGTTTCCATGGGAAGTCCACATAGCCCTGAAAAAACCATGCAGAAGAAAGCCTATAGACATCAATAGTAGTTAGATTCTTTTCAATTGAGACTGCTCATTTAAGCAACCTGTAGTAGCCGACATCTTTTGGAGAGTTAGCCAGAGAATAATTTCATTCCTCGATGTAGGGTCATTATTACAAACTAATATTTTCAAGCTGCTTTGTGCTTCGTCCGAGTTTTTGGTTGGTCTTTATGTAAAAAGTTGTCCCTGTACTTCATTCTCCCAGTGTCCATAGGAAGTCTACATAGCCCTTTTATCTATAAAAAGATCCATAAACACCATGCAGAATAAAGCCTATAGACATCTGTAGTAGTTAGGTTCTTTTCAGTTGAGACTTCTCATCTCAGCAACCTGTAGTAGCTGGCATCTTTTGAAGAGTTAACCAAAGAATACATACTTCTTTGATTTAGTCTTGTTGCTTTATTGCAAACCAGTTTTTCCACAGCAAGGATCTGTCTAAGTTTTTGTTTCGTCTTTTTTATACAAAGTATCCCTGTACTTTATTCTCTCAGCCTCCATACATAGTCCTCATAGCCTTGGGTCCCGTGATATCTGAGAAAAAACATAAAAACGATAACGTTTTGTGTCCGAATTGTTCAGGTAGTATTTTTGGAGACGATGTCAACTTTCTTCTCCCACACTTCAGTGGCAACTACTTGTCTTTCTCTTTTCTAATATCTATCAGGTTTATAAAAAATCAGCTATTATTCCTTCAAATTAGTATCGACAGTAACTTGAGCAAAAAAAAGGAAGAAGAAAGACAATTAGATCGATATTATATTATCACAGAAGGTTAAAGGATACATTATCAAGCATTCAAGTGCCTGATTCACTGAAAGCTACTCAATATTCTGGATACCTTTCTCTTTGCCTACTAATCCCTTATTTATAGCATTTCTGAGTCTTTTTTCCATGTAACCAACCAACTGTCTTCCTCTTCAAGCTACCCTTACTAAACTAATTGTACAATACCTAAAACTACCCCCTTTCTATTAGGCTAATTCGTTACAGAGGGACTGTAAAACAGTCATTTTATTTGTCTCACATGTCACAGTTAAATTCGACATAGTAATCGCTTAATTGTAGCTGACATAGTCATTTTATGCGTATGGAGATTCTTTATTGATGGAGCAATCATATAATGTATTATGTACTGAAAATTAGCCTCTCATTGAAGGGGCTTTACTTGGTTATAAAGTTGAGACCTAGAGAATCGCTGGAAGGGGCTTTGATTGATGGGAATGCTAAAACTTGATATGGTACACTCACTGTGTTTCGGGATACACCCTTTGCTAAAATTGTTCTTTTCGATGCTATTCTTAGTTCTCGGTTAATCAGGGAATACTGTGGATGGTAGTGATGGTAAATGGGAAAACAAGATGACAGTTGCTTGTGTCCTAGTTGAGTTAGTTGTTTACCAGATTCCCTTGTCCAAAACGAAACAATTATGATTTATTGACAGAGATCACCATAATTAACTCCCTTCATCCCTCCTATTTTATCACAATAGGGTTAAACACACAAATATTGAACCTAGAGCATAGCTAGGGTTTAGCACAGGCTATTTGAAACATTTAAAAAGAAAAAGGGATACTGTTGCATTTTATCATTTGAGATTAGTGCCCGCAAGGGTATTTTGGGAAATGAAATGGGCCTTGTCCCAAAAAAAAAAGAAAAATAATCTGGGTCATCCATGTTAAGGAAGGGTGGAAAATGTTAGGGACCAAGGGAGTAGCTGTTTATTCATCATGTTGAGAAATATTTGAGCCTGACTCTAATTTTTCTTGGTTTTCAGGTTGAAGGAACTATGACTGTTTCAACAACTAGAAAGACCAGAGATCCATACATTATAGTGAAAGCTAGGGACCTCATTAAACTTTTGTCGAGAAGTGTTCCGGCACCTCAGGTATGTCTTCAACTCCTTTTTGTGTCATTTATATATGTAGTTCACCCTATAGTTTTCCGGCACCTCAGGTATGTCTTCAACTCCTTTTTGTGTCATTTATATATGTAGTTCACCCTATGTTACTGTCTTTTCTCCCCACTATTTAAGATTCTGTTTGAAGTATATTCCTATAAAACAACGATGATCTACATTCTAGTTTGCATGCAATCTTCCACCCCTCTTCTCAGTTGAAGTTTTTGGGTATACTCACTCGGTGTGGCTGTTTTGTGTGTTTAGGCAATCAAGATACTTGATGACGAAATGCAATGTGATATCATCAAGATTGGTAATCTAGTGAGAAATAAGGTGCGTTTCGTTCTGCTGAAAGGTGTATTTACTGTATTTGCTTCATTTGTCTTTTCTTTTGTGATGGTTAATCACTATGCACACTGCCAGTTCATTATTATGCTCTTCAATTCTGATGCATATAATGATCACACGGAGAACAAAATAGAAGGTGAAGGCGTGAAGCTGTGTCCTTGTCCATTTAATATTATACTTGGGTGGTATGAGCTGATCTAGAATTGCACTGACCTAAGCAAGCAATTTAAGTGTTGAAAACAAACGCAGATCTTGCTCGGATAATCTTATTGTGACACAGTATATGCCACTTGCTGAAGATAGTATCAGTTAGACTATACTTTCTGTAGTATTTAAACTCAACATTCAACCCGGCCTTATTCTGTCAACCACGACACCCGGTTGCGGACAGAAGTTATGGGTTGGATTCTCCGTGGAGAAATGGATACAACATGTTTGTTGAAAGAAGAAAGCAAAAGGCGATGAAATCAGAACTCTCACCTTCTCATATTAAAACAATAGCGTGTTAATGTCGAAATATCAGTAGTTTATCTGACCTAAATCTGAAAATTAAGTCATCAAATCAATACTCAATAGGAAAAGAGAATGAAATGCTGGGGTTTCTGGATGCTGGTGATATTTGACTGTTGTTATGGTGTTGGGACAGATGATTGGGGGTAGCCAGCTGGTCAAGTGTTTCTTGACCATAGTAAAAGAGGTCTTTTGTCAAACTAATTTTTGCCATTTGATAAAAATATAAACAGATGTTCATAATACTAATCAAAATACTAATCAAAATACTACTAATGTACTACCATGAAAGCAACTTCAAATCTCCAATAGAATCATTGTTACTTTTTTTTAATTATGACAGATAAAAGTTTGAGGAAAAAGAAGTTATTCAGTTCAAACTGTTGCAAATAATCATGCTAATTCACCATTCCATTCTATTGCGATGTGAAATTGGACAATGCATAGGAAATAATGTCTCCGTTAAATTGTCACATTGAAGTCTTATTTTGAATGTGTCAAAATTTGAAACACAGGTTATATAGCTTTTGAAAAAAGGTTATATAGCTTATGTGAATAAAGTATTTCTTGTCTCTGTCCAATATGTGCAAGTAATTGTGATAGCTTAAGCTTATGTGTATTATGGACACACTGCTTCAGGCGTAGCTTGATTGTTTGTATTGCTGATTGCAGGCTCGCTTTGTGAAGCGGCGGCAACATCTTCTTGGTCCCAATAATTCTACCTTAAAGGTTTGTATTTGTCTCAAGTAGAAGAAAATCATGCCCTTGAGAAATTGGGGGAAAGTGAGCGTGTGAAATTTTGGAGGAAGTATGGTGCTATGGTAGACTGATGGCCAACATAATTTTTTTTAAAAACACTTCTGTGGTTCACGCTTATAATAGCTATGTAGGGAATTTGAATAGGGAGTTGATCGGTGGGTGGGTTGTCGGGAAGACACACTTAATTTCTCTGACTTAGTGTTTCCTACGATGCAGGCACTTGAAATCTTGACAGGCTGCTACATCCTTGTTCAGGTTTGCTTCAAAAACTACTTGTTATGTTTGAGATCTTTTCTTCAGGAAACAATTTTTCAGGAATGTCTGTCTTGTAAGAATCCCAACAAAAAGTTCAAAACAGTATTACCGAATTTCTTAATCACCCCGCGTACCGAAAACATAACACGAGAATGACACATTTTTGGTCTAATTTATCAAATTAGGTAGTGAATTTCGAACCCATACCCAATCTAACAGTAAAGGATCAGGTAACAATGATTCAAAACTAACTAATAGTGATATCTTTTTAATCGAAATAAGTAACGTATGGAGTATGATTATAAAAAGACCCACCCACAATCTTCCCCATTGTTCTGGGATTACCATGGAGGATATTTGAACTTTATTTCAAATTCGTTTTGATTTTTAAAATAAATATTGTATAAATAAAATAATTTAATATTTGCAACAGAATTAGTTACGAGTCTTATGACCTATTTCAAGTAGATAACTAAAGTTGTGATTACAATGAGTTAACGCCAAGTTGGGATATTCTAAGAAGACTGCCCAAATATGAGATTATTCTAATAAATTCCTCCTTTATTTATGAGATGAGAATTGAATTTGATTCCTCTCTTCTCCCATCTCCGTTGGAATTTATGCAGGGAAACACAGTTGCAGCCATGGGATCTTTTAAAGGATTGAAACAGGTCAGGAGAATTATAGAAGACTGCATACAGAATAAAATGCATCCAATATATCACATCAAGGTACAAACACTCGTCTGCTTCTCTTGTAAGATATGGTTGCTATTGTGTTTCTGTTTTCACCGAAGGAAAATAGTAATTTGGCAATTGCAGACTTGCAGTTGGATATTTGCTGTTGCGAATACCCATTTGTCAGTCATGTTATATACTTACACTATTCAATTTCACTGACAGATTCTCATGATGAAGAGGGAACTCGCAAAGGATCCTGCCCTTGCAAGTGAGAACTGGGATAGGTTTCTACCACAGTTCAAGAAGTATGACATTTGTTATCGCATGCAGTAGCAATTAGTGTTTATTCTTTAAAATGCATTGTTTACCTGATGGTCAATTTTTTTTCTCCTCTTGAATTCAGGAAAAATGTTCAGAAAAAGAAAGGCAAGGGTAAGGAGAAGAAACCTTACACACCGTTCCCACCTCCACAGCAGCCTAGCAAGGTGAGAATTTTATGGTCCTTGTAAATTTCTTGCTTGTAGACAATAATATGGTAATGGATAGCTTATCTATGTAAAAAAGCTGGTTTGATTGACGTTGAAAATATGATGTTCGGATACCTTCATTAACAAAACATTCAATGTAGATTGACCAACAATTGGAGACTGGAGAGTACTTCTTGAGTGAGGAAAAGAAGTCGGCGAAGATGTGGCAAGAGAAGGAGGTGAAACAGGCAGAGAAAACAGCTGAAAACAAAAGAAAAAGAGATGCTGCTTTTGTTCCACCTGAGGTTTGAGACGTTCAACTTGTCAGTGGAAATTGTTAATTCGGAATTTTTGCAAGATACTTAACACCATGTGCTATTATGTTATAGGAAACTACGGCGGAAGGTGATAAGAGTGCAACAGTTAGTAAAGGTGATGTCAGTTCCATGGCACAATCATTGAAGGTAATTGAGTAGAGCAATTTATTCTTGTTTAAACATCGTATGCTTTGCTATACTTGGTTAGTTGGTTTGACATCGAGTTGATGTTGTAATATTCTGCAGAAAAAAGCGAAAGAATTTGGAAAGAAGAAATCTGCCAACCACATAGATCCTCAAGCTTATATTGCTGGCTCCGAAGCACCGGCAAAGAAGAAGACCAAAAGCTCCAAATCTTGATCATTAATCCATATTTGTCAATTTTGATCTTAGTGAGACTGATTACATTATGTTGATGACTTGATATGATTGCAAAGTTCATAAAGTTTAACTTGACTTTATACTCTGAAATACTCTAATTTTCGTGCAATCAAAAGCCAATGTCTTCAATGCAAAGTTCTGTTTTTTTAATCAAATGTCATTTGGTGCGCAAAGGCTACACTTACCCTCAGTGTAAGTGGTCCCTTGGTACCCTTCCTTTTCATTGGCCATGTCCACATCAGATTTGCCACGTCAGAGCAAAATTTTCAAAACAAAAATTCAGTTTGATTTTGAATACGAAATTCAAACTAGGAAATTCTTTTCTCTTTATTTTCTTCGATGAAACCAATGTTTGTGATAAAAATTTCAGTCAGATCTATTCCTCCCCT

mRNA sequence

TAACATTCCTCCCTTGGCCGACCCCGTTTCACCGTTCCGTTTCCGTTTCCCTAGTTTATAAAGTTCGATTAACCGCTGTCTGTTCTCTCTCTCTCTTTCCCCTTCCTGACCTTGAGTTCCGCCTCCACCGCAGACATGGCAGACATAGAGCAGCAAAACAATGTCGATGAAGAAGTAGTACCAAAACAGAGGACTAAACACAAGGGTAAACACGATAAGGACAAGCCATGGGATGACCCCAGTATCGACCATTGGAAAATCGAAAAATTCGACCCTTCATGGAACGATTCTGGCTTGCTCGATGTCAGCTCTTTCTCTACTATCTTCCCCCAATACAGAGAGAAATATCTGCAAGATGTTTGGCCAACGGTAAAGGCTGCATTGCGGGAGCATGGTATTTCATGTGAGCTTAATTTGGTTGAAGGAACTATGACTGTTTCAACAACTAGAAAGACCAGAGATCCATACATTATAGTGAAAGCTAGGGACCTCATTAAACTTTTGTCGAGAAGTGTTCCGGCACCTCAGGCAATCAAGATACTTGATGACGAAATGCAATGTGATATCATCAAGATTGGTAATCTAGTGAGAAATAAGGCTCGCTTTGTGAAGCGGCGGCAACATCTTCTTGGTCCCAATAATTCTACCTTAAAGGCACTTGAAATCTTGACAGGCTGCTACATCCTTGTTCAGGGAAACACAGTTGCAGCCATGGGATCTTTTAAAGGATTGAAACAGGTCAGGAGAATTATAGAAGACTGCATACAGAATAAAATGCATCCAATATATCACATCAAGATTCTCATGATGAAGAGGGAACTCGCAAAGGATCCTGCCCTTGCAAGTGAGAACTGGGATAGGTTTCTACCACAGTTCAAGAAGAAAAATGTTCAGAAAAAGAAAGGCAAGGGTAAGGAGAAGAAACCTTACACACCGTTCCCACCTCCACAGCAGCCTAGCAAGATTGACCAACAATTGGAGACTGGAGAGTACTTCTTGAGTGAGGAAAAGAAGTCGGCGAAGATGTGGCAAGAGAAGGAGGTGAAACAGGCAGAGAAAACAGCTGAAAACAAAAGAAAAAGAGATGCTGCTTTTGTTCCACCTGAGGAAACTACGGCGGAAGGTGATAAGAGTGCAACAGTTAGTAAAGGTGATGTCAGTTCCATGGCACAATCATTGAAGAAAAAAGCGAAAGAATTTGGAAAGAAGAAATCTGCCAACCACATAGATCCTCAAGCTTATATTGCTGGCTCCGAAGCACCGGCAAAGAAGAAGACCAAAAGCTCCAAATCTTGATCATTAATCCATATTTGTCAATTTTGATCTTAGTGAGACTGATTACATTATGTTGATGACTTGATATGATTGCAAAGTTCATAAAGTTTAACTTGACTTTATACTCTGAAATACTCTAATTTTCGTGCAATCAAAAGCCAATGTCTTCAATGCAAAGTTCTGTTTTTTTAATCAAATGTCATTTGGTGCGCAAAGGCTACACTTACCCTCAGTGTAAGTGGTCCCTTGGTACCCTTCCTTTTCATTGGCCATGTCCACATCAGATTTGCCACGTCAGAGCAAAATTTTCAAAACAAAAATTCAGTTTGATTTTGAATACGAAATTCAAACTAGGAAATTCTTTTCTCTTTATTTTCTTCGATGAAACCAATGTTTGTGATAAAAATTTCAGTCAGATCTATTCCTCCCCT

Coding sequence (CDS)

ATGGCAGACATAGAGCAGCAAAACAATGTCGATGAAGAAGTAGTACCAAAACAGAGGACTAAACACAAGGGTAAACACGATAAGGACAAGCCATGGGATGACCCCAGTATCGACCATTGGAAAATCGAAAAATTCGACCCTTCATGGAACGATTCTGGCTTGCTCGATGTCAGCTCTTTCTCTACTATCTTCCCCCAATACAGAGAGAAATATCTGCAAGATGTTTGGCCAACGGTAAAGGCTGCATTGCGGGAGCATGGTATTTCATGTGAGCTTAATTTGGTTGAAGGAACTATGACTGTTTCAACAACTAGAAAGACCAGAGATCCATACATTATAGTGAAAGCTAGGGACCTCATTAAACTTTTGTCGAGAAGTGTTCCGGCACCTCAGGCAATCAAGATACTTGATGACGAAATGCAATGTGATATCATCAAGATTGGTAATCTAGTGAGAAATAAGGCTCGCTTTGTGAAGCGGCGGCAACATCTTCTTGGTCCCAATAATTCTACCTTAAAGGCACTTGAAATCTTGACAGGCTGCTACATCCTTGTTCAGGGAAACACAGTTGCAGCCATGGGATCTTTTAAAGGATTGAAACAGGTCAGGAGAATTATAGAAGACTGCATACAGAATAAAATGCATCCAATATATCACATCAAGATTCTCATGATGAAGAGGGAACTCGCAAAGGATCCTGCCCTTGCAAGTGAGAACTGGGATAGGTTTCTACCACAGTTCAAGAAGAAAAATGTTCAGAAAAAGAAAGGCAAGGGTAAGGAGAAGAAACCTTACACACCGTTCCCACCTCCACAGCAGCCTAGCAAGATTGACCAACAATTGGAGACTGGAGAGTACTTCTTGAGTGAGGAAAAGAAGTCGGCGAAGATGTGGCAAGAGAAGGAGGTGAAACAGGCAGAGAAAACAGCTGAAAACAAAAGAAAAAGAGATGCTGCTTTTGTTCCACCTGAGGAAACTACGGCGGAAGGTGATAAGAGTGCAACAGTTAGTAAAGGTGATGTCAGTTCCATGGCACAATCATTGAAGAAAAAAGCGAAAGAATTTGGAAAGAAGAAATCTGCCAACCACATAGATCCTCAAGCTTATATTGCTGGCTCCGAAGCACCGGCAAAGAAGAAGACCAAAAGCTCCAAATCTTGA

Protein sequence

MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSFSTIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKSANHIDPQAYIAGSEAPAKKKTKSSKS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo06838.1	Spo06838.1	mRNA

Homology

[Close]

BLAST of Spo06838.1 vs. NCBI nr
Match: gi|902169634|gb|KNA07686.1| (hypothetical protein SOVF_169610 [Spinacia oleracea])

HSP 1 Score: 752.7 bits (1942), Expect = 3.200e-214
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 1

		  
Query: 1   MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSF 60
           MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSF
Sbjct: 1   MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSF 60

Query: 61  STIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLI 120
           STIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLI
Sbjct: 61  STIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLI 120

Query: 121 KLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTG 180
           KLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTG
Sbjct: 121 KLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTG 180

Query: 181 CYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENW 240
           CYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENW
Sbjct: 181 CYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENW 240

Query: 241 DRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQE 300
           DRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQE
Sbjct: 241 DRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQE 300

Query: 301 KEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKS 360
           KEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKS
Sbjct: 301 KEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKS 360

Query: 361 ANHIDPQAYIAGSEAPAKKKTKSSKS 387
           ANHIDPQAYIAGSEAPAKKKTKSSKS
Sbjct: 361 ANHIDPQAYIAGSEAPAKKKTKSSKS 386

[Close]

BLAST of Spo06838.1 vs. NCBI nr
Match: gi|731325237|ref|XP_010673406.1| (PREDICTED: KRR1 small subunit processome component homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 662.9 bits (1709), Expect = 3.400e-187
Identity = 337/384 (87.76%), Postives = 363/384 (94.53%), Query Frame = 1

		  
Query: 4   IEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSFSTI 63
           +E Q+NVDE   PKQRTKHKGKHDKDKPWDDPSIDHWK+EKFDPSWN++G+L+VSSFSTI
Sbjct: 1   MEAQSNVDE--APKQRTKHKGKHDKDKPWDDPSIDHWKVEKFDPSWNETGMLEVSSFSTI 60

Query: 64  FPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLL 123
           FPQYREKYLQDVWPTVKAALREHGI+CELNLVEGTMTVSTTRKTRDPYIIVK+RDLIKLL
Sbjct: 61  FPQYREKYLQDVWPTVKAALREHGIACELNLVEGTMTVSTTRKTRDPYIIVKSRDLIKLL 120

Query: 124 SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI 183
           SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI
Sbjct: 121 SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI 180

Query: 184 LVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRF 243
           LVQGNTVA+MGSFKGLKQVRRI+EDCIQNKMHPIYHIKILMMK+ELAKDP L +ENWDRF
Sbjct: 181 LVQGNTVASMGSFKGLKQVRRIVEDCIQNKMHPIYHIKILMMKKELAKDPTLENENWDRF 240

Query: 244 LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEV 303
           LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAK WQEKEV
Sbjct: 241 LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKKWQEKEV 300

Query: 304 KQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKSANH 363
           KQAEK+AENKRKR+AAF+PPEE   +G KS+T  K DV++MAQSLK+KAKE  K+K+  +
Sbjct: 301 KQAEKSAENKRKREAAFIPPEEPVMQGHKSSTDDKTDVNAMAQSLKQKAKEIVKQKNVKN 360

Query: 364 IDPQAYIAGSEA-PAKKKTKSSKS 387
           +DPQAYIAGSEA P+KKK K SKS
Sbjct: 361 LDPQAYIAGSEAPPSKKKMKKSKS 382

[Close]

BLAST of Spo06838.1 vs. NCBI nr
Match: gi|731362939|ref|XP_010693157.1| (PREDICTED: KRR1 small subunit processome component homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 660.6 bits (1703), Expect = 1.700e-186
Identity = 337/384 (87.76%), Postives = 361/384 (94.01%), Query Frame = 1

		  
Query: 4   IEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSFSTI 63
           +E Q+NVDE   PKQRTKHKGKHDKDKPWDD SIDHWK+EKFDPSWN++G+L+VSSFSTI
Sbjct: 1   MEAQSNVDE--APKQRTKHKGKHDKDKPWDDSSIDHWKVEKFDPSWNETGMLEVSSFSTI 60

Query: 64  FPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLL 123
           FPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVK+RDLIKLL
Sbjct: 61  FPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKSRDLIKLL 120

Query: 124 SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI 183
           SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI
Sbjct: 121 SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI 180

Query: 184 LVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRF 243
           LVQGNTVA+MGSFKGLKQVRRI+EDCIQNKMHPIYHIKILMMK+ELAKDP L +ENWDRF
Sbjct: 181 LVQGNTVASMGSFKGLKQVRRIVEDCIQNKMHPIYHIKILMMKKELAKDPTLENENWDRF 240

Query: 244 LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEV 303
           LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAK WQEKEV
Sbjct: 241 LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKKWQEKEV 300

Query: 304 KQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKSANH 363
           KQAEK+AENKRKR+AAF+PPEE   +G KS T  K DV++MAQSLK+KAKE  K+K+  +
Sbjct: 301 KQAEKSAENKRKREAAFIPPEEPVMQGHKSTTDDKTDVNAMAQSLKQKAKEIVKQKNVKN 360

Query: 364 IDPQAYIAGSEA-PAKKKTKSSKS 387
           +DPQAYIAGSEA P+KKK K SKS
Sbjct: 361 LDPQAYIAGSEAPPSKKKMKKSKS 382

[Close]

BLAST of Spo06838.1 vs. NCBI nr
Match: gi|719981948|ref|XP_010250279.1| (PREDICTED: KRR1 small subunit processome component [Nelumbo nucifera])

HSP 1 Score: 591.3 bits (1523), Expect = 1.200e-165
Identity = 296/377 (78.51%), Postives = 341/377 (90.45%), Query Frame = 1

		  
Query: 11  DEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSFSTIFPQYREK 70
           D E +P  +TKHKGKHDK KPWDDPSIDHWKIEKFDPSWN+ G+L+VSSFST+FPQYREK
Sbjct: 64  DGEEMP--KTKHKGKHDKPKPWDDPSIDHWKIEKFDPSWNEGGMLEVSSFSTLFPQYREK 123

Query: 71  YLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAP 130
           YLQ+ WP VK AL+E+G++CELNLVEG+MTVSTTRKTRDPYII+KARDLIKLLSRSVPAP
Sbjct: 124 YLQEAWPIVKGALKEYGVACELNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSVPAP 183

Query: 131 QAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYILVQGNTV 190
           QA+KIL+DEMQCDIIKIG L+RNK RFVKRRQHLLGPN+STLKA+EILT CY+LVQGNTV
Sbjct: 184 QAVKILNDEMQCDIIKIGGLIRNKERFVKRRQHLLGPNSSTLKAIEILTKCYVLVQGNTV 243

Query: 191 AAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRFLPQFKKK 250
           AAMG FKGLKQVRRI+EDCIQNKMHP+YHIKILMMKREL K+PALA+ENWDRFLP+FKKK
Sbjct: 244 AAMGPFKGLKQVRRIVEDCIQNKMHPLYHIKILMMKRELEKNPALANENWDRFLPKFKKK 303

Query: 251 NVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEVKQAEKTA 310
           NVQKKK K KEKKPYTPFPPPQQPSKID QLE+GEYFLS++KKSAK WQEK+ KQAE+TA
Sbjct: 304 NVQKKKVKAKEKKPYTPFPPPQQPSKIDLQLESGEYFLSDKKKSAKKWQEKQEKQAERTA 363

Query: 311 ENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKSANHIDPQAYI 370
           ENKRKR+AAFVPP+E T E    ++  K DV++MA SLK+KAK+FGK+K+  +I+P+ YI
Sbjct: 364 ENKRKREAAFVPPKEPTREEHDKSSDEKNDVTAMAMSLKEKAKKFGKQKAVENINPETYI 423

Query: 371 AGSE-APAKKKTKSSKS 387
           A S+ AP+KKK + SKS
Sbjct: 424 ATSDKAPSKKKARHSKS 438

[Close]

BLAST of Spo06838.1 vs. NCBI nr
Match: gi|747083520|ref|XP_011089129.1| (PREDICTED: KRR1 small subunit processome component homolog [Sesamum indicum])

HSP 1 Score: 589.3 bits (1518), Expect = 4.700e-165
Identity = 300/387 (77.52%), Postives = 345/387 (89.15%), Query Frame = 1

		  
Query: 1   MADIEQQNN-VDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSS 60
           MAD E+ +N ++ E   K RT+HKGKHDKDKPWDDPSIDHWKIE FDPSWN+SG+L+VSS
Sbjct: 1   MADSEETDNKINGETEEKPRTRHKGKHDKDKPWDDPSIDHWKIEAFDPSWNESGMLEVSS 60

Query: 61  FSTIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDL 120
           FST+FPQYREKYLQ+ WP VK AL+EHG++CELNLVEG MTVSTTRKTRDPYIIVKARDL
Sbjct: 61  FSTLFPQYREKYLQECWPIVKGALKEHGVACELNLVEGCMTVSTTRKTRDPYIIVKARDL 120

Query: 121 IKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILT 180
           IKLLSRSVPAPQAIKIL+DEMQCDIIKIGNLVRNK RFVKRRQHL+GPN+STLKALEILT
Sbjct: 121 IKLLSRSVPAPQAIKILNDEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILT 180

Query: 181 GCYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASEN 240
           GCYILVQGNTVAAMGSFKGLKQVR+++EDCI NKMHP+Y+IKILMMKRELAKDP LA+EN
Sbjct: 181 GCYILVQGNTVAAMGSFKGLKQVRKVVEDCILNKMHPVYNIKILMMKRELAKDPTLANEN 240

Query: 241 WDRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQ 300
           WDRFLP+FKKKNV+++K K KEKKPYTPFPPPQQPSKID QLE+GEYFLS++KK AK WQ
Sbjct: 241 WDRFLPKFKKKNVKQRKVKTKEKKPYTPFPPPQQPSKIDMQLESGEYFLSDKKKQAKKWQ 300

Query: 301 EKEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKK 360
           EK+ KQAEKTAE+KR+R+ AFVPPEE T +  +++T  K DV+ +A SLK+KAKEFGK+K
Sbjct: 301 EKQEKQAEKTAESKRRREEAFVPPEELTKD-PRASTNDKNDVAQIALSLKRKAKEFGKRK 360

Query: 361 SANHIDPQAYIAGSEAPAKKKTKSSKS 387
           SA +ID + YIA SE  +  KTK  K+
Sbjct: 361 SAENIDAETYIAASEG-SSGKTKLKKN 385

[Close]

BLAST of Spo06838.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QM97_SPIOL (KRR1 small subunit processome component OS=Spinacia oleracea GN=SOVF_169610 PE=3 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 2.300e-214
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 1

		  
Query: 1   MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSF 60
           MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSF
Sbjct: 1   MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSF 60

Query: 61  STIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLI 120
           STIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLI
Sbjct: 61  STIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLI 120

Query: 121 KLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTG 180
           KLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTG
Sbjct: 121 KLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTG 180

Query: 181 CYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENW 240
           CYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENW
Sbjct: 181 CYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENW 240

Query: 241 DRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQE 300
           DRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQE
Sbjct: 241 DRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQE 300

Query: 301 KEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKS 360
           KEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKS
Sbjct: 301 KEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKS 360

Query: 361 ANHIDPQAYIAGSEAPAKKKTKSSKS 387
           ANHIDPQAYIAGSEAPAKKKTKSSKS
Sbjct: 361 ANHIDPQAYIAGSEAPAKKKTKSSKS 386

[Close]

BLAST of Spo06838.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CS22_BETVU (KRR1 small subunit processome component OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g065720 PE=3 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 2.300e-187
Identity = 337/384 (87.76%), Postives = 363/384 (94.53%), Query Frame = 1

		  
Query: 4   IEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSFSTI 63
           +E Q+NVDE   PKQRTKHKGKHDKDKPWDDPSIDHWK+EKFDPSWN++G+L+VSSFSTI
Sbjct: 1   MEAQSNVDE--APKQRTKHKGKHDKDKPWDDPSIDHWKVEKFDPSWNETGMLEVSSFSTI 60

Query: 64  FPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLL 123
           FPQYREKYLQDVWPTVKAALREHGI+CELNLVEGTMTVSTTRKTRDPYIIVK+RDLIKLL
Sbjct: 61  FPQYREKYLQDVWPTVKAALREHGIACELNLVEGTMTVSTTRKTRDPYIIVKSRDLIKLL 120

Query: 124 SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI 183
           SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI
Sbjct: 121 SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI 180

Query: 184 LVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRF 243
           LVQGNTVA+MGSFKGLKQVRRI+EDCIQNKMHPIYHIKILMMK+ELAKDP L +ENWDRF
Sbjct: 181 LVQGNTVASMGSFKGLKQVRRIVEDCIQNKMHPIYHIKILMMKKELAKDPTLENENWDRF 240

Query: 244 LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEV 303
           LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAK WQEKEV
Sbjct: 241 LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKKWQEKEV 300

Query: 304 KQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKSANH 363
           KQAEK+AENKRKR+AAF+PPEE   +G KS+T  K DV++MAQSLK+KAKE  K+K+  +
Sbjct: 301 KQAEKSAENKRKREAAFIPPEEPVMQGHKSSTDDKTDVNAMAQSLKQKAKEIVKQKNVKN 360

Query: 364 IDPQAYIAGSEA-PAKKKTKSSKS 387
           +DPQAYIAGSEA P+KKK K SKS
Sbjct: 361 LDPQAYIAGSEAPPSKKKMKKSKS 382

[Close]

BLAST of Spo06838.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BEF2_BETVU (KRR1 small subunit processome component OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g046250 PE=3 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 1.200e-186
Identity = 337/384 (87.76%), Postives = 361/384 (94.01%), Query Frame = 1

		  
Query: 4   IEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSFSTI 63
           +E Q+NVDE   PKQRTKHKGKHDKDKPWDD SIDHWK+EKFDPSWN++G+L+VSSFSTI
Sbjct: 1   MEAQSNVDE--APKQRTKHKGKHDKDKPWDDSSIDHWKVEKFDPSWNETGMLEVSSFSTI 60

Query: 64  FPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLL 123
           FPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVK+RDLIKLL
Sbjct: 61  FPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKSRDLIKLL 120

Query: 124 SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI 183
           SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI
Sbjct: 121 SRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYI 180

Query: 184 LVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRF 243
           LVQGNTVA+MGSFKGLKQVRRI+EDCIQNKMHPIYHIKILMMK+ELAKDP L +ENWDRF
Sbjct: 181 LVQGNTVASMGSFKGLKQVRRIVEDCIQNKMHPIYHIKILMMKKELAKDPTLENENWDRF 240

Query: 244 LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEV 303
           LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAK WQEKEV
Sbjct: 241 LPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKKWQEKEV 300

Query: 304 KQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKSANH 363
           KQAEK+AENKRKR+AAF+PPEE   +G KS T  K DV++MAQSLK+KAKE  K+K+  +
Sbjct: 301 KQAEKSAENKRKREAAFIPPEEPVMQGHKSTTDDKTDVNAMAQSLKQKAKEIVKQKNVKN 360

Query: 364 IDPQAYIAGSEA-PAKKKTKSSKS 387
           +DPQAYIAGSEA P+KKK K SKS
Sbjct: 361 LDPQAYIAGSEAPPSKKKMKKSKS 382

[Close]

BLAST of Spo06838.1 vs. UniProtKB/TrEMBL
Match: K4B7X7_SOLLC (KRR1 small subunit processome component OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 5.600e-165
Identity = 299/385 (77.66%), Postives = 342/385 (88.83%), Query Frame = 1

		  
Query: 1   MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSF 60
           MAD E+   V+EE++PK R  HKGKHDK KPWDD SIDHWKIEKFDPSWN SGLL+VSSF
Sbjct: 1   MAD-EENLTVNEELIPKPR--HKGKHDKPKPWDDESIDHWKIEKFDPSWNQSGLLEVSSF 60

Query: 61  STIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLI 120
           ST+FPQYREKYLQ+ WPTVK AL+EHGI+CELNLVEG+MTVSTT KTRDPYIIVKARDLI
Sbjct: 61  STLFPQYREKYLQECWPTVKGALKEHGIACELNLVEGSMTVSTTMKTRDPYIIVKARDLI 120

Query: 121 KLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTG 180
           KLLSRSVPAPQA+KIL+DEMQCDIIKIGN+VRNK RFVKRRQ+L+GPN+STLKALEILTG
Sbjct: 121 KLLSRSVPAPQAVKILNDEMQCDIIKIGNMVRNKERFVKRRQYLVGPNSSTLKALEILTG 180

Query: 181 CYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENW 240
           CYILVQGNTVAAMGSFKGLKQ RR+IEDCI NKMHP++HIKILM+KRELAK+PALASENW
Sbjct: 181 CYILVQGNTVAAMGSFKGLKQARRVIEDCILNKMHPLHHIKILMLKRELAKNPALASENW 240

Query: 241 DRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQE 300
           DRFLPQFKKKNV++KK + KEKKPYTPFPPPQ PSKIDQQLE+GEYFLS++KK AK W+E
Sbjct: 241 DRFLPQFKKKNVKQKKVQSKEKKPYTPFPPPQPPSKIDQQLESGEYFLSDKKKMAKQWEE 300

Query: 301 KEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKS 360
           K+VKQAEK AENK+KR+ AFVPPEE        + V K DV++MA SLK+KAKEF K+KS
Sbjct: 301 KQVKQAEKVAENKKKREEAFVPPEEPKTHNQDVSNVDKDDVTAMASSLKRKAKEFRKQKS 360

Query: 361 ANHIDPQAYIAGSEAPAKKKTKSSK 386
            + I+ + +IAG   P+KKK+KSS+
Sbjct: 361 IDKINAEEFIAGPSKPSKKKSKSSR 382

[Close]

BLAST of Spo06838.1 vs. UniProtKB/TrEMBL
Match: A0A0V0IFW6_SOLCH (KRR1 small subunit processome component OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 9.600e-165
Identity = 299/385 (77.66%), Postives = 341/385 (88.57%), Query Frame = 1

		  
Query: 1   MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSF 60
           MAD E+   V+EE++PK R  HKGKHDK KPWDD SIDHWKIEKFDPSWN SGLL+VSSF
Sbjct: 1   MAD-EENLTVNEELIPKPR--HKGKHDKPKPWDDESIDHWKIEKFDPSWNQSGLLEVSSF 60

Query: 61  STIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLI 120
           ST+FPQYREKYLQ+ WP VK AL+EHGI+CELNLVEG+MTVSTT KTRDPYIIVKARDLI
Sbjct: 61  STLFPQYREKYLQECWPNVKGALKEHGIACELNLVEGSMTVSTTMKTRDPYIIVKARDLI 120

Query: 121 KLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTG 180
           KLLSRSVPAPQA+KIL+DEMQCDIIKIGN+VRNK RFVKRRQ+L+GPN+STLKALEILTG
Sbjct: 121 KLLSRSVPAPQAVKILNDEMQCDIIKIGNMVRNKERFVKRRQYLVGPNSSTLKALEILTG 180

Query: 181 CYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENW 240
           CYILVQGNTVAAMGSFKGLKQ RR+IEDCI NKMHP++HIKILM+KRELAK+PALASENW
Sbjct: 181 CYILVQGNTVAAMGSFKGLKQARRVIEDCILNKMHPLHHIKILMLKRELAKNPALASENW 240

Query: 241 DRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQE 300
           DRFLPQFKKKNV++KK + KEKKPYTPFPPPQ PSKIDQQLE+GEYFLS++KK AK W+E
Sbjct: 241 DRFLPQFKKKNVKQKKVQSKEKKPYTPFPPPQPPSKIDQQLESGEYFLSDKKKMAKQWEE 300

Query: 301 KEVKQAEKTAENKRKRDAAFVPPEETTAEGDKSATVSKGDVSSMAQSLKKKAKEFGKKKS 360
           K+VKQAEK AENK+KR+ AFVPPEE        + V K DV++MA SLK+KAKEF K+KS
Sbjct: 301 KQVKQAEKVAENKKKREEAFVPPEEPKTHNQDVSNVDKDDVTAMALSLKRKAKEFRKQKS 360

Query: 361 ANHIDPQAYIAGSEAPAKKKTKSSK 386
            + ID + +IAG   P+KKK+KSS+
Sbjct: 361 IDKIDAEEFIAGPSKPSKKKSKSSR 382

[Close]

BLAST of Spo06838.1 vs. ExPASy Swiss-Prot
Match: KRR1_SCHPO (KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mis3 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 3.600e-104
Identity = 194/324 (59.88%), Postives = 250/324 (77.16%), Query Frame = 1

		  
Query: 5   EQQNNVDEEVVPKQRTKHKGKHDKDKPWDDPSIDHWKIEKFDPSWNDSGLLDVSSFSTIF 64
           E +++ +  V+  +  +++    +DKPWD   IDHWKIE F    +    L+ SSF+T+F
Sbjct: 3   EVESSTENNVIVNKNKRYR----RDKPWDTDDIDHWKIEPFTKDDSKESFLEESSFATLF 62

Query: 65  PQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLLS 124
           P+YREKYL++VWP V  AL + GI+C L+LVEG+MTV TTRKT DPY I+ ARDLIKLL+
Sbjct: 63  PKYREKYLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLA 122

Query: 125 RSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYIL 184
           RSVP PQA+KI+ D + CDIIKIGN++RNK RFVKRRQ L+G N  TLKALE+LT CYIL
Sbjct: 123 RSVPFPQAVKIMQDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYIL 182

Query: 185 VQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRFL 244
           VQG TVA MG +KGLK+VRRI+EDC+ N +HPIYHIK LM+KRELAKDP LA+E+WDRFL
Sbjct: 183 VQGTTVAVMGGYKGLKEVRRIVEDCMHN-IHPIYHIKELMIKRELAKDPTLANESWDRFL 242

Query: 245 PQFKKKNVQKKK-GKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEV 304
           PQFKK+NV ++K  K +E K YTPFPP Q PSK+D ++E+GEYFL +E+K  K   EK+ 
Sbjct: 243 PQFKKRNVARRKPAKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKE 302

Query: 305 KQAEKTAENKRKRDAAFVPPEETT 328
           +Q EK  E +++R  AF+PPEE++
Sbjct: 303 QQKEKKKEKEKERMKAFIPPEESS 321

[Close]

BLAST of Spo06838.1 vs. ExPASy Swiss-Prot
Match: KRR1_YEAS8 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.400e-100
Identity = 190/305 (62.30%), Postives = 234/305 (76.72%), Query Frame = 1

		  
Query: 26  HDKDKPWDDPSIDHWKIEKFDPSWNDSG--LLDVSSFSTIFPQYREKYLQDVWPTVKAAL 85
           H++DKPWD   ID WKIE+F    N SG    + SSF T+FP+YRE YL+ +W  V  AL
Sbjct: 5   HNRDKPWDTDDIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRAL 64

Query: 86  REHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCD 145
            +H I+C L+LVEG+MTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M CD
Sbjct: 65  DKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACD 124

Query: 146 IIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR 205
           +IKIGN V NK RFVKRRQ L+GPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+VR
Sbjct: 125 VIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVR 184

Query: 206 RIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRFLPQFKKKNVQKKKGK---GK 265
           R++EDC++N +HPIYHIK LM+KRELAK P LA+E+W RFLP FKK+NV +KK K     
Sbjct: 185 RVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNV 244

Query: 266 EKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEVKQAEKTAENKRKRDAAF 325
           EKK YTPFPP Q P K+D ++E+GEYFLS+ +K  K   E++ KQ E+  E + +R   F
Sbjct: 245 EKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKDF 304

[Close]

BLAST of Spo06838.1 vs. ExPASy Swiss-Prot
Match: KRR1_YEAS1 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11-1a) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.400e-100
Identity = 190/305 (62.30%), Postives = 234/305 (76.72%), Query Frame = 1

		  
Query: 26  HDKDKPWDDPSIDHWKIEKFDPSWNDSG--LLDVSSFSTIFPQYREKYLQDVWPTVKAAL 85
           H++DKPWD   ID WKIE+F    N SG    + SSF T+FP+YRE YL+ +W  V  AL
Sbjct: 5   HNRDKPWDTDDIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRAL 64

Query: 86  REHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCD 145
            +H I+C L+LVEG+MTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M CD
Sbjct: 65  DKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACD 124

Query: 146 IIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR 205
           +IKIGN V NK RFVKRRQ L+GPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+VR
Sbjct: 125 VIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVR 184

Query: 206 RIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRFLPQFKKKNVQKKKGK---GK 265
           R++EDC++N +HPIYHIK LM+KRELAK P LA+E+W RFLP FKK+NV +KK K     
Sbjct: 185 RVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNV 244

Query: 266 EKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEVKQAEKTAENKRKRDAAF 325
           EKK YTPFPP Q P K+D ++E+GEYFLS+ +K  K   E++ KQ E+  E + +R   F
Sbjct: 245 EKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKDF 304

[Close]

BLAST of Spo06838.1 vs. ExPASy Swiss-Prot
Match: KRR1_YEAS6 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI1631) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.400e-100
Identity = 190/305 (62.30%), Postives = 234/305 (76.72%), Query Frame = 1

		  
Query: 26  HDKDKPWDDPSIDHWKIEKFDPSWNDSG--LLDVSSFSTIFPQYREKYLQDVWPTVKAAL 85
           H++DKPWD   ID WKIE+F    N SG    + SSF T+FP+YRE YL+ +W  V  AL
Sbjct: 5   HNRDKPWDTDDIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRAL 64

Query: 86  REHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCD 145
            +H I+C L+LVEG+MTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M CD
Sbjct: 65  DKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACD 124

Query: 146 IIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR 205
           +IKIGN V NK RFVKRRQ L+GPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+VR
Sbjct: 125 VIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVR 184

Query: 206 RIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRFLPQFKKKNVQKKKGK---GK 265
           R++EDC++N +HPIYHIK LM+KRELAK P LA+E+W RFLP FKK+NV +KK K     
Sbjct: 185 RVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNV 244

Query: 266 EKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEVKQAEKTAENKRKRDAAF 325
           EKK YTPFPP Q P K+D ++E+GEYFLS+ +K  K   E++ KQ E+  E + +R   F
Sbjct: 245 EKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKDF 304

[Close]

BLAST of Spo06838.1 vs. ExPASy Swiss-Prot
Match: KRR1_YEAST (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRR1 PE=1 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.400e-100
Identity = 190/305 (62.30%), Postives = 234/305 (76.72%), Query Frame = 1

		  
Query: 26  HDKDKPWDDPSIDHWKIEKFDPSWNDSG--LLDVSSFSTIFPQYREKYLQDVWPTVKAAL 85
           H++DKPWD   ID WKIE+F    N SG    + SSF T+FP+YRE YL+ +W  V  AL
Sbjct: 5   HNRDKPWDTDDIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRAL 64

Query: 86  REHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCD 145
            +H I+C L+LVEG+MTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M CD
Sbjct: 65  DKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACD 124

Query: 146 IIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR 205
           +IKIGN V NK RFVKRRQ L+GPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+VR
Sbjct: 125 VIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVR 184

Query: 206 RIIEDCIQNKMHPIYHIKILMMKRELAKDPALASENWDRFLPQFKKKNVQKKKGK---GK 265
           R++EDC++N +HPIYHIK LM+KRELAK P LA+E+W RFLP FKK+NV +KK K     
Sbjct: 185 RVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNV 244

Query: 266 EKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQEKEVKQAEKTAENKRKRDAAF 325
           EKK YTPFPP Q P K+D ++E+GEYFLS+ +K  K   E++ KQ E+  E + +R   F
Sbjct: 245 EKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKDF 304

[Close]

BLAST of Spo06838.1 vs. TAIR (Arabidopsis)
Match: AT5G08420.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 518.8 bits (1335), Expect = 2.800e-147
Identity = 265/390 (67.95%), Postives = 326/390 (83.59%), Query Frame = 1

		  
Query: 1   MADIEQQNNVDEEVVPKQRTKHKGKHDKDKPWDD-PSIDHWKIEKFDPSWNDSGLLDVSS 60
           MA++E+  + ++ +  ++R K KGKH+K KPWDD P+ID W IEKFDP+WN +G+ + S+
Sbjct: 1   MAEVEEIAHEEQNI--EKREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETST 60

Query: 61  FSTIFPQYREKYLQDVWPTVKAALREHGISCELNLVEGTMTVSTTRKTRDPYIIVKARDL 120
           FST+FPQYREKYLQ+ WP V++AL+E+G++C+LNLVEG+MTVSTTRKTRDPYIIVKARDL
Sbjct: 61  FSTLFPQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDL 120

Query: 121 IKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKARFVKRRQHLLGPNNSTLKALEILT 180
           IKLLSRSVPAPQAIKIL+DE+QCDIIKIGNLVRNK RFVKRRQ L+GPN+STLKALEILT
Sbjct: 121 IKLLSRSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILT 180

Query: 181 GCYILVQGNTVAAMGSFKGLKQVRRIIEDCIQNKMHPIYHIKILMMKRELAKDPALASEN 240
            CYILVQG+TVAAMG FKGLKQ+RRI+EDC+QN MHP+YHIK LMMK+EL KDPALA+E+
Sbjct: 181 NCYILVQGSTVAAMGPFKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANES 240

Query: 241 WDRFLPQFKKKNVQKKKGKGKEKKPYTPFPPPQQPSKIDQQLETGEYFLSEEKKSAKMWQ 300
           WDRFLP F+KKNV++KK K KEKKPYTPFPPPQ PSKID QLE+GEYF+S++KKS K WQ
Sbjct: 241 WDRFLPTFRKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWQ 300

Query: 301 EKEVKQAEKTAENKRKRDAAFVPPEE---TTAEGDKSATVSKGDVSSMAQSLKKKAKEFG 360
           EK+ KQ+EK+ ENKRKRDA+F+PPEE     +  +KS    K D++ +  SLK K KE  
Sbjct: 301 EKQEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSED-GKNDITELTNSLKSKTKELK 360

Query: 361 K-KKSANHIDPQAYIAGSEAPAKKKTKSSK 386
           K KK+   ++ + YIAG  + A K +K SK
Sbjct: 361 KQKKTHERVNAEEYIAGPSSSADKSSKKSK 387

The following BLAST results are available for this feature:

BLAST of Spo06838.1 vs. NCBI nr
BLAST of Spo06838.1 vs. UniProtKB/TrEMBL
BLAST of Spo06838.1 vs. ExPASy Swiss-Prot
BLAST of Spo06838.1 vs. TAIR (Arabidopsis)

BLAST of Spo06838.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902169634\|gb\|KNA07686.1\|	3.2e-214	100.	hypothetical protein SOVF_1696...	[more]
gi\|731325237\|ref\|XP_010673406.1\|	3.4e-187	87.7	PREDICTED: KRR1 small subunit ...	[more]
gi\|731362939\|ref\|XP_010693157.1\|	1.7e-186	87.7	PREDICTED: KRR1 small subunit ...	[more]
gi\|719981948\|ref\|XP_010250279.1\|	1.2e-165	78.5	PREDICTED: KRR1 small subunit ...	[more]
gi\|747083520\|ref\|XP_011089129.1\|	4.7e-165	77.5	PREDICTED: KRR1 small subunit ...	[more]

BLAST of Spo06838.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QM97_SPIOL	2.3e-214	100.	KRR1 small subunit processome ...	[more]
A0A0J8CS22_BETVU	2.3e-187	87.7	KRR1 small subunit processome ...	[more]
A0A0J8BEF2_BETVU	1.2e-186	87.7	KRR1 small subunit processome ...	[more]
K4B7X7_SOLLC	5.6e-165	77.6	KRR1 small subunit processome ...	[more]
A0A0V0IFW6_SOLCH	9.6e-165	77.6	KRR1 small subunit processome ...	[more]

BLAST of Spo06838.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
KRR1_SCHPO	3.6e-104	59.8	KRR1 small subunit processome ...	[more]
KRR1_YEAS8	1.4e-100	62.3	KRR1 small subunit processome ...	[more]
KRR1_YEAS1	1.4e-100	62.3	KRR1 small subunit processome ...	[more]
KRR1_YEAS6	1.4e-100	62.3	KRR1 small subunit processome ...	[more]
KRR1_YEAST	1.4e-100	62.3	KRR1 small subunit processome ...	[more]

BLAST of Spo06838.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT5G08420.1	2.8e-147	67.9	RNA-binding KH domain-containi...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 141..211 score: 0.
IPR004088	K Homology domain, type 1	GENE3D	3.30.1370.10		coord: 139..215 score: 1.
IPR004088	K Homology domain, type 1	unknown	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 139..244 score: 9.81
IPR024166	Ribosomal RNA assembly KRR1	PIR	PIRSF006515	KRR1	coord: 5..362 score: 2.7E
IPR024166	Ribosomal RNA assembly KRR1	PANTHER	PTHR12581	HIV-1 REV BINDING PROTEIN 2, 3	coord: 5..386 score: 1.3E
None	No IPR available	unknown	Coil	Coil	coord: 296..316 scor

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0006396	RNA processing
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006366	transcription by RNA polymerase II
biological_process	GO:0018108	peptidyl-tyrosine phosphorylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0043087	regulation of GTPase activity
biological_process	GO:0032781	positive regulation of ATPase activity
biological_process	GO:0009816	defense response to bacterium, incompatible interaction
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005736	DNA-directed RNA polymerase I complex
cellular_component	GO:0005665	DNA-directed RNA polymerase II, core complex
cellular_component	GO:0005666	DNA-directed RNA polymerase III complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000418	DNA-directed RNA polymerase IV complex
cellular_component	GO:0000419	DNA-directed RNA polymerase V complex
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0001056	RNA polymerase III activity
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0001054	RNA polymerase I activity
molecular_function	GO:0001055	RNA polymerase II activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004715	non-membrane spanning protein tyrosine kinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0001671	ATPase activator activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01202	0.80	Barchart \| Table
Spo19839	0.76	Barchart \| Table
Spo13184	0.75	Barchart \| Table
Spo18046	0.74	Barchart \| Table
Spo00396	0.73	Barchart \| Table
Spo11339	0.72	Barchart \| Table
Spo16035	0.72	Barchart \| Table
Spo15643	0.72	Barchart \| Table
Spo26267	0.71	Barchart \| Table
Spo04300	0.71	Barchart \| Table
Spo15406	0.71	Barchart \| Table
Spo17199	0.71	Barchart \| Table
Spo24607	0.71	Barchart \| Table
Spo06919	0.70	Barchart \| Table
Spo24133	0.70	Barchart \| Table
Spo09681	0.70	Barchart \| Table
Spo09717	0.70	Barchart \| Table
Spo04101	0.70	Barchart \| Table
Spo01132	0.70	Barchart \| Table
Spo25582	0.69	Barchart \| Table
Spo20148	0.69	Barchart \| Table
Spo10449	0.69	Barchart \| Table
Spo08654	0.69	Barchart \| Table
Spo06852	0.68	Barchart \| Table
Spo11923	0.68	Barchart \| Table
Spo25866	0.68	Barchart \| Table
Spo03901	0.67	Barchart \| Table
Spo02740	0.67	Barchart \| Table
Spo18468	0.67	Barchart \| Table
Spo18997	0.67	Barchart \| Table
Spo09180	0.67	Barchart \| Table
Spo08169	0.67	Barchart \| Table
Spo11960	0.67	Barchart \| Table
Spo24993	0.66	Barchart \| Table
Spo01727	0.66	Barchart \| Table
Spo02954	0.66	Barchart \| Table
Spo05496	0.66	Barchart \| Table
Spo17665	0.66	Barchart \| Table
Spo24509	0.66	Barchart \| Table
Spo22879	0.66	Barchart \| Table
Spo02982	0.66	Barchart \| Table
Spo04790	0.65	Barchart \| Table
Spo20369	0.65	Barchart \| Table
Spo07891	0.65	Barchart \| Table
Spo04907	0.65	Barchart \| Table