Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTTCGCATATGTATGGTGTAAGGAGGGAGAGGAGATATGGAGGCTGCGGGTATAACACTGTAACAGGGATGAAGAATTGAAGACAAACCTTTTTTACCATTTACTTATATTTTTTAAAAATAAATAAATCTGGCCCACTATTCACCTTCTGCCTTTCCTTTTTCTTTTTCTGTGCACCTTTTCCTTATAAAAACACATTTCCCACCTTACTCTTTAGAGATAAGATGTTTGATATTTTTGTGGCGTGTTTTGAAGGGGGAAATTAACTATTTTGAAGATGTATGCAACTTTTTTTTTCTTAAGCATCCCGCTTGGGGGGTAGTGGGAGGGAAACTCTGGAGTCTTTGGCTAGAATTAATCCCTCATCTTGAGGAAGGGAAGTAAAAGGTCTATCTCTCTTGATTCTTGCTTAAAATTGTCTGGGGAGGGTGTTTGTTTTGTGTGATTTTCATGCACCTTTTGGTCCTTGGAGATGGTTTCTAACTTAACTTACAGTAGCTTCCGCTGATGTACTGTTGTGGTTGTCCATTGATTACGTTTTTTTTTGGGTTTCAGAAATTCCTAGTTCAGGGATGTTTTACTTTTGTAGCTGTTCGTTAATATTATTATTTTACTTAAAAAGATAAGTCGCTGATAAAAAATATCTCATTAGCATGGACATGTATGACCTGAGAGGTCTAAAGTGTGTTGTTTTATTTATTTATTTTCTTTGGTTCACCTTTTGTTGTACATTGCTTCTTTCGCTTCCCTTTTTTTAGCAGCAGTCAATTCTTTTGCTTGTAAGAGACTGCTAATACTCATTCTTGTTGTTACCTTGCAATAAAATGTAGTCTTATATATCTTAAAAATCTTATCTTTTGCATTAGTACTTCTCATAAAAAGGGGGAATATGAGACTTAATTATATTTATTTTGAGTTCATCCAATTTACTTAAATTCTTCAAAAGAAAAAAAAATACACAAGTTCTCTTACTAAATTAGGGGAAAGTTAATGTGGCTTGCTGCCTTGTGGCCTCCTATTGAGTGACTAAGGATTGATTCTAGTTCTACCGGATGATTGCAATTGTATTTAAGTGTTTTTTGCCGAAAATGGCTATGATGAATTTCTTAAGCATAATTTCAGTCTCATCGTGGCCTCAATCATAGTATTTGTGTTGTCGGGGTGGCCTTTTTAATCCTAAAAAACCGTTGGAAAACCTGTTTCAGTGATGTATCAGGGTTACGTCCGACCTATGTTACTCGGAGTCTCGGACTCTGATACCTGTGTTTGACTTGGGGTCTAACTTGTACTAGTGTCAGACTCAACTATTTGAAGAGAACGTTCTTTGTCCAAATTGATAGGTACTTTAACAGAAGTGAAATGTTTGATCAAACATAGCTTCCAATCGTCAGATGCTTGATTAGATGCTTAATTGATAAAATTCGAGATTAAAGAAGTTTAGCATCTTTTAGGTGGCCACTTTTCTGTCAATCTAGTTGATATTGGTGGGGTAAGAAAGCATTGCAGTTTTTACAGTGATGCATTTTGATTTCTTACTGGATATGTGATGGGAATTATAATTGCATCTGGGTACTGGTGTGATGCCTGTTGTCTATTTTTTACTCCCTTTAATTCATCTAATGAATAGAGCTTCATAAAGAACAATTAATGAGTCTTGACTCAATTTTCTTCAGGATCACCTAGCCCTGATGATGGAGCTCATGGGAATGATGCCACGCAAGGTTAGAATATATAATACCTACTTTCAAGGAAAATTTCATGTACTTCCTCTGTTCTGTTTTAGTTGCAACCTTTACTGTTCACCTCAATTTTTGAATGCAAGTAGAAATGCAGTGGAGTAAATTACATACATGTCTCATTTTTAGATATGATTAGGAAAAACTATGAGTTACTGGGTATGGATAAGGGTAGTTTGGTAAAATTAAGTGGGTAAAGTTACCAAAAGTAGAAAGGTTGCAACTAAAAAGAAACGGCCGAAAATAGAAATGTTGCAACTAAAAAGAAACGGCCGAAAATAGAAATGTTGCAACTAAAGGAAATATATTCTAAGCTGTGAAATCATTATCAATCATTTCCAGATTGCGTTAGGGGGTCGTTATTCTCGGGACTTCTTCAACAGATATGGAGACTTGCGACATATTCGCCGGCTTCGATTCTGGCCATTAAACAAGGTTCTTGTGGAGAAGTACGAGTTCAATGAAAAAGATGCAAATGATCTGGCAGAATTTCTAATTCCAATTCTTGATTTTGTCCCTGACAAGCGTCCCTCTGCTGGTGAATGCCTTTCACATCCGTGGATTGCTGGAGGCCTTACTGGTCTAAAGGCTTCTCCACCTGAAAGCCAAGAAGTTGATGTTACTATTACAGATAAAAAGAAGAAAGAAAAGGATGAAAGAGAAGCAATGGAGAAAGGCATGGGGAGTATTGCTATCACTATAGACTCAAAGCCAAGCAAACAACCTCTTTCTTCTCCTAAACCTTCAAAAGCAGCTGTAATTGGTTCATCC ATGGTGTTCGCATATGTATGGTGTAAGGAGGGAGAGGAGATATGGAGGCTGCGGGATCACCTAGCCCTGATGATGGAGCTCATGGGAATGATGCCACGCAAGATTGCGTTAGGGGGTCGTTATTCTCGGGACTTCTTCAACAGATATGGAGACTTGCGACATATTCGCCGGCTTCGATTCTGGCCATTAAACAAGGTTCTTGTGGAGAAGTACGAGTTCAATGAAAAAGATGCAAATGATCTGGCAGAATTTCTAATTCCAATTCTTGATTTTGTCCCTGACAAGCGTCCCTCTGCTGGTGAATGCCTTTCACATCCGTGGATTGCTGGAGGCCTTACTGGTCTAAAGGCTTCTCCACCTGAAAGCCAAGAAGTTGATGTTACTATTACAGATAAAAAGAAGAAAGAAAAGGATGAAAGAGAAGCAATGGAGAAAGGCATGGGGAGTATTGCTATCACTATAGACTCAAAGCCAAGCAAACAACCTCTTTCTTCTCCTAAACCTTCAAAAGCAGCTGTAATTGGTTCATCC ATGGTGTTCGCATATGTATGGTGTAAGGAGGGAGAGGAGATATGGAGGCTGCGGGATCACCTAGCCCTGATGATGGAGCTCATGGGAATGATGCCACGCAAGATTGCGTTAGGGGGTCGTTATTCTCGGGACTTCTTCAACAGATATGGAGACTTGCGACATATTCGCCGGCTTCGATTCTGGCCATTAAACAAGGTTCTTGTGGAGAAGTACGAGTTCAATGAAAAAGATGCAAATGATCTGGCAGAATTTCTAATTCCAATTCTTGATTTTGTCCCTGACAAGCGTCCCTCTGCTGGTGAATGCCTTTCACATCCGTGGATTGCTGGAGGCCTTACTGGTCTAAAGGCTTCTCCACCTGAAAGCCAAGAAGTTGATGTTACTATTACAGATAAAAAGAAGAAAGAAAAGGATGAAAGAGAAGCAATGGAGAAAGGCATGGGGAGTATTGCTATCACTATAGACTCAAAGCCAAGCAAACAACCTCTTTCTTCTCCTAAACCTTCAAAAGCAGCTGTAATTGGTTCATCC MVFAYVWCKEGEEIWRLRDHLALMMELMGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLVEKYEFNEKDANDLAEFLIPILDFVPDKRPSAGECLSHPWIAGGLTGLKASPPESQEVDVTITDKKKKEKDEREAMEKGMGSIAITIDSKPSKQPLSSPKPSKAAVIGSS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06884.1 vs. NCBI nr
Match: gi|902217734|gb|KNA17863.1| (hypothetical protein SOVF_075680 [Spinacia oleracea]) HSP 1 Score: 321.2 bits (822), Expect = 1.100e-84 Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 1
BLAST of Spo06884.1 vs. NCBI nr
Match: gi|731345451|ref|XP_010683926.1| (PREDICTED: serine/threonine-protein kinase SRPK [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 275.0 bits (702), Expect = 9.100e-71 Identity = 137/167 (82.04%), Postives = 150/167 (89.82%), Query Frame = 1
BLAST of Spo06884.1 vs. NCBI nr
Match: gi|870854640|gb|KMT06395.1| (hypothetical protein BVRB_7g160730 isoform A [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 275.0 bits (702), Expect = 9.100e-71 Identity = 137/167 (82.04%), Postives = 150/167 (89.82%), Query Frame = 1
BLAST of Spo06884.1 vs. NCBI nr
Match: gi|870854641|gb|KMT06396.1| (hypothetical protein BVRB_7g160730 isoform B [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 275.0 bits (702), Expect = 9.100e-71 Identity = 137/167 (82.04%), Postives = 150/167 (89.82%), Query Frame = 1
BLAST of Spo06884.1 vs. NCBI nr
Match: gi|720072163|ref|XP_010278279.1| (PREDICTED: serine/threonine-protein kinase SRPK isoform X1 [Nelumbo nucifera]) HSP 1 Score: 232.6 bits (592), Expect = 5.200e-58 Identity = 117/169 (69.23%), Postives = 139/169 (82.25%), Query Frame = 1
BLAST of Spo06884.1 vs. UniProtKB/TrEMBL
Match: A0A0K9REG8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_075680 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 7.700e-85 Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 1
BLAST of Spo06884.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ET81_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g160730 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 6.300e-71 Identity = 137/167 (82.04%), Postives = 150/167 (89.82%), Query Frame = 1
BLAST of Spo06884.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXY7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g160730 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 6.300e-71 Identity = 137/167 (82.04%), Postives = 150/167 (89.82%), Query Frame = 1
BLAST of Spo06884.1 vs. UniProtKB/TrEMBL
Match: B9SRL4_RICCO (Srpk, putative OS=Ricinus communis GN=RCOM_0840470 PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.000e-57 Identity = 117/168 (69.64%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of Spo06884.1 vs. UniProtKB/TrEMBL
Match: F6HKF5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g04220 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 4.000e-57 Identity = 114/164 (69.51%), Postives = 135/164 (82.32%), Query Frame = 1
BLAST of Spo06884.1 vs. ExPASy Swiss-Prot
Match: SRPK2_MOUSE (SRSF protein kinase 2 OS=Mus musculus GN=Srpk2 PE=1 SV=2) HSP 1 Score: 122.9 bits (307), Expect = 3.600e-27 Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 1
BLAST of Spo06884.1 vs. ExPASy Swiss-Prot
Match: SRPK2_HUMAN (SRSF protein kinase 2 OS=Homo sapiens GN=SRPK2 PE=1 SV=3) HSP 1 Score: 122.9 bits (307), Expect = 3.600e-27 Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 1
BLAST of Spo06884.1 vs. ExPASy Swiss-Prot
Match: SRPK1_HUMAN (SRSF protein kinase 1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2) HSP 1 Score: 121.3 bits (303), Expect = 1.000e-26 Identity = 49/98 (50.00%), Postives = 77/98 (78.57%), Query Frame = 1
BLAST of Spo06884.1 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (SRSF protein kinase 1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2) HSP 1 Score: 121.3 bits (303), Expect = 1.000e-26 Identity = 49/98 (50.00%), Postives = 77/98 (78.57%), Query Frame = 1
BLAST of Spo06884.1 vs. ExPASy Swiss-Prot
Match: SRPK1_MOUSE (SRSF protein kinase 1 OS=Mus musculus GN=Srpk1 PE=1 SV=2) HSP 1 Score: 118.2 bits (295), Expect = 8.900e-26 Identity = 48/98 (48.98%), Postives = 76/98 (77.55%), Query Frame = 1
BLAST of Spo06884.1 vs. TAIR (Arabidopsis)
Match: AT3G53030.1 (ser/arg-rich protein kinase 4) HSP 1 Score: 198.0 bits (502), Expect = 5.000e-51 Identity = 98/156 (62.82%), Postives = 122/156 (78.21%), Query Frame = 1
BLAST of Spo06884.1 vs. TAIR (Arabidopsis)
Match: AT3G44850.1 (Protein kinase superfamily protein) HSP 1 Score: 186.0 bits (471), Expect = 2.000e-47 Identity = 91/148 (61.49%), Postives = 114/148 (77.03%), Query Frame = 1
BLAST of Spo06884.1 vs. TAIR (Arabidopsis)
Match: AT5G22840.1 (Protein kinase superfamily protein) HSP 1 Score: 179.5 bits (454), Expect = 1.800e-45 Identity = 90/145 (62.07%), Postives = 113/145 (77.93%), Query Frame = 1
BLAST of Spo06884.1 vs. TAIR (Arabidopsis)
Match: AT2G17530.1 (Protein kinase superfamily protein) HSP 1 Score: 138.7 bits (348), Expect = 3.600e-33 Identity = 57/100 (57.00%), Postives = 80/100 (80.00%), Query Frame = 1
BLAST of Spo06884.1 vs. TAIR (Arabidopsis)
Match: AT4G35500.2 (Protein kinase superfamily protein) HSP 1 Score: 137.5 bits (345), Expect = 8.000e-33 Identity = 57/100 (57.00%), Postives = 80/100 (80.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06884.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06884.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06884.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo06884.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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