Spo06916 (gene)

Overview
NameSpo06916
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein
Locationchr3 : 24466680 .. 24471203 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGATTTGATAACATATACTTCTTGCATTTTCAATTTTATTTGGGTAATTCAATTCCATACCAAAACGATGGCTTGTTCTCATTCTCACTTGCTCTTCTACCCATTCACCTCTCTCAAAGATAAACTTACACTACATTACACCAAATTTCCAGAAAACCCCACAAATTTCGCAGCGCAGAAACTCACACCCAGATTCAATTCATCATTTTCCACTACACAAATTACAGGAAATGCAGAAGTAATTCAGGAACCCAAAGAGCGACAGAAATTCAGATGGGTGGTAATAAACCCAGAAAAGGTTACAGAATCACAAAAACTTGCAATTTCTAGATTACCCAAGAAAATGGAGAAAAGATGTACTGCAGTAATGAAGCAGATTATCTGCTTTTCACCTGAAAAGGGTAATCTGTCTGATTTGCTGGGTGCTTGGGTGAAGATTATGAAGCCCAGAAGAGCTGATTGGCTTGCAATTCTTAAGGAATTATGCTTTATGGATCATCCGTTGTTTTTTGAGGTATAAATTATTGCCATTTGAATGAATTTTTGGGCTTTTTTTTTCTTCTTGTATATGGTATTTGCAAGCTTTTGAATTGAAATTATGGCTCGTTTTGTAAGCGGTAATAGTTACAGTAATGGGAATGTATTTATATGTGATTTTGTAAATTAATGCTAAATTGGTAACGCAACTCTGTCCCAGGACTTGTTTTTTCATACCATAAGGATGATTATGAAACTTACCGAAAATAAAGAGATACTTTGGGGTGGACCAGCATTACCACTGACGTTTTTGTATGAGAATTTCCGTTACCGCCTACCAAACAGACTGTTAAGGAGGTTTGCCCAAATCAACTATTATCACATAGTTTCTGAAATTTTGGGATGGGTGAACTATAGGAAATTTTGTTATGGTATTGTAGAAGGAACAACATTAGCATGTTGGCTTAGAAGTGGTGTCTTCCAGATATAGACACGAATACGGTGGCAACTGCTATAGCTTGTCATTGTAACACTGTTATGATCAATCATCAATATGCAACCTATTGGTTCTGAGTATTTATGTAAACGATCTTGGCATTTAACCATGAGAGTGGGATAAAGAGGAGAGGAGTGGTTGGAATCGCTACAACAATTGGACAGTGTATAATATGCGGCAAAGAGCTATGAAAGTAAGAAGGATCAAGAGTCTCTGTGTGCTGTCTTAGGCTCCGTTTGGTAGGGCGTAAAACGTTTTCATTGTAAAATGATTTTCCATGTAAAACAATTTTCAAGGGAAAACACAATTTCAAACTAGTTTTCCTTTGTTTGGTACCTTAAAGGAAAATGGGAGGAGATGGTGAAGATTGAGGGGAAAAAAGGAGAGGGAGGTAAGGAGGAAAGAAGGAAAAATGGTTTCCCTCCCTTTCAAATGGAAAATGGTTTTCCGCCTTGGAGGGAGTGATGGAAAATTGTTTTCCATCCCTTACCCAACCAAATAACGTAAAATGGTTGAAAAAGGGAAAATCGTTTTCCATGAAAATGTTTTACGCCCTACCAAACGGAGCCTTATAACGAAACTAATGAAAAGAAACTCCTTGACTCCTTGTTACATCTCGGTTGCTATTTCACAGGCACATTTCTCTCTATATTTCTTCAATTCTTAGCAATTTTCTGTCACATGACTTTGCTGGGAAAACAATGATATTTTGAGCCCCTGCTGCCACCACAAGGCAATGAAAACGAGAGGAATTTTGCTAGGTAATGCACTTACAAAACCTTCCTGTATGCGAGAAACTTGCTCCTTTGTGTTTAGGGGAGATTTGTGTGTGTGTGTGTGTGTGTGTGTTGGGGAGGGGGGAGATAAGAGATTTTAGTATGACGTCTTGCAATTGCAAAAGAACTGAGAACTAAAAGGTTCCAAGTTGCAATCAATTTTGAAGTTTGAAAAGATTATAATACCTCAGCACAGCCATCAGTTTGAAAAGATTTGACTGTCCCTTATAAAGTAAATACTACAAAAATTTTTTCTTTTTTTTTAAAAATATGTAATACGAAGTATTACACTTGCAACTTGAATGCACAGCCATTTGGGTCTGAGTGTGCATTTTTCTAATATCCTTTTTGTGTAGGCATGTAGCAAACAATATGAGATGACTCGTAATGTTAATTAATTATCTTTATCTCATTTGATGTTTGGTTATGGGATGTTCTGTTGTTTATTGTAGGCCAATCAGTCAAACTGGTATATAAGATGCAATCCGTACAACTTTAGTATAAAAATTAACACCTGGCTGCGGTAGTAGCATAAAGAAGTACAAAAGAGTACATCGAAACCTTTTTTTTTGTTGCAGATGATACATGGATTTTTCCTCTGTTGAAAAAAACCGAATTTAAGAATCACTACTTGAACTCTAAATTTCCTTTGGATGCTATGAGGAGTGGTTATCTTTTTAGTGTCGAGATGTAGTTAGAAGTAGAGTGGTGATGGGAAATGGCAATGAAGGTGGTTTACGCTATGGCTACTCTGCTGAAGGAGGGAGATGAATAAAATAGAGGAAAGCATGAATACTGAAATAACATAGCCCTCCGTGTATTACGGGCCTCATTTTTGAATCTCTGATCCAAAAACAGTCTTCAAAAAGTTGCGGGTTAAATTTTTATCTACCAATAAAAGGGGTTGCATATTTTAAACGTACTGATTTTGATATGTGCCTTACATTTGTGCTTTGATTTATTTGCCTATTGGCAATCATAGAATTCAGTGTCCAGATGTTATCTTTTCATGATTAAGGGCTAAACCTTCCTAAGATTTGGAGGGAAAGAAAAAATATCAGCATAGTCCTAGATTGATGCCTTAAACAGCTCAGAATCCCCTAATGCACCCTACTTAGGTTAGTAAAAAACAATGTGTTGCCTCTTACCAATAAACAGGAAGTTGGCTAAACCTTCCTTTCCAAAACTAACTCATTATTTTTTTGACGTTTTTGCTTCATATATTCTTTTCTTTTTGAGGGATATATAGAAACAGAGCGAACATTTTTCTAGAACTAAAATCTGTATGCTTGGTCCTAGATTTCAGAACTTGCACTTTTGGAAGAATCATTTGAAGCCAACATTCGTGATTATACCAAGTTAATTCATCTGTATGCCAAGCTTGACCGGCTTCAAGATGCAGAAAATGTACTCTTGATGATAAGTAAAAGAGGGCTTACTTGTGATCAGGTGATATTGACGACCATGATCCATATGTATAGCAAAGCTGGCCACTTTAAGTTGGCTGAAGAAACATTTGAGGAAATGAAGCTTCTTGGTCAGCCATTAGATAAAAGATCATACGGGTCAATGATCATGGCTTACATCAGGGCTGGAATGCCAGATAAAGGAGAAGATTTAATTAAGGAAATGGAACAGCAAGAAGTGTATGCAGGTGCGGAAGTTTTCAAGGCATTGCTGAGGACTTACTCCATGAAAGGTGATGCTAAAGGTGCACAGAGAGTTTTTGACGCGATCCAAGTTGGTGGCATTTATCCTGACATCAAGCTGTGTTGCCTGCTCATAAATGCCTATGTTGAGGCTAGACAAAGTCAAAAAGCTCGTGTTGTATTTGAAAATATGAGAAAGGCTGGTATACAACCTAATGATAAATGTGTAGCTCTTTTGTTGTCTGGTTATGAAAAGGAGAACATGGTTAACACAGCTATGGAGTTCTTAATACATTTAGAGAGAGAAGGTGTTGTGGTTGGTAAAGAAGCTTCTCAAGTATTGGTAGATTGGTTCCGTAAGCTAGGGGTAGTGGAGGAAGTGGCGAATGTCTTGAAAGAGTTTGCTGCCAATGAAGCTGCTTTCTGAAAACCTCACTCTGTGGCGGAGGTGTGTTGTTCTGAAGGTGGCCAACCTTTCATTGAGTTCTGTATAACTGAGAGGCAGGAATGATAAACTATCGAAAAAGTCTATAATCACATTCTGAAGACCCGGGTTGCAGAATGGTAATTCAATGTTGTTTGATCTAATCTGACTTATACCAGTTCATCTTTGGTTGCCGGGTTAGCTTTTCTAATAAATGTGAACGTGTTTCATGCAGTTGGTTGTTATGGGTAACAACGGATGCAAAACTCTGAACCTCTGAAGACAGACGGCATAGCAGCCCGAGATCAGTAACAACTAACTAACATGAGTGTTGGTACTGTTGCAAGAGCCAAACACAGATGCTTTTGGCTTGGAAGAATGAACACACATTTTCAGAACTTTAAACTTCCACGGTTCCACCTGTTCTATACGGAAAGGAAGGATTTTGCAGGTTTCAGGGGTTTATTTATTGTCATAGAATGGTACATGCATCTTCTGCAAAAAGTCTATTATTAAAAGGTGGACATAAAACTGTATGTATGATAAATTTGAAGTATTTATTTTACCAGAATGTTCAGTTTGACAGCAAATTGGTAATTTTTTTTCTTTATTCTTCAAAGTATTGGCCCTTGCTCCTCGCCTTGTACACTGGCACAATCACCATTACCAGACCTATTTGCCTAAAACACTTCACTTGAAT

mRNA sequence

ATTGATTTGATAACATATACTTCTTGCATTTTCAATTTTATTTGGGTAATTCAATTCCATACCAAAACGATGGCTTGTTCTCATTCTCACTTGCTCTTCTACCCATTCACCTCTCTCAAAGATAAACTTACACTACATTACACCAAATTTCCAGAAAACCCCACAAATTTCGCAGCGCAGAAACTCACACCCAGATTCAATTCATCATTTTCCACTACACAAATTACAGGAAATGCAGAAGTAATTCAGGAACCCAAAGAGCGACAGAAATTCAGATGGGTGGTAATAAACCCAGAAAAGGTTACAGAATCACAAAAACTTGCAATTTCTAGATTACCCAAGAAAATGGAGAAAAGATGTACTGCAGTAATGAAGCAGATTATCTGCTTTTCACCTGAAAAGGGTAATCTGTCTGATTTGCTGGGTGCTTGGGTGAAGATTATGAAGCCCAGAAGAGCTGATTGGCTTGCAATTCTTAAGGAATTATGCTTTATGGATCATCCGTTGTTTTTTGAGATTTCAGAACTTGCACTTTTGGAAGAATCATTTGAAGCCAACATTCGTGATTATACCAAGTTAATTCATCTGTATGCCAAGCTTGACCGGCTTCAAGATGCAGAAAATGTACTCTTGATGATAAGTAAAAGAGGGCTTACTTGTGATCAGGTGATATTGACGACCATGATCCATATGTATAGCAAAGCTGGCCACTTTAAGTTGGCTGAAGAAACATTTGAGGAAATGAAGCTTCTTGGTCAGCCATTAGATAAAAGATCATACGGGTCAATGATCATGGCTTACATCAGGGCTGGAATGCCAGATAAAGGAGAAGATTTAATTAAGGAAATGGAACAGCAAGAAGTGTATGCAGGTGCGGAAGTTTTCAAGGCATTGCTGAGGACTTACTCCATGAAAGGTGATGCTAAAGGTGCACAGAGAGTTTTTGACGCGATCCAAGTTGGTGGCATTTATCCTGACATCAAGCTGTGTTGCCTGCTCATAAATGCCTATGTTGAGGCTAGACAAAGTCAAAAAGCTCGTGTTGTATTTGAAAATATGAGAAAGGCTGGTATACAACCTAATGATAAATGTGTAGCTCTTTTGTTGTCTGGTTATGAAAAGGAGAACATGGTTAACACAGCTATGGAGTTCTTAATACATTTAGAGAGAGAAGGTGTTGTGGTTGGTAAAGAAGCTTCTCAAGTATTGGTAGATTGGTTCCGTAAGCTAGGGGTAGTGGAGGAAGTGGCGAATGTCTTGAAAGAGTTTGCTGCCAATGAAGCTGCTTTCTGAAAACCTCACTCTGTGGCGGAGGTGTGTTGTTCTGAAGGTGGCCAACCTTTCATTGAGTTCTGTATAACTGAGAGGCAGGAATGATAAACTATCGAAAAAGTCTATAATCACATTCTGAAGACCCGGGTTGCAGAATGGTAATTCAATGTTGTTTGATCTAATCTGACTTATACCAGTTCATCTTTGGTTGCCGGGTTAGCTTTTCTAATAAATGTGAACGTGTTTCATGCAGTTGGTTGTTATGGGTAACAACGGATGCAAAACTCTGAACCTCTGAAGACAGACGGCATAGCAGCCCGAGATCAGTAACAACTAACTAACATGAGTGTTGGTACTGTTGCAAGAGCCAAACACAGATGCTTTTGGCTTGGAAGAATGAACACACATTTTCAGAACTTTAAACTTCCACGGTTCCACCTGTTCTATACGGAAAGGAAGGATTTTGCAGGTTTCAGGGGTTTATTTATTGTCATAGAATGGTACATGCATCTTCTGCAAAAAGTCTATTATTAAAAGGTGGACATAAAACTGTATGTATGATAAATTTGAAGTATTTATTTTACCAGAATGTTCAGTTTGACAGCAAATTGGTAATTTTTTTTCTTTATTCTTCAAAGTATTGGCCCTTGCTCCTCGCCTTGTACACTGGCACAATCACCATTACCAGACCTATTTGCCTAAAACACTTCACTTGAAT

Coding sequence (CDS)

ATGGCTTGTTCTCATTCTCACTTGCTCTTCTACCCATTCACCTCTCTCAAAGATAAACTTACACTACATTACACCAAATTTCCAGAAAACCCCACAAATTTCGCAGCGCAGAAACTCACACCCAGATTCAATTCATCATTTTCCACTACACAAATTACAGGAAATGCAGAAGTAATTCAGGAACCCAAAGAGCGACAGAAATTCAGATGGGTGGTAATAAACCCAGAAAAGGTTACAGAATCACAAAAACTTGCAATTTCTAGATTACCCAAGAAAATGGAGAAAAGATGTACTGCAGTAATGAAGCAGATTATCTGCTTTTCACCTGAAAAGGGTAATCTGTCTGATTTGCTGGGTGCTTGGGTGAAGATTATGAAGCCCAGAAGAGCTGATTGGCTTGCAATTCTTAAGGAATTATGCTTTATGGATCATCCGTTGTTTTTTGAGATTTCAGAACTTGCACTTTTGGAAGAATCATTTGAAGCCAACATTCGTGATTATACCAAGTTAATTCATCTGTATGCCAAGCTTGACCGGCTTCAAGATGCAGAAAATGTACTCTTGATGATAAGTAAAAGAGGGCTTACTTGTGATCAGGTGATATTGACGACCATGATCCATATGTATAGCAAAGCTGGCCACTTTAAGTTGGCTGAAGAAACATTTGAGGAAATGAAGCTTCTTGGTCAGCCATTAGATAAAAGATCATACGGGTCAATGATCATGGCTTACATCAGGGCTGGAATGCCAGATAAAGGAGAAGATTTAATTAAGGAAATGGAACAGCAAGAAGTGTATGCAGGTGCGGAAGTTTTCAAGGCATTGCTGAGGACTTACTCCATGAAAGGTGATGCTAAAGGTGCACAGAGAGTTTTTGACGCGATCCAAGTTGGTGGCATTTATCCTGACATCAAGCTGTGTTGCCTGCTCATAAATGCCTATGTTGAGGCTAGACAAAGTCAAAAAGCTCGTGTTGTATTTGAAAATATGAGAAAGGCTGGTATACAACCTAATGATAAATGTGTAGCTCTTTTGTTGTCTGGTTATGAAAAGGAGAACATGGTTAACACAGCTATGGAGTTCTTAATACATTTAGAGAGAGAAGGTGTTGTGGTTGGTAAAGAAGCTTCTCAAGTATTGGTAGATTGGTTCCGTAAGCTAGGGGTAGTGGAGGAAGTGGCGAATGTCTTGAAAGAGTTTGCTGCCAATGAAGCTGCTTTCTGA

Protein sequence

MACSHSHLLFYPFTSLKDKLTLHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQEPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGAWVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRLQDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSMIMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGIYPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAMEFLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAAF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06916.1Spo06916.1mRNA


Homology
[Close]
BLAST of Spo06916.1 vs. NCBI nr
Match: gi|902205192|gb|KNA15113.1| (hypothetical protein SOVF_101150 [Spinacia oleracea])

HSP 1 Score: 803.9 bits (2075), Expect = 1.300e-229
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1 

		  

Query: 1   MACSHSHLLFYPFTSLKDKLTLHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQ 60
           MACSHSHLLFYPFTSLKDKLTLHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQ
Sbjct: 1   MACSHSHLLFYPFTSLKDKLTLHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQ 60

Query: 61  EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA 120
           EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA
Sbjct: 61  EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA 120

Query: 121 WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL 180
           WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL
Sbjct: 121 WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL 180

Query: 181 QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM 240
           QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM
Sbjct: 181 QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM 240

Query: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI 300
           IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI
Sbjct: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI 300

Query: 301 YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME 360
           YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME
Sbjct: 301 YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME 360

Query: 361 FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAAF 408
           FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAAF
Sbjct: 361 FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAAF 407
[Close]
BLAST of Spo06916.1 vs. NCBI nr
Match: gi|731317635|ref|XP_010669294.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 642.1 bits (1655), Expect = 6.500e-181
Identity = 323/407 (79.36%), Postives = 358/407 (87.96%), Query Frame = 1 

		  

Query: 1   MACSHSHLLFYPFTSLKDKLTLHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQ 60
           MACS SHLL Y FTSLKDKL +H ++FPE PTNF   K TP +N + ST  IT NAE  Q
Sbjct: 1   MACSSSHLLSYSFTSLKDKLLVHPSRFPETPTNFTTLKNTPTWNLAVSTAHITENAET-Q 60

Query: 61  EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA 120
           E KE +KFRW+ INP  +TESQKLAISRLPK ME+RC A+M+QIICFSPEKG+L +LL A
Sbjct: 61  ELKEPRKFRWLEINPGNITESQKLAISRLPKMMERRCKALMRQIICFSPEKGSLCELLAA 120

Query: 121 WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL 180
           WVKIMKP+RADWLA+LKEL F+DHP F EI ELALL+ESFEAN+RDYTK+IHLYAK +RL
Sbjct: 121 WVKIMKPKRADWLAVLKELSFVDHPSFIEIFELALLDESFEANVRDYTKMIHLYAKHERL 180

Query: 181 QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM 240
           QDAEN+LL +SKRGL CDQV LTTM+HMYSKAGHFKLAEETFEEMKLL Q LDKRSYGSM
Sbjct: 181 QDAENMLLAMSKRGLACDQVTLTTMVHMYSKAGHFKLAEETFEEMKLLSQQLDKRSYGSM 240

Query: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI 300
           IMAYIRAGMPDKGEDLIKEMEQQEVYAG EV+KALLRTYSMKGDA+GAQR+FDAIQV GI
Sbjct: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGTEVYKALLRTYSMKGDAEGAQRIFDAIQVAGI 300

Query: 301 YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME 360
           YPDIKLC LLINAYVEA QSQ ARV FENMR+A I+PNDKCVALLL  YEKEN VNTAME
Sbjct: 301 YPDIKLCGLLINAYVEAGQSQNARVAFENMRRADIEPNDKCVALLLKAYEKENKVNTAME 360

Query: 361 FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAAF 408
           FL+HLE+EG+V GKEASQVLVDWFRKLGVVEEVA+VL+E+ AN+AAF
Sbjct: 361 FLVHLEKEGIVTGKEASQVLVDWFRKLGVVEEVADVLREYTANDAAF 406
[Close]
BLAST of Spo06916.1 vs. NCBI nr
Match: gi|590722924|ref|XP_007052035.1| (Tetratricopeptide repeat (TPR)-like superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 483.4 bits (1243), Expect = 3.900e-133
Identity = 251/409 (61.37%), Postives = 317/409 (77.51%), Query Frame = 1 

		  

Query: 3   CSHSHLLFYPFTSLKDKLTLHYTKFPE-NPTNFAAQKLTPRFNSSFSTTQ---ITGNAEV 62
           CS+S    YPF + K K  +H   +   NP  F  QK   +F+S     Q    + N E 
Sbjct: 11  CSYST---YPFIN-KTKKQIHPQSWGNRNPLLF--QKKGAKFSSCKVNNQPEIASSNVEE 70

Query: 63  IQEPK---ERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLS 122
             +P+   E+++++WV I P+ + E QK AI+ LP KM KRC A+MKQIICF PEKG+L+
Sbjct: 71  KGKPETNEEKRRYKWVEIGPD-IAEEQKQAITELPFKMTKRCKALMKQIICFCPEKGSLA 130

Query: 123 DLLGAWVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYA 182
           DLL AWVKIMKPRRADWL +LKEL  M+HPL+FE++ELALLEESFEANIRD+TK+IH Y 
Sbjct: 131 DLLAAWVKIMKPRRADWLVVLKELKIMEHPLYFEVAELALLEESFEANIRDFTKIIHGYG 190

Query: 183 KLDRLQDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKR 242
           K  RLQ+AEN+L+ + +RG  CDQV LTTM+HMYSKAG+ KLAEETFEE+KLLGQ LDKR
Sbjct: 191 KQKRLQEAENILVAMKRRGFICDQVTLTTMVHMYSKAGNLKLAEETFEEIKLLGQQLDKR 250

Query: 243 SYGSMIMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAI 302
           SYGSMIMAYIR+G P++GE L++EM+ QE+YAG+EV+KALLR YSM GDA GAQRVFD I
Sbjct: 251 SYGSMIMAYIRSGTPEQGEALLREMDSQEIYAGSEVYKALLRAYSMLGDANGAQRVFDTI 310

Query: 303 QVGGIYPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMV 362
           Q+ GI PD ++C LLINAY  A QS KA + FENMR+AG++P+DKCVAL+++ YEK+N +
Sbjct: 311 QLAGISPDARMCGLLINAYQLAGQSDKAHIAFENMRRAGLEPSDKCVALVVAAYEKQNKL 370

Query: 363 NTAMEFLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANE 405
           N A++FL+ LER+G+VVGKEAS +L  WF+KLGVVE+V  VL+EFAA E
Sbjct: 371 NKALDFLMELERDGIVVGKEASGILAQWFKKLGVVEQVELVLREFAAKE 412
[Close]
BLAST of Spo06916.1 vs. NCBI nr
Match: gi|823150838|ref|XP_012475249.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Gossypium raimondii])

HSP 1 Score: 478.4 bits (1230), Expect = 1.200e-131
Identity = 230/342 (67.25%), Postives = 289/342 (84.50%), Query Frame = 1 

		  

Query: 61  EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA 120
           + +E+++F+WV I P  +TE Q+ AI +LP KM KRC A+MKQIICF+PEKG+L DLLGA
Sbjct: 59  DAEEKRRFKWVEIGPG-ITEEQRQAIDKLPFKMTKRCKALMKQIICFNPEKGSLEDLLGA 118

Query: 121 WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL 180
           WV +MKPRRADWL +LKEL  M+HPL+F+++E+ALLEE+FEANIRDYTK+IH Y K +RL
Sbjct: 119 WVNVMKPRRADWLVVLKELKIMEHPLYFQVAEIALLEETFEANIRDYTKIIHGYGKQNRL 178

Query: 181 QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM 240
           ++AEN+L  + +RG  CDQV LTTM+HMYSKAG+ KLAE+TFEE+KLLGQ LDKRSYG+M
Sbjct: 179 REAENILDAMKRRGFICDQVTLTTMVHMYSKAGNLKLAEDTFEEIKLLGQQLDKRSYGAM 238

Query: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI 300
           IMAYIRAGMP++GE L+KEM+  E+YAG+EV+KALLR YS  GD  GAQRVF AIQ+ GI
Sbjct: 239 IMAYIRAGMPEQGEGLLKEMDNLEIYAGSEVYKALLRAYSTNGDTDGAQRVFGAIQLAGI 298

Query: 301 YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME 360
            PD KLC LLINAY  A QS++ARV FENMR+AG++P+DKCVAL+L+ YEK+N +N A+E
Sbjct: 299 SPDAKLCGLLINAYQVAGQSEEARVAFENMRRAGLEPSDKCVALVLAAYEKQNKLNKALE 358

Query: 361 FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAA 403
           FL+ LER+G+VVGKEAS +L  WF+KLGVVE+V  VL+EFAA
Sbjct: 359 FLMDLERDGIVVGKEASSILAQWFKKLGVVEQVEQVLREFAA 399
[Close]
BLAST of Spo06916.1 vs. NCBI nr
Match: gi|703085829|ref|XP_010092845.1| (hypothetical protein L484_022440 [Morus notabilis])

HSP 1 Score: 474.6 bits (1220), Expect = 1.800e-130
Identity = 244/400 (61.00%), Postives = 312/400 (78.00%), Query Frame = 1 

		  

Query: 10  FYPFTSLKDKLT-LHYTKFP--ENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQEPKERQ 69
           F+P  +L +++T  H+   P    PTNF ++ L   F      T +    E  +    + 
Sbjct: 5   FHPPNTLTNEITKTHFFPKPFYPTPTNFPSRNL--HFRRPLVATSVE-ETEKAENGGGKP 64

Query: 70  KFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGAWVKIMK 129
           KF+WV + P  +TESQK AIS+L  KM KRC A+MKQ+ICFS  K +L++LL AWV+IMK
Sbjct: 65  KFKWVEVGPG-ITESQKEAISQLSPKMTKRCRALMKQLICFSAHKASLNELLAAWVRIMK 124

Query: 130 PRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRLQDAENV 189
           P+RADWLAI+K+L  MDHPL+F+++E+ALLEESFEANIRDYTK+IH Y K +RL+DAE  
Sbjct: 125 PQRADWLAIIKQLKIMDHPLYFQVAEVALLEESFEANIRDYTKIIHCYGKQNRLEDAEKT 184

Query: 190 LLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSMIMAYIR 249
           LL +  RG   DQV LTT IHMYSKAG+ KLAEETFEE+KLLGQPLDKRSYGSMIMAYIR
Sbjct: 185 LLAMKSRGFIRDQVTLTTFIHMYSKAGNLKLAEETFEELKLLGQPLDKRSYGSMIMAYIR 244

Query: 250 AGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGIYPDIKL 309
           AGMPD+GE++++EM+ +E+YAG+EV+KALLR YSM GDA+GAQRVFDAIQ+ GI PD +L
Sbjct: 245 AGMPDQGENILREMDVEEIYAGSEVYKALLRAYSMTGDAEGAQRVFDAIQLAGILPDPRL 304

Query: 310 CCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAMEFLIHLE 369
           C LLINAYVE+ QS+KA V F NMR+AG++P+DKCVAL+L  YEKEN +  A++FL+ LE
Sbjct: 305 CGLLINAYVESGQSEKACVAFGNMRRAGLEPSDKCVALVLCAYEKENKLQRALDFLMELE 364

Query: 370 REGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAA 407
           R G++VG+EAS+ LV WFRKLGVV+EV  VL+E+A+  A+
Sbjct: 365 RHGIMVGEEASETLVGWFRKLGVVKEVDLVLREYASKGAS 400
[Close]
BLAST of Spo06916.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6J0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101150 PE=4 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 9.000e-230
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1 

		  

Query: 1   MACSHSHLLFYPFTSLKDKLTLHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQ 60
           MACSHSHLLFYPFTSLKDKLTLHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQ
Sbjct: 1   MACSHSHLLFYPFTSLKDKLTLHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQ 60

Query: 61  EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA 120
           EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA
Sbjct: 61  EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA 120

Query: 121 WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL 180
           WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL
Sbjct: 121 WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL 180

Query: 181 QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM 240
           QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM
Sbjct: 181 QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM 240

Query: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI 300
           IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI
Sbjct: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI 300

Query: 301 YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME 360
           YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME
Sbjct: 301 YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME 360

Query: 361 FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAAF 408
           FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAAF
Sbjct: 361 FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAAF 407
[Close]
BLAST of Spo06916.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CW49_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g033640 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 4.500e-181
Identity = 323/407 (79.36%), Postives = 358/407 (87.96%), Query Frame = 1 

		  

Query: 1   MACSHSHLLFYPFTSLKDKLTLHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQ 60
           MACS SHLL Y FTSLKDKL +H ++FPE PTNF   K TP +N + ST  IT NAE  Q
Sbjct: 1   MACSSSHLLSYSFTSLKDKLLVHPSRFPETPTNFTTLKNTPTWNLAVSTAHITENAET-Q 60

Query: 61  EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA 120
           E KE +KFRW+ INP  +TESQKLAISRLPK ME+RC A+M+QIICFSPEKG+L +LL A
Sbjct: 61  ELKEPRKFRWLEINPGNITESQKLAISRLPKMMERRCKALMRQIICFSPEKGSLCELLAA 120

Query: 121 WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL 180
           WVKIMKP+RADWLA+LKEL F+DHP F EI ELALL+ESFEAN+RDYTK+IHLYAK +RL
Sbjct: 121 WVKIMKPKRADWLAVLKELSFVDHPSFIEIFELALLDESFEANVRDYTKMIHLYAKHERL 180

Query: 181 QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM 240
           QDAEN+LL +SKRGL CDQV LTTM+HMYSKAGHFKLAEETFEEMKLL Q LDKRSYGSM
Sbjct: 181 QDAENMLLAMSKRGLACDQVTLTTMVHMYSKAGHFKLAEETFEEMKLLSQQLDKRSYGSM 240

Query: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI 300
           IMAYIRAGMPDKGEDLIKEMEQQEVYAG EV+KALLRTYSMKGDA+GAQR+FDAIQV GI
Sbjct: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGTEVYKALLRTYSMKGDAEGAQRIFDAIQVAGI 300

Query: 301 YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME 360
           YPDIKLC LLINAYVEA QSQ ARV FENMR+A I+PNDKCVALLL  YEKEN VNTAME
Sbjct: 301 YPDIKLCGLLINAYVEAGQSQNARVAFENMRRADIEPNDKCVALLLKAYEKENKVNTAME 360

Query: 361 FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAAF 408
           FL+HLE+EG+V GKEASQVLVDWFRKLGVVEEVA+VL+E+ AN+AAF
Sbjct: 361 FLVHLEKEGIVTGKEASQVLVDWFRKLGVVEEVADVLREYTANDAAF 406
[Close]
BLAST of Spo06916.1 vs. UniProtKB/TrEMBL
Match: A0A061DV02_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma cacao GN=TCM_005495 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 2.700e-133
Identity = 251/409 (61.37%), Postives = 317/409 (77.51%), Query Frame = 1 

		  

Query: 3   CSHSHLLFYPFTSLKDKLTLHYTKFPE-NPTNFAAQKLTPRFNSSFSTTQ---ITGNAEV 62
           CS+S    YPF + K K  +H   +   NP  F  QK   +F+S     Q    + N E 
Sbjct: 11  CSYST---YPFIN-KTKKQIHPQSWGNRNPLLF--QKKGAKFSSCKVNNQPEIASSNVEE 70

Query: 63  IQEPK---ERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLS 122
             +P+   E+++++WV I P+ + E QK AI+ LP KM KRC A+MKQIICF PEKG+L+
Sbjct: 71  KGKPETNEEKRRYKWVEIGPD-IAEEQKQAITELPFKMTKRCKALMKQIICFCPEKGSLA 130

Query: 123 DLLGAWVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYA 182
           DLL AWVKIMKPRRADWL +LKEL  M+HPL+FE++ELALLEESFEANIRD+TK+IH Y 
Sbjct: 131 DLLAAWVKIMKPRRADWLVVLKELKIMEHPLYFEVAELALLEESFEANIRDFTKIIHGYG 190

Query: 183 KLDRLQDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKR 242
           K  RLQ+AEN+L+ + +RG  CDQV LTTM+HMYSKAG+ KLAEETFEE+KLLGQ LDKR
Sbjct: 191 KQKRLQEAENILVAMKRRGFICDQVTLTTMVHMYSKAGNLKLAEETFEEIKLLGQQLDKR 250

Query: 243 SYGSMIMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAI 302
           SYGSMIMAYIR+G P++GE L++EM+ QE+YAG+EV+KALLR YSM GDA GAQRVFD I
Sbjct: 251 SYGSMIMAYIRSGTPEQGEALLREMDSQEIYAGSEVYKALLRAYSMLGDANGAQRVFDTI 310

Query: 303 QVGGIYPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMV 362
           Q+ GI PD ++C LLINAY  A QS KA + FENMR+AG++P+DKCVAL+++ YEK+N +
Sbjct: 311 QLAGISPDARMCGLLINAYQLAGQSDKAHIAFENMRRAGLEPSDKCVALVVAAYEKQNKL 370

Query: 363 NTAMEFLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANE 405
           N A++FL+ LER+G+VVGKEAS +L  WF+KLGVVE+V  VL+EFAA E
Sbjct: 371 NKALDFLMELERDGIVVGKEASGILAQWFKKLGVVEQVELVLREFAAKE 412
[Close]
BLAST of Spo06916.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S0I3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G161000 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 8.700e-132
Identity = 230/342 (67.25%), Postives = 289/342 (84.50%), Query Frame = 1 

		  

Query: 61  EPKERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGA 120
           + +E+++F+WV I P  +TE Q+ AI +LP KM KRC A+MKQIICF+PEKG+L DLLGA
Sbjct: 59  DAEEKRRFKWVEIGPG-ITEEQRQAIDKLPFKMTKRCKALMKQIICFNPEKGSLEDLLGA 118

Query: 121 WVKIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRL 180
           WV +MKPRRADWL +LKEL  M+HPL+F+++E+ALLEE+FEANIRDYTK+IH Y K +RL
Sbjct: 119 WVNVMKPRRADWLVVLKELKIMEHPLYFQVAEIALLEETFEANIRDYTKIIHGYGKQNRL 178

Query: 181 QDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSM 240
           ++AEN+L  + +RG  CDQV LTTM+HMYSKAG+ KLAE+TFEE+KLLGQ LDKRSYG+M
Sbjct: 179 REAENILDAMKRRGFICDQVTLTTMVHMYSKAGNLKLAEDTFEEIKLLGQQLDKRSYGAM 238

Query: 241 IMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGI 300
           IMAYIRAGMP++GE L+KEM+  E+YAG+EV+KALLR YS  GD  GAQRVF AIQ+ GI
Sbjct: 239 IMAYIRAGMPEQGEGLLKEMDNLEIYAGSEVYKALLRAYSTNGDTDGAQRVFGAIQLAGI 298

Query: 301 YPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAME 360
            PD KLC LLINAY  A QS++ARV FENMR+AG++P+DKCVAL+L+ YEK+N +N A+E
Sbjct: 299 SPDAKLCGLLINAYQVAGQSEEARVAFENMRRAGLEPSDKCVALVLAAYEKQNKLNKALE 358

Query: 361 FLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAA 403
           FL+ LER+G+VVGKEAS +L  WF+KLGVVE+V  VL+EFAA
Sbjct: 359 FLMDLERDGIVVGKEASSILAQWFKKLGVVEQVEQVLREFAA 399
[Close]
BLAST of Spo06916.1 vs. UniProtKB/TrEMBL
Match: W9QSE5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022440 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.200e-130
Identity = 244/400 (61.00%), Postives = 312/400 (78.00%), Query Frame = 1 

		  

Query: 10  FYPFTSLKDKLT-LHYTKFP--ENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQEPKERQ 69
           F+P  +L +++T  H+   P    PTNF ++ L   F      T +    E  +    + 
Sbjct: 5   FHPPNTLTNEITKTHFFPKPFYPTPTNFPSRNL--HFRRPLVATSVE-ETEKAENGGGKP 64

Query: 70  KFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGAWVKIMK 129
           KF+WV + P  +TESQK AIS+L  KM KRC A+MKQ+ICFS  K +L++LL AWV+IMK
Sbjct: 65  KFKWVEVGPG-ITESQKEAISQLSPKMTKRCRALMKQLICFSAHKASLNELLAAWVRIMK 124

Query: 130 PRRADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRLQDAENV 189
           P+RADWLAI+K+L  MDHPL+F+++E+ALLEESFEANIRDYTK+IH Y K +RL+DAE  
Sbjct: 125 PQRADWLAIIKQLKIMDHPLYFQVAEVALLEESFEANIRDYTKIIHCYGKQNRLEDAEKT 184

Query: 190 LLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSMIMAYIR 249
           LL +  RG   DQV LTT IHMYSKAG+ KLAEETFEE+KLLGQPLDKRSYGSMIMAYIR
Sbjct: 185 LLAMKSRGFIRDQVTLTTFIHMYSKAGNLKLAEETFEELKLLGQPLDKRSYGSMIMAYIR 244

Query: 250 AGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGIYPDIKL 309
           AGMPD+GE++++EM+ +E+YAG+EV+KALLR YSM GDA+GAQRVFDAIQ+ GI PD +L
Sbjct: 245 AGMPDQGENILREMDVEEIYAGSEVYKALLRAYSMTGDAEGAQRVFDAIQLAGILPDPRL 304

Query: 310 CCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAMEFLIHLE 369
           C LLINAYVE+ QS+KA V F NMR+AG++P+DKCVAL+L  YEKEN +  A++FL+ LE
Sbjct: 305 CGLLINAYVESGQSEKACVAFGNMRRAGLEPSDKCVALVLCAYEKENKLQRALDFLMELE 364

Query: 370 REGVVVGKEASQVLVDWFRKLGVVEEVANVLKEFAANEAA 407
           R G++VG+EAS+ LV WFRKLGVV+EV  VL+E+A+  A+
Sbjct: 365 RHGIMVGEEASETLVGWFRKLGVVKEVDLVLREYASKGAS 400
[Close]
BLAST of Spo06916.1 vs. ExPASy Swiss-Prot
Match: PPR1_ARATH (Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana GN=At1g01970 PE=2 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 7.800e-118
Identity = 213/384 (55.47%), Postives = 284/384 (73.96%), Query Frame = 1 

		  

Query: 22  LHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQEPKERQKFRWVVINPEKVTES 81
           L++  F  NP       L    +   + +   G     ++ ++ + F W  +    +TE 
Sbjct: 25  LYHRMFRRNPL-LVESHLNRLCSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLN-LTEE 84

Query: 82  QKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGAWVKIMKPRRADWLAILKELCF 141
           Q  AI+R+P KM KRC A+M+QIICFSPEKG+  DLLGAW++ M P RADWL+ILKEL  
Sbjct: 85  QDEAITRIPIKMSKRCQALMRQIICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKN 144

Query: 142 MDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRLQDAENVLLMISKRGLTCDQVI 201
           +D P + +++E +LL++SFEAN RDYTK+IH Y KL++++DAE  LL +  RG   DQV 
Sbjct: 145 LDSPFYIKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVT 204

Query: 202 LTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSMIMAYIRAGMPDKGEDLIKEME 261
           LT M+ +YSKAG  KLAEETF E+KLLG+PLD RSYGSMIMAYIRAG+P+KGE L++EM+
Sbjct: 205 LTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMD 264

Query: 262 QQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGIYPDIKLCCLLINAYVEARQSQ 321
            QE+ AG EV+KALLR YSM GDA+GA+RVFDA+Q+ GI PD+KLC LLINAY  + QSQ
Sbjct: 265 SQEICAGREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQ 324

Query: 322 KARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAMEFLIHLEREGVVVGKEASQVLV 381
            AR+ FENMRKAGI+  DKCVAL+L+ YEKE  +N A+ FL+ LE++ +++GKEAS VL 
Sbjct: 325 NARLAFENMRKAGIKATDKCVALVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLA 384

Query: 382 DWFRKLGVVEEVANVLKEFAANEA 406
            WF+KLGVVEEV  +L+EF+++++
Sbjct: 385 QWFKKLGVVEEVELLLREFSSSQS 406
[Close]
BLAST of Spo06916.1 vs. ExPASy Swiss-Prot
Match: PPR51_ARATH (Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana GN=At1g19525 PE=2 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 1.900e-39
Identity = 84/209 (40.19%), Postives = 129/209 (61.72%), Query Frame = 1 

		  

Query: 190 ISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSMIMAYIRAGM 249
           +S+ G+  D +  T ++HMYSK+G+F+ A E FE +K  G   D++ Y +MI+ Y+ AG 
Sbjct: 1   MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60

Query: 250 PDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGIYP-DIKLCC 309
           P  GE L+KEM+ +E+ A  EV+ ALLR Y+  GDA GA  +  ++Q     P   +   
Sbjct: 61  PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120

Query: 310 LLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAMEFLIHLERE 369
           L + AY +A Q  KA+  F+ MRK G +P+DKC+A L+  Y+ EN ++ A+  L+ LE++
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180

Query: 370 GVVVGKEASQVLVDWFRKLGVVEEVANVL 398
           G+ +G     VLVDW   LG++EE   +L
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLL 209
[Close]
BLAST of Spo06916.1 vs. ExPASy Swiss-Prot
Match: PP365_ARATH (Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.900e-19
Identity = 79/345 (22.90%), Postives = 152/345 (44.06%), Query Frame = 1 

		  

Query: 63  KERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGAWV 122
           K  Q+ RWV    E    S K +  +  +   K    ++           N   ++ A+ 
Sbjct: 249 KAEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRIL------DTNGDNWQAVISAFE 308

Query: 123 KIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEA--------NIRDYTKLIHLY 182
           KI KP R ++  ++K         +    ++    E+FE           R YT LIH Y
Sbjct: 309 KISKPSRTEFGLMVK--------FYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY 368

Query: 183 AKLDRLQDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDK 242
           A    + +A + +  + + G+    V  + ++  +SKAGH + A+  F+E K + + L+ 
Sbjct: 369 AVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA 428

Query: 243 RSYGSMIMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDA 302
             YG +I A+ +    ++ E L++EME++ + A   ++  ++  Y+M  D K    VF  
Sbjct: 429 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 488

Query: 303 IQVGGIYPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENM 362
           ++  G  P +     LIN Y +  +  KA  V   M++ G++ N K  +++++G+ K   
Sbjct: 489 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 548

Query: 363 VNTAMEFLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKE 400
              A      + +EG+         ++  F  +G ++     +KE
Sbjct: 549 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
[Close]
BLAST of Spo06916.1 vs. ExPASy Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.500e-15
Identity = 52/235 (22.13%), Postives = 111/235 (47.23%), Query Frame = 1 

		  

Query: 161 EANIRDYTKLIHLYAKLDRLQDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEE 220
           E ++  Y  L+    K  ++  A  +L  +  + +  + V  +T+I  ++KAG F  A  
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430

Query: 221 TFEEMKLLGQPLDKRSYGSMIMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYS 280
            F EM+ LG  LD+ SY +++  Y + G  ++  D+++EM    +      + ALL  Y 
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490

Query: 281 MKGDAKGAQRVFDAIQVGGIYPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDK 340
            +G     ++VF  ++   + P++     LI+ Y +    ++A  +F   + AG++ +  
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550

Query: 341 CVALLLSGYEKENMVNTAMEFLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVAN 396
             + L+    K  +V +A+  +  + +EG+         ++D F +   ++  A+
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
[Close]
BLAST of Spo06916.1 vs. ExPASy Swiss-Prot
Match: PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 1.500e-15
Identity = 53/218 (24.31%), Postives = 106/218 (48.62%), Query Frame = 1 

		  

Query: 157 EESFEANIRDYTKLIHLYAKLDRLQDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFK 216
           E   EAN+  +  LI+ + ++      + VL ++ +  +  D +  +T+++ +S AG+ +
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 347

Query: 217 LAEETFEEMKLLGQPLDKRSYGSMIMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALL 276
            A + F+EM   G   D  +Y  +   Y+RA  P K E+L++ +   E      +F  ++
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV-ESRPNVVIFTTVI 407

Query: 277 RTYSMKGDAKGAQRVFDAIQVGGIYPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQ 336
             +   G    A RVF+ +   G+ P+IK    L+  Y+E +Q  KA  V + MR  G++
Sbjct: 408 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 467

Query: 337 PNDKCVALLLSGYEKENMVNTAMEFLIHLEREGVVVGK 375
           P +    LL   +    + + + + +  L+ + + + K
Sbjct: 468 PENSTFLLLAEAWRVAGLTDESNKAINALKCKDIEIAK 504
[Close]
BLAST of Spo06916.1 vs. TAIR (Arabidopsis)
Match: AT1G01970.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 425.2 bits (1092), Expect = 4.400e-119
Identity = 213/384 (55.47%), Postives = 284/384 (73.96%), Query Frame = 1 

		  

Query: 22  LHYTKFPENPTNFAAQKLTPRFNSSFSTTQITGNAEVIQEPKERQKFRWVVINPEKVTES 81
           L++  F  NP       L    +   + +   G     ++ ++ + F W  +    +TE 
Sbjct: 25  LYHRMFRRNPL-LVESHLNRLCSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLN-LTEE 84

Query: 82  QKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGAWVKIMKPRRADWLAILKELCF 141
           Q  AI+R+P KM KRC A+M+QIICFSPEKG+  DLLGAW++ M P RADWL+ILKEL  
Sbjct: 85  QDEAITRIPIKMSKRCQALMRQIICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKN 144

Query: 142 MDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRLQDAENVLLMISKRGLTCDQVI 201
           +D P + +++E +LL++SFEAN RDYTK+IH Y KL++++DAE  LL +  RG   DQV 
Sbjct: 145 LDSPFYIKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVT 204

Query: 202 LTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSMIMAYIRAGMPDKGEDLIKEME 261
           LT M+ +YSKAG  KLAEETF E+KLLG+PLD RSYGSMIMAYIRAG+P+KGE L++EM+
Sbjct: 205 LTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMD 264

Query: 262 QQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGIYPDIKLCCLLINAYVEARQSQ 321
            QE+ AG EV+KALLR YSM GDA+GA+RVFDA+Q+ GI PD+KLC LLINAY  + QSQ
Sbjct: 265 SQEICAGREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQ 324

Query: 322 KARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAMEFLIHLEREGVVVGKEASQVLV 381
            AR+ FENMRKAGI+  DKCVAL+L+ YEKE  +N A+ FL+ LE++ +++GKEAS VL 
Sbjct: 325 NARLAFENMRKAGIKATDKCVALVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLA 384

Query: 382 DWFRKLGVVEEVANVLKEFAANEA 406
            WF+KLGVVEEV  +L+EF+++++
Sbjct: 385 QWFKKLGVVEEVELLLREFSSSQS 406
[Close]
BLAST of Spo06916.1 vs. TAIR (Arabidopsis)
Match: AT1G19520.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 235.0 bits (598), Expect = 8.400e-62
Identity = 124/330 (37.58%), Postives = 204/330 (61.82%), Query Frame = 1 

		  

Query: 69  RWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGAWVKIMKPR 128
           +WV +  +K+ E+++ A  R PK +  +C  VM+++     E  + S LL  W ++++P 
Sbjct: 291 KWVEM-ADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQ-EGDDPSGLLAEWAELLEPN 350

Query: 129 RADWLAILKELCFMDHPLFFEISELALLEESFEANIRDYTKLIHLYAKLDRLQDAENVLL 188
           R DW+A++ +L   +   + +++E  L E+SF A+I DY+KLIH++AK + ++D E +L 
Sbjct: 351 RVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILK 410

Query: 189 MISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDKRSYGSMIMAYIRAG 248
            +S+ G+  D +  T ++HMYSK+G+F+ A E FE +K  G   D++ Y +MI+ Y+ AG
Sbjct: 411 KMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAG 470

Query: 249 MPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDAIQVGGIYP-DIKLC 308
            P  GE L+KEM+ +E+ A  EV+ ALLR Y+  GDA GA  +  ++Q     P   +  
Sbjct: 471 KPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAY 530

Query: 309 CLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENMVNTAMEFLIHLER 368
            L + AY +A Q  KA+  F+ MRK G +P+DKC+A L+  Y+ EN ++ A+  L+ LE+
Sbjct: 531 SLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEK 590

Query: 369 EGVVVGKEASQVLVDWFRKLGVVEEVANVL 398
           +G+ +G     VLVDW   LG++EE   +L
Sbjct: 591 DGIEIGVITYTVLVDWMANLGLIEEAEQLL 618
[Close]
BLAST of Spo06916.1 vs. TAIR (Arabidopsis)
Match: AT5G04810.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 97.8 bits (242), Expect = 1.600e-20
Identity = 79/345 (22.90%), Postives = 152/345 (44.06%), Query Frame = 1 

		  

Query: 63  KERQKFRWVVINPEKVTESQKLAISRLPKKMEKRCTAVMKQIICFSPEKGNLSDLLGAWV 122
           K  Q+ RWV    E    S K +  +  +   K    ++           N   ++ A+ 
Sbjct: 249 KAEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRIL------DTNGDNWQAVISAFE 308

Query: 123 KIMKPRRADWLAILKELCFMDHPLFFEISELALLEESFEA--------NIRDYTKLIHLY 182
           KI KP R ++  ++K         +    ++    E+FE           R YT LIH Y
Sbjct: 309 KISKPSRTEFGLMVK--------FYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY 368

Query: 183 AKLDRLQDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEETFEEMKLLGQPLDK 242
           A    + +A + +  + + G+    V  + ++  +SKAGH + A+  F+E K + + L+ 
Sbjct: 369 AVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA 428

Query: 243 RSYGSMIMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYSMKGDAKGAQRVFDA 302
             YG +I A+ +    ++ E L++EME++ + A   ++  ++  Y+M  D K    VF  
Sbjct: 429 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 488

Query: 303 IQVGGIYPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDKCVALLLSGYEKENM 362
           ++  G  P +     LIN Y +  +  KA  V   M++ G++ N K  +++++G+ K   
Sbjct: 489 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 548

Query: 363 VNTAMEFLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVANVLKE 400
              A      + +EG+         ++  F  +G ++     +KE
Sbjct: 549 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
[Close]
BLAST of Spo06916.1 vs. TAIR (Arabidopsis)
Match: AT2G31400.1 (genomes uncoupled 1)

HSP 1 Score: 85.5 bits (210), Expect = 8.300e-17
Identity = 52/235 (22.13%), Postives = 111/235 (47.23%), Query Frame = 1 

		  

Query: 161 EANIRDYTKLIHLYAKLDRLQDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEE 220
           E ++  Y  L+    K  ++  A  +L  +  + +  + V  +T+I  ++KAG F  A  
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430

Query: 221 TFEEMKLLGQPLDKRSYGSMIMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYS 280
            F EM+ LG  LD+ SY +++  Y + G  ++  D+++EM    +      + ALL  Y 
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490

Query: 281 MKGDAKGAQRVFDAIQVGGIYPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDK 340
            +G     ++VF  ++   + P++     LI+ Y +    ++A  +F   + AG++ +  
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550

Query: 341 CVALLLSGYEKENMVNTAMEFLIHLEREGVVVGKEASQVLVDWFRKLGVVEEVAN 396
             + L+    K  +V +A+  +  + +EG+         ++D F +   ++  A+
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
[Close]
BLAST of Spo06916.1 vs. TAIR (Arabidopsis)
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 84.0 bits (206), Expect = 2.400e-16
Identity = 56/248 (22.58%), Postives = 112/248 (45.16%), Query Frame = 1 

		  

Query: 161 EANIRDYTKLIHLYAKLDRLQDAENVLLMISKRGLTCDQVILTTMIHMYSKAGHFKLAEE 220
           + NI  Y  +++   K   +++A  ++      GL  D V  TT++  Y K+G    A+E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547

Query: 221 TFEEMKLLGQPLDKRSYGSMIMAYIRAGMPDKGEDLIKEMEQQEVYAGAEVFKALLRTYS 280
             +EM   G      ++  ++  +   GM + GE L+  M  + +   A  F +L++ Y 
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607

Query: 281 MKGDAKGAQRVFDAIQVGGIYPDIKLCCLLINAYVEARQSQKARVVFENMRKAGIQPNDK 340
           ++ + K A  ++  +   G+ PD K    L+  + +AR  ++A  +F+ M+  G   +  
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667

Query: 341 CVALLLSGYEKENMVNTAMEFLIHLEREGVVVGKEASQVLVD----WFRKLGVVEEVANV 400
             ++L+ G+ K      A E    + REG+   KE      D      R   +V+ +  +
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727

Query: 401 LKEFAANE 405
           ++ +  +E
Sbjct: 728 IENYLVDE 735
The following BLAST results are available for this feature:
BLAST of Spo06916.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902205192|gb|KNA15113.1|1.3e-229100.hypothetical protein SOVF_1011... [more]
gi|731317635|ref|XP_010669294.1|6.5e-18179.3PREDICTED: pentatricopeptide r... [more]
gi|590722924|ref|XP_007052035.1|3.9e-13361.3Tetratricopeptide repeat (TPR)... [more]
gi|823150838|ref|XP_012475249.1|1.2e-13167.2PREDICTED: pentatricopeptide r... [more]
gi|703085829|ref|XP_010092845.1|1.8e-13061.0hypothetical protein L484_0224... [more]
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BLAST of Spo06916.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R6J0_SPIOL9.0e-230100.Uncharacterized protein OS=Spi... [more]
A0A0J8CW49_BETVU4.5e-18179.3Uncharacterized protein OS=Bet... [more]
A0A061DV02_THECC2.7e-13361.3Tetratricopeptide repeat (TPR)... [more]
A0A0D2S0I3_GOSRA8.7e-13267.2Uncharacterized protein OS=Gos... [more]
W9QSE5_9ROSA1.2e-13061.0Uncharacterized protein OS=Mor... [more]
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BLAST of Spo06916.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PPR1_ARATH7.8e-11855.4Pentatricopeptide repeat-conta... [more]
PPR51_ARATH1.9e-3940.1Pentatricopeptide repeat-conta... [more]
PP365_ARATH2.9e-1922.9Pentatricopeptide repeat-conta... [more]
PP178_ARATH1.5e-1522.1Pentatricopeptide repeat-conta... [more]
PP397_ARATH1.5e-1524.3Pentatricopeptide repeat-conta... [more]
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BLAST of Spo06916.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G01970.14.4e-11955.4Tetratricopeptide repeat (TPR)... [more]
AT1G19520.18.4e-6237.5pentatricopeptide (PPR) repeat... [more]
AT5G04810.11.6e-2022.9pentatricopeptide (PPR) repeat... [more]
AT2G31400.18.3e-1722.1genomes uncoupled 1[more]
AT1G05670.12.4e-1622.5Pentatricopeptide repeat (PPR-... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 201..229
score: 1.1E-5coord: 167..195
score:
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 201..229
score: 2.8E-5coord: 307..338
score: 1.7E-6coord: 236..265
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 303..337
score: 10.358coord: 233..267
score: 10.161coord: 163..197
score: 8.177coord: 268..302
score: 7.925coord: 198..232
score: 10.03coord: 338..372
score:
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 176..333
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 33..399
score: 1.3E
NoneNo IPR availablePANTHERPTHR24015:SF457SUBFAMILY NOT NAMEDcoord: 33..399
score: 1.3E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009658 chloroplast organization
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0009507 chloroplast
cellular_component GO:0016020 membrane
cellular_component GO:0009536 plastid
cellular_component GO:0009295 nucleoid
cellular_component GO:0005768 endosome
cellular_component GO:0005840 ribosome
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
RNA-Seq Expression