Spo06980 (gene)

Overview
NameSpo06980
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransmembrane protein, putative
LocationSuper_scaffold_114 : 1381816 .. 1382625 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAATTATGAGTGGTTTAGGGATAGTGTTAAGTATAGTATTTGGTTGTTTATTATTAGCATTAATTGCAGAGCTTTACTATCTTCTATGGTGGAAGAAACAGAGAATAATCAGCAACACCAACAACAACAGAGTTGAACAAGATTACAGTAATCATGCGAAAGAGATGTTCTATCTATTCTGTTGGGATAAACCCACAACAATCAACACCACAGTTGTTGACAACGCAGTTGTCGGAAACCCAGAAACAGATATTGAAATGGGGTTAGAAACAAGAAAAGATCTGCTACTGAAGGCTCTAGGAGAAGAAGGTGTAGACTCAGACATCATGCGGCTAGCAGGGCATCCGAGATTCTTGTTCACAATCAAGGAAGAAACAAAGGAAGATTTGGAATCTGATGATGGGAAATCAAAGGCTAGTAGGAAAGGATCAAGAACAAGGAGTTTGAGTGATTTAATCATGGCCCTTGAAACACACTCACCTTACAACAATAACAACCTTAGTCCTAACATCTCTTCTCCTAATAAGGCATTGTTGTTCAACAACAGCAATAATTACAACAACCCGTTGTTTGAAACATCAGTTGAAGCTGAAATCAACAGATTGAGATCTTCACCACCACCAAAATTCAAGTTTCTGAGAGATGCTGAGGAGAAGTTGTATAGAAGGTTGGTTGAGGAAGCCCAGAAAAGTGGGGTTTTTCAGGAGGTTATTTTGGAGAATTCACTTCCTGAACAAGGGGAGAAAGAGAGGGGTATTGATTGCAATTCTCAGGTAACTCCGTTGGCTTCTTCTCCTCCAAAATAA

mRNA sequence

ATGACAATTATGAGTGGTTTAGGGATAGTGTTAAGTATAGTATTTGGTTGTTTATTATTAGCATTAATTGCAGAGCTTTACTATCTTCTATGGTGGAAGAAACAGAGAATAATCAGCAACACCAACAACAACAGAGTTGAACAAGATTACAGTAATCATGCGAAAGAGATGTTCTATCTATTCTGTTGGGATAAACCCACAACAATCAACACCACAGTTGTTGACAACGCAGTTGTCGGAAACCCAGAAACAGATATTGAAATGGGGTTAGAAACAAGAAAAGATCTGCTACTGAAGGCTCTAGGAGAAGAAGGTGTAGACTCAGACATCATGCGGCTAGCAGGGCATCCGAGATTCTTGTTCACAATCAAGGAAGAAACAAAGGAAGATTTGGAATCTGATGATGGGAAATCAAAGGCTAGTAGGAAAGGATCAAGAACAAGGAGTTTGAGTGATTTAATCATGGCCCTTGAAACACACTCACCTTACAACAATAACAACCTTAGTCCTAACATCTCTTCTCCTAATAAGGCATTGTTGTTCAACAACAGCAATAATTACAACAACCCGTTGTTTGAAACATCAGTTGAAGCTGAAATCAACAGATTGAGATCTTCACCACCACCAAAATTCAAGTTTCTGAGAGATGCTGAGGAGAAGTTGTATAGAAGGTTGGTTGAGGAAGCCCAGAAAAGTGGGGTTTTTCAGGAGGTTATTTTGGAGAATTCACTTCCTGAACAAGGGGAGAAAGAGAGGGGTATTGATTGCAATTCTCAGGTAACTCCGTTGGCTTCTTCTCCTCCAAAATAA

Coding sequence (CDS)

ATGACAATTATGAGTGGTTTAGGGATAGTGTTAAGTATAGTATTTGGTTGTTTATTATTAGCATTAATTGCAGAGCTTTACTATCTTCTATGGTGGAAGAAACAGAGAATAATCAGCAACACCAACAACAACAGAGTTGAACAAGATTACAGTAATCATGCGAAAGAGATGTTCTATCTATTCTGTTGGGATAAACCCACAACAATCAACACCACAGTTGTTGACAACGCAGTTGTCGGAAACCCAGAAACAGATATTGAAATGGGGTTAGAAACAAGAAAAGATCTGCTACTGAAGGCTCTAGGAGAAGAAGGTGTAGACTCAGACATCATGCGGCTAGCAGGGCATCCGAGATTCTTGTTCACAATCAAGGAAGAAACAAAGGAAGATTTGGAATCTGATGATGGGAAATCAAAGGCTAGTAGGAAAGGATCAAGAACAAGGAGTTTGAGTGATTTAATCATGGCCCTTGAAACACACTCACCTTACAACAATAACAACCTTAGTCCTAACATCTCTTCTCCTAATAAGGCATTGTTGTTCAACAACAGCAATAATTACAACAACCCGTTGTTTGAAACATCAGTTGAAGCTGAAATCAACAGATTGAGATCTTCACCACCACCAAAATTCAAGTTTCTGAGAGATGCTGAGGAGAAGTTGTATAGAAGGTTGGTTGAGGAAGCCCAGAAAAGTGGGGTTTTTCAGGAGGTTATTTTGGAGAATTCACTTCCTGAACAAGGGGAGAAAGAGAGGGGTATTGATTGCAATTCTCAGGTAACTCCGTTGGCTTCTTCTCCTCCAAAATAA

Protein sequence

MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYLFCWDKPTTINTTVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMRLAGHPRFLFTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPYNNNNLSPNISSPNKALLFNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVEEAQKSGVFQEVILENSLPEQGEKERGIDCNSQVTPLASSPPK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06980.1Spo06980.1mRNA


Homology
[Close]
BLAST of Spo06980.1 vs. NCBI nr
Match: gi|902228335|gb|KNA21061.1| (hypothetical protein SOVF_046470 [Spinacia oleracea])

HSP 1 Score: 524.6 bits (1350), Expect = 1.000e-145
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL
Sbjct: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60

Query: 61  FCWDKPTTINTTVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMRLAGHPRFL 120
           FCWDKPTTINTTVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMRLAGHPRFL
Sbjct: 61  FCWDKPTTINTTVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMRLAGHPRFL 120

Query: 121 FTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPYNNNNLSPNISSPNKALL 180
           FTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPYNNNNLSPNISSPNKALL
Sbjct: 121 FTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPYNNNNLSPNISSPNKALL 180

Query: 181 FNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVEEAQKSGVFQEVIL 240
           FNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVEEAQKSGVFQEVIL
Sbjct: 181 FNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVEEAQKSGVFQEVIL 240

Query: 241 ENSLPEQGEKERGIDCNSQVTPLASSPPK 270
           ENSLPEQGEKERGIDCNSQVTPLASSPPK
Sbjct: 241 ENSLPEQGEKERGIDCNSQVTPLASSPPK 269
[Close]
BLAST of Spo06980.1 vs. NCBI nr
Match: gi|731349031|ref|XP_010685790.1| (PREDICTED: uncharacterized protein LOC104900135 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 371.7 bits (953), Expect = 1.100e-99
Identity = 212/290 (73.10%), Postives = 232/290 (80.00%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           MTI+SGLGIVLS+VFGCLLLAL+AELYYLLWWKKQRII NT+N R++QDYS HAKEMFYL
Sbjct: 1   MTILSGLGIVLSLVFGCLLLALVAELYYLLWWKKQRIIGNTSN-RIDQDYSTHAKEMFYL 60

Query: 61  FCWDKPTTI------NTTVVDNAVVGNP---ETDIEMGLETRKDLLLKALGEEGVDSDIM 120
           FCWDKPTTI      N T   N VVGNP   + D+EMGLETRKDLLLKALGEEGVDSDIM
Sbjct: 61  FCWDKPTTIINNNNNNNTNSSNTVVGNPVQNDPDVEMGLETRKDLLLKALGEEGVDSDIM 120

Query: 121 RLAGHPRFLFTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPYNNNNLSPN 180
           RLAGHPRFLFTIKEETKEDLESDDGKSK   KGSRT SLSDLIMALETH+PY +   SP 
Sbjct: 121 RLAGHPRFLFTIKEETKEDLESDDGKSK---KGSRTTSLSDLIMALETHTPYISPMNSP- 180

Query: 181 ISSPNKALLFNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVEEAQK 240
            S+  K  L +N N  NNPLFE+SVEAEI+RLRSSPPPKFKFLRDAEEKLYRRLVEEAQK
Sbjct: 181 -SNLKKKSLDSNYNYNNNPLFESSVEAEISRLRSSPPPKFKFLRDAEEKLYRRLVEEAQK 240

Query: 241 SGVFQ-------------EVILENSLPEQGEKERG-IDCNSQVTPLASSP 268
           SG+FQ             E++++N   +  EKER  I CNSQV PLASSP
Sbjct: 241 SGIFQEGILDISHEVKKDEILMKNGGEKNKEKEREIIHCNSQVLPLASSP 284
[Close]
BLAST of Spo06980.1 vs. NCBI nr
Match: gi|870853392|gb|KMT05273.1| (hypothetical protein BVRB_7g174120 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 370.2 bits (949), Expect = 3.100e-99
Identity = 212/298 (71.14%), Postives = 233/298 (78.19%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           MTI+SGLGIVLS+VFGCLLLAL+AELYYLLWWKKQRII NT+N R++QDYS HAKEMFYL
Sbjct: 1   MTILSGLGIVLSLVFGCLLLALVAELYYLLWWKKQRIIGNTSN-RIDQDYSTHAKEMFYL 60

Query: 61  FCWDKPTTI------NTTVVDNAVVGNP---ETDIEMGLETRKDLLLKALGEEGVDSDIM 120
           FCWDKPTTI      N T   N VVGNP   + D+EMGLETRKDLLLKALGEEGVDSDIM
Sbjct: 61  FCWDKPTTIINNNNNNNTNSSNTVVGNPVQNDPDVEMGLETRKDLLLKALGEEGVDSDIM 120

Query: 121 RLAGHPRFLFTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPY-----NNN 180
           RLAGHPRFLFTIKEETKEDLESDDGKSK   KGSRT SLSDLIMALETH+PY     + +
Sbjct: 121 RLAGHPRFLFTIKEETKEDLESDDGKSK---KGSRTTSLSDLIMALETHTPYISPMNSPS 180

Query: 181 NLSPNISSPNKALLFNNSNNY---NNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYR 240
           NL       N    +NN+ NY   NNPLFE+SVEAEI+RLRSSPPPKFKFLRDAEEKLYR
Sbjct: 181 NLKKKSLDSNYNYDYNNNYNYNYNNNPLFESSVEAEISRLRSSPPPKFKFLRDAEEKLYR 240

Query: 241 RLVEEAQKSGVFQ-------------EVILENSLPEQGEKERG-IDCNSQVTPLASSP 268
           RLVEEAQKSG+FQ             E++++N   +  EKER  I CNSQV PLASSP
Sbjct: 241 RLVEEAQKSGIFQEGILDISHEVKKDEILMKNGGEKNKEKEREIIHCNSQVLPLASSP 294
[Close]
BLAST of Spo06980.1 vs. NCBI nr
Match: gi|225434988|ref|XP_002284037.1| (PREDICTED: uncharacterized protein LOC100248455 [Vitis vinifera])

HSP 1 Score: 256.9 bits (655), Expect = 3.900e-65
Identity = 151/249 (60.64%), Postives = 184/249 (73.90%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           M   SGLGI LS+VFGCLLLAL+AELYYLLWWKK+       N  +E DYSN AKE+FY+
Sbjct: 1   MASFSGLGICLSLVFGCLLLALVAELYYLLWWKKR-----ITNREIEYDYSNCAKELFYI 60

Query: 61  FCWDKPTTINT------TVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMR-- 120
           FCW +P  +++      +V D    G+ E D E+G  + KDLLLKA GEEGV+S++MR  
Sbjct: 61  FCWKRPAPLSSSSTQQLSVRDPVPNGHDEQDPELG--SGKDLLLKAFGEEGVESELMRLH 120

Query: 121 -LAGHPRFLFTIKEETKEDLESDDGKSKA--SRKGSRTRSLSDLIMALETHSPYNNNNLS 180
            LAG PRFLFTIKEETKEDLESDDGKSK   SR  SRTRSLSD+++A++T  P+    L+
Sbjct: 121 NLAGPPRFLFTIKEETKEDLESDDGKSKGDRSRTASRTRSLSDVLVAIDT--PF----LT 180

Query: 181 PNISSPNKALLFNNSNNYN----NPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRL 235
           P  S P K+  FN  + Y+    NPLFE+S E+E+NRLRSSPPPKFKFLRDAEEKLYRRL
Sbjct: 181 PLASPPLKSPTFNPFDCYSQHGFNPLFESSAESELNRLRSSPPPKFKFLRDAEEKLYRRL 236
[Close]
BLAST of Spo06980.1 vs. NCBI nr
Match: gi|147810042|emb|CAN69364.1| (hypothetical protein VITISV_006045 [Vitis vinifera])

HSP 1 Score: 254.6 bits (649), Expect = 1.900e-64
Identity = 150/249 (60.24%), Postives = 183/249 (73.49%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           M   SGLGI LS+VFGCLLLAL+AELYYLLWWKK+       N  +E DYSN AKE+FY+
Sbjct: 1   MASFSGLGICLSLVFGCLLLALVAELYYLLWWKKR-----ITNREIEYDYSNXAKELFYI 60

Query: 61  FCWDKPTTINT------TVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMR-- 120
           FCW +P  +++      +V D    G+ E D E+G  + KDLLLKA  EEGV+S++MR  
Sbjct: 61  FCWKRPAPLSSSSTQQLSVRDPVPNGHDEQDPELG--SGKDLLLKAFEEEGVESELMRLH 120

Query: 121 -LAGHPRFLFTIKEETKEDLESDDGKSKA--SRKGSRTRSLSDLIMALETHSPYNNNNLS 180
            LAG PRFLFTIKEETKEDLESDDGKSK   SR  SRTRSLSD+++A++T  P+    L+
Sbjct: 121 NLAGPPRFLFTIKEETKEDLESDDGKSKGDRSRTASRTRSLSDVLVAIDT--PF----LT 180

Query: 181 PNISSPNKALLFNNSNNYN----NPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRL 235
           P  S P K+  FN  + Y+    NPLFE+S E+E+NRLRSSPPPKFKFLRDAEEKLYRRL
Sbjct: 181 PLASPPLKSPTFNPLDCYSQHGFNPLFESSAESELNRLRSSPPPKFKFLRDAEEKLYRRL 236
[Close]
BLAST of Spo06980.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNF9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_046470 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 7.000e-146
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL
Sbjct: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60

Query: 61  FCWDKPTTINTTVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMRLAGHPRFL 120
           FCWDKPTTINTTVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMRLAGHPRFL
Sbjct: 61  FCWDKPTTINTTVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMRLAGHPRFL 120

Query: 121 FTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPYNNNNLSPNISSPNKALL 180
           FTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPYNNNNLSPNISSPNKALL
Sbjct: 121 FTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPYNNNNLSPNISSPNKALL 180

Query: 181 FNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVEEAQKSGVFQEVIL 240
           FNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVEEAQKSGVFQEVIL
Sbjct: 181 FNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVEEAQKSGVFQEVIL 240

Query: 241 ENSLPEQGEKERGIDCNSQVTPLASSPPK 270
           ENSLPEQGEKERGIDCNSQVTPLASSPPK
Sbjct: 241 ENSLPEQGEKERGIDCNSQVTPLASSPPK 269
[Close]
BLAST of Spo06980.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZ93_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174120 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.200e-99
Identity = 212/298 (71.14%), Postives = 233/298 (78.19%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           MTI+SGLGIVLS+VFGCLLLAL+AELYYLLWWKKQRII NT+N R++QDYS HAKEMFYL
Sbjct: 1   MTILSGLGIVLSLVFGCLLLALVAELYYLLWWKKQRIIGNTSN-RIDQDYSTHAKEMFYL 60

Query: 61  FCWDKPTTI------NTTVVDNAVVGNP---ETDIEMGLETRKDLLLKALGEEGVDSDIM 120
           FCWDKPTTI      N T   N VVGNP   + D+EMGLETRKDLLLKALGEEGVDSDIM
Sbjct: 61  FCWDKPTTIINNNNNNNTNSSNTVVGNPVQNDPDVEMGLETRKDLLLKALGEEGVDSDIM 120

Query: 121 RLAGHPRFLFTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPY-----NNN 180
           RLAGHPRFLFTIKEETKEDLESDDGKSK   KGSRT SLSDLIMALETH+PY     + +
Sbjct: 121 RLAGHPRFLFTIKEETKEDLESDDGKSK---KGSRTTSLSDLIMALETHTPYISPMNSPS 180

Query: 181 NLSPNISSPNKALLFNNSNNY---NNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYR 240
           NL       N    +NN+ NY   NNPLFE+SVEAEI+RLRSSPPPKFKFLRDAEEKLYR
Sbjct: 181 NLKKKSLDSNYNYDYNNNYNYNYNNNPLFESSVEAEISRLRSSPPPKFKFLRDAEEKLYR 240

Query: 241 RLVEEAQKSGVFQ-------------EVILENSLPEQGEKERG-IDCNSQVTPLASSP 268
           RLVEEAQKSG+FQ             E++++N   +  EKER  I CNSQV PLASSP
Sbjct: 241 RLVEEAQKSGIFQEGILDISHEVKKDEILMKNGGEKNKEKEREIIHCNSQVLPLASSP 294
[Close]
BLAST of Spo06980.1 vs. UniProtKB/TrEMBL
Match: A5AT40_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006045 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.300e-64
Identity = 150/249 (60.24%), Postives = 183/249 (73.49%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           M   SGLGI LS+VFGCLLLAL+AELYYLLWWKK+       N  +E DYSN AKE+FY+
Sbjct: 1   MASFSGLGICLSLVFGCLLLALVAELYYLLWWKKR-----ITNREIEYDYSNXAKELFYI 60

Query: 61  FCWDKPTTINT------TVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMR-- 120
           FCW +P  +++      +V D    G+ E D E+G  + KDLLLKA  EEGV+S++MR  
Sbjct: 61  FCWKRPAPLSSSSTQQLSVRDPVPNGHDEQDPELG--SGKDLLLKAFEEEGVESELMRLH 120

Query: 121 -LAGHPRFLFTIKEETKEDLESDDGKSKA--SRKGSRTRSLSDLIMALETHSPYNNNNLS 180
            LAG PRFLFTIKEETKEDLESDDGKSK   SR  SRTRSLSD+++A++T  P+    L+
Sbjct: 121 NLAGPPRFLFTIKEETKEDLESDDGKSKGDRSRTASRTRSLSDVLVAIDT--PF----LT 180

Query: 181 PNISSPNKALLFNNSNNYN----NPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRL 235
           P  S P K+  FN  + Y+    NPLFE+S E+E+NRLRSSPPPKFKFLRDAEEKLYRRL
Sbjct: 181 PLASPPLKSPTFNPLDCYSQHGFNPLFESSAESELNRLRSSPPPKFKFLRDAEEKLYRRL 236
[Close]
BLAST of Spo06980.1 vs. UniProtKB/TrEMBL
Match: M5WLR5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019890mg PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.200e-60
Identity = 144/244 (59.02%), Postives = 179/244 (73.36%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           MT  SGLGI LS+VFGCLLLAL+AELYYLLWWKK+       N  +E+DYSNHAKE+F  
Sbjct: 1   MTSFSGLGIGLSLVFGCLLLALVAELYYLLWWKKR-----ITNREIEEDYSNHAKELFQF 60

Query: 61  FCWDKPTTINTTVVDNAVVGNP-------ETDIEMGLETRKDLLLKALGEEGVD-SDIMR 120
            CW KP+++ T       V  P       E+D+E+G  + KDLLLK  GEE V+ S++MR
Sbjct: 61  SCWKKPSSLQTNSNSQENVREPDANHSSSESDLELG--SSKDLLLKLNGEENVEISELMR 120

Query: 121 ---LAGHPRFLFTIKEETKEDLESDDGKSKA--SRKGSRTRSLSDLIMALETHSPYNNNN 180
              LAG PRFLFTI EETKEDLES+DGKS+   SRKGSRTRSLSDLI++++T  PY +  
Sbjct: 121 LHNLAGPPRFLFTINEETKEDLESEDGKSRGDRSRKGSRTRSLSDLILSVDT--PYLSPL 180

Query: 181 LSPNISSPNKALLFNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVE 232
            SP++ S   + L +  ++  NPLFE+S EAE++RLRSSPPPKFKFLRDAEEKL+RRL+E
Sbjct: 181 PSPSLKSSPLSSLDSYKHHGFNPLFESSTEAELSRLRSSPPPKFKFLRDAEEKLFRRLME 235
[Close]
BLAST of Spo06980.1 vs. UniProtKB/TrEMBL
Match: A0A061H031_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_041865 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.300e-59
Identity = 162/307 (52.77%), Postives = 194/307 (63.19%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSNHAKEMFYL 60
           MT  SGLGI LS+VFGCLLLAL+AELYYLLWWKK RI S+     VE DYSN+AKE+ +L
Sbjct: 1   MTSFSGLGIGLSLVFGCLLLALVAELYYLLWWKK-RIASS----EVEDDYSNYAKELIHL 60

Query: 61  FCWDK--------PTTINTTVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMR 120
           FCW K         TT N  +V +      E D E+G  + KDLLLK  GEEGV+S++MR
Sbjct: 61  FCWKKSAALHATTTTTNNQDLVKDQDTNGVELDPELG--SGKDLLLKGFGEEGVESELMR 120

Query: 121 ---LAGHPRFLFTIKEETKEDLESDDGKSKA--SRKGSRTRSLSDLIMALETHSPYNNNN 180
              LAG PRFLFTIKEETKEDLES+DG+S+   SRKGSRTRSLSDLI+ ++T  P+ +  
Sbjct: 121 LHNLAGPPRFLFTIKEETKEDLESEDGRSRCDRSRKGSRTRSLSDLILTVDT--PFISPL 180

Query: 181 LSPNISSPNKALLFNNSNNYNNPLFETSVEAEINRLRSSPPPKFKFLRDAEEKLYRRLVE 240
            SP + SP    L +      NPLFE+S +AE+N+LRSSPPPKFKFLRDAEEKL RRL+ 
Sbjct: 181 ASPPLKSPPLNPLDSYHRQGFNPLFESSTDAELNKLRSSPPPKFKFLRDAEEKLLRRLML 240

Query: 241 EAQK-----SGVFQE--VILENSLPEQGEKERGI--------------------DCNSQV 268
           EA+K      G  Q+  V   NS     E+  G                       +SQV
Sbjct: 241 EAEKRVQRNGGSLQDSGVKAVNSTASVTEETEGSFLKFIVGKNREPLQYLPQYPSSSSQV 298
[Close]
BLAST of Spo06980.1 vs. TAIR (Arabidopsis)
Match: AT5G59350.1 (unknown protein)

HSP 1 Score: 137.5 bits (345), Expect = 1.200e-32
Identity = 106/245 (43.27%), Postives = 146/245 (59.59%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKK--QRIISNTNNNRVE--QDYSNHAKE 60
           M  +SGLGI LS++FG LLLAL+ E+YYLL  KK  +R+IS  +    E  Q  + +AKE
Sbjct: 1   MKTISGLGIGLSLMFGFLLLALVGEVYYLLRCKKHKKRVISQESEEEKEEEQQQNGYAKE 60

Query: 61  MFYLFCWDKPTTINTTVVDNAVVGNPETDIEMGLETRKDL---LLKAL--GEEGVDSDIM 120
           +  LFC+ KP ++          G  E ++ M  +   DL   L+K L  G+ G ++++M
Sbjct: 61  LIQLFCFKKPQSLQQNN------GGREGEVSMNEDGNPDLELGLMKHLNGGDLGFEAELM 120

Query: 121 RLAGHPRFLFTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALETHSPYNNNNLSPN 180
           +L    RFLFTI EETK DLES+DG        SR RSLSD+       +  N    +P 
Sbjct: 121 KLHNQ-RFLFTIMEETKADLESEDGGKSRLGSRSRRRSLSDV------PNDCNTPGFTP- 180

Query: 181 ISSPNKAL--LFNNSNNYNNPLFETSVEAEIN---RLRSSPPPKFKFLRDAEEKLYRRLV 232
           ++SP K+   L +  ++  NPLFE+  E E N   R  SSPPPKFKF+RDAEEKL +RL+
Sbjct: 181 LASPKKSSSPLESYPHHGFNPLFESDGELEFNKFFRSSSSPPPKFKFMRDAEEKLRKRLI 231
[Close]
BLAST of Spo06980.1 vs. TAIR (Arabidopsis)
Match: AT2G39560.1 (Putative membrane lipoprotein)

HSP 1 Score: 115.5 bits (288), Expect = 4.900e-26
Identity = 97/248 (39.11%), Postives = 134/248 (54.03%), Query Frame = 1 

		  

Query: 1   MTIMSGLGIVLSIVFGCLLLALIAELYYLLWWKKQRIISNTNNNRVEQDYSN-HAKEMFY 60
           M  +S +G+ LSIVFGCLLLAL+AELYYLLW KK+   S T       DYS    +E+ +
Sbjct: 1   MRSLSSVGLALSIVFGCLLLALLAELYYLLWCKKR---STTRRPDFRNDYSTPGTRELLF 60

Query: 61  LFCWDKPTTINTTVVDNAVVGNPETDIEMGLETRKDLLLKALGEEGVDSDIMRLAGHPRF 120
           +FC    T  +++   ++   NP+      ++T++   L   G E V    +     PRF
Sbjct: 61  IFCCSSSTNPSSSSPSSSSFSNPKP-----IDTQQQCPLNN-GFENVGGPGL----VPRF 120

Query: 121 LFTIKEETKEDLESDDGKSKASRKGSRTRSLSDLIMALET---HSPYNNNNLSPNISSPN 180
           LFTI EET E++ES+D     S KG   +SL+DL + +E+     PY     SP++ +P 
Sbjct: 121 LFTIMEETVEEMESED---VVSTKG---KSLNDLFLNMESGVITPPYLTPRASPSLFTPP 180

Query: 181 KALLFNNSNNYN----NPLFETSVEAEINRL------------RSSPPPKFKFLRDAEEK 229
              L   S N      + LFE+S +AE NRL             SSP  +FKFLRDAEEK
Sbjct: 181 LTPLLMESCNGRKEEISSLFESSSDAEFNRLVRSSPLSSSHSPSSSPLSRFKFLRDAEEK 229
The following BLAST results are available for this feature:
BLAST of Spo06980.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902228335|gb|KNA21061.1|1.0e-145100.hypothetical protein SOVF_0464... [more]
gi|731349031|ref|XP_010685790.1|1.1e-9973.1PREDICTED: uncharacterized pro... [more]
gi|870853392|gb|KMT05273.1|3.1e-9971.1hypothetical protein BVRB_7g17... [more]
gi|225434988|ref|XP_002284037.1|3.9e-6560.6PREDICTED: uncharacterized pro... [more]
gi|147810042|emb|CAN69364.1|1.9e-6460.2hypothetical protein VITISV_00... [more]
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BLAST of Spo06980.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RNF9_SPIOL7.0e-146100.Uncharacterized protein OS=Spi... [more]
A0A0J8BZ93_BETVU2.2e-9971.1Uncharacterized protein OS=Bet... [more]
A5AT40_VITVI1.3e-6460.2Putative uncharacterized prote... [more]
M5WLR5_PRUPE1.2e-6059.0Uncharacterized protein OS=Pru... [more]
A0A061H031_THECC1.3e-5952.7Uncharacterized protein isofor... [more]
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BLAST of Spo06980.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06980.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G59350.11.2e-3243.2unknown protein[more]
AT2G39560.14.9e-2639.1Putative membrane lipoprotein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34054FAMILY NOT NAMEDcoord: 2..239
score: 4.4
NoneNo IPR availablePANTHERPTHR34054:SF2SUBFAMILY NOT NAMEDcoord: 2..239
score: 4.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
biological_process GO:0016049 cell growth
biological_process GO:0016043 cellular component organization
biological_process GO:0048869 cellular developmental process
biological_process GO:0060560 developmental growth involved in morphogenesis
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0010015 root morphogenesis
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo131210.71Barchart | Table
Spo156080.69Barchart | Table
Spo094690.68Barchart | Table
Spo143780.68Barchart | Table
Spo049590.67Barchart | Table
Spo257220.66Barchart | Table