Spo07029 (gene)

Overview
NameSpo07029
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_03119 : 5211 .. 7390 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAAATTGACAGTACTGGGATACATTGTCAAATTGTTGCTCTGTTTGTGCTTCCGGTTTGTGCGGTAAGAAAGTGACTATGAAAACAGTAGTATGGTTTCACTACTTTTTACCTATCTTGACTCAAGGATTTTAAGTTCTCATCTGATACAGATAGCTACACTGTCTTCCAGGTATTCACTGTTTTCCAGCCTGCCTGTGATTGGGCATCAGTCTCTCATTCTTCTCCTATAGGATGTTTTATCCTGTGTTTTTCTGTAAGCCTCAAACAAGAAGGCATATGAGCATAACTTTGAGATGTTTCAAAGTTATGGATTCTTTCAATACATTTTTTAGATTTAGTATTCTTAAAAATTGGTATACACTGGAAAAATACAATACACCACTCTGTAATTCTTTCCACTGGATAGTTGAGTTTACTAGCAAAGACAAGTAACAAGTTGCATTAGGCCTTAGAGTTTTGTCTCTTTGTCACATCCCTTTCCTCTTCTGCTGTCTTGCTGTTTCTGCCTGTCTCCCTTACTTACTGGGACTTCGAATTTTATAAAGCTGTTGAATTTGTGACTGACTGGTACTAGTAAGATGTTACACATACTCTTGGGAGATTGAAAATGCTCCATTCTAAAGCCAAAATGAGAAGATACGTTGATGTCAAATGCTTGAATTTGATGCCTTGTGAGGTTTTATGAGGTAGATGTCTGAAGTCAATGTTTTATTTGCTCCCTCTGTACCTCACTACCTCCAGGTTTGGTAGTTCATCTTCATATTGTAATAAACTTCCAGACATGTAATTCATCAGAAGCTCCATCAGTTCAAATTATTCTATTGCAGGCCATGGAAATCCTTTTTCTGTTACTCTGTACAAGAACATTGGATAAATGAGTAAGGTGGGTGTATTCATTCCTGAACCGCTTGATGAAAATTTCATGTTTCATGCAGTTGTTTTGATGTTTTAAAGTTTTGAACACGGCACCTTGCACTGGAACATATCCAGAACATGACACTTGTGGCCCTTGTATTTTGCTTTTGAAGTCTAAGTTTCTTAAAAAAAGAAAAGAAAAAGACATGCTCCCATAACTCCTCCTCTGATAAATGTAAGTATTGAAGATGAACAACATTCTGAAATGTATGGGTCTGTACAAGCTGGACAGTTGGAGTCTGGAATGTGTTCAAGTCTACAGGTTGTCAGGAGATTACCTTCTGTGACATTTTGTTTAAGATCAAGGGATGACCTTCATCTAACTCTGATAGCTGGTATGGCTCGTAGGACTCGATAGTTCTCCAGGTTATTTTTTTCTGTGATCCCTCCTTGATGATCTCTTGGTACGGCAGTACGTGGCACTTTTACCAGACAGTTGAGTTGATGTAGCAAATCAAATTACCAAAGGGGATCACTCATCAATTATGTTGTCAGATTTGGGTTGCAAAAGCATGAGCAGAGTAAACACATTTGTTACTGGTATTGTTTACATTTATTCTCAAGAAAGAGGTTTTCTCTTGTTCTATTCTATATTTCCAGTTATTGGTTGGATTTGTTATACATAGTATTTATTTTTCCCCCTTGGTTACTCTAAATACCAATTTGACGGAAAAGCTATCCAAACCCAATGGATGAACACTGATGTATACGTTGTTTTGCTGTGTTCGTTATATTATACGAAAATATTTTCTTTTATCTGTGTACAGCTAATTTACTTGTATTCACAATTGTTTGTGAAAAGTGTAGCTTGAACTCAAACTAACTCGTGTCAGGTATGAACCAAGCCATATTGGGTCGTGGTGAAGGACCTGGTCGCTCCATGTCGACCCAATGACTATCTGGTAACCCATATGATATCTTTTGTTAAAAAACTAATATCTTGGTGACAGGAAATTCAAATGTAAGCTGCCCACAACCAACTACTTCCTCTGTTTCTTACAGTATCCACCTATTTTGATTTTTGACCAAGTAGGAAGTTTAATCCTAATATACAATTAGGCATGGGTTTAAAGCAAAACTATAGTTTTGTAGGAAGTTTTAATCCTAATTAATTTACAGGACAGAAGCCATTGTTGCCGCAAGCTTAAGTTTCCAGCAGCAAGTGAGCTACCTGCAGCAAATTCTCACCTACCCTTACCTCTAAACATTGCTATCATTTTTGGTACTATTTGTCTACCAAGGTCACAACAGATTTAG

mRNA sequence

ATGAATGAAATTGACAGTACTGGGATACATTGTCAAATTGTTGCTCTGTTTGTGCTTCCGGTTTGTGCGGTATTCACTGTTTTCCAGCCTGCCTGTGATTGGGCATCAGTCTCTCATTCTTCTCCTATAGGATGTTTTATCCTGTGTTTTTCTGCCTTAGAGTTTTGTCTCTTTGTCACATCCCTTTCCTCTTCTGCTGTCTTGCTGTTTCTGCCTGTCTCCCTTACTTACTGGGACTTCGAATTTTATAAAGCTGTTGAATTTGTGACTGACTGGAAATTCAAATGTAAGCTGCCCACAACCAACTACTTCCTCTGTTTCTTACAGTATCCACCTATTTTGATTTTTGACCAAGACAGAAGCCATTGTTGCCGCAAGCTTAAGTTTCCAGCAGCAAGTGAGCTACCTGCAGCAAATTCTCACCTACCCTTACCTCTAAACATTGCTATCATTTTTGGTACTATTTGTCTACCAAGGTCACAACAGATTTAG

Coding sequence (CDS)

ATGAATGAAATTGACAGTACTGGGATACATTGTCAAATTGTTGCTCTGTTTGTGCTTCCGGTTTGTGCGGTATTCACTGTTTTCCAGCCTGCCTGTGATTGGGCATCAGTCTCTCATTCTTCTCCTATAGGATGTTTTATCCTGTGTTTTTCTGCCTTAGAGTTTTGTCTCTTTGTCACATCCCTTTCCTCTTCTGCTGTCTTGCTGTTTCTGCCTGTCTCCCTTACTTACTGGGACTTCGAATTTTATAAAGCTGTTGAATTTGTGACTGACTGGAAATTCAAATGTAAGCTGCCCACAACCAACTACTTCCTCTGTTTCTTACAGTATCCACCTATTTTGATTTTTGACCAAGACAGAAGCCATTGTTGCCGCAAGCTTAAGTTTCCAGCAGCAAGTGAGCTACCTGCAGCAAATTCTCACCTACCCTTACCTCTAAACATTGCTATCATTTTTGGTACTATTTGTCTACCAAGGTCACAACAGATTTAG

Protein sequence

MNEIDSTGIHCQIVALFVLPVCAVFTVFQPACDWASVSHSSPIGCFILCFSALEFCLFVTSLSSSAVLLFLPVSLTYWDFEFYKAVEFVTDWKFKCKLPTTNYFLCFLQYPPILIFDQDRSHCCRKLKFPAASELPAANSHLPLPLNIAIIFGTICLPRSQQI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07029.1Spo07029.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo07029.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07029.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07029.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07029.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0009987 cellular process
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0032040 small-subunit processome
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo100210.67Barchart | Table
Spo031630.66Barchart | Table
Spo031850.65Barchart | Table