Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATTCCTTAAACAACATCATGTCGATCTAACTTGTGTCCAGGTACATTATATATATTCCCAAACTCGTGTAAATTTGAATATTGAATCATCTACTTTTGTTAATTTGATCCATTAATTTATGCAGAGAGCACCTCTGGATGAAGAAGATGGAACGAGTCAATTCAGAAGAGAGGATGAAGATATTATTAGTTCAAGCTGCTTAACTGAAGATGAGAATCAACCAAGGCCACATGTTGTTTCCAAGCTTTCAGAAGTTGCCACATCTTCCATACTTATGAAAAGATCCCATCTCATACGATCCAAGATTGCCAAGCTTAGAATTCCAAGCATGCATGATACGGTGGAAGAAGAGTTCAAGACACCACAACCACCACCACCACCACCACCACCACAAGAGCAAAGTCCAAGCAACGACAATGAAGAAGAAGAAGAAGAAGAAGAAAGTTTCTCAACAGCAGAAGATTCGCTTCTGTCAGAGCATGATTTTATGTGTCCTAAACTAAACTTGTTTGAGGTACATGAGGATTCAGAGTTTGATGAGCCAATATCACACGCAACAATCCATGAGAGGATACAGAGTCATAGAAGAACTAGATCTTACCAGTTGGGTGAACATTTACAGTTCAAATGGACAACAGGAGCAGGGCCTAGGATTGGCTGTGTCAGGGACTATCCTTCTAGGTTGCAATGCCAAGTGCTCGAGCAAGTACAACTGTCTCCAAGGGGTACTAATGTCACTCCTAGGACCCTCAACTATAAACAAACTTTTCCTAGTCAAGAAACTACTGTTTGTCCTGAATAAATCTTTCCAGATGCTCATCACACCTAAAATTTTGGAACTTTGCAGAAAATCTGCTTTAATTATGCCATATAATTCCATGTATCCTCTTCCATTTCTCTTGTTTGATAATGAACAAGTCTATTTAACTAAACAATTAGGCAACAAACTAGATATAATCAACTCTGAAAAACAAAACAAAATAAAACTAGCAGTGATGGAAGACGCTGATTTTTTTTTACCAAACTGGCTTTCTGCTGCAAACTGTACTGCATCGATAATCTCTTTGGATATCATAATATGGCGATGAAGGCAGAAACCATTACTGAAACCTAGAATATCATGCATTTTTGTACATTACATGGTTCGAAGAAAAGGGTACATGTTATGCGGCTATTAGAAATATAAACAGAATTAGGAACATCACACTTATTCCCCATGTTCCTATATCAATTTTTCATATCAAAGGAAATATGACATACTCTGCGTAA ATGTTATTCCTTAAACAACATCATGTCGATCTAACTTGTGTCCAGAGAGCACCTCTGGATGAAGAAGATGGAACGAGTCAATTCAGAAGAGAGGATGAAGATATTATTAGTTCAAGCTGCTTAACTGAAGATGAGAATCAACCAAGGCCACATGTTGTTTCCAAGCTTTCAGAAGTTGCCACATCTTCCATACTTATGAAAAGATCCCATCTCATACGATCCAAGATTGCCAAGCTTAGAATTCCAAGCATGCATGATACGGTGGAAGAAGAGTTCAAGACACCACAACCACCACCACCACCACCACCACCACAAGAGCAAAGTCCAAGCAACGACAATGAAGAAGAAGAAGAAGAAGAAGAAAGTTTCTCAACAGCAGAAGATTCGCTTCTGTCAGAGCATGATTTTATGTGTCCTAAACTAAACTTGTTTGAGGTACATGAGGATTCAGAGTTTGATGAGCCAATATCACACGCAACAATCCATGAGAGGATACAGAGTCATAGAAGAACTAGATCTTACCAGTTGGGTGAACATTTACAGTTCAAATGGACAACAGGAGCAGGGCCTAGGATTGGCTGTGTCAGGGACTATCCTTCTAGGTTGCAATGCCAAGTGCTCGAGCAAGTACAACTGTCTCCAAGGGAATATCATGCATTTTTGTACATTACATGGTTCGAAGAAAAGGGTACATGTTATGCGGCTATTAGAAATATAAACAGAATTAGGAACATCACACTTATTCCCCATGTTCCTATATCAATTTTTCATATCAAAGGAAATATGACATACTCTGCGTAA ATGTTATTCCTTAAACAACATCATGTCGATCTAACTTGTGTCCAGAGAGCACCTCTGGATGAAGAAGATGGAACGAGTCAATTCAGAAGAGAGGATGAAGATATTATTAGTTCAAGCTGCTTAACTGAAGATGAGAATCAACCAAGGCCACATGTTGTTTCCAAGCTTTCAGAAGTTGCCACATCTTCCATACTTATGAAAAGATCCCATCTCATACGATCCAAGATTGCCAAGCTTAGAATTCCAAGCATGCATGATACGGTGGAAGAAGAGTTCAAGACACCACAACCACCACCACCACCACCACCACCACAAGAGCAAAGTCCAAGCAACGACAATGAAGAAGAAGAAGAAGAAGAAGAAAGTTTCTCAACAGCAGAAGATTCGCTTCTGTCAGAGCATGATTTTATGTGTCCTAAACTAAACTTGTTTGAGGTACATGAGGATTCAGAGTTTGATGAGCCAATATCACACGCAACAATCCATGAGAGGATACAGAGTCATAGAAGAACTAGATCTTACCAGTTGGGTGAACATTTACAGTTCAAATGGACAACAGGAGCAGGGCCTAGGATTGGCTGTGTCAGGGACTATCCTTCTAGGTTGCAATGCCAAGTGCTCGAGCAAGTACAACTGTCTCCAAGGGAATATCATGCATTTTTGTACATTACATGGTTCGAAGAAAAGGGTACATGTTATGCGGCTATTAGAAATATAAACAGAATTAGGAACATCACACTTATTCCCCATGTTCCTATATCAATTTTTCATATCAAAGGAAATATGACATACTCTGCGTAA MLFLKQHHVDLTCVQRAPLDEEDGTSQFRREDEDIISSSCLTEDENQPRPHVVSKLSEVATSSILMKRSHLIRSKIAKLRIPSMHDTVEEEFKTPQPPPPPPPPQEQSPSNDNEEEEEEEESFSTAEDSLLSEHDFMCPKLNLFEVHEDSEFDEPISHATIHERIQSHRRTRSYQLGEHLQFKWTTGAGPRIGCVRDYPSRLQCQVLEQVQLSPREYHAFLYITWFEEKGTCYAAIRNINRIRNITLIPHVPISIFHIKGNMTYSA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07057.1 vs. NCBI nr
Match: gi|902173071|gb|KNA08217.1| (hypothetical protein SOVF_164730 [Spinacia oleracea]) HSP 1 Score: 416.8 bits (1070), Expect = 2.900e-113 Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 1
BLAST of Spo07057.1 vs. NCBI nr
Match: gi|731364161|ref|XP_010693824.1| (PREDICTED: uncharacterized protein LOC104906726 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 265.0 bits (676), Expect = 1.400e-67 Identity = 149/225 (66.22%), Postives = 177/225 (78.67%), Query Frame = 1
BLAST of Spo07057.1 vs. NCBI nr
Match: gi|870846180|gb|KMS98775.1| (hypothetical protein BVRB_3g068520 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 265.0 bits (676), Expect = 1.400e-67 Identity = 149/225 (66.22%), Postives = 177/225 (78.67%), Query Frame = 1
BLAST of Spo07057.1 vs. NCBI nr
Match: gi|743907369|ref|XP_011047105.1| (PREDICTED: uncharacterized protein LOC105141558 [Populus euphratica]) HSP 1 Score: 136.7 bits (343), Expect = 5.800e-29 Identity = 97/232 (41.81%), Postives = 132/232 (56.90%), Query Frame = 1
BLAST of Spo07057.1 vs. NCBI nr
Match: gi|848867570|ref|XP_012834435.1| (PREDICTED: uncharacterized protein LOC105955265 [Erythranthe guttata]) HSP 1 Score: 130.2 bits (326), Expect = 5.400e-27 Identity = 88/217 (40.55%), Postives = 119/217 (54.84%), Query Frame = 1
BLAST of Spo07057.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLV0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164730 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 2.000e-113 Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 1
BLAST of Spo07057.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E6F0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g068520 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 9.800e-68 Identity = 149/225 (66.22%), Postives = 177/225 (78.67%), Query Frame = 1
BLAST of Spo07057.1 vs. UniProtKB/TrEMBL
Match: A0A022RM04_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a003149mg PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.800e-27 Identity = 88/217 (40.55%), Postives = 119/217 (54.84%), Query Frame = 1
BLAST of Spo07057.1 vs. UniProtKB/TrEMBL
Match: W9QN77_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014059 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.100e-26 Identity = 84/225 (37.33%), Postives = 124/225 (55.11%), Query Frame = 1
BLAST of Spo07057.1 vs. UniProtKB/TrEMBL
Match: M5VX39_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018709mg PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.200e-25 Identity = 89/230 (38.70%), Postives = 123/230 (53.48%), Query Frame = 1
BLAST of Spo07057.1 vs. ExPASy Swiss-Prot
Match: IQM6_ARATH (IQ domain-containing protein IQM6 OS=Arabidopsis thaliana GN=IQM6 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.100e-23 Identity = 83/230 (36.09%), Postives = 122/230 (53.04%), Query Frame = 1
BLAST of Spo07057.1 vs. ExPASy Swiss-Prot
Match: IQM2_ARATH (IQ domain-containing protein IQM2 OS=Arabidopsis thaliana GN=IQM2 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.100e-16 Identity = 78/217 (35.94%), Postives = 112/217 (51.61%), Query Frame = 1
BLAST of Spo07057.1 vs. ExPASy Swiss-Prot
Match: IQM3_ARATH (IQ domain-containing protein IQM3 OS=Arabidopsis thaliana GN=IQM3 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.600e-10 Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 1
BLAST of Spo07057.1 vs. ExPASy Swiss-Prot
Match: IQM1_ARATH (IQ domain-containing protein IQM1 OS=Arabidopsis thaliana GN=IQM1 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.000e-9 Identity = 39/97 (40.21%), Postives = 51/97 (52.58%), Query Frame = 1
BLAST of Spo07057.1 vs. ExPASy Swiss-Prot
Match: IQM5_ARATH (IQ domain-containing protein IQM5 OS=Arabidopsis thaliana GN=IQM5 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.300e-7 Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 1
BLAST of Spo07057.1 vs. TAIR (Arabidopsis)
Match: AT3G58480.1 (calmodulin-binding family protein) HSP 1 Score: 110.9 bits (276), Expect = 1.200e-24 Identity = 83/230 (36.09%), Postives = 122/230 (53.04%), Query Frame = 1
BLAST of Spo07057.1 vs. TAIR (Arabidopsis)
Match: AT3G13600.1 (calmodulin-binding family protein) HSP 1 Score: 88.6 bits (218), Expect = 6.400e-18 Identity = 78/217 (35.94%), Postives = 112/217 (51.61%), Query Frame = 1
BLAST of Spo07057.1 vs. TAIR (Arabidopsis)
Match: AT3G52870.1 (IQ calmodulin-binding motif family protein) HSP 1 Score: 68.2 bits (165), Expect = 8.900e-12 Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 1
BLAST of Spo07057.1 vs. TAIR (Arabidopsis)
Match: AT4G33050.2 (calmodulin-binding family protein) HSP 1 Score: 63.9 bits (154), Expect = 1.700e-10 Identity = 39/97 (40.21%), Postives = 51/97 (52.58%), Query Frame = 1
BLAST of Spo07057.1 vs. TAIR (Arabidopsis)
Match: AT5G57010.1 (calmodulin-binding family protein) HSP 1 Score: 58.5 bits (140), Expect = 7.100e-9 Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07057.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07057.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07057.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07057.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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