Spo07180 (gene)

Overview
NameSpo07180
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransducin/WD40 repeat protein
LocationSpoScf_09311 : 1035 .. 2156 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGGTTTCAATTCCAGAACGATGAGCTCGAATTTGTCGATGATTTCAATGAGTTTAGTGATTTTGACAACGAGCTGTTAGCTTTTTCCGAGAGCTCTTCGCCGATGAGCAGCCATAGCAACGATGATCCTTTCGATTCCGACGTCGAGGATTACTTTGACATCGTACGTTTTATTCAATTTTGTTGTTAATTTTGTTTAATTTTATCGTCTGAATTTGTAATAATTGATTGATTTTTTTTTGTTTTTGGCGCATTTCTGAAATCAGTGCGAAGGAAAATCGAAAAGTGAAACGACGGCGTTTGAAGCGAAGAATGGGAAAGATATACAGGGAATACCATGGGAGAGGCTTAATTTTTCGAGAGATGGATATCGTGAGACTCGTTTGAAGCAGTATAAGAATTATCAGAGTCTGCCTTCTTCTCGCCTAGACTTGGGAAAGGTCAATTTTGATTTTTGACTTTTTAATTGACTACTGTAAATACTACTCCTACTATGATTATAGATTTGTATTATGTCATTGATTAGGGTAATTTTCTGTGTAAGCATGATACGACCTAGGTTATTTCTTTGCCATGTTCTTGAATTCAACTAAAATAAGTGATCCCATGTTCAATTTACAACTAAAATTAGTTTATTTAAGTTCTGATAAGCAAAAATTAATTGAATACTTCGTATAACGCAGCCTTAACAAGTGAAATTGAGTTTTAATCAGTAGAAACAAATCAGCTAATGGACAGGAGTCACAGGACCAATACAACATTGAATCAATAAATTAGTTAATCTGTAAAAATTAAGCTCAATTAGTTTGAATTAGTAAAAAGCAGTAAGAGTTTTTGAAGTTAAGCTAAAATTAAGTGAAAAGAACAAGACCTGAGTATGTTTGATTTTAAGTTGATTATACTATTTGTTTCGTACAAGTTTTAAAATCTCGAAACTACAACTGAAGATGACAATGGTACCGAATAGTCCCGGTTTTGGCTTTTGAGGTATTCTGGTTCATGTTTGTAATTGTGTAATGTGTTGTAACAGGAGTGCAAGCAAGTTGAGAAAGGCCAAACCTTCTATGATTTTCAGTTCAATACAAGACTTATCAAGTCCACAATTGTGCATTTTCAG

mRNA sequence

ATGGCGGGGTTTCAATTCCAGAACGATGAGCTCGAATTTGTCGATGATTTCAATGAGTTTAGTGATTTTGACAACGAGCTGTTAGCTTTTTCCGAGAGCTCTTCGCCGATGAGCAGCCATAGCAACGATGATCCTTTCGATTCCGACGTCGAGGATTACTTTGACATCTGCGAAGGAAAATCGAAAAGTGAAACGACGGCGTTTGAAGCGAAGAATGGGAAAGATATACAGGGAATACCATGGGAGAGGCTTAATTTTTCGAGAGATGGATATCGTGAGACTCGTTTGAAGCAGTATAAGAATTATCAGAGTCTGCCTTCTTCTCGCCTAGACTTGGGAAAGGAGTGCAAGCAAGTTGAGAAAGGCCAAACCTTCTATGATTTTCAGTTCAATACAAGACTTATCAAGTCCACAATTGTGCATTTTCAG

Coding sequence (CDS)

ATGGCGGGGTTTCAATTCCAGAACGATGAGCTCGAATTTGTCGATGATTTCAATGAGTTTAGTGATTTTGACAACGAGCTGTTAGCTTTTTCCGAGAGCTCTTCGCCGATGAGCAGCCATAGCAACGATGATCCTTTCGATTCCGACGTCGAGGATTACTTTGACATCTGCGAAGGAAAATCGAAAAGTGAAACGACGGCGTTTGAAGCGAAGAATGGGAAAGATATACAGGGAATACCATGGGAGAGGCTTAATTTTTCGAGAGATGGATATCGTGAGACTCGTTTGAAGCAGTATAAGAATTATCAGAGTCTGCCTTCTTCTCGCCTAGACTTGGGAAAGGAGTGCAAGCAAGTTGAGAAAGGCCAAACCTTCTATGATTTTCAGTTCAATACAAGACTTATCAAGTCCACAATTGTGCATTTTCAG

Protein sequence

MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGKSKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVEKGQTFYDFQFNTRLIKSTIVHFQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07180.1Spo07180.1mRNA


Homology
[Close]
BLAST of Spo07180.1 vs. NCBI nr
Match: gi|902197097|gb|KNA13308.1| (hypothetical protein SOVF_115860 isoform B [Spinacia oleracea])

HSP 1 Score: 289.3 bits (739), Expect = 3.800e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1 

		  

Query: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK 60
           MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK
Sbjct: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK 60

Query: 61  SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE 120
           SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE
Sbjct: 61  SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE 120

Query: 121 KGQTFYDFQFNTRLIKSTIVHFQ 144
           KGQTFYDFQFNTRLIKSTIVHFQ
Sbjct: 121 KGQTFYDFQFNTRLIKSTIVHFQ 143
[Close]
BLAST of Spo07180.1 vs. NCBI nr
Match: gi|902197096|gb|KNA13307.1| (hypothetical protein SOVF_115860 isoform A [Spinacia oleracea])

HSP 1 Score: 289.3 bits (739), Expect = 3.800e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1 

		  

Query: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK 60
           MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK
Sbjct: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK 60

Query: 61  SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE 120
           SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE
Sbjct: 61  SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE 120

Query: 121 KGQTFYDFQFNTRLIKSTIVHFQ 144
           KGQTFYDFQFNTRLIKSTIVHFQ
Sbjct: 121 KGQTFYDFQFNTRLIKSTIVHFQ 143
[Close]
BLAST of Spo07180.1 vs. NCBI nr
Match: gi|731312887|ref|XP_010676926.1| (PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 210.3 bits (534), Expect = 2.200e-51
Identity = 111/145 (76.55%), Postives = 128/145 (88.28%), Query Frame = 1 

		  

Query: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSS-PMSSHSNDDPFDSDVEDYFDICEG 60
           MA FQFQNDELE+VD+F +  DFD+ELLAFSESSS PMS+ SN+DPFDSD ED FDI +G
Sbjct: 1   MAQFQFQNDELEYVDNFFDMIDFDDELLAFSESSSSPMSNCSNNDPFDSDFEDDFDI-QG 60

Query: 61  KSKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLP-SSRLDLGKECKQ 120
           KSK++TTA EAK GKD+QGIPWERLNF+RD YRETRLKQYKN++S+P SSR +LGK CKQ
Sbjct: 61  KSKTDTTAIEAKKGKDMQGIPWERLNFTRDKYRETRLKQYKNFESVPSSSREELGKVCKQ 120

Query: 121 VEKGQTFYDFQFNTRLIKSTIVHFQ 144
           V+KG  FYDFQFNTRL+KSTIVHFQ
Sbjct: 121 VKKGYGFYDFQFNTRLVKSTIVHFQ 144
[Close]
BLAST of Spo07180.1 vs. NCBI nr
Match: gi|823234750|ref|XP_012450001.1| (PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 [Gossypium raimondii])

HSP 1 Score: 163.7 bits (413), Expect = 2.400e-37
Identity = 89/139 (64.03%), Postives = 108/139 (77.70%), Query Frame = 1 

		  

Query: 6   FQNDELEF-VDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGKSKSE 65
           FQND+LE+ VDD+ +F DF+++ L F+E   P    ++ D FDSD ED F   E K K++
Sbjct: 4   FQNDDLEYIVDDYYDFDDFEHDDL-FAEPE-PRRDTADFDSFDSDFEDDF---ESKPKTD 63

Query: 66  TTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVEKGQT 125
           T+A EA+NGKDIQGIPWERLNF+RD YRETRL+QYKNY+SL  SR  + KEC QVEKG  
Sbjct: 64  TSAVEARNGKDIQGIPWERLNFTRDKYRETRLRQYKNYESLSGSREGMEKECLQVEKGNA 123

Query: 126 FYDFQFNTRLIKSTIVHFQ 144
           FYDFQFNTRL+KSTIVHFQ
Sbjct: 124 FYDFQFNTRLVKSTIVHFQ 137
[Close]
BLAST of Spo07180.1 vs. NCBI nr
Match: gi|223546979|gb|EEF48476.1| (WD-repeat protein, putative [Ricinus communis])

HSP 1 Score: 163.3 bits (412), Expect = 3.100e-37
Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 1 

		  

Query: 5   QFQNDELEFV-DDFNEFSDFDNELLAFSESSSPMSSHSND-DPFDSDVEDYFDICEGKSK 64
           QF ND+LE+V DD+ +  DF        E   P  + ++D D  DSD ED FD   GK+K
Sbjct: 3   QFHNDDLEYVVDDYYDVVDF--------EFDGPQVAPTHDFDSIDSDFEDDFD--SGKAK 62

Query: 65  SETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVEKG 124
           S+T+A EA+NGKDIQGIPWERLNF+RD YRETRLKQYKNY++L  SR DL KEC QVEKG
Sbjct: 63  SDTSALEARNGKDIQGIPWERLNFTRDKYRETRLKQYKNYENLSRSRQDLHKECLQVEKG 122

Query: 125 QTFYDFQFNTRLIKSTIVHFQ 144
           + FYDFQFNTRL+KSTIVHFQ
Sbjct: 123 KNFYDFQFNTRLVKSTIVHFQ 133
[Close]
BLAST of Spo07180.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1C2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_115860 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.600e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1 

		  

Query: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK 60
           MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK
Sbjct: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK 60

Query: 61  SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE 120
           SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE
Sbjct: 61  SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE 120

Query: 121 KGQTFYDFQFNTRLIKSTIVHFQ 144
           KGQTFYDFQFNTRLIKSTIVHFQ
Sbjct: 121 KGQTFYDFQFNTRLIKSTIVHFQ 143
[Close]
BLAST of Spo07180.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3C9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_115860 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.600e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1 

		  

Query: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK 60
           MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK
Sbjct: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK 60

Query: 61  SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE 120
           SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE
Sbjct: 61  SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE 120

Query: 121 KGQTFYDFQFNTRLIKSTIVHFQ 144
           KGQTFYDFQFNTRLIKSTIVHFQ
Sbjct: 121 KGQTFYDFQFNTRLIKSTIVHFQ 143
[Close]
BLAST of Spo07180.1 vs. UniProtKB/TrEMBL
Match: A0A0D2V5B4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G043300 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.700e-37
Identity = 89/139 (64.03%), Postives = 108/139 (77.70%), Query Frame = 1 

		  

Query: 6   FQNDELEF-VDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGKSKSE 65
           FQND+LE+ VDD+ +F DF+++ L F+E   P    ++ D FDSD ED F   E K K++
Sbjct: 4   FQNDDLEYIVDDYYDFDDFEHDDL-FAEPE-PRRDTADFDSFDSDFEDDF---ESKPKTD 63

Query: 66  TTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVEKGQT 125
           T+A EA+NGKDIQGIPWERLNF+RD YRETRL+QYKNY+SL  SR  + KEC QVEKG  
Sbjct: 64  TSAVEARNGKDIQGIPWERLNFTRDKYRETRLRQYKNYESLSGSREGMEKECLQVEKGNA 123

Query: 126 FYDFQFNTRLIKSTIVHFQ 144
           FYDFQFNTRL+KSTIVHFQ
Sbjct: 124 FYDFQFNTRLVKSTIVHFQ 137
[Close]
BLAST of Spo07180.1 vs. UniProtKB/TrEMBL
Match: B9RJH4_RICCO (WD-repeat protein, putative OS=Ricinus communis GN=RCOM_1034310 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.200e-37
Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 1 

		  

Query: 5   QFQNDELEFV-DDFNEFSDFDNELLAFSESSSPMSSHSND-DPFDSDVEDYFDICEGKSK 64
           QF ND+LE+V DD+ +  DF        E   P  + ++D D  DSD ED FD   GK+K
Sbjct: 3   QFHNDDLEYVVDDYYDVVDF--------EFDGPQVAPTHDFDSIDSDFEDDFD--SGKAK 62

Query: 65  SETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVEKG 124
           S+T+A EA+NGKDIQGIPWERLNF+RD YRETRLKQYKNY++L  SR DL KEC QVEKG
Sbjct: 63  SDTSALEARNGKDIQGIPWERLNFTRDKYRETRLKQYKNYENLSRSRQDLHKECLQVEKG 122

Query: 125 QTFYDFQFNTRLIKSTIVHFQ 144
           + FYDFQFNTRL+KSTIVHFQ
Sbjct: 123 KNFYDFQFNTRLVKSTIVHFQ 133
[Close]
BLAST of Spo07180.1 vs. UniProtKB/TrEMBL
Match: A0A0D2U8K7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G043300 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.200e-37
Identity = 88/139 (63.31%), Postives = 108/139 (77.70%), Query Frame = 1 

		  

Query: 6   FQNDELEF-VDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGKSKSE 65
           FQND+LE+ VDD+ +F DF+++ L F+E   P    ++ D FDSD ED F+    K K++
Sbjct: 4   FQNDDLEYIVDDYYDFDDFEHDDL-FAEPE-PRRDTADFDSFDSDFEDDFE--SKKPKTD 63

Query: 66  TTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVEKGQT 125
           T+A EA+NGKDIQGIPWERLNF+RD YRETRL+QYKNY+SL  SR  + KEC QVEKG  
Sbjct: 64  TSAVEARNGKDIQGIPWERLNFTRDKYRETRLRQYKNYESLSGSREGMEKECLQVEKGNA 123

Query: 126 FYDFQFNTRLIKSTIVHFQ 144
           FYDFQFNTRL+KSTIVHFQ
Sbjct: 124 FYDFQFNTRLVKSTIVHFQ 138
[Close]
BLAST of Spo07180.1 vs. TAIR (Arabidopsis)
Match: AT1G78070.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 7.600e-34
Identity = 79/139 (56.83%), Postives = 103/139 (74.10%), Query Frame = 1 

		  

Query: 6   FQNDELEF-VDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGKSKSE 65
           F N +LE+ VD+F+  +DFD++   F E    ++S S+ D  DSD +  F++ E K+ +E
Sbjct: 4   FDNSDLEYLVDEFH--ADFDDDE-PFGEVD--VTSESDSDFMDSDFD--FELSESKTNNE 63

Query: 66  TTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVEKGQT 125
           T+A EA+NGKDIQGIPWE LN++RD YRE RL  YKN++SL  SR +L KEC QVEKG+ 
Sbjct: 64  TSALEARNGKDIQGIPWESLNYTRDRYRENRLLHYKNFESLFRSREELDKECLQVEKGKN 123

Query: 126 FYDFQFNTRLIKSTIVHFQ 144
           FYDFQFNTRL+KSTI HFQ
Sbjct: 124 FYDFQFNTRLVKSTIAHFQ 135
[Close]
BLAST of Spo07180.1 vs. TAIR (Arabidopsis)
Match: AT1G36070.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 110.9 bits (276), Expect = 6.500e-25
Identity = 60/99 (60.61%), Postives = 74/99 (74.75%), Query Frame = 1 

		  

Query: 49  DVEDYFDICEGKS-KSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSL-- 108
           D  D+ D CE K  +++T+A EA+NGKDIQGI WE   ++RD +RETRLKQY N+ ++  
Sbjct: 6   DDSDFEDDCETKKMETDTSAQEARNGKDIQGIQWEGFKYNRDEFRETRLKQYDNFVNILR 65

Query: 109 PSSRLDLGKECKQ-VEKGQTFYDFQFNTRLIKSTIVHFQ 144
           PSSR  L KE  Q VEKG+ FYDFQFNTRL+ STIVHFQ
Sbjct: 66  PSSREKLDKEHGQVVEKGKNFYDFQFNTRLVTSTIVHFQ 104
[Close]
BLAST of Spo07180.1 vs. TAIR (Arabidopsis)
Match: AT3G13340.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 4.200e-24
Identity = 62/129 (48.06%), Postives = 82/129 (63.57%), Query Frame = 1 

		  

Query: 15  DDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGKSKSETTAFEAKNGK 74
           DD     D D+E+    +         +    DSDVE+ FD    K  ++TTA +A+ GK
Sbjct: 7   DDAEYMEDVDDEMEDVEDDMDEEFRGDDLGASDSDVEE-FDYSNNKV-ADTTAEQARKGK 66

Query: 75  DIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVEKGQTFYDFQFNTRL 134
           DIQGIPW+RLN SR+ YR+TRL+QYKNY+++P+S     K CK  +KG  FYDF  N+R 
Sbjct: 67  DIQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFWRNSRS 126

Query: 135 IKSTIVHFQ 144
           IKSTI+HFQ
Sbjct: 127 IKSTILHFQ 133
[Close]
BLAST of Spo07180.1 vs. TAIR (Arabidopsis)
Match: AT1G55680.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 4.200e-24
Identity = 61/138 (44.20%), Postives = 90/138 (65.22%), Query Frame = 1 

		  

Query: 6   FQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGKSKSET 65
           +Q D+ E+++D ++  D D+    F       S        DSDV++ FD    K  ++T
Sbjct: 4   YQGDDAEYMEDVDDEMDEDDLDEDFRGDDMAAS--------DSDVDE-FDYSNNKI-ADT 63

Query: 66  TAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVEKGQTF 125
           +A +A+ GKDIQGIPW+RL+ +R+ YR+TRL+QYKNY+++P+S    GK+C   +KG  F
Sbjct: 64  SADQARKGKDIQGIPWDRLSITRETYRQTRLEQYKNYENVPNSGESSGKDCMATQKGALF 123

Query: 126 YDFQFNTRLIKSTIVHFQ 144
           YDF  NTR IKS+I+HFQ
Sbjct: 124 YDFWRNTRSIKSSILHFQ 131
[Close]
BLAST of Spo07180.1 vs. TAIR (Arabidopsis)
Match: AT5G56190.2 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.000e-22
Identity = 55/143 (38.46%), Postives = 92/143 (64.34%), Query Frame = 1 

		  

Query: 1   MAGFQFQNDELEFVDDFNEFSDFDNELLAFSESSSPMSSHSNDDPFDSDVEDYFDICEGK 60
           M+ +   + E E++ D  +  D ++++ A  +         + D  DS+VED+  +    
Sbjct: 1   MSDYNGDDLEDEYMADEYDMDDLEDDMNAAFDGR-------DIDASDSEVEDFDQL---N 60

Query: 61  SKSETTAFEAKNGKDIQGIPWERLNFSRDGYRETRLKQYKNYQSLPSSRLDLGKECKQVE 120
             ++T+A +A+NGKDIQGIPW+ L  +R  YR+TRL+QYKNY+++P+S  +  K+C   E
Sbjct: 61  KAADTSAAQARNGKDIQGIPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTE 120

Query: 121 KGQTFYDFQFNTRLIKSTIVHFQ 144
           KG +FY+F+ N+R ++STI+HFQ
Sbjct: 121 KGSSFYEFRRNSRSVRSTILHFQ 133
The following BLAST results are available for this feature:
BLAST of Spo07180.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902197097|gb|KNA13308.1|3.8e-75100.hypothetical protein SOVF_1158... [more]
gi|902197096|gb|KNA13307.1|3.8e-75100.hypothetical protein SOVF_1158... [more]
gi|731312887|ref|XP_010676926.1|2.2e-5176.5PREDICTED: uncharacterized WD ... [more]
gi|823234750|ref|XP_012450001.1|2.4e-3764.0PREDICTED: uncharacterized WD ... [more]
gi|223546979|gb|EEF48476.1|3.1e-3763.8WD-repeat protein, putative [R... [more]
back to top
BLAST of Spo07180.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R1C2_SPIOL2.6e-75100.Uncharacterized protein OS=Spi... [more]
A0A0K9R3C9_SPIOL2.6e-75100.Uncharacterized protein OS=Spi... [more]
A0A0D2V5B4_GOSRA1.7e-3764.0Uncharacterized protein OS=Gos... [more]
B9RJH4_RICCO2.2e-3763.8WD-repeat protein, putative OS... [more]
A0A0D2U8K7_GOSRA8.2e-3763.3Uncharacterized protein OS=Gos... [more]
back to top
BLAST of Spo07180.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo07180.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G78070.17.6e-3456.8Transducin/WD40 repeat-like su... [more]
AT1G36070.16.5e-2560.6Transducin/WD40 repeat-like su... [more]
AT3G13340.14.2e-2448.0Transducin/WD40 repeat-like su... [more]
AT1G55680.14.2e-2444.2Transducin/WD40 repeat-like su... [more]
AT5G56190.21.0e-2238.4Transducin/WD40 repeat-like su... [more]
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0006580 ethanolamine metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006470 protein dephosphorylation
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0008287 protein serine/threonine phosphatase complex
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008235 metalloexopeptidase activity
molecular_function GO:0004177 aminopeptidase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0043565 sequence-specific DNA binding
RNA-Seq Expression