Spo07206 (gene)

Overview
NameSpo07206
Typegene
OrganismSpinacia oleracea (Spinach)
Description50S ribosomal protein L4
LocationSpoScf_03327 : 4295 .. 11868 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACAAACCATCTCAGATCCGGATGAAAGTAAAAGGTTGGGACTGGGAGTAGCAAACATTGACCCAAAGGGCAACCATCTCGGCCTTGACTGAAAGCCCAAACATTGGAACTTGAAATAATAACAAAAAAAAAAGAGACACTCTGCACTTCAAAACTCTTAAACCCATAAACCCAGACAAGCGAAGCAGGTCTGAGAGTGTTTTCCATGGCGAAAAGGATCTTGGCTTCCCTCCACCACCATTTGCTCCGCCCTCATGCTCATCTTCCTTCCCTCGTATGTTTCTTCTCTCCTCCTTTCTCATGTATTTTCTTATCTTCCCCTTAAATCCCCTCTCTCAAAATAGTTGGAATTAATGGTACAGGGTAATGACAAAGAATACTATTTGACACACTTCAGTCGAACTGTTTATGGGTTTTTAGTTAAATTAATATATAATTTTTTTTATGGGAAATGATTAGTTTGATAACTTTGGGGGAAAAATGTTCAGATTATGATTCTAGGTTACAATTTTTTTTTAGTTTATTATGGGGTTTGTGTTAAATTAGGTATAATTAGTTCAACACATGATTAATTAGACAAAAATTTTTGGAGAAATGTTCAGTTTATGATTCTTGGTTTTGCATAACATGTGGTATATCAAAATTAAGCTTCTGAGTTTTTTTGGAATCATGAACATCTTTTTCTTCAGTAACTGTACTGTTAATATAACTTTATTAATGTGTATTAACTTTTCTGGGTTTTGATTGAACAGGGTGTTTCATGTAGTAGACTAATTTCAACAACCACTGTGACTTCAAATTCAAGTAATGATGAAATCCCATCTGATTTACTTATGCCCAAGAAAACTGCTTTCATTCCAGATCGTAATCAAGGTATGTGGTTTGGGGCAGAATTATTTTGCAATGTTTACCAATATAGCATCTATGACTATATAACTGTTGGAAAAGGCACGCTGACATTTCCAAAACTATGTTAACTTGACATTTTCATGTTGTTTCGAATGCTCATTTCGATTTTTATGCTTAACAGTTCATACGGGACTAAACTTGCAAGCTTTTCATAGAATGGTATAGTCTGACACATAGGCATGCACATATATTCAAGACGGGTGGCCGACAGTCGGCTAATTGTAGCTCAGAGCTTATGAGCTTATGGCATCATTAATAACACATTGATGTTAGTGAATGCTTTCCTAGACCCCCGCCCCCCTGCATTTCTCAATCCTCCGTAAAATGTCATAAAACATTAAATTTTAGCTAAAAAGCATCAGTTATAAGTTTAGCTCAACATCAATGTCGAGAGAAAAAAAATTATCTGCCACATCACAATAGTTTTAAGCTGAACTTCATGCAAGATACCATGTGACAGAAATTGGTAACAGCCGAGCCATATGCCGGATCAGTTGTTTCTAGTAATTGAAAAAAATGGAGTATCCAACTTAGCGTAGAGGGACCTGACTGGCCATTATTTCGATCCCTGTTGTTGTATAGCAGTACTAATGGGCCAGTGTATTTGAATACAATATCAACTGAAATGGCAGGCGTATTGGAAGCATGCAAGCATAGAAAACCCACAATTGAGCTTATCACATCTATTGGGGTTACTGTCACTAATCATATGAAATATTCAGGCAAACTAATAGTCGCGGATTCGAACTTCAAAGATAAGAATTATTGATACATACCTTTTAAAGTACTTAGTAGATTTTAAGGAATCCTAGCTATAAACTCTGACCCAAAACCCTATCAAACAATGTAAGGATTTTGGAGCGACACAATCTAATATTACGTATCCCATAACTGTCTAAACATTTACCAACCCTTATATGCCGCCCTAAAGAGTAAGTAAAAGAACCTAGTAGTAATAAACTCTCTTACGCTTTGTTTGGGTAGCAAGATAGAAGGGAAGAAGGAGAGGGAAAGAGGAGGAAGGGGAGGGGTAAAGAGAGGGAGGGGGAAGGCTAATCTCCATTTTCATCCAAATCCCTTCAATTTTGGAGGGGTGGTTTTTATTAAAGAGGGATCTTGTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNTTCCCCCCCCCCCCTCCCTTTCTCTCCATCTTTCTTATCCATACCATGTGTATATATCCTCACTTATCAAAGAAATAATAATAATGAACCGCGATGATCTTGCATCGCATCACGAGGTATGATCAGTAAATAATGGCCGACGTCCATTTAAGATGAACGCAACAATCTTTGGTACTAAAATATTGCTACTAAACTACGTACAGTACACTTCTTTATTAATATTAGTTAGAATGTGACCCCTATTGATACCAATATGTGACCCTTGGCCCATAAGTACCTACAATACTATACCACACTAATTAGTACCAATAGTGGTCGCTTGAGTCCAAAATGGACGCCAACCACTTGTGTCAAAGACTCAACGACTTCCTCATCACATCACACCATGCAATGCTAAACTTTCAAATCTGCCTAAGTTAACCCAGTTTCCAAATACAACAATTGGCTCACAAAAGCCACAAACACCTCAGAATTGCTTCTCTTATTTTCCTTTCTTTCTTGTCATCAGAATCGACGTTCTGACAGAAAATACAACCAAATTAAGCATAGTTAAAAACAATAACTTATAAGTTAAAAATCTAAGTCTGAAACACGAAAATCAAAATCCATCTATCCATCACACACATTCCTACACCCCCTGGCATAATCATTCATAGCCTACTAATTGTTTGAACCTGTTTTTTTTATTCTAATAATTTCCGTCAGAGAATATAAATAATCATGTTCAACAATGGTGGGAAGCAACTCGAATGCATGACTGACGTTTCAATTTAGGTGATTAGTCAAGAATAGCTTTTCAGGTTTTGGATCAAATACTTGAAAGTAAACTTATACTTGGTGAAAATAACAATTATTGCCACTAATTGTGGAGAGATAATTAACACACACAACAAAAAATGAAAAAGATCCTAAATGACACAGTTTAAAACAACAAATAAAAAACATAACTCATTAAATCATCAAATTTAAGCATCACTTTTCACTCTTTATTTTTTGTGGGGATATCACTTTCCACCTACGAAGTAATCACATATTCACACAAATGAACAAAAGAAATTAACTAATTAGTGGCACTACATTCTCAACTTTGAGTGTTTACAATTATCTTCACAGTTACATTTTCCTTGAACCTAGCAATTAATACTTATTAGAGGAGGTCAATTACCTTTTAGATAAATATCATTGTCTTTATTCATTTTTCCCATTACTTCCATTCAAATTCCAATTAACCTTGTCCCTTCAAAAAAAGAAATACTCCATTGTTTTTAGGAACAAAGAAAAATCAGTATGAACAGATGCACTTATATTAAAAAAACCTACTAAAAAAATAGTGGCGGAATAAGGCCCACCCACATAAATAAATTGCAAGATGTAAATGAGCAGTTTACATGATTTAAATTAAATAAAAACAGAAAAAAAAAGGCATAATAAAATCATGACACCGCCAAAAATCATACCAGGTTTAAAAGAAGCAATCTGTCATTAACTTTTTTTCACCATGTTTCGTCACCCTTGATTATGAGGAGAGAGAGAGCGGGAATATGATTAGTGAAAGTGAAGAGGTGAAAATGAAGTGGAAAGGAAGGGGAGCAGTCAAATTTGTTTACAATGAATTTGTTTACAATCATTCCAACTTTCAGTGAAAGAGTGTGAAGTGGTGTATAAAAAAGCGCAAAGCGCAGTAAAGCGATATGAGTCCTAGAGCCTAAGCGCAAGAGTAAGGCGCGTGCTTGATCGTAGTGAAACACACTTTTTAAGAATTAAAGGTTTTTTTACTGTTATGCATATATATCTTACTACAATAACCACAAAAATATATAAACATCCAATTTGCTTCCAAAATATATTACTCTTTGTTTTAACAAAACTAAAGCATATAACATAGTGTTTATCAAGAAACTAGGGCCGGCTGCTGTGAGTCCTGTGACTGTTATCTTCTTATTTTCTTATTTTCCCTTTTCTTTTGGACATTTGGACCACTTTCTGTTGTTAAGGATTAATAGGGTGTAGTCCAAAACACAATAACAATATATAAAAAAAGCTGTCAACGTAAAGTAACAAAAATAATAAAGAATTTCAATGAAGCGCCAAAAAGTGCGCCTTTTGCGCTTCATGCGCTTAAGCGCACCCGCTTTGTCCTATAGCTTGGCGCTTCAGCGCGCTTTTTTAAACACTGGTGTGAAGTAAGTATGTAAGATACTTTTTTTAATGAAAAAGACTGAGAGTACAGCTCATGTTTCTAAAGAAAAGGCCAAAAGGGAGTAGTCATCAGTCGCAGTTGAGGAAGGAAACCACAGTAAGCAAAAGATGTTAGTGTGGGAAAACAATTCATGTGTACATTTTTGGGGAAAGATGATGCCAACGGTTTTTGCTTTAGTTGTAGTTAAAGATATTATGCTTTAATTTGGTTATATATGGTTTCTCAATGTGTATCTATTGTAAAGACAAGACTATGATCAAAGGGTAAATGTGCCGTCACGCAGGGTTGAGCTTATTTGGTCTCACGAACCATTTGAAATTTTAGCTGTAACAAATATTGTATACTCTCAGTGATTGATTTGTTAATAATCTCATGTCTATGCTGTTGCTGATTTGTTGTGTTGTTTGTGTAGGGGTGTACCAGGATGTAGTAATCCCTGTGACAAATTTTCATTTTGAAAATAAGGGACTTATGTCATTAGCTGGGGATGTGTTTGATGTACCAATCAGGAAAGATATTGTTCATAGAGTTGTGAGATGGCAGCTTGCCAAACGTCAACAGGTGATTAATGATTTATATACTTGGAGACTGACCCCCCTCCCCGGGCTCGAATGAGAATGAATAAAATCATAAGATTTAAGGATCAGTTTTCTTGAAATTCACTTGTGTTGTTTTTACTTTTTAGTACCTGATGTCCTTGGTCCTAGATTTTTGTAATGGTTACATATTATGGAAGTAAATACGAGTGCAGCTCAGCATAGACCCCTTTTCTTGTGATCTTCTTCCACAATACGTATCACGACGTAGTACCTGATGTCCTTGGTCCTAGATTTTTGTAATGGTTACATATTATGGAAGTAAATACGAGTGCAGCTCAGCATAGACCCCTTTTCTTGTGATCTTCTTCCACAATACGTATCTTAATAAAGCATGTCGTGTATGGATTTCAGGGAACTCATTCCACTAAAACAATCAGTGAGGTAAGTGGAACTGGGAGAAAGCCGCATCCCCAGAAGGGTACTGGTCGAGCAAGGCAGGGATCACGACGTAGTCCTCATGTAAGGAATATTCTTCTTATTGATCCATTTTTCGGAATTTTTTTCTTTTACTTTACCATGTTGGGTTTGCTTATTAGTAATCGGCGGCTCAGTACTATAGAATAATTTGCCAAATTTTATGGAAAACGATAGATGAGAGGAGGTTCTACCATGCATGGTCCTAAACCACGGAGTCATGCTTTTAAACTAAACAAAAAGGTTCGGCGTTTGGGCTTGAAGATTGCATTATCAGCACGCGCTGCAGAAGGGAAGGTAAGACTCCTTTGCTTCTCTCACAAGATGCATCCAACACATATAGGTGCTCATGAATTTAAGACCATGCAGTATTTTACTGCTTCTGAAGATGTAACAAAGATCTTCTCTGTTCTTCCACCAATCCATCCATATTTTGAATGTGAACCATTTTGTGTCTAACCTTGGATGAATGGATTTGTTGCCTTTTTCTGTTATGACCTAGTTTTTGAGGCAAATTATATGGTGATATCTTATACGGCTCTGTAGTTAATACCTTACAGTTTTTCTTTTTCTTTTTCGGGGGATGGGGGTGACTGAGTGTTCCACTGCTTCAGAAGTGCTTTTAGTCCCGCTGAAGGTTCGCACTTATCTGGTCAAATAAAGTTGTGTAAATTTACTTGCATGTACAATATAGTTTGTAATGGCTTGGACTACTTGATCAGAATCGCCCTTTTTATATATGTAACTACGTTTTCGCTGTGTTTGGGTTGGTCATAATAGTTTGCATCTAAAGTCTGTTTAGATTTAGGGTCAAATGTTAAGGGTGCTTATAAAAAAAATATACTGACATTTGGTTTTGTTTTTTTGCACTCACCGAGCGTAGTTTAATGTTTAGGGGTATATGGTGCACAAATTTAGATAGGAAAGAGGGTGTATTTTTAGTTCTGCAGAAATACAAGGGTATCCAATGAAAATGCCCTGATACTTTTGGTGTATTTGCTACATTGGCTGATTTGTGAATTCTTACAGAAAGAGTTATCTCCCTTCCCTCACTGCTTTACTCAGTTTTAGAGTTATATTTTCTTTAACTTGTCATACCGATCTGCCCACTTGTGAGTTCTTATTTACCAAAATTTGCGTTAATAGTTTAGTTATGTACAGCTTGTGATTTTTGATGACCTGGAGGTCCCTACTCACAAGACCAAAAACATTGTTCATTGGGTCAACGGGCTGGACGATTCAAAGAAATTGCTGTTGGTTGATGATGGTGTTATTAATGAAAAGTTGAAGTTGGCTACACAGAATATACATTACGTTAATGTGTTGCCTTCAATTGTAAGTTGCAGCATTTTATGATCTAATCCTTTTTATGTAAGTGTGTGAACATAACAACTACAGGAAAGTCACAATGTTCCCACCAAACCATACCAAGTCTCATACTCTCCTTGTAGCCTTGCAGAATGTTTCTCTTCTTTCACCGGGGATTGTAAAACCTTTTTTGTTTAAGGGGGCGGGGACTTATTTTAGTTGGTTCCTTATTCGGGTTTCTTGCACATTTTGGTATATTCAAAGTCCCTGCTAATGCTCCATTTGTTTTCCAGGGTTTGAATGTCTACAGTATCTTGCAGCATGACACTTTGGTAATGTCTCGTGCTGCTGTGAACCGGATAGTTGAGCGGATGAACACCCCAATCAAACGGTGAGGATATGAGAATTCGTAGTCATATTTTTTCAGGAGATTTCAAACGACGTACAATTTGGCAGCTAAAAATGGGATGTAGTTTAAAGTTGTTCAAGTTCAACCCATTTCACTTAGCTTAGGATGAAATATACTTGTACTTTCTCTGTATGTGTCAACCAACCTGATTGAACTGTGTGCATGTATTACTTGGCACATTACATGGCTTTTCATGAAGCTGTAAATCGTCTTAGCTCACATGAGCCTTTCCCTGGCTTGTTAATGTGAGCTTGATACTTCAATAAGGAACAAAACCTCTAGATTGTGATTTATAGCTGTTTTTAAGAATTATGATGTGAATCAGTTTCGCTGACTTTCCTGTTTAAAATTGGGAAAATTTGTCAGAAAGGACCTTTTAAAACACAAAAATTGTGAGAAAGGACCTTTTAAAAAAAAAGTTGTGAAAGAAGGCCTAATTGGGTTTTTTTTTGTTGTGAATAAGGACCATAAGCCATATTCCGGTGGTCAACGACTATTTTTCGGCGTTGACCATCACGTGACATGCACGTGTCTTAAATTTTTACAATTTTTTTTGAAAAGTTTCCCTCCATGTTTCCCCC

mRNA sequence

CAACAAACCATCTCAGATCCGGATGAAAGTAAAAGGTTGGGACTGGGAGTAGCAAACATTGACCCAAAGGGCAACCATCTCGGCCTTGACTGAAAGCCCAAACATTGGAACTTGAAATAATAACAAAAAAAAAAGAGACACTCTGCACTTCAAAACTCTTAAACCCATAAACCCAGACAAGCGAAGCAGGTCTGAGAGTGTTTTCCATGGCGAAAAGGATCTTGGCTTCCCTCCACCACCATTTGCTCCGCCCTCATGCTCATCTTCCTTCCCTCGGTGTTTCATGTAGTAGACTAATTTCAACAACCACTGTGACTTCAAATTCAAGTAATGATGAAATCCCATCTGATTTACTTATGCCCAAGAAAACTGCTTTCATTCCAGATCGTAATCAAGGGGTGTACCAGGATGTAGTAATCCCTGTGACAAATTTTCATTTTGAAAATAAGGGACTTATGTCATTAGCTGGGGATGTGTTTGATGTACCAATCAGGAAAGATATTGTTCATAGAGTTGTGAGATGGCAGCTTGCCAAACGTCAACAGGGAACTCATTCCACTAAAACAATCAGTGAGGTAAGTGGAACTGGGAGAAAGCCGCATCCCCAGAAGGGTACTGGTCGAGCAAGGCAGGGATCACGACGTAGTCCTCATATGAGAGGAGGTTCTACCATGCATGGTCCTAAACCACGGAGTCATGCTTTTAAACTAAACAAAAAGGTTCGGCGTTTGGGCTTGAAGATTGCATTATCAGCACGCGCTGCAGAAGGGAAGCTTGTGATTTTTGATGACCTGGAGGTCCCTACTCACAAGACCAAAAACATTGTTCATTGGGTCAACGGGCTGGACGATTCAAAGAAATTGCTGTTGGTTGATGATGGTGTTATTAATGAAAAGTTGAAGTTGGCTACACAGAATATACATTACGTTAATGTGTTGCCTTCAATTGGTTTGAATGTCTACAGTATCTTGCAGCATGACACTTTGGTAATGTCTCGTGCTGCTGTGAACCGGATAGTTGAGCGGATGAACACCCCAATCAAACGGTGAGGATATGAGAATTCGTAGTCATATTTTTTCAGGAGATTTCAAACGACGTACAATTTGGCAGCTAAAAATGGGATGTAGTTTAAAGTTGTTCAAGTTCAACCCATTTCACTTAGCTTAGGATGAAATATACTTGTACTTTCTCTGTATGTGTCAACCAACCTGATTGAACTGTGTGCATGTATTACTTGGCACATTACATGGCTTTTCATGAAGCTGTAAATCGTCTTAGCTCACATGAGCCTTTCCCTGGCTTGTTAATGTGAGCTTGATACTTCAATAAGGAACAAAACCTCTAGATTGTGATTTATAGCTGTTTTTAAGAATTATGATGTGAATCAGTTTCGCTGACTTTCCTGTTTAAAATTGGGAAAATTTGTCAGAAAGGACCTTTTAAAACACAAAAATTGTGAGAAAGGACCTTTTAAAAAAAAAGTTGTGAAAGAAGGCCTAATTGGGTTTTTTTTTGTTGTGAATAAGGACCATAAGCCATATTCCGGTGGTCAACGACTATTTTTCGGCGTTGACCATCACGTGACATGCACGTGTCTTAAATTTTTACAATTTTTTTTGAAAAGTTTCCCTCCATGTTTCCCCC

Coding sequence (CDS)

ATGGCGAAAAGGATCTTGGCTTCCCTCCACCACCATTTGCTCCGCCCTCATGCTCATCTTCCTTCCCTCGGTGTTTCATGTAGTAGACTAATTTCAACAACCACTGTGACTTCAAATTCAAGTAATGATGAAATCCCATCTGATTTACTTATGCCCAAGAAAACTGCTTTCATTCCAGATCGTAATCAAGGGGTGTACCAGGATGTAGTAATCCCTGTGACAAATTTTCATTTTGAAAATAAGGGACTTATGTCATTAGCTGGGGATGTGTTTGATGTACCAATCAGGAAAGATATTGTTCATAGAGTTGTGAGATGGCAGCTTGCCAAACGTCAACAGGGAACTCATTCCACTAAAACAATCAGTGAGGTAAGTGGAACTGGGAGAAAGCCGCATCCCCAGAAGGGTACTGGTCGAGCAAGGCAGGGATCACGACGTAGTCCTCATATGAGAGGAGGTTCTACCATGCATGGTCCTAAACCACGGAGTCATGCTTTTAAACTAAACAAAAAGGTTCGGCGTTTGGGCTTGAAGATTGCATTATCAGCACGCGCTGCAGAAGGGAAGCTTGTGATTTTTGATGACCTGGAGGTCCCTACTCACAAGACCAAAAACATTGTTCATTGGGTCAACGGGCTGGACGATTCAAAGAAATTGCTGTTGGTTGATGATGGTGTTATTAATGAAAAGTTGAAGTTGGCTACACAGAATATACATTACGTTAATGTGTTGCCTTCAATTGGTTTGAATGTCTACAGTATCTTGCAGCATGACACTTTGGTAATGTCTCGTGCTGCTGTGAACCGGATAGTTGAGCGGATGAACACCCCAATCAAACGGTGA

Protein sequence

MAKRILASLHHHLLRPHAHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPDRNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07206.1Spo07206.1mRNA


Homology
[Close]
BLAST of Spo07206.1 vs. NCBI nr
Match: gi|902183024|gb|KNA10030.1| (hypothetical protein SOVF_147820 [Spinacia oleracea])

HSP 1 Score: 551.2 bits (1419), Expect = 1.000e-153
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1 

		  

Query: 1   MAKRILASLHHHLLRPHAHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPD 60
           MAKRILASLHHHLLRPHAHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPD
Sbjct: 1   MAKRILASLHHHLLRPHAHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPD 60

Query: 61  RNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT 120
           RNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT
Sbjct: 61  RNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT 120

Query: 121 ISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIA 180
           ISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIA
Sbjct: 121 ISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIA 180

Query: 181 LSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHY 240
           LSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHY
Sbjct: 181 LSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHY 240

Query: 241 VNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR 281
           VNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR
Sbjct: 241 VNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR 280
[Close]
BLAST of Spo07206.1 vs. NCBI nr
Match: gi|902228600|gb|KNA21178.1| (hypothetical protein SOVF_045660 [Spinacia oleracea])

HSP 1 Score: 492.7 bits (1267), Expect = 4.400e-136
Identity = 254/281 (90.39%), Postives = 264/281 (93.95%), Query Frame = 1 

		  

Query: 1   MAKRILASLHHHLLRPH-AHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIP 60
           MAKRILA+LHHHL+RPH AHLPS  VS SRL+STTTVT  SSN EIPS+LLMPKK+  I 
Sbjct: 1   MAKRILAALHHHLIRPHHAHLPSPAVSYSRLLSTTTVTPYSSNGEIPSNLLMPKKSVSIA 60

Query: 61  DRNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTK 120
           D  QGVYQD+VIPVTNFHFE+KGLM+LAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTK
Sbjct: 61  DHTQGVYQDLVIPVTNFHFEDKGLMALAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTK 120

Query: 121 TISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKI 180
           TISEVSGTGRKPHPQKGTGRARQGS+RS HMRGGSTMHGPKPRSHAFKLNK VRRLGLKI
Sbjct: 121 TISEVSGTGRKPHPQKGTGRARQGSKRSCHMRGGSTMHGPKPRSHAFKLNKMVRRLGLKI 180

Query: 181 ALSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIH 240
           ALSARA EGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDG INEKLKLATQNIH
Sbjct: 181 ALSARATEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGPINEKLKLATQNIH 240

Query: 241 YVNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR 281
           YVNVLPSIGLNVYSILQHDTLVMSR AVNRIVERM+TPIKR
Sbjct: 241 YVNVLPSIGLNVYSILQHDTLVMSRGAVNRIVERMHTPIKR 281
[Close]
BLAST of Spo07206.1 vs. NCBI nr
Match: gi|731347541|ref|XP_010685040.1| (PREDICTED: 39S ribosomal protein L4, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 459.5 bits (1181), Expect = 4.100e-126
Identity = 235/280 (83.93%), Postives = 256/280 (91.43%), Query Frame = 1 

		  

Query: 1   MAKRILASLHHHLLRPHAHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPD 60
           MAK+IL +LH HLLR H   P LGVSCSRL STTTVT NSS+ EIPSDLLMPKK+  I D
Sbjct: 1   MAKKILGALHLHLLRSHHAHPFLGVSCSRLFSTTTVTPNSSDGEIPSDLLMPKKSVSISD 60

Query: 61  RNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT 120
           R+QGVYQD+VIPVTNFHFE+KGLM+LAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT
Sbjct: 61  RSQGVYQDLVIPVTNFHFEDKGLMALAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT 120

Query: 121 ISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIA 180
           ISEVSGTG+KP+PQKGTGRAR GSRRS   RGG+TMHGPKPRSHA KLNKKVRRLGLKIA
Sbjct: 121 ISEVSGTGKKPYPQKGTGRARLGSRRSNQQRGGATMHGPKPRSHAHKLNKKVRRLGLKIA 180

Query: 181 LSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHY 240
           LSARAAEGKL++FDDL VPTHKTKNIV+WV+ ++DSKKLLLVDDG I+EKLKLATQN+HY
Sbjct: 181 LSARAAEGKLLVFDDLTVPTHKTKNIVNWVDEMEDSKKLLLVDDGPISEKLKLATQNLHY 240

Query: 241 VNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR 281
           VNVLPS+GLNVYSIL HDTLVMSR AVNRIVERM+TPI R
Sbjct: 241 VNVLPSVGLNVYSILLHDTLVMSRGAVNRIVERMHTPISR 280
[Close]
BLAST of Spo07206.1 vs. NCBI nr
Match: gi|823223708|ref|XP_012444603.1| (PREDICTED: 39S ribosomal protein L4, mitochondrial isoform X2 [Gossypium raimondii])

HSP 1 Score: 383.6 bits (984), Expect = 2.900e-103
Identity = 198/252 (78.57%), Postives = 219/252 (86.90%), Query Frame = 1 

		  

Query: 29  RLISTTTVTSNSSNDEIPSDLLMPKKTAFIPDRNQGVYQDVVIPVTNFHFENKGLMSLAG 88
           R  STT  T +S+    PSDLL   KT   P+R  G+Y+D+V+PVTNFH E+ GLM LAG
Sbjct: 58  RRFSTTIWTPDSNGGAFPSDLLS-SKTVLTPERTIGLYEDLVVPVTNFHNEDHGLMVLAG 117

Query: 89  DVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPHPQKGTGRARQGSRRSP 148
           DVFDVPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTGRKP  QKG GRAR GS R P
Sbjct: 118 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWQQKGLGRARHGSLRGP 177

Query: 149 HMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLVIFDDLEVPTHKTKNIVH 208
             RGG+TMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKL++F+DLEVPTHKTKNIV+
Sbjct: 178 QFRGGATMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKNIVN 237

Query: 209 WVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNVYSILQHDTLVMSRAAVN 268
           +VN ++++KKLLLVD G INEKLKLATQN+HYVNVLPSIGLNVYSILQHDTLVMSR AVN
Sbjct: 238 YVNQMENTKKLLLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILQHDTLVMSRDAVN 297

Query: 269 RIVERMNTPIKR 281
           RIVERM+TPI R
Sbjct: 298 RIVERMHTPINR 308
[Close]
BLAST of Spo07206.1 vs. NCBI nr
Match: gi|823223702|ref|XP_012444599.1| (PREDICTED: 39S ribosomal protein L4, mitochondrial isoform X1 [Gossypium raimondii])

HSP 1 Score: 383.6 bits (984), Expect = 2.900e-103
Identity = 198/252 (78.57%), Postives = 219/252 (86.90%), Query Frame = 1 

		  

Query: 29  RLISTTTVTSNSSNDEIPSDLLMPKKTAFIPDRNQGVYQDVVIPVTNFHFENKGLMSLAG 88
           R  STT  T +S+    PSDLL   KT   P+R  G+Y+D+V+PVTNFH E+ GLM LAG
Sbjct: 65  RRFSTTIWTPDSNGGAFPSDLLS-SKTVLTPERTIGLYEDLVVPVTNFHNEDHGLMVLAG 124

Query: 89  DVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPHPQKGTGRARQGSRRSP 148
           DVFDVPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTGRKP  QKG GRAR GS R P
Sbjct: 125 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWQQKGLGRARHGSLRGP 184

Query: 149 HMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLVIFDDLEVPTHKTKNIVH 208
             RGG+TMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKL++F+DLEVPTHKTKNIV+
Sbjct: 185 QFRGGATMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKNIVN 244

Query: 209 WVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNVYSILQHDTLVMSRAAVN 268
           +VN ++++KKLLLVD G INEKLKLATQN+HYVNVLPSIGLNVYSILQHDTLVMSR AVN
Sbjct: 245 YVNQMENTKKLLLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILQHDTLVMSRDAVN 304

Query: 269 RIVERMNTPIKR 281
           RIVERM+TPI R
Sbjct: 305 RIVERMHTPINR 315
[Close]
BLAST of Spo07206.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS12_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147820 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 7.200e-154
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1 

		  

Query: 1   MAKRILASLHHHLLRPHAHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPD 60
           MAKRILASLHHHLLRPHAHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPD
Sbjct: 1   MAKRILASLHHHLLRPHAHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPD 60

Query: 61  RNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT 120
           RNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT
Sbjct: 61  RNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT 120

Query: 121 ISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIA 180
           ISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIA
Sbjct: 121 ISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIA 180

Query: 181 LSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHY 240
           LSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHY
Sbjct: 181 LSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHY 240

Query: 241 VNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR 281
           VNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR
Sbjct: 241 VNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR 280
[Close]
BLAST of Spo07206.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNY2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_045660 PE=3 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 3.000e-136
Identity = 254/281 (90.39%), Postives = 264/281 (93.95%), Query Frame = 1 

		  

Query: 1   MAKRILASLHHHLLRPH-AHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIP 60
           MAKRILA+LHHHL+RPH AHLPS  VS SRL+STTTVT  SSN EIPS+LLMPKK+  I 
Sbjct: 1   MAKRILAALHHHLIRPHHAHLPSPAVSYSRLLSTTTVTPYSSNGEIPSNLLMPKKSVSIA 60

Query: 61  DRNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTK 120
           D  QGVYQD+VIPVTNFHFE+KGLM+LAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTK
Sbjct: 61  DHTQGVYQDLVIPVTNFHFEDKGLMALAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTK 120

Query: 121 TISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKI 180
           TISEVSGTGRKPHPQKGTGRARQGS+RS HMRGGSTMHGPKPRSHAFKLNK VRRLGLKI
Sbjct: 121 TISEVSGTGRKPHPQKGTGRARQGSKRSCHMRGGSTMHGPKPRSHAFKLNKMVRRLGLKI 180

Query: 181 ALSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIH 240
           ALSARA EGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDG INEKLKLATQNIH
Sbjct: 181 ALSARATEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGPINEKLKLATQNIH 240

Query: 241 YVNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR 281
           YVNVLPSIGLNVYSILQHDTLVMSR AVNRIVERM+TPIKR
Sbjct: 241 YVNVLPSIGLNVYSILQHDTLVMSRGAVNRIVERMHTPIKR 281
[Close]
BLAST of Spo07206.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C019_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167840 PE=3 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 2.900e-126
Identity = 235/280 (83.93%), Postives = 256/280 (91.43%), Query Frame = 1 

		  

Query: 1   MAKRILASLHHHLLRPHAHLPSLGVSCSRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPD 60
           MAK+IL +LH HLLR H   P LGVSCSRL STTTVT NSS+ EIPSDLLMPKK+  I D
Sbjct: 1   MAKKILGALHLHLLRSHHAHPFLGVSCSRLFSTTTVTPNSSDGEIPSDLLMPKKSVSISD 60

Query: 61  RNQGVYQDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT 120
           R+QGVYQD+VIPVTNFHFE+KGLM+LAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT
Sbjct: 61  RSQGVYQDLVIPVTNFHFEDKGLMALAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKT 120

Query: 121 ISEVSGTGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIA 180
           ISEVSGTG+KP+PQKGTGRAR GSRRS   RGG+TMHGPKPRSHA KLNKKVRRLGLKIA
Sbjct: 121 ISEVSGTGKKPYPQKGTGRARLGSRRSNQQRGGATMHGPKPRSHAHKLNKKVRRLGLKIA 180

Query: 181 LSARAAEGKLVIFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHY 240
           LSARAAEGKL++FDDL VPTHKTKNIV+WV+ ++DSKKLLLVDDG I+EKLKLATQN+HY
Sbjct: 181 LSARAAEGKLLVFDDLTVPTHKTKNIVNWVDEMEDSKKLLLVDDGPISEKLKLATQNLHY 240

Query: 241 VNVLPSIGLNVYSILQHDTLVMSRAAVNRIVERMNTPIKR 281
           VNVLPS+GLNVYSIL HDTLVMSR AVNRIVERM+TPI R
Sbjct: 241 VNVLPSVGLNVYSILLHDTLVMSRGAVNRIVERMHTPISR 280
[Close]
BLAST of Spo07206.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TLV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G181400 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.000e-103
Identity = 198/252 (78.57%), Postives = 219/252 (86.90%), Query Frame = 1 

		  

Query: 29  RLISTTTVTSNSSNDEIPSDLLMPKKTAFIPDRNQGVYQDVVIPVTNFHFENKGLMSLAG 88
           R  STT  T +S+    PSDLL   KT   P+R  G+Y+D+V+PVTNFH E+ GLM LAG
Sbjct: 71  RRFSTTIWTPDSNGGAFPSDLLS-SKTVLTPERTIGLYEDLVVPVTNFHNEDHGLMVLAG 130

Query: 89  DVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPHPQKGTGRARQGSRRSP 148
           DVFDVPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTGRKP  QKG GRAR GS R P
Sbjct: 131 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWQQKGLGRARHGSLRGP 190

Query: 149 HMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLVIFDDLEVPTHKTKNIVH 208
             RGG+TMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKL++F+DLEVPTHKTKNIV+
Sbjct: 191 QFRGGATMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKNIVN 250

Query: 209 WVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNVYSILQHDTLVMSRAAVN 268
           +VN ++++KKLLLVD G INEKLKLATQN+HYVNVLPSIGLNVYSILQHDTLVMSR AVN
Sbjct: 251 YVNQMENTKKLLLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILQHDTLVMSRDAVN 310

Query: 269 RIVERMNTPIKR 281
           RIVERM+TPI R
Sbjct: 311 RIVERMHTPINR 321
[Close]
BLAST of Spo07206.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QIA1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G181400 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.000e-103
Identity = 198/252 (78.57%), Postives = 219/252 (86.90%), Query Frame = 1 

		  

Query: 29  RLISTTTVTSNSSNDEIPSDLLMPKKTAFIPDRNQGVYQDVVIPVTNFHFENKGLMSLAG 88
           R  STT  T +S+    PSDLL   KT   P+R  G+Y+D+V+PVTNFH E+ GLM LAG
Sbjct: 58  RRFSTTIWTPDSNGGAFPSDLLS-SKTVLTPERTIGLYEDLVVPVTNFHNEDHGLMVLAG 117

Query: 89  DVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPHPQKGTGRARQGSRRSP 148
           DVFDVPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTGRKP  QKG GRAR GS R P
Sbjct: 118 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWQQKGLGRARHGSLRGP 177

Query: 149 HMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLVIFDDLEVPTHKTKNIVH 208
             RGG+TMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKL++F+DLEVPTHKTKNIV+
Sbjct: 178 QFRGGATMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKNIVN 237

Query: 209 WVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNVYSILQHDTLVMSRAAVN 268
           +VN ++++KKLLLVD G INEKLKLATQN+HYVNVLPSIGLNVYSILQHDTLVMSR AVN
Sbjct: 238 YVNQMENTKKLLLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILQHDTLVMSRDAVN 297

Query: 269 RIVERMNTPIKR 281
           RIVERM+TPI R
Sbjct: 298 RIVERMHTPINR 308
[Close]
BLAST of Spo07206.1 vs. ExPASy Swiss-Prot
Match: RL4_RHORT (50S ribosomal protein L4 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=rplD PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.500e-48
Identity = 102/196 (52.04%), Postives = 139/196 (70.92%), Query Frame = 1 

		  

Query: 79  ENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPHPQKGTG 138
           ++ G + L+  VF +P+R D++HR+VRWQLA+RQ GTH TK ISE+SGT  KP  QKGTG
Sbjct: 11  KDAGSIELSDSVFGLPVRTDLLHRMVRWQLARRQAGTHKTKGISEISGTTAKPFKQKGTG 70

Query: 139 RARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLVIFDDLEV 198
            ARQGS+RSP  RGG+T+ GP  RSHA  LNKKVR+LGLK ALSA+A  G+L++ D    
Sbjct: 71  HARQGSKRSPQFRGGATIFGPVVRSHAHDLNKKVRKLGLKTALSAKAQAGQLIVLDQAIS 130

Query: 199 PTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNVYSILQHD 258
            + KTK+++  +  L   +K+L +D   +NEK  LA +NI  ++VLP  G NVY IL+ D
Sbjct: 131 ESGKTKDLLAQLKVL-GLEKVLFIDGPEVNEKFALAARNIIGLDVLPQQGANVYDILRRD 190

Query: 259 TLVMSRAAVNRIVERM 275
           TLV+++ AV  + ER+
Sbjct: 191 TLVLTKEAVKHLEERL 205
[Close]
BLAST of Spo07206.1 vs. ExPASy Swiss-Prot
Match: RL4_MAGSA (50S ribosomal protein L4 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplD PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.900e-45
Identity = 100/193 (51.81%), Postives = 131/193 (67.88%), Query Frame = 1 

		  

Query: 82  GLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPHPQKGTGRAR 141
           G + LA ++F VP+R DI+ R V WQLAKRQ G H TKTISE+SGT +KP  QKG GRAR
Sbjct: 14  GEIELADEIFGVPVRGDILFRAVNWQLAKRQSGNHKTKTISEISGTTKKPFAQKGGGRAR 73

Query: 142 QGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLVIFDDLEVPTH 201
           QGS RS   RGGST+ GP  RSHA  L KKVR+L LK ALSA+ A+GKL++ D     + 
Sbjct: 74  QGSLRSAQFRGGSTIFGPVVRSHAHDLPKKVRKLALKTALSAKVADGKLIVVDAASAGSP 133

Query: 202 KTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNVYSILQHDTLV 261
           KTK++   +  L  S  +L +D   ++    LA++NI YV+VLP+ G NVY IL+ DTLV
Sbjct: 134 KTKDLAARLGKLGLS-SVLFIDGAAVDGNFALASRNIPYVDVLPTQGANVYDILRRDTLV 193

Query: 262 MSRAAVNRIVERM 275
           +++ AV  +  R+
Sbjct: 194 LTKDAVAALEARL 205
[Close]
BLAST of Spo07206.1 vs. ExPASy Swiss-Prot
Match: RL4_RHOCS (50S ribosomal protein L4 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rplD PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.400e-44
Identity = 100/202 (49.50%), Postives = 134/202 (66.34%), Query Frame = 1 

		  

Query: 73  VTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPH 132
           V N + E  G + LA +VF +P R+DI+ R+V WQLAKR+QGTH TK ISE++GT +KP 
Sbjct: 5   VKNLNNETVGEIELADEVFGLPTRQDILTRMVLWQLAKRRQGTHKTKGISEIAGTTKKPW 64

Query: 133 PQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLVI 192
            QKGTGRARQGS RSP  RGG+ + GP  RSH   L KKVR+L LK ALS +AAEGKL +
Sbjct: 65  RQKGTGRARQGSTRSPQFRGGARIFGPVVRSHEHDLTKKVRKLALKTALSTKAAEGKLFV 124

Query: 193 FDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNVY 252
            +  +  THKTK +   +  L      L++D   ++E    A +NI +++VLP  G NVY
Sbjct: 125 LEAAKADTHKTKALAAQLKTL-GLTSALIIDGANLDETFVRAARNIPHLDVLPEQGANVY 184

Query: 253 SILQHDTLVMSRAAVNRIVERM 275
            IL+ D LV++R AV ++  R+
Sbjct: 185 DILRRDVLVLTRNAVEQLEARL 205
[Close]
BLAST of Spo07206.1 vs. ExPASy Swiss-Prot
Match: RL4_RICBR (50S ribosomal protein L4 OS=Rickettsia bellii (strain RML369-C) GN=rplD PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.000e-44
Identity = 101/203 (49.75%), Postives = 134/203 (66.01%), Query Frame = 1 

		  

Query: 73  VTNFHFENKGLMSLAGDVFDVP-IRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKP 132
           + N   E  G +SL  D+F V  IR DI+ +VV WQ AK   GTH TKT+SEVSGT +KP
Sbjct: 5   ILNLANEEIGEISLNEDIFAVEFIRDDIIKQVVDWQRAKAMAGTHKTKTVSEVSGTTKKP 64

Query: 133 HPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLV 192
             QKGTG ARQGS RS  MRGG  +HGP  RSHA KL KKVR+LGL  ALS + +EGKL+
Sbjct: 65  FKQKGTGNARQGSLRSVQMRGGGVIHGPVVRSHATKLPKKVRKLGLIHALSEKFSEGKLL 124

Query: 193 IFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNV 252
           + D L++ T KT N+V+ +N     K   ++D   ++    LA QNI+   V+P IG NV
Sbjct: 125 VIDSLKLETPKTSNLVNILNKF-QGKSFFVIDGNEVDVNFSLAAQNIYNTVVVPQIGANV 184

Query: 253 YSILQHDTLVMSRAAVNRIVERM 275
           Y I++H+ +++S+ AVN + ER+
Sbjct: 185 YDIIRHEYVLLSQEAVNVLEERL 206
[Close]
BLAST of Spo07206.1 vs. ExPASy Swiss-Prot
Match: RL4_RICB8 (50S ribosomal protein L4 OS=Rickettsia bellii (strain OSU 85-389) GN=rplD PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.000e-44
Identity = 101/203 (49.75%), Postives = 134/203 (66.01%), Query Frame = 1 

		  

Query: 73  VTNFHFENKGLMSLAGDVFDVP-IRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKP 132
           + N   E  G +SL  D+F V  IR DI+ +VV WQ AK   GTH TKT+SEVSGT +KP
Sbjct: 5   ILNLANEEIGEISLNEDIFAVEFIRDDIIKQVVDWQRAKAMAGTHKTKTVSEVSGTTKKP 64

Query: 133 HPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLV 192
             QKGTG ARQGS RS  MRGG  +HGP  RSHA KL KKVR+LGL  ALS + +EGKL+
Sbjct: 65  FKQKGTGNARQGSLRSVQMRGGGVIHGPVVRSHATKLPKKVRKLGLIHALSEKFSEGKLL 124

Query: 193 IFDDLEVPTHKTKNIVHWVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNV 252
           + D L++ T KT N+V+ +N     K   ++D   ++    LA QNI+   V+P IG NV
Sbjct: 125 VIDSLKLETPKTSNLVNILNKF-QGKSFFVIDGNEVDVNFSLAAQNIYNTVVVPQIGANV 184

Query: 253 YSILQHDTLVMSRAAVNRIVERM 275
           Y I++H+ +++S+ AVN + ER+
Sbjct: 185 YDIIRHEYVLLSQEAVNVLEERL 206
[Close]
BLAST of Spo07206.1 vs. TAIR (Arabidopsis)
Match: AT2G20060.1 (Ribosomal protein L4/L1 family)

HSP 1 Score: 355.5 bits (911), Expect = 2.900e-98
Identity = 182/253 (71.94%), Postives = 213/253 (84.19%), Query Frame = 1 

		  

Query: 28  SRLISTTTVTSNSSNDEIPSDLLMPKKTAFIPDRNQGVYQDVVIPVTNFHFENKGLMSLA 87
           +R +ST+ +T +   D  PSDLL  KKT   PDR  G YQD+VIPVTNF  E KG M LA
Sbjct: 52  NRKLSTSILTPD---DSFPSDLLT-KKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFMVLA 111

Query: 88  GDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPHPQKGTGRARQGSRRS 147
           GDVFDVPIRKDI+H VVRWQLAKRQQGTHSTKT+SEVSGTGRKP  QKGTGRAR G+ R 
Sbjct: 112 GDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLRG 171

Query: 148 PHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLVIFDDLEVPTHKTKNIV 207
           P  RGG  MHGPKPRSHA K+NK+VRRLGLKIAL+ARAAEGKL++FDDL +PTHKTKNIV
Sbjct: 172 PQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGLPTHKTKNIV 231

Query: 208 HWVNGLDDSKKLLLVDDGVINEKLKLATQNIHYVNVLPSIGLNVYSILQHDTLVMSRAAV 267
           ++ N ++++KK+L+V+ G I+EKLKLATQN+HYVN++PSIGLNVYSIL HDTL+MSR AV
Sbjct: 232 NYYNQMENTKKVLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLLMSRDAV 291

Query: 268 NRIVERMNTPIKR 281
           N+IVERM+TPI R
Sbjct: 292 NKIVERMHTPINR 300
[Close]
BLAST of Spo07206.1 vs. TAIR (Arabidopsis)
Match: AT1G07320.1 (ribosomal protein L4)

HSP 1 Score: 100.9 bits (250), Expect = 1.300e-21
Identity = 70/208 (33.65%), Postives = 116/208 (55.77%), Query Frame = 1 

		  

Query: 67  QDVVIPVTNFHFENKGLMSLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSG 126
           Q   +P+ +F  E  G   L          + +VHR +   L  +++GT ST T  EV G
Sbjct: 50  QLATLPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRG 109

Query: 127 TGRKPHPQKGTGRARQGSRRSPHMRGGSTMHGPKPRSHAFKLNKKVRRLGLKIAL-SARA 186
            G KP+ QK TG AR+GS+R+P   GG  + GP+P+  + K+N+K ++L +  AL SA +
Sbjct: 110 GGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAAS 169

Query: 187 AEGKLVIFDDL--EVPTHKTKNIVHWVN--GLDDSKK--LLLVDDGVINEKLKLATQNIH 246
           AEG  ++ ++   +    KTK+ +  +   GLD  +K   L++D   ++E +  +++NI 
Sbjct: 170 AEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMID---VDENVAKSSRNIG 229

Query: 247 YVNVLPSIGLNVYSILQHDTLVMSRAAV 268
            + +L    LN++ IL  D LV++ AAV
Sbjct: 230 TLRMLTPRTLNLFDILNADKLVLTPAAV 254
The following BLAST results are available for this feature:
BLAST of Spo07206.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902183024|gb|KNA10030.1|1.0e-153100.hypothetical protein SOVF_1478... [more]
gi|902228600|gb|KNA21178.1|4.4e-13690.3hypothetical protein SOVF_0456... [more]
gi|731347541|ref|XP_010685040.1|4.1e-12683.9PREDICTED: 39S ribosomal prote... [more]
gi|823223708|ref|XP_012444603.1|2.9e-10378.5PREDICTED: 39S ribosomal prote... [more]
gi|823223702|ref|XP_012444599.1|2.9e-10378.5PREDICTED: 39S ribosomal prote... [more]
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BLAST of Spo07206.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QS12_SPIOL7.2e-154100.Uncharacterized protein OS=Spi... [more]
A0A0K9RNY2_SPIOL3.0e-13690.3Uncharacterized protein OS=Spi... [more]
A0A0J8C019_BETVU2.9e-12683.9Uncharacterized protein OS=Bet... [more]
A0A0D2TLV6_GOSRA2.0e-10378.5Uncharacterized protein OS=Gos... [more]
A0A0D2QIA1_GOSRA2.0e-10378.5Uncharacterized protein OS=Gos... [more]
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BLAST of Spo07206.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL4_RHORT4.5e-4852.050S ribosomal protein L4 OS=Rh... [more]
RL4_MAGSA7.9e-4551.850S ribosomal protein L4 OS=Ma... [more]
RL4_RHOCS1.4e-4449.550S ribosomal protein L4 OS=Rh... [more]
RL4_RICBR3.0e-4449.750S ribosomal protein L4 OS=Ri... [more]
RL4_RICB83.0e-4449.750S ribosomal protein L4 OS=Ri... [more]
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BLAST of Spo07206.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G20060.12.9e-9871.9Ribosomal protein L4/L1 family[more]
AT1G07320.11.3e-2133.6ribosomal protein L4[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002136Ribosomal protein L4/L1ePFAMPF00573Ribosomal_L4coord: 86..272
score: 5.5
IPR01300550S ribosomal protein uL4HAMAPMF_01328_BRibosomal_L4_Bcoord: 79..275
score: 31
IPR01300550S ribosomal protein uL4PANTHERPTHR1074650S RIBOSOMAL PROTEIN L4coord: 8..278
score: 3.7E
IPR01300550S ribosomal protein uL4TIGRFAMsTIGR03953TIGR03953coord: 85..271
score: 1.4
IPR023574Ribosomal protein L4 domainGENE3D3.40.1370.10coord: 125..274
score: 5.8
IPR023574Ribosomal protein L4 domainunknownSSF52166Ribosomal protein L4coord: 71..274
score: 2.62
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score:

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005730 nucleolus
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
RNA-Seq Expression