Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCGGGCACTGGGAGTCTGGGACTATATATAAATGCGTATGGATCACTAATCAGAAGTATAGCTAGCTAGTTAGCTGATTAATTTATATTTTTTTGAAAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAGAAAATGGCGAATCCATTTGGTTCGGTGGTTGATGATGAAAAGTTGGATGAAATGGAAAGGTACATAGGAAAAACAAAAACACAAGAAGATAGAGCAAGAGAAGCAATGCATCTAATAAATGAGGATGATAAGAATTCAAAGGCAGAAGCATATGCAGAGAGTGTTAAGGAATATTATGGTTCGGGTGTATCGACGATGTGCATGGTGTACAATGCAACTGGTGATACACTCACTTATGTTACCGATAACGACTGGTATGGTTTCATTAGCCGAACTCCGTATCCTACTGAGATCGGTAATGGTCAATGGGCAGCCTTCCAACATGTCCATAACACCGGTGCTTCTTCCGGTTCTGAAGCCGCGGTTGTGTACCGCGGTAAGAACAAGGATGGACATGAACGTGACTTTATGCTTTCTTGGTCTACACCTTGGGGTCCTTGGTATAAAAACAAGGTATATATGTAAGAATTAATTGATATTACTACTTTAACTTTAATATGTTTTTAAAATTCGCCATTAACTGACAGTGACAGATACAGAGGGTTTATTTAAGTGGAGTCACGGGACTCCATTTGCATAAACAAAAACTTAAATTTAGTCGATTATTTATTAATTTTTTTAAAAATACTTAATTTCAGTTAATTTTTCATTAAATTTTTAAGTAGTAATTCCACTGTTTATATATATACTTTCTAAATTCTCCATTGTACGTCAACTAACTGTTTTTGTCAAATAATCCGTCTATATAGGCTTACTGTGAGATGGGTGGAGTTGACAGTTTTCAAAGCCGTTGGGATGATATCTATGATAAGTTGAACAATAGTGGCTATTCCGATCATGTAGACCGGGACGGCGTTAAGATAGACGTCGATACAGCAACCGGTGGTGCGCCTATATTTCATGCAACCATCAAGATCCCCTTCAGTTCTTAAATCACCGCCCATCAAGGCATAATCATTTTTCAGTCTTTGTCTTAATTTGTGGTGTACGTACGTTACGTTGTACAACTTGTTTGTTATCCTATATAATTTGTCTGCTTTCTTTTCTTTTCTTCTGTATGTCTTTGTATTATTATTTTTTTTTGAATAATGTACAGTGTGAAGAAGAACAAGGAGTGCATGTATCTTTGTGCCTCTTCACTCTTGTAATAAGCTAAATAATATAATAAATTATGTTTGTGTTCTGCGAATAAC ACCGGGCACTGGGAGTCTGGGACTATATATAAATGCGTATGGATCACTAATCAGAAGTATAGCTAGCTAGTTAGCTGATTAATTTATATTTTTTTGAAAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAGAAAATGGCGAATCCATTTGGTTCGGTGGTTGATGATGAAAAGTTGGATGAAATGGAAAGGTACATAGGAAAAACAAAAACACAAGAAGATAGAGCAAGAGAAGCAATGCATCTAATAAATGAGGATGATAAGAATTCAAAGGCAGAAGCATATGCAGAGAGTGTTAAGGAATATTATGGTTCGGGTGTATCGACGATGTGCATGGTGTACAATGCAACTGGTGATACACTCACTTATGTTACCGATAACGACTGGTATGGTTTCATTAGCCGAACTCCGTATCCTACTGAGATCGGTAATGGTCAATGGGCAGCCTTCCAACATGTCCATAACACCGGTGCTTCTTCCGGTTCTGAAGCCGCGGTTGTGTACCGCGGTAAGAACAAGGATGGACATGAACGTGACTTTATGCTTTCTTGGTCTACACCTTGGGGTCCTTGGTATAAAAACAAGGCTTACTGTGAGATGGGTGGAGTTGACAGTTTTCAAAGCCGTTGGGATGATATCTATGATAAGTTGAACAATAGTGGCTATTCCGATCATGTAGACCGGGACGGCGTTAAGATAGACGTCGATACAGCAACCGGTGGTGCGCCTATATTTCATGCAACCATCAAGATCCCCTTCAGTTCTTAAATCACCGCCCATCAAGGCATAATCATTTTTCAGTCTTTGTCTTAATTTGTGGTGTACGTACGTTACGTTGTACAACTTGTTTGTTATCCTATATAATTTGTCTGCTTTCTTTTCTTTTCTTCTGTATGTCTTTGTATTATTATTTTTTTTTGAATAATGTACAGTGTGAAGAAGAACAAGGAGTGCATGTATCTTTGTGCCTCTTCACTCTTGTAATAAGCTAAATAATATAATAAATTATGTTTGTGTTCTGCGAATAAC ATGGCGAATCCATTTGGTTCGGTGGTTGATGATGAAAAGTTGGATGAAATGGAAAGGTACATAGGAAAAACAAAAACACAAGAAGATAGAGCAAGAGAAGCAATGCATCTAATAAATGAGGATGATAAGAATTCAAAGGCAGAAGCATATGCAGAGAGTGTTAAGGAATATTATGGTTCGGGTGTATCGACGATGTGCATGGTGTACAATGCAACTGGTGATACACTCACTTATGTTACCGATAACGACTGGTATGGTTTCATTAGCCGAACTCCGTATCCTACTGAGATCGGTAATGGTCAATGGGCAGCCTTCCAACATGTCCATAACACCGGTGCTTCTTCCGGTTCTGAAGCCGCGGTTGTGTACCGCGGTAAGAACAAGGATGGACATGAACGTGACTTTATGCTTTCTTGGTCTACACCTTGGGGTCCTTGGTATAAAAACAAGGCTTACTGTGAGATGGGTGGAGTTGACAGTTTTCAAAGCCGTTGGGATGATATCTATGATAAGTTGAACAATAGTGGCTATTCCGATCATGTAGACCGGGACGGCGTTAAGATAGACGTCGATACAGCAACCGGTGGTGCGCCTATATTTCATGCAACCATCAAGATCCCCTTCAGTTCTTAA MANPFGSVVDDEKLDEMERYIGKTKTQEDRAREAMHLINEDDKNSKAEAYAESVKEYYGSGVSTMCMVYNATGDTLTYVTDNDWYGFISRTPYPTEIGNGQWAAFQHVHNTGASSGSEAAVVYRGKNKDGHERDFMLSWSTPWGPWYKNKAYCEMGGVDSFQSRWDDIYDKLNNSGYSDHVDRDGVKIDVDTATGGAPIFHATIKIPFSS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07285.1 vs. NCBI nr
Match: gi|902183406|gb|KNA10107.1| (hypothetical protein SOVF_147470 [Spinacia oleracea]) HSP 1 Score: 441.8 bits (1135), Expect = 6.600e-121 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1
BLAST of Spo07285.1 vs. NCBI nr
Match: gi|731351349|ref|XP_010686991.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 326.6 bits (836), Expect = 3.100e-86 Identity = 152/209 (72.73%), Postives = 173/209 (82.78%), Query Frame = 1
BLAST of Spo07285.1 vs. NCBI nr
Match: gi|1002260005|ref|XP_015634325.1| (PREDICTED: 23 kDa jasmonate-induced protein [Oryza sativa Japonica Group]) HSP 1 Score: 306.2 bits (783), Expect = 4.400e-80 Identity = 141/209 (67.46%), Postives = 171/209 (81.82%), Query Frame = 1
BLAST of Spo07285.1 vs. NCBI nr
Match: gi|125547718|gb|EAY93540.1| (hypothetical protein OsI_15330 [Oryza sativa Indica Group]) HSP 1 Score: 305.8 bits (782), Expect = 5.700e-80 Identity = 141/209 (67.46%), Postives = 171/209 (81.82%), Query Frame = 1
BLAST of Spo07285.1 vs. NCBI nr
Match: gi|255675316|dbj|BAH92589.1| (Os04g0310000 [Oryza sativa Japonica Group]) HSP 1 Score: 288.9 bits (738), Expect = 7.200e-75 Identity = 132/195 (67.69%), Postives = 160/195 (82.05%), Query Frame = 1
BLAST of Spo07285.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS62_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147470 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 4.600e-121 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1
BLAST of Spo07285.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVG2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g186940 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 2.200e-86 Identity = 152/209 (72.73%), Postives = 173/209 (82.78%), Query Frame = 1
BLAST of Spo07285.1 vs. UniProtKB/TrEMBL
Match: A0A0E0GZ02_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 1.800e-80 Identity = 141/209 (67.46%), Postives = 171/209 (81.82%), Query Frame = 1
BLAST of Spo07285.1 vs. UniProtKB/TrEMBL
Match: Q7XXL5_ORYSJ (OSJNBa0024J22.15 protein OS=Oryza sativa subsp. japonica GN=Os04g0310100 PE=4 SV=2) HSP 1 Score: 306.2 bits (783), Expect = 3.000e-80 Identity = 141/209 (67.46%), Postives = 171/209 (81.82%), Query Frame = 1
BLAST of Spo07285.1 vs. UniProtKB/TrEMBL
Match: Q01KW2_ORYSA (H0211A12.12 protein OS=Oryza sativa GN=H0211A12.12 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.000e-80 Identity = 141/209 (67.46%), Postives = 171/209 (81.82%), Query Frame = 1
BLAST of Spo07285.1 vs. ExPASy Swiss-Prot
Match: JI23_HORVU (23 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.300e-27 Identity = 72/187 (38.50%), Postives = 102/187 (54.55%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07285.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07285.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07285.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo07285.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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