Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTCATCATTTTAGACCAATCAGTCACTGAGGAGAGAGAAAGCGAGAGGTTTGAGAAATGGAGAATTCAACAGCAGAAGATGACTTCTCAGTATTTGTATTAGCCTCAGACTTGGGTGTCGACGCTCGCCCTTTCTTAGATTCTTCACAACAAAATACTATTGACCTGCCGGAAACTTGGCACGATTGTCCTTCCTACTTCGCCGACGAAGATTTCTCCGATCTTGAAGCTCGTGATTTCTTCCGGCTTCAAGGGTCCGATAAATCTGGCAATTGTATCTTCCGCATCGTCGGAAAATACTTTCCTGGTAATATTTCGGTTTTTTAATGTTTAACTATGATTTTCTAGGGTTTATTAATCGGATGAAGTTTTTTTGGGGGGGGGGGGGTTTGAATTTCTGGGCTTTGTTTTACGTTAATTGCAGATATCATTTTTTGCTTCTTTTTGTTATGGTTTATAATCGCAATTTTAATTTAATTATGTTTGTTTATATGATTTTTAATGGTGTTGAAGTGCTTGGAATATCACGATTTCATGAATTTTGCTAAATGCAATGATAAATATTCAGTAGTTTATTGGATTTGGGTGTTACTAAATGAACAATTGAGCATAATGCATATACTTCCTCCATTTTTTTTATAATTGCACCATCTTAGATTTCACGCTTGCCAATGTACTATTTTAACCATTAATATCTCTCGTTATACATTTGAAAAAATTATAAAAATTTGATAATTTGAAAGTATATTTTGAGATGAATCTAACAAGATCCCACATGAATATATTTTTCTTTACATATAAATCACAAAAAATATCTATATAAGAATATATAAATAGTGCCAAAACCTAAGATGGTGCAATTAATAAAAAATGGAGGAAGTATATGTTTTAGGGAAGTTTCTGAAAGGGGAAATGATTGCTGTCAATTAATTTTAAGTATAGGTGAGAGAGGAGGGGTATATCGATTAGCGGATAGTCATAATGTGAATAATCTTTTTCCAGTGTTGTTGTTTTCAAGTATTCTGATACGGTTGTGCAATGGGTTTTTTCCAGCCCCGGTTGTCGATTCTGAACGATTGAAGAAGTATGTTTTCTACAAAATCTACACCGAGTTGCCGGAGGGGCCGTTTGGCATTGTTTACATGCATACTACTGTACAGAAGGAGGATAATTCCCCTGGAATGACCATCTTGCGATGGATTTATGAGGATCTCCCTGCTGAAATTAAAGATAGACTTCAAGTCGTTTATTTTCTTCACCCTGGTCTACGGTCAAGGCTTGCCTTTGCGACCCTTGGACGGTTTTTCTTGAGTGGGAAGTGAGTACAATCTTTCTTCGTTTTGCATACTTGATCCAATCGCTTATTAGTTCATGTTTTACATTTGTGTGACTGCATAATTGCTTAAGCATCGAGGTTTAAATGTTTCCTTGGAAGTGTATTGTCGACTCACCTTTGAACATGGGAGCAAGTGGCAACTAGTTGAATTGTGAATTTGATTGACAGACCCTGGTTCTTTTGTTCATGTTTAAATAGATCTTCAAGGTAGTTTGAATTGACCTTCTGTTATCTAGTTCTTGCTTGTAAGAGTACATGTTTTATGGCATAAGCATTGGTTCTCTGGCTGCATTAATGCTATTTTGGTGACCAACTTGATCAAGAGACTAACAAGCTTTCTGAAATAGAATACTAGGGAGTACCGGTGAAGTTTTATACTTCCTCCGTTTCGCAATAGATGCATCATCTCTTTATTCACGTATCCCAACATGTTTCTTTGAACATTAATATCTCTAATTGCGTGTAAGTAAAAATTATAAAAAAAATAATATTTGAAATCTTCACATTAATACGAATTTAACAAGATCTCACTTGACTATGTTTGTTTTTACATAATGTGAAAGAATAATTGTCAAAGTTAGTTAATGAATAGTGTCAAAAAGAGAAACGATGCATCTATTGCGGAACGGAGGAAGTAAGACTTACACTTTGATATCTCCACTGTATGCTTCTGCAGCTGTAGGAGGGGATGTCGTATTGCTGCGTGTTCTGTACCCTGGACAATAGACTGCCGAATGATATTATTTATACGTAGTACTCCCTCCGTATTTTAAAAAGAGATACACTTTTCTTAAACGACCGTATTTTAAAAAGAGATGCACTTTCCTTTTTTGACATGTTTTGGTCCCCACTTCCAATATATTAATATTTCTCTATTTCTTGTGGTCCCCACAATTACCCACATCATCTTTTAACTATAATAAATAATTTACCTATTACCCCACTTTCATATTATTTTAATAAATTCAATTCACTCTCCTAAAATTGTGTGTCGGTCAAAGTGTATTTCTTTTTAAAATACGGAGGGAGTATCATATTAGCCTCTAGGTATCGTAAAATTGAGCCTGTAGCATTTTCTGTTGGAGCAGTGACTAACGAATGTCTTGAAATTGCAAAATACCTAATTTTGTTACCGTCTATCTCAGCAGTCTTGCTTCTTACATCCTTTAGGCTCACCGCTCACATCATTTATAACAGTTTCCTGGTTATTCTGTTTGTATTTCATTTATAAACATTTCCGTTTCAAGATTATAATATTATATGAGTAGTTTTCAAAGCTTGTTTTGTAATCTTTATAATGTTGAGTGTTGAGTAACCATTTCTTTCTGAAATATGCAAGCATGCTTTTCTTATCACTTGGCATCAATATAACTAATGTTAAATTGTTTTTCAGCCTGTATTGGAAAATCAAGTATGTAAGCCGGCTGCAATACCTTTGGGACGATATGAAGAAAGGAGAGATTGAGATCCCGGAGTTTGTGAAAGGTCATGATGACGTACTTGAAAACAGACCACTAACTGACTACGGGATTGAACCTGATCCTTTGAAATTGACTGAGGTTCCTTCCATGTCCTTATCTCTTGGGCGGTATGATTATGAAGAAAGGTGGGCATCTAGGTAGTGCATGTCTTGAAGTGTCAACACATTGTGCCAAAAAAGACTTGGTGAAAAATAACTAGTCATATTATTTAGAGTACATGTAGTTACAGAAGCTATCGTGTAAGTGTGTAACGTAGACATGCAGTAATGTGTCCCATGTAAATTCATGAAGATGGATTTCAAAAGAGCTGCAAGGCGCCATCCCTTCATAATATATTATATATGGTGTAATTTGTATGCATAGTTACTATTGAGTATTGGCTCTTCTAGCTTTGCCTTTGGTTGTAACGCTATTGTAACTCGCGACTTACTTTATAGAAGAGAGAATCAGATTCATTTCAGCTTCCTCAACAAATGTTACCGCGAATTGACCTAGGAAATAAAGGGCGAAAGATTTCTGGAAATGTAAGTATGTCATTGTCCGCCATGGTTGAGACTTGAGAGGTCTATTCTTGGGCCATGGAGGCAAATTGTGTTTATGCCTGTATTCTCATGTTGTTCAGATGATTCCAGTCGATTTAAGTCAAGCTTAAATTCTTGAGGCTATGAATGATCTTGAGAGAGTCAAGTTTAAATTCTTGAGTTCGAAGACTTTGGACTCTGCCG TATTTCATCATTTTAGACCAATCAGTCACTGAGGAGAGAGAAAGCGAGAGGTTTGAGAAATGGAGAATTCAACAGCAGAAGATGACTTCTCAGTATTTGTATTAGCCTCAGACTTGGGTGTCGACGCTCGCCCTTTCTTAGATTCTTCACAACAAAATACTATTGACCTGCCGGAAACTTGGCACGATTGTCCTTCCTACTTCGCCGACGAAGATTTCTCCGATCTTGAAGCTCGTGATTTCTTCCGGCTTCAAGGGTCCGATAAATCTGGCAATTGTATCTTCCGCATCGTCGGAAAATACTTTCCTGCCCCGGTTGTCGATTCTGAACGATTGAAGAAGTATGTTTTCTACAAAATCTACACCGAGTTGCCGGAGGGGCCGTTTGGCATTGTTTACATGCATACTACTGTACAGAAGGAGGATAATTCCCCTGGAATGACCATCTTGCGATGGATTTATGAGGATCTCCCTGCTGAAATTAAAGATAGACTTCAAGTCGTTTATTTTCTTCACCCTGGTCTACGGTCAAGGCTTGCCTTTGCGACCCTTGGACGGTTTTTCTTGAGTGGGAACCTGTATTGGAAAATCAAGTATGTAAGCCGGCTGCAATACCTTTGGGACGATATGAAGAAAGGAGAGATTGAGATCCCGGAGTTTGTGAAAGGTCATGATGACGTACTTGAAAACAGACCACTAACTGACTACGGGATTGAACCTGATCCTTTGAAATTGACTGAGGTTCCTTCCATGTCCTTATCTCTTGGGCGGTATGATTATGAAGAAAGGTGGGCATCTAGGTAGTGCATGTCTTGAAGTGTCAACACATTGTGCCAAAAAAGACTTGGTGAAAAATAACTAGTCATATTATTTAGAGTACATGTAGTTACAGAAGCTATCGTGTAAGTGTGTAACGTAGACATGCAGTAATGTGTCCCATGTAAATTCATGAAGATGGATTTCAAAAGAGCTGCAAGGCGCCATCCCTTCATAATATATTATATATGGTGTAATTTGTATGCATAGTTACTATTGAGTATTGGCTCTTCTAGCTTTGCCTTTGGTTGTAACGCTATTGTAACTCGCGACTTACTTTATAGAAGAGAGAATCAGATTCATTTCAGCTTCCTCAACAAATGTTACCGCGAATTGACCTAGGAAATAAAGGGCGAAAGATTTCTGGAAATGTAAGTATGTCATTGTCCGCCATGGTTGAGACTTGAGAGGTCTATTCTTGGGCCATGGAGGCAAATTGTGTTTATGCCTGTATTCTCATGTTGTTCAGATGATTCCAGTCGATTTAAGTCAAGCTTAAATTCTTGAGGCTATGAATGATCTTGAGAGAGTCAAGTTTAAATTCTTGAGTTCGAAGACTTTGGACTCTGCCG ATGGAGAATTCAACAGCAGAAGATGACTTCTCAGTATTTGTATTAGCCTCAGACTTGGGTGTCGACGCTCGCCCTTTCTTAGATTCTTCACAACAAAATACTATTGACCTGCCGGAAACTTGGCACGATTGTCCTTCCTACTTCGCCGACGAAGATTTCTCCGATCTTGAAGCTCGTGATTTCTTCCGGCTTCAAGGGTCCGATAAATCTGGCAATTGTATCTTCCGCATCGTCGGAAAATACTTTCCTGCCCCGGTTGTCGATTCTGAACGATTGAAGAAGTATGTTTTCTACAAAATCTACACCGAGTTGCCGGAGGGGCCGTTTGGCATTGTTTACATGCATACTACTGTACAGAAGGAGGATAATTCCCCTGGAATGACCATCTTGCGATGGATTTATGAGGATCTCCCTGCTGAAATTAAAGATAGACTTCAAGTCGTTTATTTTCTTCACCCTGGTCTACGGTCAAGGCTTGCCTTTGCGACCCTTGGACGGTTTTTCTTGAGTGGGAACCTGTATTGGAAAATCAAGTATGTAAGCCGGCTGCAATACCTTTGGGACGATATGAAGAAAGGAGAGATTGAGATCCCGGAGTTTGTGAAAGGTCATGATGACGTACTTGAAAACAGACCACTAACTGACTACGGGATTGAACCTGATCCTTTGAAATTGACTGAGGTTCCTTCCATGTCCTTATCTCTTGGGCGGTATGATTATGAAGAAAGGTGGGCATCTAGGTAG MENSTAEDDFSVFVLASDLGVDARPFLDSSQQNTIDLPETWHDCPSYFADEDFSDLEARDFFRLQGSDKSGNCIFRIVGKYFPAPVVDSERLKKYVFYKIYTELPEGPFGIVYMHTTVQKEDNSPGMTILRWIYEDLPAEIKDRLQVVYFLHPGLRSRLAFATLGRFFLSGNLYWKIKYVSRLQYLWDDMKKGEIEIPEFVKGHDDVLENRPLTDYGIEPDPLKLTEVPSMSLSLGRYDYEERWASR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07289.1 vs. NCBI nr
Match: gi|902173954|gb|KNA08334.1| (hypothetical protein SOVF_163500 [Spinacia oleracea]) HSP 1 Score: 515.4 bits (1326), Expect = 5.600e-143 Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 1
BLAST of Spo07289.1 vs. NCBI nr
Match: gi|731324447|ref|XP_010672974.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 448.0 bits (1151), Expect = 1.100e-122 Identity = 212/247 (85.83%), Postives = 230/247 (93.12%), Query Frame = 1
BLAST of Spo07289.1 vs. NCBI nr
Match: gi|590635148|ref|XP_007028558.1| (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 389.4 bits (999), Expect = 4.600e-105 Identity = 188/244 (77.05%), Postives = 212/244 (86.89%), Query Frame = 1
BLAST of Spo07289.1 vs. NCBI nr
Match: gi|645271046|ref|XP_008240730.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Prunus mume]) HSP 1 Score: 386.3 bits (991), Expect = 3.900e-104 Identity = 182/241 (75.52%), Postives = 212/241 (87.97%), Query Frame = 1
BLAST of Spo07289.1 vs. NCBI nr
Match: gi|595806670|ref|XP_007202484.1| (hypothetical protein PRUPE_ppa010499mg [Prunus persica]) HSP 1 Score: 385.6 bits (989), Expect = 6.600e-104 Identity = 181/244 (74.18%), Postives = 214/244 (87.70%), Query Frame = 1
BLAST of Spo07289.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QM49_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_163500 PE=4 SV=1) HSP 1 Score: 515.4 bits (1326), Expect = 3.900e-143 Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 1
BLAST of Spo07289.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FGX8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062490 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 7.600e-123 Identity = 212/247 (85.83%), Postives = 230/247 (93.12%), Query Frame = 1
BLAST of Spo07289.1 vs. UniProtKB/TrEMBL
Match: A0A061EVD9_THECC (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 OS=Theobroma cacao GN=TCM_024410 PE=4 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 3.200e-105 Identity = 188/244 (77.05%), Postives = 212/244 (86.89%), Query Frame = 1
BLAST of Spo07289.1 vs. UniProtKB/TrEMBL
Match: M5W350_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010499mg PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 4.600e-104 Identity = 181/244 (74.18%), Postives = 214/244 (87.70%), Query Frame = 1
BLAST of Spo07289.1 vs. UniProtKB/TrEMBL
Match: D7TIK6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05700 PE=4 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 7.900e-104 Identity = 183/244 (75.00%), Postives = 207/244 (84.84%), Query Frame = 1
BLAST of Spo07289.1 vs. ExPASy Swiss-Prot
Match: GDAP2_XENTR (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.200e-13 Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = 1
BLAST of Spo07289.1 vs. ExPASy Swiss-Prot
Match: GDAP2_HUMAN (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.500e-12 Identity = 51/172 (29.65%), Postives = 82/172 (47.67%), Query Frame = 1
BLAST of Spo07289.1 vs. ExPASy Swiss-Prot
Match: GDAP2_MACFA (Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis GN=GDAP2 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.500e-12 Identity = 51/172 (29.65%), Postives = 82/172 (47.67%), Query Frame = 1
BLAST of Spo07289.1 vs. ExPASy Swiss-Prot
Match: GDAP2_RAT (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus GN=Gdap2 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.500e-12 Identity = 51/172 (29.65%), Postives = 82/172 (47.67%), Query Frame = 1
BLAST of Spo07289.1 vs. ExPASy Swiss-Prot
Match: GDAP2_XENLA (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 4.600e-12 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 1
BLAST of Spo07289.1 vs. TAIR (Arabidopsis)
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein) HSP 1 Score: 362.1 bits (928), Expect = 2.800e-100 Identity = 172/239 (71.97%), Postives = 196/239 (82.01%), Query Frame = 1
BLAST of Spo07289.1 vs. TAIR (Arabidopsis)
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein) HSP 1 Score: 189.1 bits (479), Expect = 3.200e-48 Identity = 85/166 (51.20%), Postives = 117/166 (70.48%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07289.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07289.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07289.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07289.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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