Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGTCAAAGTGCCGGGGATAGCTTTGAGAGGCCGGGGCAATTTGGTAGTAGAGAGAGGCAGGGGCAATTTGACAATAGAGAGAGGAAGGGGCAATTTGACAATAGAGAGAGGCAAGGGTGGGCAGGACACAGTTTTGGTGAGGAAAGAGAAATCACCGAAACTCAATCCAACAGAACTCGGGAAGCATTTGTGTGAGCTTGGAGATCAGTTGTTTACAGGCACCTGTTACTCCAGTCCTAAAAACCACAGAACTAAAGAGCCTAGGCCAAAGGTTAGCCATTTTCGATTTCTTAGCTTGCTACTCCTAACATTTACCAATAAAGTTTTCTTTCGCAAAGTTGATCGCGTTCTTACATGATTCTTTAACTTTGACTAACAGGTACCACCAGCATTCAATATCTATCAGCAACAGGCAGTTGACTTCTTTCTGATAGTCTTTCCAAGATCACCTAGAAAGATGCAAGTAAAGTCTGCCGAGCCAATTCACTGGCAACACACAAATTCGGTTAAGTTTCTACTGTGGGAAAAAACATCTATGGGAAAATATCATCACAACAATTTCAGAAGTTACAGCAAACATCGTTGTAAGAATCCTAACAGTAAATCTACAAAAAACGCGTAAAGCAGGTGTGTGCTGCAGAAACTGGTAGGTGGCATGGACTTGATGTTGTGTTCCCAGTAGCGCATTGCTACCTAAAAGAATGCTTAACAGGGACTACAGGAAGAGGATGACTGATGCCCAAGCTTTGAGTAAGTGTTTTCTCATTATGTTCTTTGGCTATTCAAGGTTCTGAGCTGGTGTACCATATATTTTAATCTGTATTTTGACTTGAGCTTTGAATTTACCTAATTTGGTCAAATAATGAGGCTTATGCGTACTTCATGTAACATTTGCTTAAGGAAAAGCTTTTGTAATTGATAGCCAAATCACATGTGAGTTCTGTCCTCACAGCTAGGGGCGCAAATTGCATGCTCCTCGGCATTACAAACACCCATCTTCTTCAATCTGGTTTTAAACTATAACCTATTATGAGCAGCAAACCATTTCTCTTTTCCCTACTGACAAGATCTGCTGCCTCTCTTTGCTTTCTCTGAGATTTCATCCCTTCCATTTGCGAACCCTACCTGTCATCTCTCCTCCGCCCCCTTAACTTTTCTCTCCTTTTCAGTATCCTTGGATCATCAGGAAATTGGTTTCATCAAGGTAATTCTTTCTCTTTCTTTTAATAATTCAGCCTGTAATTAGTAATGGTGGTCTGAAGTTGATTGGTTGGGAGTACTTGATCGATCGTCTGTAATTAGGATTTATTTCACATTCGGAATTTAAAAAGTTTAAACCTGTAACAAAACCTGTAATAATCATCAAAACGATTAAAATGTGTGGGTTATTTGGACGATTGAACAATTGGAAAATTTGAAGCTGTTTTTGTTAAATCAATTTTTGGCTAACGATTTTCGGAATTTAAAGAGTTAAAACCTGTAATAATCTTCAAAATGATTAAAATGTGTGGCTTATTTGGACGATTGAACAATTAGAAAATTTGAAGCTTTTTTTGTTAAATCAATTTTCGGCTAACAAATTCATAGCATTTCTGAATTAAAATCCGACTAATTATGTTTAAATTTCTTCAATTATTACAGCTGTTTACCTCAAAATCGATCAATTTCTTCAGTTCCCTGGATGAATTCGGAGAGAAGAACAGGTAATTAAATTCATGCGAAAGAGTGGGAAAACGACTGTCATTTATGTTCAATTTCTGGTTGAATTTTCATCAAATCATTGTTAACCTTGTGTACATCGAATCTGCATTTCAGCAATTACAAAGCTCAATCATACAGAAAGAACAACAATACTGAAGAAAAGGAGGAAGAAGAAACTTCAATTACTGGTACTGATCCTTGAAGTCGTCGCAACACCCCGATGATGAAGAATTAAAGTATCAAAAGTATCTATTATTTGCAAGATCTTCAAAAGTACCAGTAAATGCTAAACTTGACCACTTAAAGGTACTTTTCTTTTACTTTTAGTTGGTTATTTAAAGCATATTATAGTCTGAAATATAAATTACCCACAGCAAATGAGTTCCTCCAAAATTTTGCTTCTGAATTGTGCTGTTTACAAGTTTGTGTATTGCTTATTAATGCTCTTTTCGTTGGCTTCCTTAAAGTCTGGCATTATTTATCGGTATAGTGGTTGATCATAAGGCATATGAAACTGTTTAGCATGACTTCGTGTTTGTGAGGTCCACACGAAATAGAGAAGTGGGGAAATAGTCGCGACAGCTGCTTGTTTTTGAGGTAGTAGGCTTGTTGAGTTGTTTTATGCTTGCTATTCTGTCTTATTCTTTCTCTTAGGTTGGATACCTTGATTATTGCAAGAAACGAGGCTTTGTCACCTGCTATATAAGCCCCTGTCCACCAGCGAAGGGAGAAGAATAA ATGCTTGTCAAAGTGCCGGGGATAGCTTTGAGAGGCCGGGGCAATTTGGTAGTAGAGAGAGGCAGGGGCAATTTGACAATAGAGAGAGGAAGGGGCAATTTGACAATAGAGAGAGGCAAGGGTGGGCAGGACACAGTTTTGGTGAGGAAAGAGAAATCACCGAAACTCAATCCAACAGAACTCGGGAAGCATTTGTGTGAGCTTGGAGATCAGTTGTTTACAGGCACCTGTTACTCCAGTCCTAAAAACCACAGAACTAAAGAGCCTAGGCCAAAGGTACCACCAGCATTCAATATCTATCAGCAACAGGCAGTTGACTTCTTTCTGATAGTCTTTCCAAGATCACCTAGAAAGATGCAAGTAAAGTCTGCCGAGCCAATTCACTGGCAACACACAAATTCGGTTAAGTTTCTACTGTGGGAAAAAACATCTATGGGAAAATATCATCACAACAATTTCAGAAGTTACAGCAAACATCGTTTATCCTTGGATCATCAGGAAATTGGTTTCATCAAGCTGTTTACCTCAAAATCGATCAATTTCTTCAGTTCCCTGGATGAATTCGGAGAGAAGAACAGCAATTACAAAGCTCAATCATACAGAAAGAACAACAATACTGAAGAAAAGGAGGAAGAAGAAACTTCAATTACTGTAAATGCTAAACTTGACCACTTAAAGGTTGGATACCTTGATTATTGCAAGAAACGAGGCTTTGTCACCTGCTATATAAGCCCCTGTCCACCAGCGAAGGGAGAAGAATAA ATGCTTGTCAAAGTGCCGGGGATAGCTTTGAGAGGCCGGGGCAATTTGGTAGTAGAGAGAGGCAGGGGCAATTTGACAATAGAGAGAGGAAGGGGCAATTTGACAATAGAGAGAGGCAAGGGTGGGCAGGACACAGTTTTGGTGAGGAAAGAGAAATCACCGAAACTCAATCCAACAGAACTCGGGAAGCATTTGTGTGAGCTTGGAGATCAGTTGTTTACAGGCACCTGTTACTCCAGTCCTAAAAACCACAGAACTAAAGAGCCTAGGCCAAAGGTACCACCAGCATTCAATATCTATCAGCAACAGGCAGTTGACTTCTTTCTGATAGTCTTTCCAAGATCACCTAGAAAGATGCAAGTAAAGTCTGCCGAGCCAATTCACTGGCAACACACAAATTCGGTTAAGTTTCTACTGTGGGAAAAAACATCTATGGGAAAATATCATCACAACAATTTCAGAAGTTACAGCAAACATCGTTTATCCTTGGATCATCAGGAAATTGGTTTCATCAAGCTGTTTACCTCAAAATCGATCAATTTCTTCAGTTCCCTGGATGAATTCGGAGAGAAGAACAGCAATTACAAAGCTCAATCATACAGAAAGAACAACAATACTGAAGAAAAGGAGGAAGAAGAAACTTCAATTACTGTAAATGCTAAACTTGACCACTTAAAGGTTGGATACCTTGATTATTGCAAGAAACGAGGCTTTGTCACCTGCTATATAAGCCCCTGTCCACCAGCGAAGGGAGAAGAATAA MLVKVPGIALRGRGNLVVERGRGNLTIERGRGNLTIERGKGGQDTVLVRKEKSPKLNPTELGKHLCELGDQLFTGTCYSSPKNHRTKEPRPKVPPAFNIYQQQAVDFFLIVFPRSPRKMQVKSAEPIHWQHTNSVKFLLWEKTSMGKYHHNNFRSYSKHRLSLDHQEIGFIKLFTSKSINFFSSLDEFGEKNSNYKAQSYRKNNNTEEKEEEETSITVNAKLDHLKVGYLDYCKKRGFVTCYISPCPPAKGEE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07290.1 vs. NCBI nr
Match: gi|902184606|gb|KNA10321.1| (hypothetical protein SOVF_145430 [Spinacia oleracea]) HSP 1 Score: 121.3 bits (303), Expect = 2.400e-24 Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 1
BLAST of Spo07290.1 vs. NCBI nr
Match: gi|902236127|gb|KNA24232.1| (hypothetical protein SOVF_017790 [Spinacia oleracea]) HSP 1 Score: 115.2 bits (287), Expect = 1.700e-22 Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1
BLAST of Spo07290.1 vs. NCBI nr
Match: gi|870855687|gb|KMT07403.1| (hypothetical protein BVRB_6g150290 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 95.1 bits (235), Expect = 1.800e-16 Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 1
BLAST of Spo07290.1 vs. NCBI nr
Match: gi|731343062|ref|XP_010682705.1| (PREDICTED: MACPF domain-containing protein At1g14780 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 94.4 bits (233), Expect = 3.100e-16 Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 1
BLAST of Spo07290.1 vs. NCBI nr
Match: gi|590697814|ref|XP_007045544.1| (MAC/Perforin domain-containing protein, putative [Theobroma cacao]) HSP 1 Score: 79.0 bits (193), Expect = 1.400e-11 Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 1
BLAST of Spo07290.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUZ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_145430 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.700e-24 Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 1
BLAST of Spo07290.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZE6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_017790 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.200e-22 Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1
BLAST of Spo07290.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C5R4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g150290 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.300e-16 Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 1
BLAST of Spo07290.1 vs. UniProtKB/TrEMBL
Match: A0A061E8T4_THECC (MAC/Perforin domain-containing protein, putative OS=Theobroma cacao GN=TCM_011285 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.500e-12 Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 1
BLAST of Spo07290.1 vs. UniProtKB/TrEMBL
Match: C0P7M1_MAIZE (Uncharacterized protein OS=Zea mays GN=LOC100192049 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.200e-11 Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 1
BLAST of Spo07290.1 vs. ExPASy Swiss-Prot
Match: MACP1_ARATH (MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana GN=At1g14780 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.400e-8 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1
BLAST of Spo07290.1 vs. ExPASy Swiss-Prot
Match: HAC5_ARATH (Histone acetyltransferase HAC5 OS=Arabidopsis thaliana GN=HAC5 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.300e-6 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 1
BLAST of Spo07290.1 vs. ExPASy Swiss-Prot
Match: HAC4_ARATH (Histone acetyltransferase HAC4 OS=Arabidopsis thaliana GN=HAC4 PE=2 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 2.900e-6 Identity = 19/27 (70.37%), Postives = 23/27 (85.19%), Query Frame = 1
BLAST of Spo07290.1 vs. TAIR (Arabidopsis)
Match: AT1G14780.1 (MAC/Perforin domain-containing protein) HSP 1 Score: 59.7 bits (143), Expect = 3.000e-9 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1
BLAST of Spo07290.1 vs. TAIR (Arabidopsis)
Match: AT3G12980.1 (histone acetyltransferase of the CBP family 5) HSP 1 Score: 54.3 bits (129), Expect = 1.300e-7 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 1
BLAST of Spo07290.1 vs. TAIR (Arabidopsis)
Match: AT1G55970.1 (histone acetyltransferase of the CBP family 4) HSP 1 Score: 53.9 bits (128), Expect = 1.700e-7 Identity = 19/27 (70.37%), Postives = 23/27 (85.19%), Query Frame = 1
BLAST of Spo07290.1 vs. TAIR (Arabidopsis)
Match: AT1G16710.1 (histone acetyltransferase of the CBP family 12) HSP 1 Score: 50.8 bits (120), Expect = 1.400e-6 Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 1
BLAST of Spo07290.1 vs. TAIR (Arabidopsis)
Match: AT1G79000.2 (histone acetyltransferase of the CBP family 1) HSP 1 Score: 50.8 bits (120), Expect = 1.400e-6 Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07290.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07290.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07290.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo07290.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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