Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAATTACGCCCCTACCATTACCAGCTGTTAGTTTTTCATTAACAAATGATCCAGGTGTCCCCCTTCCCTGTCTTCGTCCTCCTGCGTCCTTCTACTTCCCCCCTCTGCAATGGCGTTCTTCACCTTTCTCGGTTTTTCCTCTCCATCTTCCATTGTCTTCGTACAGCTCCACTATCTTCTCTCTCCTTTGCCTATTTCCTCCTCTATCTTCTCTCTCCTTTGCCTATTTCCTAGCAATACTATGGATTAACAGCAAACCCTAAATCCCAAAGTGGTGAGAGAAAGCTTCAAAAGCTTCGTCAATGGCTTCCACAACAAGCATAGCTCTTTTCCTCTCTCTCAAACCCTTTCAACTTCCTTACCAACACCAAAACCACCTCCATTTTCTACCTCCTCCTCTTCCATCTCCCCGCTCTTTTCACTCTGCAGCCTCCATTTCTTACCGTCGAATCGCATCATTGGATGCCTCGTATCCGGCGTCGGAGGTGGTGGACTTTCCGATACACGGAAATTGGAATTTTCTAGAGAGTTTGCCGTTATCGCCACCATGTTGAAACGCATCGAACCTCTTGATACATTTGATATTTCCAAAGGTGTTTCTGATTCTGCCAAGGATTCTATGAAATAGACGATTTCTACAATGCTCGGACTTTTGCCGTCTGATCAGTTCTCTGTTTCTGTTAGGGTTTCGAAGGTTCCTTTTCATCACCTCCTCGCCTCTTCCATCATAACTGGGTACTGCATTTTCTCTTGCTTAATGATTTTTTTTTTAAAAATATTTTATTGTTTTGATAATGGTAGGAAATGCTAATTTTGTGGCGATGTTGGATGAATTGTATTTTTTTTATCATGGAGTTGCTAAATTTCCGATTGTAAAATATTTGATTAGGTGGATCATTGGAGGTCTGCCATGAATTTTGGATGAATTGTGATTTTGATTGTTGAATCGACTATTTCGGATGAGCAGGTGTTGAATATTTAATCGATGAAATTCGGATTGCCAGTTGTTGATTTGGTCTTAGGAGTGCATGTTAAAAACTGAAATGATCAGTTGAATTCTGTTTTTGATTGTGGAATTGGTGTGTTTGGATAGATAATGCTACTTTTTAGAGATCAGTTTGAGTAATTTTGTGATTTTATTGTGTAATTTGTTGGATTTCTGAATGTTGTGTATTTTAAGTGGTGGTGATGAATTCGCAGTGAATTGTGTCTGTGATTTAGGGGCTTTTATTTTCTTTTGGAATTTGGTGCTTGATTAGTTCTAGAATGATAATTATGTTGCCTCTTATTTCTCCGTTGTCCGAGCTTTGAATTGATAAGGTTTTGACCTTAAACACATTTTTCAACTAGAATTTTTCAGTGAATTTTGTGTATGAGTGTGATGTTGAAAATCGGTGAATTTAGATAGAAAATGCTACCTATTGAGATGAATATGGAGCTTATTATTTTTGGAATTTAGTAATTGCTATACTGAAAGATAATGGAGTGTGTGGAGGTACAACTCTTATTCGGTTGTGTTTGTAATTGTAGTTAGATCAATTGGATATTGACTGGTTTTGATGAGGAATGTAAGTTGATGGGGCTAGGGACTAGAAAGTAGAGGCCATGGGGACAAAGAGATATAGATCTCTTTTAGGAGGTCATCAACCGCATAAAGATTTTCTAATATTTACAAAGCTGTGAAAAACGAGTGAGAGAAAAGTGAGAGCTGGAAAGTACAGAGACAAAAGTCGACGGTTGGATGGGAAAAGATAGGGGGAGGGAGGGGAAGGTGAGGAGGCACTAAAGAGTTATTAAAATGATTATCAAGAATTAGGTAAACAACAACATATTTCTTAAGGAAACTAAGCGGCCACGTAAGGCTTGAAAATATAGGTTGTCCCTCTACAATACGGAGTATATGTTTTGCCTTGTTTCTTAACAGATCAATACAGGATCTTCTGTTCATTTTTTGGTGAAAGGATCTTCTCTTCCTAGATGTGTTTATATTTAACTTATTAATGTTACACTTAGCTAATTGGTGGTACATTGAAAGTTTGAGACTAGGATATATAGAGTGCAAATCAAATTAACGCAGTTTCAGTTCTTGAATGCCCAACTGACTGATTAACTCTTTGGTACAGGTAGAACTGCTAATTTTATCCTTCTATTTCAATTTATATATCTGGTTCTTTAATATCACGGTCATATTATGTATGGTGGTTGTTTGCAATAGCCTGCTAAGTATAATTGATGGTGTTTTGCTATGTTGCAGGGCTCCTGAGCTTCTTCTTGGAGCTAAAGAGTACTCAACAGCGGTGGATATGTGGTCAGTGGTTTGCATAATGGCGGAACTGCTAACCAATAAACCATTGTTTGATGAAAATATTGAGGTTGAGCAGATTGGCAAGGCAGGCCTTTGTCTCTTCTGGTTGCCATCTTTCTGATCCACGGTCTTGTCTTTTACCTTATCTTTTGGTGCTCGTTTTTTTTAATGTGTTCAATGGCCCTTTGCAGATATTCAGAACACTGGGCACACCTACTGACAAGATTTGGCCGAAATATTCTCAATTGCCTGGGGTTAAGGCTAACTTTGTACACAAATCGTGAGTATTGGTTTTCATGTTGTTTCATTATGCTTTACTGTTATGACTTATTATCCCGGTTTAAGATGTTGTTCCTACTATTTCATTAAAATTCTGGTTTCAGGTCTAATCAATTGCATAAGAAGTTCCCTCGTGCATCTATTACAGGCTCTCCTGTACTTTCTGACTCAGGGCTTGACTTGCCGAGCCGGCTATTGACATATTGTGTGTTTCCTGTGGGAAATGTCTCCGTAAGAGATTTGATTAAAGGTATTCCTTGGTTGTCAGATTTTTTTTGGATGTTCTTGATATCTGTTCATCATCTATTTATTGCTCTCTTCTAAATTTGATTGTATACTCTTCAGTTTGAAATGAATAATAAGATACGAAGAATTTCTTAGACTATTATTAGCTAAACGCTGAACCGAATGTCTGTTTATTTTTGCCTTATTTGAAAAATCTGTAAATAAAGGGCCTTTAATTTGACCGACCATAGACCTTAACTCTTTGTATACGTTGTATTTTACTAGATGGTCATATGACATTATGCACAAGGATTCATAAACTTTTGTTTGTTTGAAATCTATTTGTCACTTCTTTTATGCCCCCTTTTGTTTGGCCTTCGTTTACTTTGCTTATTGTTGGCTCGTTTTATACAGTAAAAGCCCCAAGATTTCCCCCCAGAAAACAGATTTACAAAGAGAGATAAATTTGGAGATATCTCCAAAATTAAAGGTTTTTTTTCTTTAATTCTATAATTTTTTTGGTTTTTGTTTTCAATTTTTCTGGGTGTACTTTATTGTTTTCTAATGGGGTGATTTTTTTCGTTTTTGTGGATTTGTGTATAGATTCTTTTGATCATTTGGGGTTTTATAGATACTTGTAATCATGTATTTATAAATGGGTTGAAGTTAATCACTTCTTAATCATGTTTTAGGATTTTGCTAATGACTGATTTTCTTCAGTTTTTGTCTTCAATTGCTGCTGAACTTGGTCTTCGTGGGTGTAAAGCAAGTTTTTTAACTGCTTTTTTGGGGTTTTTTTTTTTGGTGATAAAATTGTTTTTTGGGGTTAATATTACT ATTAATTACGCCCCTACCATTACCAGCTGTTAGTTTTTCATTAACAAATGATCCAGGTGTCCCCCTTCCCTGTCTTCGTCCTCCTGCGTCCTTCTACTTCCCCCCTCTGCAATGGCGTTCTTCACCTTTCTCGGTTTTTCCTCTCCATCTTCCATTGTCTTCGTACAGCTCCACTATCTTCTCTCTCCTTTGCCTATTTCCTCCTCTATCTTCTCTCTCCTTTGCCTATTTCCTAGCAATACTATGGATTAACAGCAAACCCTAAATCCCAAAGTGGTGAGAGAAAGCTTCAAAAGCTTCGTCAATGGCTTCCACAACAAGCATAGCTCTTTTCCTCTCTCTCAAACCCTTTCAACTTCCTTACCAACACCAAAACCACCTCCATTTTCTACCTCCTCCTCTTCCATCTCCCCGCTCTTTTCACTCTGCAGCCTCCATTTCTTACCGTCGAATCGCATCATTGGATGCCTCGTATCCGGCGTCGGAGGTGGTGGACTTTCCGATACACGGAAATTGGAATTTTCTAGAGAGTTTGCCGTTATCGCCACCATGTTGAAACGCATCGAACCTCTTGATACATTTGATATTTCCAAAGGTGTTTCTGATTCTGCCAAGGATTCTATGAAATAGACGATTTCTACAATGCTCGGACTTTTGCCGTCTGATCAGTTCTCTGTTTCTGTTAGGGTTTCGAAGGTTCCTTTTCATCACCTCCTCGCCTCTTCCATCATAACTGGGGCTCCTGAGCTTCTTCTTGGAGCTAAAGAGTACTCAACAGCGGTGGATATGTGGTCAGTGGTTTGCATAATGGCGGAACTGCTAACCAATAAACCATTGTTTGATGAAAATATTGAGGTTGAGCAGATTGGCAAGGCAGGCCTTTGTCTCTTCTGATATTCAGAACACTGGGCACACCTACTGACAAGATTTGGCCGAAATATTCTCAATTGCCTGGGGTTAAGGCTAACTTTGTACACAAATCGTCTAATCAATTGCATAAGAAGTTCCCTCGTGCATCTATTACAGGCTCTCCTGTACTTTCTGACTCAGGGCTTGACTTGCCGAGCCGGCTATTGACATATTGTGTGTTTCCTGTGGGAAATGTCTCCGTAAGAGATTTGATTAAAGGTATTCCTTGGTTGTCAGATTTTTTTTGGATGTTCTTGATATCTGTTCATCATCTATTTATTGCTCTCTTCTAAATTTGATTGTATACTCTTCAGTTTGAAATGAATAATAAGATACGAAGAATTTCTTAGACTATTATTAGCTAAACGCTGAACCGAATGTCTGTTTATTTTTGCCTTATTTGAAAAATCTGTAAATAAAGGGCCTTTAATTTGACCGACCATAGACCTTAACTCTTTGTATACGTTGTATTTTACTAGATGGTCATATGACATTATGCACAAGGATTCATAAACTTTTGTTTGTTTGAAATCTATTTGTCACTTCTTTTATGCCCCCTTTTGTTTGGCCTTCGTTTACTTTGCTTATTGTTGGCTCGTTTTATACAGTAAAAGCCCCAAGATTTCCCCCCAGAAAACAGATTTACAAAGAGAGATAAATTTGGAGATATCTCCAAAATTAAAGGTTTTTTTTCTTTAATTCTATAATTTTTTTGGTTTTTGTTTTCAATTTTTCTGGGTGTACTTTATTGTTTTCTAATGGGGTGATTTTTTTCGTTTTTGTGGATTTGTGTATAGATTCTTTTGATCATTTGGGGTTTTATAGATACTTGTAATCATGTATTTATAAATGGGTTGAAGTTAATCACTTCTTAATCATGTTTTAGGATTTTGCTAATGACTGATTTTCTTCAGTTTTTGTCTTCAATTGCTGCTGAACTTGGTCTTCGTGGGTGTAAAGCAAGTTTTTTAACTGCTTTTTTGGGGTTTTTTTTTTTGGTGATAAAATTGTTTTTTGGGGTTAATATTACT ATGCTCGGACTTTTGCCGTCTGATCAGTTCTCTGTTTCTGTTAGGGTTTCGAAGGTTCCTTTTCATCACCTCCTCGCCTCTTCCATCATAACTGGGGCTCCTGAGCTTCTTCTTGGAGCTAAAGAGTACTCAACAGCGGTGGATATGTGGTCAGTGGTTTGCATAATGGCGGAACTGCTAACCAATAAACCATTGTTTGATGAAAATATTGAGGTTGAGCAGATTGGCAAGGCAGGCCTTTGTCTCTTCTGA MLGLLPSDQFSVSVRVSKVPFHHLLASSIITGAPELLLGAKEYSTAVDMWSVVCIMAELLTNKPLFDENIEVEQIGKAGLCLF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07376.1 vs. NCBI nr
Match: gi|902169125|gb|KNA07614.1| (hypothetical protein SOVF_170220 isoform B, partial [Spinacia oleracea]) HSP 1 Score: 83.2 bits (204), Expect = 2.400e-13 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 1
BLAST of Spo07376.1 vs. NCBI nr
Match: gi|902132268|gb|KNA04311.1| (hypothetical protein SOVF_200870 [Spinacia oleracea]) HSP 1 Score: 80.5 bits (197), Expect = 1.500e-12 Identity = 39/45 (86.67%), Postives = 40/45 (88.89%), Query Frame = 1
BLAST of Spo07376.1 vs. NCBI nr
Match: gi|731327056|ref|XP_010674333.1| (PREDICTED: cyclin-dependent kinase G-2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 80.1 bits (196), Expect = 2.000e-12 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1
BLAST of Spo07376.1 vs. NCBI nr
Match: gi|870859846|gb|KMT11234.1| (hypothetical protein BVRB_5g110640 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 75.1 bits (183), Expect = 6.500e-11 Identity = 36/45 (80.00%), Postives = 38/45 (84.44%), Query Frame = 1
BLAST of Spo07376.1 vs. NCBI nr
Match: gi|731333816|ref|XP_010677923.1| (PREDICTED: cyclin-dependent kinase G-2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 75.1 bits (183), Expect = 6.500e-11 Identity = 36/45 (80.00%), Postives = 38/45 (84.44%), Query Frame = 1
BLAST of Spo07376.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QK59_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_170220 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.700e-13 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 1
BLAST of Spo07376.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCQ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_200870 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.100e-12 Identity = 39/45 (86.67%), Postives = 40/45 (88.89%), Query Frame = 1
BLAST of Spo07376.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FDQ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g078040 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.400e-12 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1
BLAST of Spo07376.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CGJ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110640 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.500e-11 Identity = 36/45 (80.00%), Postives = 38/45 (84.44%), Query Frame = 1
BLAST of Spo07376.1 vs. UniProtKB/TrEMBL
Match: Q5QPR3_HUMAN (Cyclin-dependent kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.000e-10 Identity = 35/45 (77.78%), Postives = 37/45 (82.22%), Query Frame = 1
BLAST of Spo07376.1 vs. ExPASy Swiss-Prot
Match: CD11A_HUMAN (Cyclin-dependent kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=4) HSP 1 Score: 73.9 bits (180), Expect = 9.000e-13 Identity = 35/45 (77.78%), Postives = 37/45 (82.22%), Query Frame = 1
BLAST of Spo07376.1 vs. ExPASy Swiss-Prot
Match: CD11B_HUMAN (Cyclin-dependent kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3) HSP 1 Score: 71.6 bits (174), Expect = 4.500e-12 Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 1
BLAST of Spo07376.1 vs. ExPASy Swiss-Prot
Match: CD11B_MOUSE (Cyclin-dependent kinase 11B OS=Mus musculus GN=Cdk11b PE=1 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 1.000e-11 Identity = 33/45 (73.33%), Postives = 36/45 (80.00%), Query Frame = 1
BLAST of Spo07376.1 vs. ExPASy Swiss-Prot
Match: CDKG1_ARATH (Cyclin-dependent kinase G1 OS=Arabidopsis thaliana GN=CDKG1 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.700e-11 Identity = 33/44 (75.00%), Postives = 37/44 (84.09%), Query Frame = 1
BLAST of Spo07376.1 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSJ (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 2.200e-11 Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 1
BLAST of Spo07376.1 vs. TAIR (Arabidopsis)
Match: AT5G63370.1 (Protein kinase superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 9.600e-13 Identity = 33/44 (75.00%), Postives = 37/44 (84.09%), Query Frame = 1
BLAST of Spo07376.1 vs. TAIR (Arabidopsis)
Match: AT1G67580.1 (Protein kinase superfamily protein) HSP 1 Score: 67.8 bits (164), Expect = 3.600e-12 Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 1
BLAST of Spo07376.1 vs. TAIR (Arabidopsis)
Match: AT1G76540.1 (cyclin-dependent kinase B2;1) HSP 1 Score: 60.5 bits (145), Expect = 5.800e-10 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 1
BLAST of Spo07376.1 vs. TAIR (Arabidopsis)
Match: AT3G48750.1 (cell division control 2) HSP 1 Score: 58.9 bits (141), Expect = 1.700e-9 Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 1
BLAST of Spo07376.1 vs. TAIR (Arabidopsis)
Match: AT1G18040.1 (cyclin-dependent kinase D1;3) HSP 1 Score: 58.9 bits (141), Expect = 1.700e-9 Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07376.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07376.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07376.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07376.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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