Spo07408 (gene) | SpinachBase

Overview


Name	Spo07408
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family
Location	SpoScf_01060 : 14348 .. 14910 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAATGTGAGTATATTCTTCAATTAATAATAATTAAGTCACCTTCATCTATTCTTCAATTTCTATGAGTCACCCTAATCTATTCATAATCTTATTATATATCTTTCTATGATTTCTAATTCTTTTGAGCCAATTATTGTTTATAACAGGAAAAATAAGATGAGGAAGCTACAATTAATGTTAAGGAAATGCAAGAGTTTATCAAGGCAATTGAAATTGAAAAGATCAACTTCCTACACCAGTCTTAGATCCAACAACTCAACTAAGGAAGAAGAATACGAGACTATCTTTGTAGGGAGTTCAAGAAGGCGTTACGTGATCGATTCCAAGTACTTGAGTCATCCTTTGTTTAATGCTCTTCTTCAGAAATCCAACCAAACTCCAATAACAGACCACCAACATTCTTGTAGTAATAGTATCTCTATTACTATTATGTGTGAAGTTGTACTCTTTGATCACCTTCTTTGGATGCTTGATAATGGTGATCCTAATCTCGACAACGACGACGCTTTTGAGTCCTTGGATCAACTTGCTGATCTCTATCTTCACTCATCATAA

mRNA sequence

ATGGCTCCAATGAAAAATAAGATGAGGAAGCTACAATTAATGTTAAGGAAATGCAAGAGTTTATCAAGGCAATTGAAATTGAAAAGATCAACTTCCTACACCAGTCTTAGATCCAACAACTCAACTAAGGAAGAAGAATACGAGACTATCTTTGTAGGGAGTTCAAGAAGGCGTTACGTGATCGATTCCAAGTACTTGAGTCATCCTTTGTTTAATGCTCTTCTTCAGAAATCCAACCAAACTCCAATAACAGACCACCAACATTCTTGTAGTAATAGTATCTCTATTACTATTATGTGTGAAGTTGTACTCTTTGATCACCTTCTTTGGATGCTTGATAATGGTGATCCTAATCTCGACAACGACGACGCTTTTGAGTCCTTGGATCAACTTGCTGATCTCTATCTTCACTCATCATAA

Coding sequence (CDS)

ATGGCTCCAATGAAAAATAAGATGAGGAAGCTACAATTAATGTTAAGGAAATGCAAGAGTTTATCAAGGCAATTGAAATTGAAAAGATCAACTTCCTACACCAGTCTTAGATCCAACAACTCAACTAAGGAAGAAGAATACGAGACTATCTTTGTAGGGAGTTCAAGAAGGCGTTACGTGATCGATTCCAAGTACTTGAGTCATCCTTTGTTTAATGCTCTTCTTCAGAAATCCAACCAAACTCCAATAACAGACCACCAACATTCTTGTAGTAATAGTATCTCTATTACTATTATGTGTGAAGTTGTACTCTTTGATCACCTTCTTTGGATGCTTGATAATGGTGATCCTAATCTCGACAACGACGACGCTTTTGAGTCCTTGGATCAACTTGCTGATCTCTATCTTCACTCATCATAA

Protein sequence

MAPMKNKMRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKEEEYETIFVGSSRRRYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGDPNLDNDDAFESLDQLADLYLHSS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo07408.1	Spo07408.1	mRNA

Homology

[Close]

BLAST of Spo07408.1 vs. NCBI nr
Match: gi|566195513|ref|XP_002317621.2| (auxin-responsive family protein [Populus trichocarpa])

HSP 1 Score: 129.4 bits (324), Expect = 4.800e-27
Identity = 75/138 (54.35%), Postives = 98/138 (71.01%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKE---------EEYETIFVGSSRRR 67
           M+K+ L+LRKCKSLSRQL   RS+SY+SLRS ++ ++         E +ETIFVGS+R+R
Sbjct: 1   MKKINLILRKCKSLSRQLG--RSSSYSSLRSKSTREDLWGDHKQEDENHETIFVGSTRKR 60

Query: 68  YVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGDPN 127
           YVI SKYLSHPL NAL++KS Q P  D+         + + CEVV FDHLLWML+N DPN
Sbjct: 61  YVISSKYLSHPLVNALIEKSRQKPGEDN--------ILVVKCEVVFFDHLLWMLENADPN 120

Query: 128 LDNDDAFESLDQLADLYL 137
                +F+SL++LADLY+
Sbjct: 121 A----SFDSLEELADLYM 124

[Close]

BLAST of Spo07408.1 vs. NCBI nr
Match: gi|731434300|ref|XP_010645004.1| (PREDICTED: uncharacterized protein LOC100256141 [Vitis vinifera])

HSP 1 Score: 124.8 bits (312), Expect = 1.200e-25
Identity = 75/136 (55.15%), Postives = 94/136 (69.12%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTK--------EEEYETIFVGSSRRRY 67
           M+K+ L+LRKCKSLSRQL   RS+SY+SLRS ++ +        EE  E I VGSS+RRY
Sbjct: 1   MKKINLILRKCKSLSRQLG--RSSSYSSLRSKSTRENVWGDMHEEEHREAILVGSSKRRY 60

Query: 68  VIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGDPNL 127
           +I SKYL+HPL NAL+ KS Q P            ++ + CEVVLFDHLLWMLDNGDPNL
Sbjct: 61  MISSKYLNHPLLNALIDKSKQRP----------GEALLVKCEVVLFDHLLWMLDNGDPNL 120

Query: 128 DNDDAFESLDQLADLY 136
            +    ESL++LA+LY
Sbjct: 121 SS----ESLEELAELY 120

[Close]

BLAST of Spo07408.1 vs. NCBI nr
Match: gi|255544710|ref|XP_002513416.1| (PREDICTED: uncharacterized protein LOC8272635 [Ricinus communis])

HSP 1 Score: 124.0 bits (310), Expect = 2.000e-25
Identity = 74/139 (53.24%), Postives = 95/139 (68.35%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKE----------EEYETIFVGSSRR 67
           M+K+ L+LRKCKSLSRQL   RS+SY+SLRS ++ +E          E   T+FVGS+R+
Sbjct: 1   MKKINLILRKCKSLSRQLG--RSSSYSSLRSKSTREELWGDHKEEDEEHQSTLFVGSTRK 60

Query: 68  RYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGDP 127
           RYVI SKYLSHPL NAL+QKS Q               + + CEVVLFDHLLWML+N DP
Sbjct: 61  RYVISSKYLSHPLVNALIQKSKQR---------QGEEILVVKCEVVLFDHLLWMLENADP 120

Query: 128 NLDNDDAFESLDQLADLYL 137
           NL    +F+SL++LA+LY+
Sbjct: 121 NL----SFDSLEELAELYV 124

[Close]

BLAST of Spo07408.1 vs. NCBI nr
Match: gi|743887332|ref|XP_011038114.1| (PREDICTED: uncharacterized protein LOC105135098 [Populus euphratica])

HSP 1 Score: 122.9 bits (307), Expect = 4.500e-25
Identity = 73/140 (52.14%), Postives = 96/140 (68.57%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKE-----------EEYETIFVGSSR 67
           M+K+ L+LRKCKSLSRQL   RS+SY+SLRS ++ ++           E + TIFVGS+R
Sbjct: 1   MKKISLILRKCKSLSRQLG--RSSSYSSLRSKSTREDLWGGHDHKQEDENHATIFVGSTR 60

Query: 68  RRYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGD 127
           +RYVI SKYLSHPL NAL++KS Q P  D          + + CEVV FDHLLWML+N D
Sbjct: 61  KRYVISSKYLSHPLVNALIEKSKQNPGEDS--------ILVVRCEVVFFDHLLWMLENAD 120

Query: 128 PNLDNDDAFESLDQLADLYL 137
           P+++    F SL++LADLY+
Sbjct: 121 PSVN----FGSLEELADLYM 126

[Close]

BLAST of Spo07408.1 vs. NCBI nr
Match: gi|698519271|ref|XP_009804499.1| (PREDICTED: uncharacterized protein LOC104249720 [Nicotiana sylvestris])

HSP 1 Score: 122.9 bits (307), Expect = 4.500e-25
Identity = 73/140 (52.14%), Postives = 98/140 (70.00%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKE-----------EEYETIFVGSSR 67
           M+K+ L+LRKCK+LSRQL   RS+SY+SLRS ++ ++           E++ETI VGSSR
Sbjct: 1   MKKMNLLLRKCKTLSRQLG--RSSSYSSLRSKSTREDLIWNVESEDNKEDFETILVGSSR 60

Query: 68  RRYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGD 127
           RRYVI SKYLSHPL NAL++KS Q      +H+ +    +++ CEVVLFDHLLW+L+N D
Sbjct: 61  RRYVIKSKYLSHPLLNALIEKSKQ------KHAYAWEGHLSVKCEVVLFDHLLWLLENAD 120

Query: 128 PNLDNDDAFESLDQLADLYL 137
           P     D+FE   +LADLY+
Sbjct: 121 PTNFTSDSFE---ELADLYV 129

[Close]

BLAST of Spo07408.1 vs. UniProtKB/TrEMBL
Match: B9I0J2_POPTR (Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0011s14660g PE=4 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 3.400e-27
Identity = 75/138 (54.35%), Postives = 98/138 (71.01%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKE---------EEYETIFVGSSRRR 67
           M+K+ L+LRKCKSLSRQL   RS+SY+SLRS ++ ++         E +ETIFVGS+R+R
Sbjct: 1   MKKINLILRKCKSLSRQLG--RSSSYSSLRSKSTREDLWGDHKQEDENHETIFVGSTRKR 60

Query: 68  YVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGDPN 127
           YVI SKYLSHPL NAL++KS Q P  D+         + + CEVV FDHLLWML+N DPN
Sbjct: 61  YVISSKYLSHPLVNALIEKSRQKPGEDN--------ILVVKCEVVFFDHLLWMLENADPN 120

Query: 128 LDNDDAFESLDQLADLYL 137
                +F+SL++LADLY+
Sbjct: 121 A----SFDSLEELADLYM 124

[Close]

BLAST of Spo07408.1 vs. UniProtKB/TrEMBL
Match: B9RI47_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1576420 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.400e-25
Identity = 74/139 (53.24%), Postives = 95/139 (68.35%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKE----------EEYETIFVGSSRR 67
           M+K+ L+LRKCKSLSRQL   RS+SY+SLRS ++ +E          E   T+FVGS+R+
Sbjct: 1   MKKINLILRKCKSLSRQLG--RSSSYSSLRSKSTREELWGDHKEEDEEHQSTLFVGSTRK 60

Query: 68  RYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGDP 127
           RYVI SKYLSHPL NAL+QKS Q               + + CEVVLFDHLLWML+N DP
Sbjct: 61  RYVISSKYLSHPLVNALIQKSKQR---------QGEEILVVKCEVVLFDHLLWMLENADP 120

Query: 128 NLDNDDAFESLDQLADLYL 137
           NL    +F+SL++LA+LY+
Sbjct: 121 NL----SFDSLEELAELYV 124

[Close]

BLAST of Spo07408.1 vs. UniProtKB/TrEMBL
Match: B9GK00_POPTR (Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0001s46220g PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.100e-25
Identity = 73/140 (52.14%), Postives = 96/140 (68.57%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKE-----------EEYETIFVGSSR 67
           M+K+ L+LRKCKSLSRQL   RS+SY+SLRS ++ ++           E + TIFVGS+R
Sbjct: 1   MKKISLILRKCKSLSRQLG--RSSSYSSLRSKSTREDLWGHHDHKQEDENHATIFVGSTR 60

Query: 68  RRYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGD 127
           +RYVI SKYLSHPL NAL++KS Q P  D          + + CEVV FDHLLWML+N D
Sbjct: 61  KRYVISSKYLSHPLVNALIEKSKQKPGEDS--------ILVVRCEVVFFDHLLWMLENAD 120

Query: 128 PNLDNDDAFESLDQLADLYL 137
           P+++    F SL++LADLY+
Sbjct: 121 PSVN----FGSLEELADLYM 126

[Close]

BLAST of Spo07408.1 vs. UniProtKB/TrEMBL
Match: A0A067DWD4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041846mg PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.000e-25
Identity = 75/141 (53.19%), Postives = 93/141 (65.96%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKE-------------EEYETIFVGS 67
           M+K+ L+LRKCKSLSRQL   RS+SY+SLRS ++  E             E Y TIFVGS
Sbjct: 1   MKKITLLLRKCKSLSRQLG--RSSSYSSLRSKSTRDEIWGDQQIMKHAGDENYATIFVGS 60

Query: 68  SRRRYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDN 127
           +R+RYVI+SKYL+HPL NAL++KS Q               I + CEVVLFDHLLWML+N
Sbjct: 61  TRKRYVINSKYLNHPLLNALIEKSKQK---------HGGEFILVKCEVVLFDHLLWMLEN 120

Query: 128 GDPNLDNDDAFESLDQLADLY 136
            DPNL      +SL++LADLY
Sbjct: 121 ADPNL----ILDSLEELADLY 126

[Close]

BLAST of Spo07408.1 vs. UniProtKB/TrEMBL
Match: V4TRE9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023709mg PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.200e-25
Identity = 75/141 (53.19%), Postives = 92/141 (65.25%), Query Frame = 1


		  
Query: 8   MRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKE-------------EEYETIFVGS 67
           M+K+ L+LRKCKSLSRQL   RS+SY+SLRS ++  E             E Y TIFVGS
Sbjct: 1   MKKINLLLRKCKSLSRQLG--RSSSYSSLRSKSTRDEIWGDQQIMKHAGDENYATIFVGS 60

Query: 68  SRRRYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDN 127
            R+RYVI+SKYL+HPL NAL++KS Q               I + CEVVLFDHLLWML+N
Sbjct: 61  RRKRYVINSKYLNHPLLNALIEKSKQK---------HGGEFILVKCEVVLFDHLLWMLEN 120

Query: 128 GDPNLDNDDAFESLDQLADLY 136
            DPNL      +SL++LADLY
Sbjct: 121 ADPNL----ILDSLEELADLY 126

[Close]

BLAST of Spo07408.1 vs. TAIR (Arabidopsis)
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 96.3 bits (238), Expect = 1.600e-20
Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 1


		  
Query: 7   KMRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKEEE--------------YETIFV 66
           K  +L +MLR+CKS+S QL   RS SYTSLRS ++ ++ +              Y+T+ V
Sbjct: 3   KKMRLMMMLRRCKSVSTQLG--RSYSYTSLRSKSARRDPQDHLQDVDQSPTPSMYQTVLV 62

Query: 67  GSSRRRYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWML 126
           G +++ Y+I  K+L HPL NAL++K  +    D++     S  IT+ CEVVLFDHLLWML
Sbjct: 63  GRTKKPYLISKKHLKHPLLNALVEKQQRYEEDDNE---DGSCIITVKCEVVLFDHLLWML 122

Query: 127 DNGDPNLDNDDAFESLDQLADLYL 137
           + G    D     ESLD  A LYL
Sbjct: 123 EYG----DEVHILESLDDFAHLYL 137

[Close]

BLAST of Spo07408.1 vs. TAIR (Arabidopsis)
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 4.700e-12
Identity = 44/133 (33.08%), Postives = 80/133 (60.15%), Query Frame = 1


		  
Query: 7   KMRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKEEEYETIFVGSSRRRYVIDSKYL 66
           K+ KL+  ++K  SL++       T+ T++  +  +K E+   ++VG SRR Y++ S  +
Sbjct: 6   KLTKLKSAIKKWPSLTKNHHSTMCTASTAV--SEVSKCEDLHVVYVGKSRRPYMLSSHVI 65

Query: 67  SHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGDPNLDNDDAFE 126
           +HPLF  LL +S++    + +H   +  ++ + CEVVLF+HLLWML N   +  ++D  E
Sbjct: 66  AHPLFQELLDRSSR--FIEERH---DQETVLVACEVVLFEHLLWMLKNSSSDHGDEDDRE 125

Query: 127 --SLDQLADLYLH 138
             S+++LA+ Y +
Sbjct: 126 RGSVEELAEFYTY 131

[Close]

BLAST of Spo07408.1 vs. TAIR (Arabidopsis)
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 62.4 bits (150), Expect = 2.600e-10
Identity = 45/136 (33.09%), Postives = 74/136 (54.41%), Query Frame = 1


		  
Query: 1   MAPMKNKMRKLQLMLRKCKSLS-RQLKLKRSTSYTSLRSNNSTKEEEYETIFVGSSRRRY 60
           MA   NK+ KL+ +L+K  S + +  +    T+++   + ++   E+ +T++VG +RR Y
Sbjct: 1   MAKGGNKLMKLKSVLKKLNSFNTKPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRRTY 60

Query: 61  VIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGDPNL 120
            + S  +SHPLF  L          D         SI++ CEVVLF+HLLWML+N D   
Sbjct: 61  HVSSDVVSHPLFQQLAAVDGGCGSEDG--------SISVSCEVVLFEHLLWMLENADA-- 120

Query: 121 DNDDAFESLDQLADLY 136
            ++   ES+ +L + Y
Sbjct: 121 -DESRPESVYELVEFY 125

[Close]

BLAST of Spo07408.1 vs. TAIR (Arabidopsis)
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 57.8 bits (138), Expect = 6.300e-9
Identity = 40/131 (30.53%), Postives = 70/131 (53.44%), Query Frame = 1


		  
Query: 7   KMRKLQLMLRKCKSLSRQLKLKRSTSYTSLRSNNSTKEEEYETIFVGSSRRRYVIDSKYL 66
           K+ KL+  ++K  S ++      STS  ++ S+  +++     ++VG +RR Y++    +
Sbjct: 6   KLTKLKSAMKKWPSFAKNHH--HSTSSAAV-SDELSEDNNLHVVYVGQTRRPYMLRPDII 65

Query: 67  SHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLLWMLDNGDPNLDNDDAFE 126
           SHPLF  L+ +S+   I   +        I + CEVVLF+HLLWML +G           
Sbjct: 66  SHPLFQELVDRSSSRSIEQDR-------EIVVACEVVLFEHLLWMLKSGQEG-------G 119

Query: 127 SLDQLADLYLH 138
           S+++LA+ Y +
Sbjct: 126 SVEELAEFYTY 119

[Close]

BLAST of Spo07408.1 vs. TAIR (Arabidopsis)
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 50.1 bits (118), Expect = 1.300e-6
Identity = 27/74 (36.49%), Postives = 42/74 (56.76%), Query Frame = 1


		  
Query: 50  IFVGSSRRRYVIDSKYLSHPLFNALLQKSNQTPITDHQHSCSNSISITIMCEVVLFDHLL 109
           ++VG   RR++I + YLSH LF  LL+K+      + +     S ++TI CEV  F +LL
Sbjct: 86  VYVGPELRRFIIPTSYLSHSLFKVLLEKA------EEEFGFDQSGALTIPCEVETFKYLL 145

Query: 110 WMLDNGDPNLDNDD 124
             ++N   +L  DD
Sbjct: 146 KCMENNLKDLHPDD 153

The following BLAST results are available for this feature:

BLAST of Spo07408.1 vs. NCBI nr
BLAST of Spo07408.1 vs. UniProtKB/TrEMBL
BLAST of Spo07408.1 vs. ExPASy Swiss-Prot
BLAST of Spo07408.1 vs. TAIR (Arabidopsis)

BLAST of Spo07408.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|566195513\|ref\|XP_002317621.2\|	4.8e-27	54.3	auxin-responsive family protei...	[more]
gi\|731434300\|ref\|XP_010645004.1\|	1.2e-25	55.1	PREDICTED: uncharacterized pro...	[more]
gi\|255544710\|ref\|XP_002513416.1\|	2.0e-25	53.2	PREDICTED: uncharacterized pro...	[more]
gi\|743887332\|ref\|XP_011038114.1\|	4.5e-25	52.1	PREDICTED: uncharacterized pro...	[more]
gi\|698519271\|ref\|XP_009804499.1\|	4.5e-25	52.1	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo07408.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
B9I0J2_POPTR	3.4e-27	54.3	Auxin-responsive family protei...	[more]
B9RI47_RICCO	1.4e-25	53.2	Putative uncharacterized prote...	[more]
B9GK00_POPTR	4.1e-25	52.1	Auxin-responsive family protei...	[more]
A0A067DWD4_CITSI	7.0e-25	53.1	Uncharacterized protein OS=Cit...	[more]
V4TRE9_9ROSI	9.2e-25	53.1	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo07408.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo07408.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G12955.1	1.6e-20	43.0	SAUR-like auxin-responsive pro...	[more]
AT1G17345.1	4.7e-12	33.0	SAUR-like auxin-responsive pro...	[more]
AT5G20820.1	2.6e-10	33.0	SAUR-like auxin-responsive pro...	[more]
AT1G72430.1	6.3e-9	30.5	SAUR-like auxin-responsive pro...	[more]
AT5G20810.2	1.3e-6	36.4	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 17..112 score: 2.2
None	No IPR available	unknown	Coil	Coil	coord: 4..24 scor
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 1..136 score: 1.1
None	No IPR available	PANTHER	PTHR31374:SF46	SUBFAMILY NOT NAMED	coord: 1..136 score: 1.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo13583	0.74	Barchart \| Table
Spo01514	0.68	Barchart \| Table
Spo12965	0.66	Barchart \| Table
Spo21155	0.66	Barchart \| Table