Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAACGTAAGAAATAACCAGTCAGCAGAAAATAACAGCACAACGGAAAAATCGATTAAACTATTAACACGTTCGTCCAGAATTTTCGCACTCCTCCTCTATAAATACCCCTATCCTGCCGCCTTCCCAGAAATCCCAATTTCTCTCTTCACCCATTTACACACCTAGCTATAAACACCAAGAAGAAGGGATTTCCATTATTCCTTTGCCATTTCCAATCTGACAACCCCTTCCGCCGCTTTCGTCACCCACATCTTCGCCGCCATGGATCGCCGCCTTGCCGTCTTTTTTTCTCTCCTCGCCATTTCTCTCCACCTTCTACCACTTCCAGGTACTATGATCTCAACTCATATACTTCTGTACTCTGTTTATAAGATATTCAGATTCAATAGAAATAATTAAAATTATATTCTCAGATGATTTTTGTGCGGAATTTTGCAGGAGATGCATCGACATTTACTATAACAAACAACTGCGACTACACTGTATGGCCAGGAATCCTCTCCAACGCCGGCGTAGCACCGCTCTCCACCACCGGTTTCTCTCTTCAAAAAGGCGAATCGAAACCCATTGCTCTGCCATCCGGTTGGGGGGGCCGCTTCTGGGGCCGAACCCTCTGTTCAACGGATAAAAAAACCGGGCAATTCACTTGTCTCACCGGTGACTGTGGGTCCGGAAAAATCGAATGTTCTGGTGCTGGAGCATTACCACCGGCGACATTGGCAGAGTTCACGCTTGATGGCTCCGGCGGGATGGATTTCTACGATGTGAGCCTCGTGGATGGATACAATGTCGCCATGTTGGTTGCGCCGCGAGGTGGTAGTGGGCCAAATTGTACTTTTACTGGGTGCGTCAATGATTTGAACGGCGCGTGTCCATCAGAGTTGAGGGTGATGAGCGAGGGAGAAGAGAGTGCAGTGGCGTGTAAAAGCGCGTGTGGTAAATTCAACAGTCCGCAGTATTGTTGTAGTGGAACGTACGGATCGCCAGACACGTGTAAGCCGTCGAGTTACTCTTTGGCGTTTAAGAAGGCTTGCCCACGCGCATATAGCTACGCCTATGATGATAAGAGTAGTACTTTCACTTGTAAAGGGTCTCCTGATTATACCATCACCTTCTGCCCTTCGCCTACTACCAGGTAACTAAATTCTTCCTTGTTTAATCAATTTATTACCAATTATATAACTTTCACCTAAATGATTTGTGATTGTAGAATTAACCAAGATCGAAAAATCAACGTCTTTTGGTGTTATGTTACGCTTGTAATTAAACTTTTCGTGTTTGTTTTTATTCATATTTATCACGTTTTACCAGAAACACAAAGGGGGATAATTGCTGAAGTAGTTGTTTCCATATTTTATTTTAATGATAAAACCACTGAATTAATATACAAGTATTTGGTTAATGTCAAATTTGGTGCCTGTCAATAAAAGAATTAGTGTGGGAATTTAGTTAAAGATGAGTGAATATCAATTTATGTAGTTAGTGAATAAATGGGCCACTCCTAATTTGCTTCAACTTTACTCTAAGTCGTTGGGTGTTATAATGGAATACCAACCCAGATTCTTGCTTCCAAAATTTGAAGATAACATTGTCATTTCAGTCATACAGAGTTTTTCTTATGCGCAAAACTTTATACTCCAAATCTTTTGTTATTTCGGTAGTAAGCCAACTTTAACACTTCCACAGGAGGAAGTCTTAATCTATTCTGGGTATACCATTGAAATGGTATACTAATATTCTGCATTTTTATTTAGTACCAAAACACATAGTTTAGTATAAAAAAAATAATTGTATTTTCTCATGTAATACCAAACAACATAGTTTGGTAACATGGTTTCATTTTTATTTGGTTCCAAACAACATAGTTTGGTACTCACAAGTCAAATATAAATGTTATTTATCGTGGGGCCAGACTCAATTTATTACATGAACTTACCATTTAGCCCTTAATATACCAACTGAAGTTACTATTTTACCCTTAGTATACCATTTTAATGGTATACCTAGTATAGATTCAGAAAACCTCTTTCCACAGTTCCACCTTAATAATAGTTCGAGATTTTCCTTCCGCTATTGTGATAGGAGTTTTCCCTGACCAATAATTGCACTCTATTCTGACAATTCGAACGTTGCTTCGCAAGTAAATTCTCTTCTCACTAGGAACAAATGTAAATTAAGCCCGTTAGAAAAATGATTGAAGGTGAAATTCCACATGTGCCCACATTTAGTAAAAATATCATGAGATATTTGTATGGGCATAAGTGTCTTTTCCGGGTGAGGTGTTCAGTGTTCTATGTTAAAGTCGGTTTTACACAAAGATACAAATCGCACATCCCCAGGCCCCAGGCCCCAGCCTCTCTTTTCACCCTTGGATCATGCACTTTAACGGTCCATTAATCAGGACTAAGATATTTAATGATGGAAATGGCATCTGCCAGTTTAGTAAAAACAATAGTTCACCGATTGAAAGTTGCATTTTATGCTACAATTATTGTAGCTAATTTGACGTGCTGTCATGTGTAAAAATAATTGCGACAAATGGTTAGTTAGGTTGGAATATCTTGGCCTTAAATTGGTTCGTGCGCAATATATCTGTGTCACATCGATTATGTTCGTGTTAATTTCAGGGTACCAAATAGTAACATATGCTAAGCTTTTATTGGTTGTTGTCACGTAAGCAATTTCACATGGGATTAAAATTTAAATCATTTGAAATTTAGACCACTTACAGTCAAGGGTATGAAACTATTTCATACCCTGAGGGTACAAGTACAAGTAGTCTTTTGGTGTCAATTCTAATACCGTGCCATGTACGTGTTAATTTTTTCAAATTTAACCATGCATTAAATGTGGTTACAGTGTGTTGTATTGACTATTGATCATTTTCCGTATTTTGTTCGCCTAACTACTAGTATAGATTATTCACTTATTCTTTATTGGGGTTGTAACGTCTGAGCTGTTATGTTTTATGTGAATGGCGACAGCCAGAAGGCATCAGACGAAGAAGGAACACCATCAACATCATCTCCGTCATCAAATGTAATAATGAACAGCTCAATGGTATATGAAGGTGCTTTAGATATGTCATCGTCACCGTCCACGTACAATCATGTGTTATGTTCACCGCTTATTGCCGGTGGGGTTGCCACTATCATAGCCATCTGGCGGTTGTCACAACTCTTCTAATTCACACATTTTGGTTTGGTGAAGGAAGGTGGACGTTATTGTCACACCAAGTTGATGGATTACACAAAAGTCAGAACTAACTCTTAACTTATTACTTCTACTGGACTACTTGTACTATCATTCTTCTCCATCCATCACGAGTGAGACCTCGATCTTGGAATTTTCCCGCTTTGTAACGGGCCGGTGAAGGGCCTCGTTTCTGGGCCCGATGGTGAAGATGAACTAATTGAGTTTGAGATTGAGATTGAGATTGAGATTGAGGTTGAAGATTCCTTTTAGTGGTGAATTTTTTTAATTAAATTTGGAGGTAATTAGAGTTTCATAGAGGGTAGAAATTAGAAGGAATTAGCGATTGTAATTTATGTATACATGCTACTACTATTTAAAATTGCTACCACTGAGGTTGGTGTTTAGTTTTATTTGATTTACTCAAGTTTTGTTCCTTTTATCTCATGTGAATGTGTCATGAATTTTGCTTTCTTGCATATGATAATCAAATGAGCTTATCCATATTATGGTGGAAGATGATCTTGATTTCATTAATCAAAAGTTAATGATGTTAATTTGGATAATATTAATTTAATTGCAAGAAAAGGGATGGGTTGATGATTGTTGGTGAGGTATGCCTTCTCTTCAAAGGTAGTGCTAGCTAAAG GCAACGTAAGAAATAACCAGTCAGCAGAAAATAACAGCACAACGGAAAAATCGATTAAACTATTAACACGTTCGTCCAGAATTTTCGCACTCCTCCTCTATAAATACCCCTATCCTGCCGCCTTCCCAGAAATCCCAATTTCTCTCTTCACCCATTTACACACCTAGCTATAAACACCAAGAAGAAGGGATTTCCATTATTCCTTTGCCATTTCCAATCTGACAACCCCTTCCGCCGCTTTCGTCACCCACATCTTCGCCGCCATGGATCGCCGCCTTGCCGTCTTTTTTTCTCTCCTCGCCATTTCTCTCCACCTTCTACCACTTCCAGGAGATGCATCGACATTTACTATAACAAACAACTGCGACTACACTGTATGGCCAGGAATCCTCTCCAACGCCGGCGTAGCACCGCTCTCCACCACCGGTTTCTCTCTTCAAAAAGGCGAATCGAAACCCATTGCTCTGCCATCCGGTTGGGGGGGCCGCTTCTGGGGCCGAACCCTCTGTTCAACGGATAAAAAAACCGGGCAATTCACTTGTCTCACCGGTGACTGTGGGTCCGGAAAAATCGAATGTTCTGGTGCTGGAGCATTACCACCGGCGACATTGGCAGAGTTCACGCTTGATGGCTCCGGCGGGATGGATTTCTACGATGTGAGCCTCGTGGATGGATACAATGTCGCCATGTTGGTTGCGCCGCGAGGTGGTAGTGGGCCAAATTGTACTTTTACTGGGTGCGTCAATGATTTGAACGGCGCGTGTCCATCAGAGTTGAGGGTGATGAGCGAGGGAGAAGAGAGTGCAGTGGCGTGTAAAAGCGCGTGTGGTAAATTCAACAGTCCGCAGTATTGTTGTAGTGGAACGTACGGATCGCCAGACACGTGTAAGCCGTCGAGTTACTCTTTGGCGTTTAAGAAGGCTTGCCCACGCGCATATAGCTACGCCTATGATGATAAGAGTAGTACTTTCACTTGTAAAGGGTCTCCTGATTATACCATCACCTTCTGCCCTTCGCCTACTACCAGCCAGAAGGCATCAGACGAAGAAGGAACACCATCAACATCATCTCCGTCATCAAATGTAATAATGAACAGCTCAATGGTATATGAAGGTGCTTTAGATATGTCATCGTCACCGTCCACGTACAATCATGTGTTATGTTCACCGCTTATTGCCGGTGGGGTTGCCACTATCATAGCCATCTGGCGGTTGTCACAACTCTTCTAATTCACACATTTTGGTTTGGTGAAGGAAGGTGGACGTTATTGTCACACCAAGTTGATGGATTACACAAAAGTCAGAACTAACTCTTAACTTATTACTTCTACTGGACTACTTGTACTATCATTCTTCTCCATCCATCACGAGTGAGACCTCGATCTTGGAATTTTCCCGCTTTGTAACGGGCCGGTGAAGGGCCTCGTTTCTGGGCCCGATGGTGAAGATGAACTAATTGAGTTTGAGATTGAGATTGAGATTGAGATTGAGGTTGAAGATTCCTTTTAGTGGTGAATTTTTTTAATTAAATTTGGAGGTAATTAGAGTTTCATAGAGGGTAGAAATTAGAAGGAATTAGCGATTGTAATTTATGTATACATGCTACTACTATTTAAAATTGCTACCACTGAGGTTGGTGTTTAGTTTTATTTGATTTACTCAAGTTTTGTTCCTTTTATCTCATGTGAATGTGTCATGAATTTTGCTTTCTTGCATATGATAATCAAATGAGCTTATCCATATTATGGTGGAAGATGATCTTGATTTCATTAATCAAAAGTTAATGATGTTAATTTGGATAATATTAATTTAATTGCAAGAAAAGGGATGGGTTGATGATTGTTGGTGAGGTATGCCTTCTCTTCAAAGGTAGTGCTAGCTAAAG ATGGATCGCCGCCTTGCCGTCTTTTTTTCTCTCCTCGCCATTTCTCTCCACCTTCTACCACTTCCAGGAGATGCATCGACATTTACTATAACAAACAACTGCGACTACACTGTATGGCCAGGAATCCTCTCCAACGCCGGCGTAGCACCGCTCTCCACCACCGGTTTCTCTCTTCAAAAAGGCGAATCGAAACCCATTGCTCTGCCATCCGGTTGGGGGGGCCGCTTCTGGGGCCGAACCCTCTGTTCAACGGATAAAAAAACCGGGCAATTCACTTGTCTCACCGGTGACTGTGGGTCCGGAAAAATCGAATGTTCTGGTGCTGGAGCATTACCACCGGCGACATTGGCAGAGTTCACGCTTGATGGCTCCGGCGGGATGGATTTCTACGATGTGAGCCTCGTGGATGGATACAATGTCGCCATGTTGGTTGCGCCGCGAGGTGGTAGTGGGCCAAATTGTACTTTTACTGGGTGCGTCAATGATTTGAACGGCGCGTGTCCATCAGAGTTGAGGGTGATGAGCGAGGGAGAAGAGAGTGCAGTGGCGTGTAAAAGCGCGTGTGGTAAATTCAACAGTCCGCAGTATTGTTGTAGTGGAACGTACGGATCGCCAGACACGTGTAAGCCGTCGAGTTACTCTTTGGCGTTTAAGAAGGCTTGCCCACGCGCATATAGCTACGCCTATGATGATAAGAGTAGTACTTTCACTTGTAAAGGGTCTCCTGATTATACCATCACCTTCTGCCCTTCGCCTACTACCAGCCAGAAGGCATCAGACGAAGAAGGAACACCATCAACATCATCTCCGTCATCAAATGTAATAATGAACAGCTCAATGGTATATGAAGGTGCTTTAGATATGTCATCGTCACCGTCCACGTACAATCATGTGTTATGTTCACCGCTTATTGCCGGTGGGGTTGCCACTATCATAGCCATCTGGCGGTTGTCACAACTCTTCTAA MDRRLAVFFSLLAISLHLLPLPGDASTFTITNNCDYTVWPGILSNAGVAPLSTTGFSLQKGESKPIALPSGWGGRFWGRTLCSTDKKTGQFTCLTGDCGSGKIECSGAGALPPATLAEFTLDGSGGMDFYDVSLVDGYNVAMLVAPRGGSGPNCTFTGCVNDLNGACPSELRVMSEGEESAVACKSACGKFNSPQYCCSGTYGSPDTCKPSSYSLAFKKACPRAYSYAYDDKSSTFTCKGSPDYTITFCPSPTTSQKASDEEGTPSTSSPSSNVIMNSSMVYEGALDMSSSPSTYNHVLCSPLIAGGVATIIAIWRLSQLF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07451.1 vs. NCBI nr
Match: gi|902173249|gb|KNA08239.1| (hypothetical protein SOVF_164370 [Spinacia oleracea]) HSP 1 Score: 656.8 bits (1693), Expect = 2.000e-185 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1
BLAST of Spo07451.1 vs. NCBI nr
Match: gi|731360542|ref|XP_010691877.1| (PREDICTED: thaumatin-like protein 1b [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 531.2 bits (1367), Expect = 1.300e-147 Identity = 264/318 (83.02%), Postives = 286/318 (89.94%), Query Frame = 1
BLAST of Spo07451.1 vs. NCBI nr
Match: gi|1012187494|ref|XP_015969828.1| (PREDICTED: thaumatin-like protein 1 [Arachis duranensis]) HSP 1 Score: 424.5 bits (1090), Expect = 1.700e-115 Identity = 217/319 (68.03%), Postives = 250/319 (78.37%), Query Frame = 1
BLAST of Spo07451.1 vs. NCBI nr
Match: gi|571512227|ref|XP_006596544.1| (PREDICTED: thaumatin-like protein 1 [Glycine max]) HSP 1 Score: 422.9 bits (1086), Expect = 4.900e-115 Identity = 223/324 (68.83%), Postives = 251/324 (77.47%), Query Frame = 1
BLAST of Spo07451.1 vs. NCBI nr
Match: gi|502126365|ref|XP_004499280.1| (PREDICTED: thaumatin-like protein 1b [Cicer arietinum]) HSP 1 Score: 421.4 bits (1082), Expect = 1.400e-114 Identity = 214/320 (66.88%), Postives = 248/320 (77.50%), Query Frame = 1
BLAST of Spo07451.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLV9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164370 PE=4 SV=1) HSP 1 Score: 656.8 bits (1693), Expect = 1.400e-185 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1
BLAST of Spo07451.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJP1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016440 PE=4 SV=1) HSP 1 Score: 531.2 bits (1367), Expect = 8.900e-148 Identity = 264/318 (83.02%), Postives = 286/318 (89.94%), Query Frame = 1
BLAST of Spo07451.1 vs. UniProtKB/TrEMBL
Match: K7M8K8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G219600 PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 3.400e-115 Identity = 223/324 (68.83%), Postives = 251/324 (77.47%), Query Frame = 1
BLAST of Spo07451.1 vs. UniProtKB/TrEMBL
Match: V7CR37_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G005000g PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 6.400e-114 Identity = 211/309 (68.28%), Postives = 240/309 (77.67%), Query Frame = 1
BLAST of Spo07451.1 vs. UniProtKB/TrEMBL
Match: A0A0S3RQL1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G292800 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 5.400e-113 Identity = 212/312 (67.95%), Postives = 240/312 (76.92%), Query Frame = 1
BLAST of Spo07451.1 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 3.000e-72 Identity = 128/226 (56.64%), Postives = 158/226 (69.91%), Query Frame = 1
BLAST of Spo07451.1 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 2.800e-70 Identity = 130/242 (53.72%), Postives = 166/242 (68.60%), Query Frame = 1
BLAST of Spo07451.1 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 3.700e-70 Identity = 128/226 (56.64%), Postives = 154/226 (68.14%), Query Frame = 1
BLAST of Spo07451.1 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 2.000e-68 Identity = 128/241 (53.11%), Postives = 160/241 (66.39%), Query Frame = 1
BLAST of Spo07451.1 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.500e-66 Identity = 127/226 (56.19%), Postives = 155/226 (68.58%), Query Frame = 1
BLAST of Spo07451.1 vs. TAIR (Arabidopsis)
Match: AT1G20030.2 (Pathogenesis-related thaumatin superfamily protein) HSP 1 Score: 405.2 bits (1040), Expect = 3.700e-113 Identity = 203/277 (73.29%), Postives = 229/277 (82.67%), Query Frame = 1
BLAST of Spo07451.1 vs. TAIR (Arabidopsis)
Match: AT1G75800.1 (Pathogenesis-related thaumatin superfamily protein) HSP 1 Score: 381.7 bits (979), Expect = 4.400e-106 Identity = 196/325 (60.31%), Postives = 239/325 (73.54%), Query Frame = 1
BLAST of Spo07451.1 vs. TAIR (Arabidopsis)
Match: AT4G36010.1 (Pathogenesis-related thaumatin superfamily protein) HSP 1 Score: 329.7 bits (844), Expect = 2.000e-90 Identity = 163/275 (59.27%), Postives = 198/275 (72.00%), Query Frame = 1
BLAST of Spo07451.1 vs. TAIR (Arabidopsis)
Match: AT2G17860.1 (Pathogenesis-related thaumatin superfamily protein) HSP 1 Score: 320.1 bits (819), Expect = 1.600e-87 Identity = 148/234 (63.25%), Postives = 181/234 (77.35%), Query Frame = 1
BLAST of Spo07451.1 vs. TAIR (Arabidopsis)
Match: AT4G38670.1 (Pathogenesis-related thaumatin superfamily protein) HSP 1 Score: 318.2 bits (814), Expect = 6.000e-87 Identity = 149/256 (58.20%), Postives = 186/256 (72.66%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07451.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07451.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07451.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07451.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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