Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTGGGCCTTCATACTTCTTCAGTTCAGATTTAATCAAACAAAAAATCAAATCCAAGTTAAACAGAGAAATGTTGCCTTAATCCAAAAAACTCAGCCCAAATTCCAGAAATTTCCCCCAAAAGAAAAAACTGTTAACCAGAGCTGAGGAGTCGAAGGGGAAGAGAGATCAAACAAGCAAAGAAGCGAGAGAGAGAAATGAACATACTGTGGAAGAGCGAGTCATGGAGGAGAATCGTTGCAAAAACTCGGGATTCAAAGCCTTTCTTCTTCACATTTGCAATGGTTTGTGGGGTTATACCTGGGTGCGTCGGCTATGGTGTTATGCAAGTCACCAACTCTCGTAACGAAAAGCTCGAGTCCCATCTTCGCAACAAGTCTCGCCCTGAAACTCGGGTTTGTTGCTCTTCTTCTTCTCCAATTTTTTAATCTGCTAATTTTATTCATAGTATAAAATCATCGGGTTTTGATTTTCATTTATCAATTTTTTGTGTGCCCTTTTGATTGAATATGATGGGATTTTGATGAGTTCTTTTTGTTAGAAATGAGTTGGGGTTTATTTTGCTGCATGATTAGTGATATTCAATTGAATTGTTTGCAACATAACTTCACAGTTAATCAGACAAGGAAATGCAATTTTATCTGGGGAATGATGTATGAATGCTGTTGATTGGGTATTTTTTTACAATTGGGACAGTATGATGGAATACAAGTTAGTTTTTGTGGATTGAAAAACTCAAGGCTAACTTTAAGTATGGTGGAATATCAACTTTTAATTTTATTGCATAGTTAGAGATCTCATTGTCATGGCAAGGTTTATGAGAACACTGAGTTTTGAAAGCTATTTGTTAGTGAGACTTTGAAATAATGTGGTTATTTGGTTGATTGGAAACATAGGAAGTTGTATGTCCTAGAATGGGGGAGGTTGCTTACCTAGTCCCGCCCTAGGTTAGTTGAACTTATTAGGAGGCGGAGTTCCCTGGGAAATATAATGTCATGGAAGTGTAGCGACCTATGTGCAACCAAACAACCACTTAGAATTAAAGCGTGCCTTCCATTTCAGAGGGCTTTCATCAATAAGTGTATATGGAGTGATTTTCCATTTGTAGTCAGTGAGTTGCCTGCAAGACCAGAATCATTTAGGGAGCTTTTACTGGCATGTTTTAAAAGCTTGTCTACAGACCTATGTTTCTAAAACTCGTTGTTTAACCTTAAGTACACATGCTGGATCCTTAGCACTCCGACATGGGTGTGGACAACTGGACACCTGACACCATATTTTGGATCGAAACATGGCTATCTTTTACAAAATAACAGAGTCTAAGTATTCGAGTCCGAGTAACATGGCTTGTGAGGAAATTGACTCATGCGAAGACCCTTAAGCGTGATTTATGTTGGAACCTAGTACTTGCTGAAGATAAAATGTCGAGCACTGACTCAGCCTTTTAAATTATAATATGTGCTCGGGGTGACTTGGTTTAATATTGGAAAGATCTAGATAAGAGAAATTTGCCAGATAAGCTAAATCCATGTCCATATAGTATCAGCTTTGTGCCTGTATTTGTTTCCTTGCAGTAAAGATGTGCAGGGCTGCTGCTTCTGTGAATTTGTGGAACTCTAATCTTAGAGGCATAGAGGTAGAACTGTCAAATTTAGTGCTCTCTTCCTTGCATAGTTGCATTAGCTTTCCCAAGCTAGTTGGCTAGATCCTTAAAGATTAATCTAGCACTCTTCAAATGGCAAATTCATTCTTGTATTCCTCATTCTCTAGTTTCTCTATCTCTTCCTTGAAAGAACTGTGATTATAGCCCTTCCACTTAATTGTTTTAGATACACTAGTTACCTTTTCTTAATTGTCGAGAGTAATGACAAAAGGAAACAACCGACACATAGTGATATGACAAAACAAAGTTTTTTTCAACAAGTAAAAATCTTTTATTGCCAAAAGGGGTAATCAACAGACTACAAAAATACAAAGCCAACAGACCAAAAATTCACAAAAACTCACAGGAGCGGCAACCCAAACTACTAAATATGATCAGTATCACTTCCTCCCACCTTCTATAAGGGTGTAGAAACGAGAAAGCAACACATCACAATTGTATCAACAATAAATTCTTATCACTATCTGAACAGCAGCGGCAAGAGGTCTCCTTGAAAGTTTGCTCTATAGACTTCTGAGGCTTGCCAAAATCCTGCAATTTCTTTGCTGCCATATGCTGTAAACTGCTTCAGAAAAAGCAATAAGCTGAACTCTGCATTTAGCTGATTTTTTTAGCCACCCTGGCTGCATTTAACAACTGTGCATAAAATAACCGGCTGATCTGCCGACTTGTAATAGGTTGAAGACCTTCTGCCAGACCTCTTGACAAATAAAAAATTTCGTGGTGTAGGATAAAATATTTTATGTTTCTTTCTTCTTCAGTATTTTAAGCTCGAGAAGAAATTCTGTGTAGAAACCCTTCTGAGGTTTTCGAGAATTTTAGATGCCTTTTGCTCTTTTTTTGGCAGGGGAGAGTCAATGGAACCTTCTCTTTGGTAGAGTAATACTCCCTTGGTTTGCTTTTTGGTTGATTTCTAAAATATGAAGCATGGATTCACTTGTATATGTTTTATTAGTTAACTTGTATGGTGATAACAAAAGATTTTTCTAAGTTACAATGTTTAATGCTGCTATTGCTTTGCTCGGGAGTTGGGCTTGGGAGTATTTCTTCTTTGTACTATAGAATTGAGGAATAGAGAGGACTCAAGTGAAGTAAATATATACTCCACTTCACTATTGGCAGAATTGACTTTATGCATGTTGAGGGAATGAGGGTGTTCTGGGAAATTGTCTAGAGAATTATATTGTGGTAAGGGATAAATAGTCCTTTTCATGTACACTCTCTGTCCCCATTAATAGTGTTGTTTGACTTTTGAGGTCCAGTGTTTGACTGTAATGGTCTTGTAAACGTAGTGATTTGTAATCTTTGATAGAAATGAACTGAGAGGTAGTTGGTTGAATGTTGGTCTTGAAGATCACTAGATACATAGGGATTCTTAACTTGGGGCATAGATATGATCATTCGTTGTATGGATCCAAATATTAGATGACAGAATGTTTTGAAGGACATGCAGATCGCAGAGGTCATTGTTTGTTGCTTAGTTAAATATTGAACGCCTCAAATTTGGCAAAGTCCACATCTTTGTTTCTTATCCCGTGGTGTAGCAGCTATAGCGAAATTCTTTGGCTTTGTCTGATGATTAATCTTCTGGCTTATTTGATTGGAGGATTTGTGCAACAGTTGCATCAACTGCTTCAGTGTGGGATTTTTTTCAGCTCTTGTTGGCTTATGTTTGAGGAAGTACTTGTATGAGTTGTATCTTTTTTTGGGAAGTACACGTAGACATTGTTTCTCTTCTCTACTCTTCTTCTTTCTGAGGGGACATTTCAAATTTTCAACCATGTTTGGTGCATTTCGATCTATCAATTTAAAGTTTTGCCTTATGTGGTGCAGTGAAATGTGTTTCAACATCGAAGATGGTCCAATAGAGTGAACCTTGAATATGCGTGTTGTTGATGATGCAGGAAAATGAGAATACGATGAAATAATTTTACCTACCTGTCCCTGCTAATGTCTGACCTAGTTCTGCTTACGCTGCAGAATGCAATTACATTATGCTAGTAAAGACTGCAAACAGGAGAATGTTCCTCCCTCCATCCCTTAAAAGATTTTCCCATATCACAACTTTCACTTTGTTAAGGATTGTGCAAAGTTATGCACATGTTGGTAAGTTTTGCACATGAGGAGAGAGATAGAAAGAGAAAGTGGAAAAACATATCAAAAGTGGTATGAGGCAAACTCAAAGGGACATCCCAAAATAGTATATGGGGAAATCTTCAAGGACGAAGGGAGTATGAATTAACAGTGCACAGAGAAGCAATAGGATTGGACAATATTCAATAGTCAATACCGAAGCGTTACAAGGAACTCTTATTTATGGGACATAGAGATATTTAAGATATATGTCGAGTTGGCAAATATTTGATGAGTTTGAATTTATCATGTAAGCAAGGGTTATGTTATGAATGGATATATTGCTACCGACTCAATTATTCTGTATTGCTTTTATCTAAAAGAATTGATGCCTTTTGTTAAGAGGCCATTAAATTACTTGTGATGAAAGTAAATTCTCTGATCTGATGGAACCATTCTCAGTTGAAGTCAAGAGTTCAACTCAAAAGGTAGGGAATTCACTCTATTGGACGACGGCTGGACTTATGGGAGGAGTGCTAATTTGATTTAACCTCCACCATCCTCTTATCTTCTTTCATCCTTCAATGGCACATTATGACAATAATATTTCCTTTGTTTTAATTCGTTAATAGTTTGAAGTGCTACCCCTTACTCGAACAATCTTATTCTAATGTAGAGAGGGGTAAGGGGGAGAGACTTTTAAAGGGTCTACCTAAGCTTGTTGAGGAGTTGTGTTGTTTGATTTTGTTGCTTTTTTGCTTGAGTGTTATTAACAGGACTCTTCTTTTTATTGTTATTTATTAAACAAAATTAGGCCTACCAGAAAGATGGGGAGGGAAGGTTGGGGAGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGATGTTAACTAACTTTGATTTGTAATAAAACTGAAACTAGGAATAGAGTCGAGGCATATTATATTTTAGATGTTTTCTTGTCACCCGACATGACATTAGATTTTGATGATAACACTCAAACGATGAAATTTAAAAGCTGAAGATTTTGATCATACCATAATATGGAGCCCATGTATCTTCCTTCAAATCAAAAGGTATTGGGCAAAATTTGAATTGTTTTATTTTTTTCCATCCTTATTATGGTAATACAAAGCACGGAGGATGGATGTAAATGGTTTTTATGTAGGAATGCGTTTCATGGAATCTGTTGAAATATGGGGTAGCTCTGGAAAATTCTGTTTAAGCATGTAATTGTCATTAAGGTACTTTTGCTGAAAAGATTAGGGTTGAGATGCAAGGCAGTTAGATGAGACAGTGATTTACTGTTGGAGAGGGGTTGGGGAAGAGAGAAACCTGCCTATTAGTCTATTAGGTGCCTCTTTTAACTAATAAAAATTTGTATGTTTTTTCTTTTTTGGTAATATAAGCTCCTACAGTTTTACACCCCCGTTTCCTTTACAAGCAAAATTCCATCTCAAATTAGTTCATGAGTTTGTCTTGTATCCCTTGTTAATTTTCTTCAACTATAACATATTACTTGTATTCTGTAAGACGGAATTTAACTGTAGATATACTGCTTGTTGTTGTGATTCAGATGATGGGACAAGTGAATAAAGATAGGTTAGCTGAATATCTAGCAGAGCTGCAGCGGAAGGAAGACACAAATGACCGGTATGTGGCTGCTTTGAGAGGTGAAACGTTAACTAGAAATCCATATGTGAGAATTCAACCAATTCCTAAGCAAAATCCAACTGAAGTTACTGAACCTAAGAAAGAATAGAGAAGTGAACCAGTCCAGCTATCAGGTACCTTTTACATGATGATAGTATAGAACAATGCCCCGTTGAAACTAACTAGATCGAATCTTTTTGATGTTGATATTTGTGCATCAGAGGAGTTTACTGACATAAATCTGTGGATCTTCTGTTTTTCATATGTCTCAGCTGATATTGTCTGGAGGACTGTTACTTGAATCTTTGAAGAAATCAGTATATGTGTACTTGCGAATCCTTTGGAGGTTGTGTTTGAAGCTCAGGGCATGAATTTTTACCCGGTGTTCTTATTAATAACTCCCTCTCCTCCTCCTTTCAAATAGTAAAAACAAGAGGCATTGCAACACTCACTACGGCATTGAAGCCAGATTTCCCTTTCAGAAATTTTATTCCTGTACCATTTTTCTCAGATGCAACGAAATTTAATTTCCCTTCTTAAGTTAAGCTCCACAACTACTAATCGAATTGTTTGCAAATGTTGATTTTTAGTGATTTACTACTCTCGGAGTTGAATATACTAAAGTTTGTAATATGGTGTACAAACGCGCCAACAAATTTGCATTAACCTTGTATCATTATATAGATGATTTTAACGCATTGATTTGTTTGTATTATTCCGTACATTGGAGATTTGGAGGGTAGTATCTCAAATTCTGTGTCTCTAAATGTGTTAATCAATAGAAAAAAAAGAAGATTGAGGTTATGTTCTTTTACCTTATTCTTATTGTTTATTAGATCAGACTAGAAAAACAGACCATACTAGAAAACTTAAGATCAAACTAGAAAAATAAAAGGCACTCGAAATATA TGTTGGGCCTTCATACTTCTTCAGTTCAGATTTAATCAAACAAAAAATCAAATCCAAGTTAAACAGAGAAATGTTGCCTTAATCCAAAAAACTCAGCCCAAATTCCAGAAATTTCCCCCAAAAGAAAAAACTGTTAACCAGAGCTGAGGAGTCGAAGGGGAAGAGAGATCAAACAAGCAAAGAAGCGAGAGAGAGAAATGAACATACTGTGGAAGAGCGAGTCATGGAGGAGAATCGTTGCAAAAACTCGGGATTCAAAGCCTTTCTTCTTCACATTTGCAATGGTTTGTGGGGTTATACCTGGGTGCGTCGGCTATGGTGTTATGCAAGTCACCAACTCTCGTAACGAAAAGCTCGAGTCCCATCTTCGCAACAAGTCTCGCCCTGAAACTCGGATGATGGGACAAGTGAATAAAGATAGGTTAGCTGAATATCTAGCAGAGCTGCAGCGGAAGGAAGACACAAATGACCGGTATGTGGCTGCTTTGAGAGGTGAAACGTTAACTAGAAATCCATATGTGAGAATTCAACCAATTCCTAAGCAAAATCCAACTGAAGTTACTGAACCTAAGAAAGAATAGAGAAGTGAACCAGTCCAGCTATCAGCTGATATTGTCTGGAGGACTGTTACTTGAATCTTTGAAGAAATCAGTATATGTGTACTTGCGAATCCTTTGGAGGTTGTGTTTGAAGCTCAGGGCATGAATTTTTACCCGGTGTTCTTATTAATAACTCCCTCTCCTCCTCCTTTCAAATAGTAAAAACAAGAGGCATTGCAACACTCACTACGGCATTGAAGCCAGATTTCCCTTTCAGAAATTTTATTCCTGTACCATTTTTCTCAGATGCAACGAAATTTAATTTCCCTTCTTAAGTTAAGCTCCACAACTACTAATCGAATTGTTTGCAAATGTTGATTTTTAGTGATTTACTACTCTCGGAGTTGAATATACTAAAGTTTGTAATATGGTGTACAAACGCGCCAACAAATTTGCATTAACCTTGTATCATTATATAGATGATTTTAACGCATTGATTTGTTTGTATTATTCCGTACATTGGAGATTTGGAGGGTAGTATCTCAAATTCTGTGTCTCTAAATGTGTTAATCAATAGAAAAAAAAGAAGATTGAGGTTATGTTCTTTTACCTTATTCTTATTGTTTATTAGATCAGACTAGAAAAACAGACCATACTAGAAAACTTAAGATCAAACTAGAAAAATAAAAGGCACTCGAAATATA ATGAACATACTGTGGAAGAGCGAGTCATGGAGGAGAATCGTTGCAAAAACTCGGGATTCAAAGCCTTTCTTCTTCACATTTGCAATGGTTTGTGGGGTTATACCTGGGTGCGTCGGCTATGGTGTTATGCAAGTCACCAACTCTCGTAACGAAAAGCTCGAGTCCCATCTTCGCAACAAGTCTCGCCCTGAAACTCGGATGATGGGACAAGTGAATAAAGATAGGTTAGCTGAATATCTAGCAGAGCTGCAGCGGAAGGAAGACACAAATGACCGGTATGTGGCTGCTTTGAGAGGTGAAACGTTAACTAGAAATCCATATGTGAGAATTCAACCAATTCCTAAGCAAAATCCAACTGAAGTTACTGAACCTAAGAAAGAATAG MNILWKSESWRRIVAKTRDSKPFFFTFAMVCGVIPGCVGYGVMQVTNSRNEKLESHLRNKSRPETRMMGQVNKDRLAEYLAELQRKEDTNDRYVAALRGETLTRNPYVRIQPIPKQNPTEVTEPKKE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07458.1 vs. NCBI nr
Match: gi|902156682|gb|KNA06036.1| (hypothetical protein SOVF_184790 [Spinacia oleracea]) HSP 1 Score: 258.1 bits (658), Expect = 8.200e-66 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Spo07458.1 vs. NCBI nr
Match: gi|731331728|ref|XP_010676814.1| (PREDICTED: uncharacterized protein LOC104892549 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 229.9 bits (585), Expect = 2.400e-57 Identity = 115/127 (90.55%), Postives = 119/127 (93.70%), Query Frame = 1
BLAST of Spo07458.1 vs. NCBI nr
Match: gi|802607800|ref|XP_012073996.1| (PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]) HSP 1 Score: 190.3 bits (482), Expect = 2.100e-45 Identity = 94/128 (73.44%), Postives = 108/128 (84.38%), Query Frame = 1
BLAST of Spo07458.1 vs. NCBI nr
Match: gi|764555086|ref|XP_011460564.1| (PREDICTED: uncharacterized protein LOC101299359 [Fragaria vesca subsp. vesca]) HSP 1 Score: 188.0 bits (476), Expect = 1.000e-44 Identity = 92/126 (73.02%), Postives = 108/126 (85.71%), Query Frame = 1
BLAST of Spo07458.1 vs. NCBI nr
Match: gi|695060772|ref|XP_009418790.1| (PREDICTED: uncharacterized protein LOC103998907 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 187.2 bits (474), Expect = 1.800e-44 Identity = 88/121 (72.73%), Postives = 107/121 (88.43%), Query Frame = 1
BLAST of Spo07458.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHE1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_184790 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 5.700e-66 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Spo07458.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CJW6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g103260 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 1.700e-57 Identity = 115/127 (90.55%), Postives = 119/127 (93.70%), Query Frame = 1
BLAST of Spo07458.1 vs. UniProtKB/TrEMBL
Match: A0A067KW35_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09504 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.500e-45 Identity = 94/128 (73.44%), Postives = 108/128 (84.38%), Query Frame = 1
BLAST of Spo07458.1 vs. UniProtKB/TrEMBL
Match: M0U3B4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.200e-44 Identity = 88/121 (72.73%), Postives = 107/121 (88.43%), Query Frame = 1
BLAST of Spo07458.1 vs. UniProtKB/TrEMBL
Match: M0VC14_HORVD (Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.100e-44 Identity = 89/127 (70.08%), Postives = 110/127 (86.61%), Query Frame = 1
BLAST of Spo07458.1 vs. TAIR (Arabidopsis)
Match: AT1G79390.1 (unknown protein) HSP 1 Score: 169.5 bits (428), Expect = 1.400e-42 Identity = 81/118 (68.64%), Postives = 99/118 (83.90%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07458.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07458.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07458.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo07458.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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