Spo07599 (gene)

Overview
NameSpo07599
Typegene
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L37a-2
Locationchr1 : 43561068 .. 43563332 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTTTTTTTACTTTTATCAATTTTAAATAAAGAAAAGGTAATTTGAGAATTATCATAGTGAGCAATGGGCCAACCATGAATATAATGACAAATTGACAATCCACCCATACACCCATTAAAAGCCCAAAGAAGCAAAAGTGGACTGTAAATCTACTAACCCTAACCCAATCCTATTTTATTAAGTTCGCTGTTTTTTTCTTCTTCGTTTTCTCTGCACGCCGTCGACTCCCCAACCATGGTAATTTCTCTCTCCTCCTCTCTCTTCATTTGGAATCTGTGGAATGTCAAATGACTGGTACTTTGTTTTTGATTTGATGTGGGGGGTTTTGTATTATCATGTTCATGCCGATTGTGAGCTTAATTTTTGGCTTTGGGGTTGAAATCGAAGATTTCTAGGGTTTATGCAATTAAATTTTGGAATCTGTGGATTTGGGTCAATTTTTAGGGGTTGTTTTCTACATGTTTGAGATTCATGATTATGGAGTCTTTTCTTTAAGATTTGTTTATAATATATTGATACTATACGATGTTATGTTATTGGCATGATAATATCATTGTCACGCCGTATTAATTATGGGTGTGTAGATTGACAAAATGTTCTAGGGTTTATGCTCGGACAATGTTTTTTAGGTTGAAATAAGCCCTTGATTGAACTGAACTGAATAGCGAGAGAGTTGCAATTTTTGCATTGTTTATTTTTTTGTTATTGATGCCATTTGTTTGTTGTACAATTTTGGGTGAGCTGAGTTGAGTTAGTAATGCTCATTATAGTTCTGTAAATTTTTTCTGTTCGCCACTTTTAAATTTGAATGTTGTTGATGCATACAGGCCAAGAGAACCAAGAAGGTCGGTATTGTCGGGAAATACGGTGAGTTCGGCTGTGATCATGTTGTCGGGATGTCATATCGCATAACATAATGCCATTTGATTGGAATAGAGTCTTTGACATCAGTGAGGGAAACAAGAAATCATATCTGGCATTCTTGATATTATGCATTTGATATATTTTTGTCTAGAACTGCTTCATATTTATAATGAGAAGTTAGTTCAAGACTTTTCCTGTTTGATTAATTTTGAATTAGGAGTGAGTTATTACTTTTGTTATCACAATTAATTAATATCATTGTGTTGTTTAGGTACCCGATATGGTGCCAGTCTGCGTAAGCAGATTAAGAAGATGGAGGTGAGTCAACACAGCAAGTACTTTTGTGAGTTCTGCGGAAAGGTAAAGCTCCATTCTTTAATCAATATCTATCTATTGTCTGTGAATCAACTTAATTTTTGATGTCTGATTGTAAAAACACTATGATGCAGTACGCCGTGAAGAGACAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGGAAGGTCAAGGCTGGTGGTGCTTACACTTTGAAGTAGGGGATCTTTACATAAACTAATGCTAATTATACATAATAATTTCATTGTTTTTATTTCTTTACTGATTTGTTTTCTATGTTTGAACAGCACCGCCAGTGCAGTGACAGTGAGAAGTACAATCAGGAGGCTCAGGGAGCAGACTGAGAGTTAGATCTTTCACTAGTGCTTATCTTTTGAAAACAATTAGAGAATTAGAGAGTTGGTGTTTTTTACTTCTGAATTCTGTTGGTTCTCCCTTTACCTTGTTATTCCGGGGAATCCTAATTTCAGTAGATATTTGAGTTTCAACATTACGAAAGCAATTGTTCTGCTGGTTTTCGCTGATCCTTTTGGAAAGGTGATTTAATCCGGGATTGGGTTGGATTTGTCGATGAGTTTTTGGGTAGCACTGTGGTTTTGTTTTTGTTGTTGCATCATATGAAATATGCATTTATGTTTTGCTTGAAATTTGGTATTAAAAAATGGAGACCGAGTTATGGCCCTATTGTTTCACACATGGTTAGCACTTAGCATAGTGAGCTAGATTAGGCTGTATTGCTTCATTCCCTGTGTACCCTGCATTGGCTGCATATTCATAGAAAACAAGTTAGTACTGCATGCTAGTGAGAGCTGATTCTGTCAGATTTGCAAGTGTGTGGCTATGTTTTGTTATGGTGTTTGGTTCACAAGTTAGAGGTGATGTGTCTGCAGTTCTAAACTTCTATGGTATGGAAATGGAAGTATTAGGGTATGAACTGTGAAGTTTCCAAAAAGCATCATTCAATGGAGCTTTACTGAGTAAGAACATAAATAAAACCCAACCCTAAACCTTGACTAGTTATCAAGCTCTTTTAACTGAAGTACTGCATTAACATTAAC

mRNA sequence

TTTTTTTTTTTTTTTACTTTTATCAATTTTAAATAAAGAAAAGGTAATTTGAGAATTATCATAGTGAGCAATGGGCCAACCATGAATATAATGACAAATTGACAATCCACCCATACACCCATTAAAAGCCCAAAGAAGCAAAAGTGGACTGTAAATCTACTAACCCTAACCCAATCCTATTTTATTAAGTTCGCTGTTTTTTTCTTCTTCGTTTTCTCTGCACGCCGTCGACTCCCCAACCATGGCCAAGAGAACCAAGAAGGTCGGTATTGTCGGGAAATACGGTACCCGATATGGTGCCAGTCTGCGTAAGCAGATTAAGAAGATGGAGGTGAGTCAACACAGCAAGTACTTTTGTGAGTTCTGCGGAAAGTACGCCGTGAAGAGACAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGGAAGGTCAAGGCTGGTGGTGCTTACACTTTGAACACCGCCAGTGCAGTGACAGTGAGAAGTACAATCAGGAGGCTCAGGGAGCAGACTGAGAGTTAGATCTTTCACTAGTGCTTATCTTTTGAAAACAATTAGAGAATTAGAGAGTTGGTGTTTTTTACTTCTGAATTCTGTTGGTTCTCCCTTTACCTTGTTATTCCGGGGAATCCTAATTTCAGTAGATATTTGAGTTTCAACATTACGAAAGCAATTGTTCTGCTGGTTTTCGCTGATCCTTTTGGAAAGGTGATTTAATCCGGGATTGGGTTGGATTTGTCGATGAGTTTTTGGGTAGCACTGTGGTTTTGTTTTTGTTGTTGCATCATATGAAATATGCATTTATGTTTTGCTTGAAATTTGGTATTAAAAAATGGAGACCGAGTTATGGCCCTATTGTTTCACACATGGTTAGCACTTAGCATAGTGAGCTAGATTAGGCTGTATTGCTTCATTCCCTGTGTACCCTGCATTGGCTGCATATTCATAGAAAACAAGTTAGTACTGCATGCTAGTGAGAGCTGATTCTGTCAGATTTGCAAGTGTGTGGCTATGTTTTGTTATGGTGTTTGGTTCACAAGTTAGAGGTGATGTGTCTGCAGTTCTAAACTTCTATGGTATGGAAATGGAAGTATTAGGGTATGAACTGTGAAGTTTCCAAAAAGCATCATTCAATGGAGCTTTACTGAGTAAGAACATAAATAAAACCCAACCCTAAACCTTGACTAGTTATCAAGCTCTTTTAACTGAAGTACTGCATTAACATTAAC

Coding sequence (CDS)

ATGGCCAAGAGAACCAAGAAGGTCGGTATTGTCGGGAAATACGGTACCCGATATGGTGCCAGTCTGCGTAAGCAGATTAAGAAGATGGAGGTGAGTCAACACAGCAAGTACTTTTGTGAGTTCTGCGGAAAGTACGCCGTGAAGAGACAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGGAAGGTCAAGGCTGGTGGTGCTTACACTTTGAACACCGCCAGTGCAGTGACAGTGAGAAGTACAATCAGGAGGCTCAGGGAGCAGACTGAGAGTTAG

Protein sequence

MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07599.1Spo07599.1mRNA


Homology
[Close]
BLAST of Spo07599.1 vs. NCBI nr
Match: gi|848866574|ref|XP_012833952.1| (PREDICTED: 60S ribosomal protein L37a-like [Erythranthe guttata])

HSP 1 Score: 185.7 bits (470), Expect = 3.800e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
[Close]
BLAST of Spo07599.1 vs. NCBI nr
Match: gi|747043785|ref|XP_011085665.1| (PREDICTED: 60S ribosomal protein L37a [Sesamum indicum])

HSP 1 Score: 184.1 bits (466), Expect = 1.100e-43
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKR+AVGIWGCKDC
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
[Close]
BLAST of Spo07599.1 vs. NCBI nr
Match: gi|604343407|gb|EYU42327.1| (hypothetical protein MIMGU_mgv1a0171311mg, partial [Erythranthe guttata])

HSP 1 Score: 181.8 bits (460), Expect = 5.400e-43
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 1 

		  

Query: 2  AKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDCG 61
          AKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKR+AVGIWGCKDCG
Sbjct: 1  AKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60

Query: 62 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 91
[Close]
BLAST of Spo07599.1 vs. NCBI nr
Match: gi|702272875|ref|XP_010043792.1| (PREDICTED: 60S ribosomal protein L37a-like [Eucalyptus grandis])

HSP 1 Score: 181.4 bits (459), Expect = 7.100e-43
Identity = 88/92 (95.65%), Postives = 92/92 (100.00%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          MAKRTKKVGIVGKYGTRYGASLRKQIKKMEV+QHSKYFCEFCGKYAVKR++VGIWGCKDC
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVTQHSKYFCEFCGKYAVKRKSVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GK+KAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKIKAGGAYTLNTASAVTVRSTIRRLREQTES 92
[Close]
BLAST of Spo07599.1 vs. NCBI nr
Match: gi|595849622|ref|XP_007209764.1| (hypothetical protein PRUPE_ppa013350mg [Prunus persica])

HSP 1 Score: 181.0 bits (458), Expect = 9.300e-43
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 1 

		  

Query: 1   MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
           M KRTKK GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKR+AVGIWGCKDC
Sbjct: 37  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 96

Query: 61  GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
           GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 97  GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 128
[Close]
BLAST of Spo07599.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0Q1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_007820 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.600e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
[Close]
BLAST of Spo07599.1 vs. UniProtKB/TrEMBL
Match: A0A022RJG1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017136mg PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.600e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
[Close]
BLAST of Spo07599.1 vs. UniProtKB/TrEMBL
Match: A0A022RPB9_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a0171311mg PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.800e-43
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 1 

		  

Query: 2  AKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDCG 61
          AKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKR+AVGIWGCKDCG
Sbjct: 1  AKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60

Query: 62 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 91
[Close]
BLAST of Spo07599.1 vs. UniProtKB/TrEMBL
Match: A0A058ZS13_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01912 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 4.900e-43
Identity = 88/92 (95.65%), Postives = 92/92 (100.00%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          MAKRTKKVGIVGKYGTRYGASLRKQIKKMEV+QHSKYFCEFCGKYAVKR++VGIWGCKDC
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVTQHSKYFCEFCGKYAVKRKSVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GK+KAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKIKAGGAYTLNTASAVTVRSTIRRLREQTES 92
[Close]
BLAST of Spo07599.1 vs. UniProtKB/TrEMBL
Match: A0A067JYD1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14663 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 6.500e-43
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          M KRTKK GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKR+AVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
[Close]
BLAST of Spo07599.1 vs. ExPASy Swiss-Prot
Match: RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 4.900e-44
Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          M KRTKK GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKR+AVGIWGCK C
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKAC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
[Close]
BLAST of Spo07599.1 vs. ExPASy Swiss-Prot
Match: RL371_ORYSJ (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 6.400e-44
Identity = 86/92 (93.48%), Postives = 90/92 (97.83%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          M KRTKK GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKR+AVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92
[Close]
BLAST of Spo07599.1 vs. ExPASy Swiss-Prot
Match: RL372_ORYSJ (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 6.400e-44
Identity = 86/92 (93.48%), Postives = 90/92 (97.83%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          M KRTKK GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKR+AVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92
[Close]
BLAST of Spo07599.1 vs. ExPASy Swiss-Prot
Match: R37A2_ARATH (60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 8.400e-44
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          MAKRTKKVGIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKR+AVGIWGCKDC
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 92
          GKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91
[Close]
BLAST of Spo07599.1 vs. ExPASy Swiss-Prot
Match: RL37A_PSEMZ (60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 5.400e-43
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          M KRTKK GIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKR+AVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 92
          GKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Sbjct: 61 GKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
[Close]
BLAST of Spo07599.1 vs. TAIR (Arabidopsis)
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein)

HSP 1 Score: 177.2 bits (448), Expect = 4.700e-45
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          MAKRTKKVGIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKR+AVGIWGCKDC
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 92
          GKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91
[Close]
BLAST of Spo07599.1 vs. TAIR (Arabidopsis)
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein)

HSP 1 Score: 173.3 bits (438), Expect = 6.800e-44
Identity = 84/92 (91.30%), Postives = 88/92 (95.65%), Query Frame = 1 

		  

Query: 1  MAKRTKKVGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRQAVGIWGCKDC 60
          M KRTKK  IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKR+ VGIWGCKDC
Sbjct: 1  MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92
The following BLAST results are available for this feature:
BLAST of Spo07599.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|848866574|ref|XP_012833952.1|3.8e-44100.PREDICTED: 60S ribosomal prote... [more]
gi|747043785|ref|XP_011085665.1|1.1e-4398.9PREDICTED: 60S ribosomal prote... [more]
gi|604343407|gb|EYU42327.1|5.4e-4398.9hypothetical protein MIMGU_mgv... [more]
gi|702272875|ref|XP_010043792.1|7.1e-4395.6PREDICTED: 60S ribosomal prote... [more]
gi|595849622|ref|XP_007209764.1|9.3e-4396.7hypothetical protein PRUPE_ppa... [more]
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BLAST of Spo07599.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S0Q1_SPIOL2.6e-44100.Uncharacterized protein OS=Spi... [more]
A0A022RJG1_ERYGU2.6e-44100.Uncharacterized protein OS=Ery... [more]
A0A022RPB9_ERYGU3.8e-4398.9Uncharacterized protein (Fragm... [more]
A0A058ZS13_EUCGR4.9e-4395.6Uncharacterized protein OS=Euc... [more]
A0A067JYD1_JATCU6.5e-4396.7Uncharacterized protein OS=Jat... [more]
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BLAST of Spo07599.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL37A_GOSHI4.9e-4495.660S ribosomal protein L37a OS=... [more]
RL371_ORYSJ6.4e-4493.460S ribosomal protein L37a-1 O... [more]
RL372_ORYSJ6.4e-4493.460S ribosomal protein L37a-2 O... [more]
R37A2_ARATH8.4e-4494.560S ribosomal protein L37a-2 O... [more]
RL37A_PSEMZ5.4e-4393.460S ribosomal protein L37a OS=... [more]
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BLAST of Spo07599.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G60245.14.7e-4594.5Zinc-binding ribosomal protein... [more]
AT3G10950.16.8e-4491.3Zinc-binding ribosomal protein... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002674Ribosomal protein L37aeHAMAPMF_00327Ribosomal_L37Aecoord: 4..72
score: 19
IPR002674Ribosomal protein L37aePFAMPF01780Ribosomal_L37aecoord: 4..88
score: 5.3
IPR002674Ribosomal protein L37aeTIGRFAMsTIGR00280TIGR00280coord: 1..91
score: 7.9
IPR011331Ribosomal protein L37ae/L37eGENE3D2.20.25.30coord: 10..91
score: 1.5
IPR011332Zinc-binding ribosomal proteinunknownSSF57829Zn-binding ribosomal proteinscoord: 10..82
score: 8.55
NoneNo IPR availableunknownCoilCoilcoord: 83..92
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006414 translational elongation
biological_process GO:0001510 RNA methylation
biological_process GO:0006354 DNA-templated transcription, elongation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005730 nucleolus
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
RNA-Seq Expression