Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCAATATAAAGTTTGCTTAATTAATTAAATTATTAAGAGTTCACCATGGCAGCAACAACAAAGAGCATTGTAGATGTTGAATATCTGAAACAAATTGAGGGAGCTCGTAAAGACCTTCTTGATCTTCTTCAGAAGAACAAGAAGTTTTCTCCCATTGTGCTTCGTTTAGCGTAAGTTTTCTTCTTCACTTCTTTAACAATTATGCGCATGTTACAACTAAAACTATTTTTTATTTAATTACCCCTCTTTTGTAAATGTTGTTTATAGCATTTTCTAATTTGGTTTTGGTGGTGTAGATTTCATGAAGCGGGTACTTATGACGCCAAAACTAAAACAGGAGGTCCAAATGGTTCGATTAGGAATGAGTTGAACAACCCTGCCAACAACGGTATCAAAGTTGGAGTTGATTTTTGCGGTAAATCATCTAACTAAAACCTAGCTACATTATGCTATTTTCCCTTCATGTTAGTTGTTATGTTGTGTATGTGCGCGCGCGGTTGAGCGTGAAGGCATTTGCCTATATACCATAAATAACTTGTTTAATTTCATACTTTCTCAGAACAAGTGAAGGGTAAACACCCCAAAGTTACTTATGCTGACTTTTACCAGGTAAATTTTCTTAGTCATTAATATGAATAACTCCCCTAATTTATGAAAGTTCTTAACTCATGAAATTTGTGTCCAAACTCATAACCAAATGTCAAATTTATCAAAGTATTATCTTGTGAGATTTTATTAGATTCTTATTGAAATATTTTTTAAAATATCAATTTTTTTATATAATTTTTTCACATACGAAATTGAATATATTAATTAATAGTTAAAATTATATTAGAGTCTGTATAAATAATAAACGTTAAGAAGTTCCAGGACGAGGTAACTGCGTAAAGTATGGCTCGATCACTTCTTAATTACTTTCTCATATTTTGTTATTCTATTCGACCAGCTTGCTGGAGTAATTGCTGTTGAAGTTACTGGAGGCCCTAAGATCCCATTTTTCCCGGGTCGACCCGTAAGTGGCACACGTTAACATGAACATTAATTCAAATTAAATGGATTAACGAATTATGTTGTAATTTTTGTCTCCAAGTATTTTTTTTACTATAACCTCACCCTAAACCTTGTTCAAAATATATAGGATGCGCCAAGTCAACAAGACAGTGGAGCTCTTCCAAACCCCAATGGAGGTACATAGCAAATTAATTGACAACACTAATTCACGGATCTTTTACCAAACTAGCTACTTTTACAATTTTATTTATCAAAATGGCTACTTTTAAAATCTATTTACCAAACTAGCTATTACGTATAATTTATTTACCAAAATGACTATTTTCATTTTGTGGAAAAAACAATTAAACTCCGTAATACTATAACATTTATCCATTACTACGTAGTAGTCTATATGATTAAGGTAATAATTAATGTGGATTGTTCATTTGTGGTTGTAGATGCCAAGCATCTTAGGGATATATTTTATCGTATGGGGTTGAACGATAGGGATATCGTTGCTCTATCAGGATCTCACACACTGGTACGTCCATAATTTATTTATTTTGTACGTCGATAATTTATTTATTTACTCCCTCCGATGCGTCTCATATTAACAAAAAAAACCCTCTACTTTTCATTAAAAGTAGGGGCCTTTCAAAATTTTATTCCTTATATACGTATTAAACTATACACAGGGTCGAGCAAATCAGGATAGATCAGGTTTTGATGGTCCTTTCACCGAGGATCCTTTCAAATTCGATAATTCGTATTTTGTGTAAGATCTCATTTAAATTTTTTTTATGTTACTGAAATCCAGATAAATTAATGCATGTACTTATCATATATCCTAATATAGTTGATTCAAAAGATTATAACTGAACTGATTAATCATATTATTATATGGTGATCAGAAACTTGAGGAAGAGTGACACCCCTGGACTGGTGAAATTCCCCACTGACAAAGTTCTTGTGGAAGATCCTGCTTTCAGTCGCTATGTTCAACTCTATGCTAAGGTAATACATTATTCTTACAACTTACAACTTATATAGTTTATTAGTCATGTCAATTAAGTACTGCATAGGTGTGCCAAAATCAATTTAATCATTATTTTTCGTACATCATGTGTTCCCTAGTACGTAAAATGAACTGATTAAGAGTACTTATGTTATAAAATGGCAGGATGAAAAGACTTTCTTCGCACACTATGCGGAATCACACAAGAAGATGTCGGAGCTCGGGTTTCGCCCACCAAGCCCGGTCGTGAAAGCTTGAAATCGCAGCCTAGCTAGACTGAGAATCTGAGATGTAGTATAATGGATCCTTAATTAATTGTCTTCACGTTGTATTTGGGACTAATAATTAAAAGCTAAGTTAAATAATTCCCAGGAGTTGTACTCATATTAAATTATTAATTATTAATTATGTACTTGCTATATACTTGTATTCCATACAAAAATGTATTATGTACTTCTATTAAAATGCTAATCTATTA TCCAATATAAAGTTTGCTTAATTAATTAAATTATTAAGAGTTCACCATGGCAGCAACAACAAAGAGCATTGTAGATGTTGAATATCTGAAACAAATTGAGGGAGCTCGTAAAGACCTTCTTGATCTTCTTCAGAAGAACAAGAAGTTTTCTCCCATTGTGCTTCGTTTAGCATTTCATGAAGCGGGTACTTATGACGCCAAAACTAAAACAGGAGGTCCAAATGGTTCGATTAGGAATGAGTTGAACAACCCTGCCAACAACGGTATCAAAGTTGGAGTTGATTTTTGCGAACAAGTGAAGGGTAAACACCCCAAAGTTACTTATGCTGACTTTTACCAGCTTGCTGGAGTAATTGCTGTTGAAGTTACTGGAGGCCCTAAGATCCCATTTTTCCCGGGTCGACCCGATGCGCCAAGTCAACAAGACAGTGGAGCTCTTCCAAACCCCAATGGAGATGCCAAGCATCTTAGGGATATATTTTATCGTATGGGGTTGAACGATAGGGATATCGTTGCTCTATCAGGATCTCACACACTGGGTCGAGCAAATCAGGATAGATCAGGTTTTGATGGTCCTTTCACCGAGGATCCTTTCAAATTCGATAATTCGTATTTTGTAAACTTGAGGAAGAGTGACACCCCTGGACTGGTGAAATTCCCCACTGACAAAGTTCTTGTGGAAGATCCTGCTTTCAGTCGCTATGTTCAACTCTATGCTAAGGATGAAAAGACTTTCTTCGCACACTATGCGGAATCACACAAGAAGATGTCGGAGCTCGGGTTTCGCCCACCAAGCCCGGTCGTGAAAGCTTGAAATCGCAGCCTAGCTAGACTGAGAATCTGAGATGTAGTATAATGGATCCTTAATTAATTGTCTTCACGTTGTATTTGGGACTAATAATTAAAAGCTAAGTTAAATAATTCCCAGGAGTTGTACTCATATTAAATTATTAATTATTAATTATGTACTTGCTATATACTTGTATTCCATACAAAAATGTATTATGTACTTCTATTAAAATGCTAATCTATTA ATGGCAGCAACAACAAAGAGCATTGTAGATGTTGAATATCTGAAACAAATTGAGGGAGCTCGTAAAGACCTTCTTGATCTTCTTCAGAAGAACAAGAAGTTTTCTCCCATTGTGCTTCGTTTAGCATTTCATGAAGCGGGTACTTATGACGCCAAAACTAAAACAGGAGGTCCAAATGGTTCGATTAGGAATGAGTTGAACAACCCTGCCAACAACGGTATCAAAGTTGGAGTTGATTTTTGCGAACAAGTGAAGGGTAAACACCCCAAAGTTACTTATGCTGACTTTTACCAGCTTGCTGGAGTAATTGCTGTTGAAGTTACTGGAGGCCCTAAGATCCCATTTTTCCCGGGTCGACCCGATGCGCCAAGTCAACAAGACAGTGGAGCTCTTCCAAACCCCAATGGAGATGCCAAGCATCTTAGGGATATATTTTATCGTATGGGGTTGAACGATAGGGATATCGTTGCTCTATCAGGATCTCACACACTGGGTCGAGCAAATCAGGATAGATCAGGTTTTGATGGTCCTTTCACCGAGGATCCTTTCAAATTCGATAATTCGTATTTTGTAAACTTGAGGAAGAGTGACACCCCTGGACTGGTGAAATTCCCCACTGACAAAGTTCTTGTGGAAGATCCTGCTTTCAGTCGCTATGTTCAACTCTATGCTAAGGATGAAAAGACTTTCTTCGCACACTATGCGGAATCACACAAGAAGATGTCGGAGCTCGGGTTTCGCCCACCAAGCCCGGTCGTGAAAGCTTGA MAATTKSIVDVEYLKQIEGARKDLLDLLQKNKKFSPIVLRLAFHEAGTYDAKTKTGGPNGSIRNELNNPANNGIKVGVDFCEQVKGKHPKVTYADFYQLAGVIAVEVTGGPKIPFFPGRPDAPSQQDSGALPNPNGDAKHLRDIFYRMGLNDRDIVALSGSHTLGRANQDRSGFDGPFTEDPFKFDNSYFVNLRKSDTPGLVKFPTDKVLVEDPAFSRYVQLYAKDEKTFFAHYAESHKKMSELGFRPPSPVVKA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07616.1 vs. NCBI nr
Match: gi|902219359|gb|KNA18297.1| (hypothetical protein SOVF_072200 [Spinacia oleracea]) HSP 1 Score: 522.3 bits (1344), Expect = 4.700e-145 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Spo07616.1 vs. NCBI nr
Match: gi|902239239|gb|KNA25519.1| (hypothetical protein SOVF_006050 [Spinacia oleracea]) HSP 1 Score: 506.1 bits (1302), Expect = 3.500e-140 Identity = 243/255 (95.29%), Postives = 251/255 (98.43%), Query Frame = 1
BLAST of Spo07616.1 vs. NCBI nr
Match: gi|731337647|ref|XP_010679900.1| (PREDICTED: L-ascorbate peroxidase 3, peroxisomal-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 435.3 bits (1118), Expect = 7.600e-119 Identity = 211/253 (83.40%), Postives = 228/253 (90.12%), Query Frame = 1
BLAST of Spo07616.1 vs. NCBI nr
Match: gi|731337651|ref|XP_010679902.1| (PREDICTED: L-ascorbate peroxidase 3, peroxisomal-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 417.9 bits (1073), Expect = 1.200e-113 Identity = 198/249 (79.52%), Postives = 217/249 (87.15%), Query Frame = 1
BLAST of Spo07616.1 vs. NCBI nr
Match: gi|902219360|gb|KNA18298.1| (hypothetical protein SOVF_072210 [Spinacia oleracea]) HSP 1 Score: 411.4 bits (1056), Expect = 1.200e-111 Identity = 195/246 (79.27%), Postives = 219/246 (89.02%), Query Frame = 1
BLAST of Spo07616.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHH8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072200 PE=3 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 3.300e-145 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Spo07616.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2V5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006050 PE=3 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 2.400e-140 Identity = 243/255 (95.29%), Postives = 251/255 (98.43%), Query Frame = 1
BLAST of Spo07616.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCA4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130340 PE=3 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 5.300e-119 Identity = 211/253 (83.40%), Postives = 228/253 (90.12%), Query Frame = 1
BLAST of Spo07616.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCA7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130390 PE=3 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 8.700e-114 Identity = 198/249 (79.52%), Postives = 217/249 (87.15%), Query Frame = 1
BLAST of Spo07616.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFM8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072210 PE=3 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 8.100e-112 Identity = 195/246 (79.27%), Postives = 219/246 (89.02%), Query Frame = 1
BLAST of Spo07616.1 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.200e-87 Identity = 160/250 (64.00%), Postives = 194/250 (77.60%), Query Frame = 1
BLAST of Spo07616.1 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=1 SV=2) HSP 1 Score: 318.9 bits (816), Expect = 4.900e-86 Identity = 160/249 (64.26%), Postives = 191/249 (76.71%), Query Frame = 1
BLAST of Spo07616.1 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=3 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.500e-85 Identity = 152/244 (62.30%), Postives = 188/244 (77.05%), Query Frame = 1
BLAST of Spo07616.1 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 5.500e-85 Identity = 151/244 (61.89%), Postives = 188/244 (77.05%), Query Frame = 1
BLAST of Spo07616.1 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 2.100e-81 Identity = 148/245 (60.41%), Postives = 186/245 (75.92%), Query Frame = 1
BLAST of Spo07616.1 vs. TAIR (Arabidopsis)
Match: AT4G35000.1 (ascorbate peroxidase 3) HSP 1 Score: 324.3 bits (830), Expect = 6.600e-89 Identity = 160/250 (64.00%), Postives = 194/250 (77.60%), Query Frame = 1
BLAST of Spo07616.1 vs. TAIR (Arabidopsis)
Match: AT4G35970.1 (ascorbate peroxidase 5) HSP 1 Score: 318.9 bits (816), Expect = 2.800e-87 Identity = 160/249 (64.26%), Postives = 191/249 (76.71%), Query Frame = 1
BLAST of Spo07616.1 vs. TAIR (Arabidopsis)
Match: AT3G09640.1 (ascorbate peroxidase 2) HSP 1 Score: 254.6 bits (649), Expect = 6.400e-68 Identity = 127/240 (52.92%), Postives = 166/240 (69.17%), Query Frame = 1
BLAST of Spo07616.1 vs. TAIR (Arabidopsis)
Match: AT1G07890.3 (ascorbate peroxidase 1) HSP 1 Score: 238.8 bits (608), Expect = 3.700e-63 Identity = 119/241 (49.38%), Postives = 167/241 (69.29%), Query Frame = 1
BLAST of Spo07616.1 vs. TAIR (Arabidopsis)
Match: AT1G77490.1 (thylakoidal ascorbate peroxidase) HSP 1 Score: 195.7 bits (496), Expect = 3.600e-50 Identity = 116/267 (43.45%), Postives = 158/267 (59.18%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07616.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07616.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07616.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07616.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
|