Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAGGTTATGACCTAGAGAGTTTATATAGTACTCTCTAGACAGATGCGGAAAAGCGAGATCTCGTGTTGGGGTGTTGCAGTAAGGGACTCACGAATTCATGATCCTTTTATACAATTCGATGCTTCTATACAATTATTTTAATGGAATTCGATGCTTCCACACAATTATTTTATTTTATTGCATTATATATTCTATTACTTGTACAAAATGTGGCACGTTTGAACATGAAATAAAAAATTTAAGCCTTATTTTTATATGAGCTAGCCTTGTATAAGTAAGACCACCACAAAGCCATATTTTATAATTCATTCCTAGCATTTCAATTTTCAATAATATAATACGTGGTACTCCATATTGAATATTGATTACCATGTCACACGCACAGTTGAAAGCAGAGCAGATTGTGGATGAAGAGTACTTGAAACAAATTGAAGGAGCTCGTAGACATCTTCATTGTCTTCTGCAAAACGATAAGCAGTTTGCTCCAATCTTGCTTCGCTTAGCGTACGTAATCTTCCTTTCACCCCTTAATTATATGTTTGTTCTTGTTAAGTTCTTGTGTTCTTTAATAATGCTCATTTTGGTTGAACATCAGAGTTTCTAATATCTAATTAATGTTACCTTAATTATGAATTGAAGAATTAACTCTTTGTTTATCTGACGATCTAACGTAAATATATAAGTTTTTCCTTTAATTAAATCAATCTATCAAACTCGAAACAACATAATTAGGCTCTTATTCTCTTAATTACTTGGTTGTTGGTGTTGTAGATTTCATGATGCGGGTACTTATGACGCGAAAACAAAGACAGGAGGTCCAAATGGTTCGATTAGGAATGAGTTGAGCAATCCTCCCAACAATGGTGTTAAAAATGCTATTGATTTTTGCGGTGAGCCAAACAAATACGTAGTACTACGTATTAATTAATTAAGCTTGTATAGTACGCGTAACGCGTGTGTGTATCTAACACAACTTAATTACGACTTTGTGGTGTCTCAGAACAAGTGAAGGTCAAGTACCCCAAGGTTACTTATGCTGACCTTTACCAGGTGACTTTCTTTAATTTTACTTCTTACTAGTACGTGTACGTGTACGTAGTTCTTGACGACTAATTAATATTTTTATTCATTGACAGCTAGCTGGTATGGTTGCAGTTGAAGTTACTGGAGGTCCGATTATCCCTTTTGTCCCCGGCCGTCCGGTAAATGTAGCACGTACATGTATATGTATCAACTTAATTAACTTTCAAATGAATTGTACCCTTATATATATATATTATATATGATTGTTTACAATAGGATGCCCCGAATGAACAAGACAGTGGAGCTCTTCCAAATCCCAATGGAGGTACATACATAAATAATATAGGATACTAAGGGTATACTCGTAATTGTACTACTGTACGATATTATTATATATATGAGTCCCAGGCACCCGTATTAGGGTATGCCGTATCATTATATTCACGATAAATAATAAATTAAACTCACCTACTAATTGTACAAATTAAGCTCATGGATTTGATAAATTAATGTCTTCTTTTCCATGTAGGATCCAATCATCTGAAAGATATATTTTACCGAATGGGCTTGAACAATAGGGATATTGTTGTTTTATCTGGAGCTCACACACTGGTAACCAACTTCTGATCTGTATAATCCTTATACCATGCCATTTTAATTTTATTGGATTACTTTATTATTGAAATTTATGTGAACTTAACTTACAGGGTCGAGCACACAAGGATAGGTCAGGTTTTGATGGTCCTTTCACCGAACAACCTTTGAAGTTCGACAATTCCTATTATGTGTAAGATTGTAGCTTTTCAACAATCCAGTTGTTAGTTTGTGTAAACATAGGAATTATTTACTTCCTTTTAATTTGTCTTAAAAATGTCTATCTTATTCGTTCTGTGATCAGAAACTTGAGGAAGCCTGACATTCCTGGACTGGTGAAATTCCCCTCGGATAAAGTTCTCGCTGAGGATCCTGATTTCCGTCGCTATGTTCAACTGTATGCTAAGGTAATTGTCATATGACAGACTCAACCAAAAGCTTAACCTGATGGTTGAAACCCAAGATTAGTTTTATACTCCACCGATCAGTAATGACATAATACATTTCATATTCGGCTATCCTAGTAGTGTGTACTACGAGTAATTAACATGATATGCTAGTATTCCCTTGCACAACCGGTTGTACATAAGAAATTTCCCTGAAACACTAACTAATTAATATGTTACGTCCTTATAGTTAAAACAGAAACTTTTGTATAACGGTTAGACCACTTTTTTGGTACTAACTAAACTAGTGTAAAACATAACTAAAAATAATAAAATCTTAACTAATAGAATAACAAAATAGTTAAATTTATGAGTCGAATAGTTTGTATCGTAAAAATTGGCAGTAGAAAATGATCAGGGCTCTAATTAATTAACTAAAATGGCATGTATATATGCAGGATGAGAAGGTGTTCTTCGCACACTATGCTGAGTCACACAAGAAGATGTCGGAGCTCGGGTTTCACCCACGTGCACCTTGCTCTTGCTCTGCTATGAAAGCTTGAAAGCCATGGCCGGCACCCTAGACTCACTGATATGTAACAGATGTTGCTGTTGTCTGTTACAATATACACTACTTAATTATACTTAATTATGAAACTACGTATAATGTACTCTACTGCATTATTAATGAGTGCTAATAAATGGGGAAATTTGTGCCCAAGATTCACTTACTGGAAATTGGTGCTATCCTATCCTCACCGTCATGTATTGGTGATCCATTACAATTATGTAAAACTATTTTGAGTGACAAATTTCTAAGTTTTCGAGCTTTATTATGTTCATGTTTCTGATGGACGTCTTTCT CTAGGTTATGACCTAGAGAGTTTATATAGTACTCTCTAGACAGATGCGGAAAAGCGAGATCTCGTGTTGGGGTGTTGCAGTAAGGGACTCACGAATTCATGATCCTTTTATACAATTCGATGCTTCTATACAATTATTTTAATGGAATTCGATGCTTCCACACAATTATTTTATTTTATTGCATTATATATTCTATTACTTGTACAAAATGTGGCACGTTTGAACATGAAATAAAAAATTTAAGCCTTATTTTTATATGAGCTAGCCTTGTATAAGTAAGACCACCACAAAGCCATATTTTATAATTCATTCCTAGCATTTCAATTTTCAATAATATAATACGTGGTACTCCATATTGAATATTGATTACCATGTCACACGCACAGTTGAAAGCAGAGCAGATTGTGGATGAAGAGTACTTGAAACAAATTGAAGGAGCTCGTAGACATCTTCATTGTCTTCTGCAAAACGATAAGCAGTTTGCTCCAATCTTGCTTCGCTTAGCATTTCATGATGCGGGTACTTATGACGCGAAAACAAAGACAGGAGGTCCAAATGGTTCGATTAGGAATGAGTTGAGCAATCCTCCCAACAATGGTGTTAAAAATGCTATTGATTTTTGCGAACAAGTGAAGGTCAAGTACCCCAAGGTTACTTATGCTGACCTTTACCAGCTAGCTGGTATGGTTGCAGTTGAAGTTACTGGAGGTCCGATTATCCCTTTTGTCCCCGGCCGTCCGGATGCCCCGAATGAACAAGACAGTGGAGCTCTTCCAAATCCCAATGGAGGATCCAATCATCTGAAAGATATATTTTACCGAATGGGCTTGAACAATAGGGATATTGTTGTTTTATCTGGAGCTCACACACTGGGTCGAGCACACAAGGATAGGTCAGGTTTTGATGGTCCTTTCACCGAACAACCTTTGAAGTTCGACAATTCCTATTATGTAAACTTGAGGAAGCCTGACATTCCTGGACTGGTGAAATTCCCCTCGGATAAAGTTCTCGCTGAGGATCCTGATTTCCGTCGCTATGTTCAACTGTATGCTAAGGATGAGAAGGTGTTCTTCGCACACTATGCTGAGTCACACAAGAAGATGTCGGAGCTCGGGTTTCACCCACGTGCACCTTGCTCTTGCTCTGCTATGAAAGCTTGAAAGCCATGGCCGGCACCCTAGACTCACTGATATGTAACAGATGTTGCTGTTGTCTGTTACAATATACACTACTTAATTATACTTAATTATGAAACTACGTATAATGTACTCTACTGCATTATTAATGAGTGCTAATAAATGGGGAAATTTGTGCCCAAGATTCACTTACTGGAAATTGGTGCTATCCTATCCTCACCGTCATGTATTGGTGATCCATTACAATTATGTAAAACTATTTTGAGTGACAAATTTCTAAGTTTTCGAGCTTTATTATGTTCATGTTTCTGATGGACGTCTTTCT ATGTCACACGCACAGTTGAAAGCAGAGCAGATTGTGGATGAAGAGTACTTGAAACAAATTGAAGGAGCTCGTAGACATCTTCATTGTCTTCTGCAAAACGATAAGCAGTTTGCTCCAATCTTGCTTCGCTTAGCATTTCATGATGCGGGTACTTATGACGCGAAAACAAAGACAGGAGGTCCAAATGGTTCGATTAGGAATGAGTTGAGCAATCCTCCCAACAATGGTGTTAAAAATGCTATTGATTTTTGCGAACAAGTGAAGGTCAAGTACCCCAAGGTTACTTATGCTGACCTTTACCAGCTAGCTGGTATGGTTGCAGTTGAAGTTACTGGAGGTCCGATTATCCCTTTTGTCCCCGGCCGTCCGGATGCCCCGAATGAACAAGACAGTGGAGCTCTTCCAAATCCCAATGGAGGATCCAATCATCTGAAAGATATATTTTACCGAATGGGCTTGAACAATAGGGATATTGTTGTTTTATCTGGAGCTCACACACTGGGTCGAGCACACAAGGATAGGTCAGGTTTTGATGGTCCTTTCACCGAACAACCTTTGAAGTTCGACAATTCCTATTATGTAAACTTGAGGAAGCCTGACATTCCTGGACTGGTGAAATTCCCCTCGGATAAAGTTCTCGCTGAGGATCCTGATTTCCGTCGCTATGTTCAACTGTATGCTAAGGATGAGAAGGTGTTCTTCGCACACTATGCTGAGTCACACAAGAAGATGTCGGAGCTCGGGTTTCACCCACGTGCACCTTGCTCTTGCTCTGCTATGAAAGCTTGA MSHAQLKAEQIVDEEYLKQIEGARRHLHCLLQNDKQFAPILLRLAFHDAGTYDAKTKTGGPNGSIRNELSNPPNNGVKNAIDFCEQVKVKYPKVTYADLYQLAGMVAVEVTGGPIIPFVPGRPDAPNEQDSGALPNPNGGSNHLKDIFYRMGLNNRDIVVLSGAHTLGRAHKDRSGFDGPFTEQPLKFDNSYYVNLRKPDIPGLVKFPSDKVLAEDPDFRRYVQLYAKDEKVFFAHYAESHKKMSELGFHPRAPCSCSAMKA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07617.1 vs. NCBI nr
Match: gi|902219360|gb|KNA18298.1| (hypothetical protein SOVF_072210 [Spinacia oleracea]) HSP 1 Score: 539.7 bits (1389), Expect = 2.900e-150 Identity = 261/262 (99.62%), Postives = 261/262 (99.62%), Query Frame = 1
BLAST of Spo07617.1 vs. NCBI nr
Match: gi|902239239|gb|KNA25519.1| (hypothetical protein SOVF_006050 [Spinacia oleracea]) HSP 1 Score: 421.0 bits (1081), Expect = 1.500e-114 Identity = 202/246 (82.11%), Postives = 219/246 (89.02%), Query Frame = 1
BLAST of Spo07617.1 vs. NCBI nr
Match: gi|731337651|ref|XP_010679902.1| (PREDICTED: L-ascorbate peroxidase 3, peroxisomal-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 420.6 bits (1080), Expect = 2.000e-114 Identity = 204/251 (81.27%), Postives = 222/251 (88.45%), Query Frame = 1
BLAST of Spo07617.1 vs. NCBI nr
Match: gi|731337647|ref|XP_010679900.1| (PREDICTED: L-ascorbate peroxidase 3, peroxisomal-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 419.9 bits (1078), Expect = 3.400e-114 Identity = 199/244 (81.56%), Postives = 223/244 (91.39%), Query Frame = 1
BLAST of Spo07617.1 vs. NCBI nr
Match: gi|902219359|gb|KNA18297.1| (hypothetical protein SOVF_072200 [Spinacia oleracea]) HSP 1 Score: 413.7 bits (1062), Expect = 2.400e-112 Identity = 196/246 (79.67%), Postives = 220/246 (89.43%), Query Frame = 1
BLAST of Spo07617.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFM8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072210 PE=3 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 2.000e-150 Identity = 261/262 (99.62%), Postives = 261/262 (99.62%), Query Frame = 1
BLAST of Spo07617.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2V5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006050 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 1.100e-114 Identity = 202/246 (82.11%), Postives = 219/246 (89.02%), Query Frame = 1
BLAST of Spo07617.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCA7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130390 PE=3 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 1.400e-114 Identity = 204/251 (81.27%), Postives = 222/251 (88.45%), Query Frame = 1
BLAST of Spo07617.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCA4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130340 PE=3 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 2.400e-114 Identity = 199/244 (81.56%), Postives = 223/244 (91.39%), Query Frame = 1
BLAST of Spo07617.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHH8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072200 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 1.700e-112 Identity = 196/246 (79.67%), Postives = 220/246 (89.43%), Query Frame = 1
BLAST of Spo07617.1 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 6.000e-87 Identity = 161/248 (64.92%), Postives = 194/248 (78.23%), Query Frame = 1
BLAST of Spo07617.1 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=1 SV=2) HSP 1 Score: 312.0 bits (798), Expect = 6.200e-84 Identity = 154/242 (63.64%), Postives = 190/242 (78.51%), Query Frame = 1
BLAST of Spo07617.1 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 6.900e-83 Identity = 153/248 (61.69%), Postives = 189/248 (76.21%), Query Frame = 1
BLAST of Spo07617.1 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 9.000e-83 Identity = 151/248 (60.89%), Postives = 189/248 (76.21%), Query Frame = 1
BLAST of Spo07617.1 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 2.000e-82 Identity = 150/248 (60.48%), Postives = 189/248 (76.21%), Query Frame = 1
BLAST of Spo07617.1 vs. TAIR (Arabidopsis)
Match: AT4G35000.1 (ascorbate peroxidase 3) HSP 1 Score: 322.0 bits (824), Expect = 3.400e-88 Identity = 161/248 (64.92%), Postives = 194/248 (78.23%), Query Frame = 1
BLAST of Spo07617.1 vs. TAIR (Arabidopsis)
Match: AT4G35970.1 (ascorbate peroxidase 5) HSP 1 Score: 312.0 bits (798), Expect = 3.500e-85 Identity = 154/242 (63.64%), Postives = 190/242 (78.51%), Query Frame = 1
BLAST of Spo07617.1 vs. TAIR (Arabidopsis)
Match: AT3G09640.1 (ascorbate peroxidase 2) HSP 1 Score: 250.0 bits (637), Expect = 1.600e-66 Identity = 126/240 (52.50%), Postives = 166/240 (69.17%), Query Frame = 1
BLAST of Spo07617.1 vs. TAIR (Arabidopsis)
Match: AT1G07890.3 (ascorbate peroxidase 1) HSP 1 Score: 243.4 bits (620), Expect = 1.500e-64 Identity = 123/241 (51.04%), Postives = 169/241 (70.12%), Query Frame = 1
BLAST of Spo07617.1 vs. TAIR (Arabidopsis)
Match: AT1G77490.1 (thylakoidal ascorbate peroxidase) HSP 1 Score: 189.9 bits (481), Expect = 2.000e-48 Identity = 111/257 (43.19%), Postives = 154/257 (59.92%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07617.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07617.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07617.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07617.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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