Spo07622 (gene)

Overview
NameSpo07622
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 43490640 .. 43493566 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAACGATTTTGTCTAATTTACTTGCTAGTTTGTGACATGTTATAAACCTACGGAATGGAGTAGCCGATACTCCAATTGATTGTAAAACATGAAAGTAACAGAGCAATCGATTCACACTCTATTGAAAAACTGCAATTCAATCTCTCACCTCAAACAAATTCACGCCCAAACACTACGCCACAATCTCCATGAGCATCAACATTCCATAACTTCCTCCATTGTTGATGTCTACACTTTTCTCTCTCCTCGCCACACCCATCTCCTCTTCACTTCTCTCGCTCACCATGCCACTGTATTTCTCTTCAATCACTCAATCAGAGCCTTTTCTAAAACCCCATTTCTCTGCCATGAATCCTTGCATTTGTACCTTCAAATGGTGCGACATAATTTTAAACCCGACAATTACACTTACCCTTTTGTACTTAACTCGTGTGCTGCTCTTTGTGACCTTAATAATGGTGCTGAGGTTCATGGGCGTGTTTTGAAATCTGGGTTTTGTTCAATTGTTGAAGTCTTTAATGCTTTGATTGATATGTATGGGAAATGTGGGAAGTTGAGTTGTGCCCGCCAAGTGTTCGACGAAATGCCTCACAGAGATGTAGTGTCTTATAATGCTGTTCTTGGTGCATATGCTAGGGGTGGGGAAGATATGAGGGATGCCCAGGTTGTTTTTGATGGAATGCGTGTTAGGAATTTGATTACTTGGAATGCTATGGTTGTGGGGTATGTGAATGGTGATGATTTGGATTCTGCTCGGGCAACGTTTGATAAGATGTTAGATAAAAATGTTGTTACTTGGACTACAATGTTAGTTGGATATACTAAGAAGAAGATTATGGGTGTGGCTAGGATCCTTTTTGAAGCTATGCCTGAGAAGACTTTAGTTTGTTGGACTGCTATGATCTCTGGGTATGCTCAAAATGGACAACCGAATGAAGCATTGGCTTATTTTCGTAGTATGCGAAAAGCACATGTTAAGCCTGATGCTTTTGCTATGACTGCTGTTATATCAGCCTTGGCTCAGTTAGGGCGCCCTGATTTGGCCAATTGGATCATGACTTTAATGGATCAAGAAGGCATTGAGCGAAACGAAAAGGTCCTTACTTCCCTAGTTGACATGCATGCTAAATGTGGGAATATTGAAGAAGCGTGTCGGTTGTTTGAGGAGATTCGTCAACCAGATGTATATCCTTATAGTGCACTGATAACAGGCCTTGCTTCGCACGGCCATGGTATCCGAGCCCTTGATGTTTTTCACAAAATGCTGATGGAAAAGGTAGAACCTGATTATGTAACTTTTGTTGGTGTATTGAATGCGTGTAGCCATACAGGACTTGTTGAAGATGGTTTAGCCTATTGGGAAAGCATGATAAGTGATTACAAGATTGAGCCAGATGCAGATCATTATGCTTGCATAATTGATATGCTTGGACGAGCTGGGAGACTTGAGCAAGCATATAAGATGCTAAAGAGTATGCCAATGGGTCCTCGCCCTGGAGCTTTAGGCGCCCTGCTTGCTGCCTGTCGAACTTATAGCAATGTTGATATTGCAGAACTTGTTGCCCAGGAACTGTTTATATTAGAACCTCATAATACTGGTAACTATATGCTTCTCTCTGGTATCTATGCTGAAAGAGAGCAATGGGATGAGGCAGAAAGGGTTCGAAAATCTATGAGGGAAAAGATCTCCACTAAACTACCTGGTTGTAGTTGGGTTTAGTCTAACAGATACAGCAAAGGTTATGGTTGCCCAGAGAAAAGAGAGCACTATGTGGATGAGCTAAAAAGGGAAAACGGGCTATGTAACCATGGTAACTGCAATTGTGAAGTACGTATATAATAAGGATACATATACAATTAAAGTCAGCCATCCTTTTGATTACAATACACCTTCCTTTTCATTACAAAAAGGATGTCTTTACGTTGGAATTAGCAGATTTATTACCTTGCTGACTTATGTCAACGGTCTCTCCATCAATTCACTATGTTTTAACCAGTACCCTAACATGCTCGAATCAGAATAACAGCGCCCCTAGATTGATCAAGGTATCATGGTTGCTGGCTTGTACATTTGAAACAGCACAAAAATATTTCAAGTCAACGTCTCATGAAGCTGATCTTGAGAGTGAGACTGCCAGATGTGCCTGAGCTGAGGTTTGTTTCTCTTTAATTTGCTAAACTTTTCTGTCATTTATCTTTTGTTGTATTCAACATCAATTTTTTGCATTGAAGGAATTCAAACTAATCCACATTGGGTATAAACGAGTTCAATGCTCTTTGTTGATGTACTTGAAAGCTTTAACTTTGTTTTTTGCTTTCTTATTCCGTACTTTTGTCCAGTAACTTAGGTGTGTTAGTTTACCTTAACTCTGCTACGTACACATAACACATCTGTCATGCAGCCATTAGATTGGACCATTTGAAATATTTTCAAATATACCACGATGGGTAGGTGGATAACAACTTTAGCAATATTAGAAACACTTGATAGTCTGTTGTAACTTTTCACTTCTATTACAAGAACTGTTTTCGACTAATAAGACCTTAATCCGGGAGCAGAAATTATACACACACTTCATTTAATCTTCTATCTGCTTACTTATTATTTGTAGGCACCATGGAGCACAAGGGGAAATGGAAATCGCCACATTCTCATTACTTGTCTATTGAACCTCTATTTCAGGGGAAAGAAACTGGGTTGGGAGCCACTGCCACCTCAACTCTATTGCACATTCCCATTCACTCCTTATCTGTTGTGTGCATTCACTGTTTTTCAACTTATCCTGCTTACTTGTCTGTTCTCCAGTATTTCTTACTTCATGTTTCTCTTGGGAAATATCCTCCCTTTCTCTCCCACAGCCGTGCCATCTTTCTGGATTCGCACTTACACATATCTTTTGCCTACAAATGCTCTCTTTCAGAGTGA

mRNA sequence

TTAACGATTTTGTCTAATTTACTTGCTAGTTTGTGACATGTTATAAACCTACGGAATGGAGTAGCCGATACTCCAATTGATTGTAAAACATGAAAGTAACAGAGCAATCGATTCACACTCTATTGAAAAACTGCAATTCAATCTCTCACCTCAAACAAATTCACGCCCAAACACTACGCCACAATCTCCATGAGCATCAACATTCCATAACTTCCTCCATTGTTGATGTCTACACTTTTCTCTCTCCTCGCCACACCCATCTCCTCTTCACTTCTCTCGCTCACCATGCCACTGTATTTCTCTTCAATCACTCAATCAGAGCCTTTTCTAAAACCCCATTTCTCTGCCATGAATCCTTGCATTTGTACCTTCAAATGGTGCGACATAATTTTAAACCCGACAATTACACTTACCCTTTTGTACTTAACTCGTGTGCTGCTCTTTGTGACCTTAATAATGGTGCTGAGGTTCATGGGCGTGTTTTGAAATCTGGGTTTTGTTCAATTGTTGAAGTCTTTAATGCTTTGATTGATATGTATGGGAAATGTGGGAAGTTGAGTTGTGCCCGCCAAGTGTTCGACGAAATGCCTCACAGAGATGTAGTGTCTTATAATGCTGTTCTTGGTGCATATGCTAGGGGTGGGGAAGATATGAGGGATGCCCAGGTTGTTTTTGATGGAATGCGTGTTAGGAATTTGATTACTTGGAATGCTATGGTTGTGGGGTATGTGAATGGTGATGATTTGGATTCTGCTCGGGCAACGTTTGATAAGATGTTAGATAAAAATGTTGTTACTTGGACTACAATGTTAGTTGGATATACTAAGAAGAAGATTATGGGTGTGGCTAGGATCCTTTTTGAAGCTATGCCTGAGAAGACTTTAGTTTGTTGGACTGCTATGATCTCTGGGTATGCTCAAAATGGACAACCGAATGAAGCATTGGCTTATTTTCGTAGTATGCGAAAAGCACATGTTAAGCCTGATGCTTTTGCTATGACTGCTGTTATATCAGCCTTGGCTCAGTTAGGGCGCCCTGATTTGGCCAATTGGATCATGACTTTAATGGATCAAGAAGGCATTGAGCGAAACGAAAAGGTCCTTACTTCCCTAGTTGACATGCATGCTAAATGTGGGAATATTGAAGAAGCGTGTCGGTTGTTTGAGGAGATTCGTCAACCAGATGTATATCCTTATAGTGCACTGATAACAGGCCTTGCTTCGCACGGCCATGGTATCCGAGCCCTTGATGTTTTTCACAAAATGCTGATGGAAAAGGTAGAACCTGATTATGTAACTTTTGTTGGTGTATTGAATGCGTGTAGCCATACAGGACTTGTTGAAGATGGTTTAGCCTATTGGGAAAGCATGATAAGTGATTACAAGATTGAGCCAGATGCAGATCATTATGCTTGCATAATTGATATGCTTGGACGAGCTGGGAGACTTGAGCAAGCATATAAGATGCTAAAGAGTATGCCAATGGGTCCTCGCCCTGGAGCTTTAGGCGCCCTGCTTGCTGCCTGTCGAACTTATAGCAATGTTGATATTGCAGAACTTGTTGCCCAGGAACTGTTTATATTAGAACCTCATAATACTGGTAACTATATGCTTCTCTCTGGTATCTATGCTGAAAGAGAGCAATGGGATGAGGCAGAAAGGGTTCGAAAATCTATGAGGGAAAAGATCTCCACTAAACTACCTGGTTGTAGTTGGGTTTAGTCTAACAGATACAGCAAAGGTTATGGTTGCCCAGAGAAAAGAGAGCACTATGTGGATGAGCTAAAAAGGGAAAACGGGCTATGTAACCATGGTAACTGCAATTGTGAAGTACGTATATAATAAGGATACATATACAATTAAAGTCAGCCATCCTTTTGATTACAATACACCTTCCTTTTCATTACAAAAAGGATGTCTTTACGTTGGAATTAGCAGATTTATTACCTTGCTGACTTATGTCAACGGTCTCTCCATCAATTCACTATGTTTTAACCAGTACCCTAACATGCTCGAATCAGAATAACAGCGCCCCTAGATTGATCAAGGTATCATGGTTGCTGGCTTGTACATTTGAAACAGCACAAAAATATTTCAAGTCAACGTCTCATGAAGCTGATCTTGAGAGTGAGACTGCCAGATGTGCCTGAGCTGAGCAGAAATTATACACACACTTCATTTAATCTTCTATCTGCTTACTTATTATTTGTAGGCACCATGGAGCACAAGGGGAAATGGAAATCGCCACATTCTCATTACTTGTCTATTGAACCTCTATTTCAGGGGAAAGAAACTGGGTTGGGAGCCACTGCCACCTCAACTCTATTGCACATTCCCATTCACTCCTTATCTGTTGTGTGCATTCACTGTTTTTCAACTTATCCTGCTTACTTGTCTGTTCTCCAGTATTTCTTACTTCATGTTTCTCTTGGGAAATATCCTCCCTTTCTCTCCCACAGCCGTGCCATCTTTCTGGATTCGCACTTACACATATCTTTTGCCTACAAATGCTCTCTTTCAGAGTGA

Coding sequence (CDS)

ATGAAGCTGATCTTGAGAGTGAGACTGCCAGATGTGCCTGAGCTGAGCAGAAATTATACACACACTTCATTTAATCTTCTATCTGCTTACTTATTATTTGTAGGCACCATGGAGCACAAGGGGAAATGGAAATCGCCACATTCTCATTACTTGTCTATTGAACCTCTATTTCAGGGGAAAGAAACTGGGTTGGGAGCCACTGCCACCTCAACTCTATTGCACATTCCCATTCACTCCTTATCTGTTGTGTGCATTCACTGTTTTTCAACTTATCCTGCTTACTTGTCTGTTCTCCAGTATTTCTTACTTCATGTTTCTCTTGGGAAATATCCTCCCTTTCTCTCCCACAGCCGTGCCATCTTTCTGGATTCGCACTTACACATATCTTTTGCCTACAAATGCTCTCTTTCAGAGTGA

Protein sequence

MKLILRVRLPDVPELSRNYTHTSFNLLSAYLLFVGTMEHKGKWKSPHSHYLSIEPLFQGKETGLGATATSTLLHIPIHSLSVVCIHCFSTYPAYLSVLQYFLLHVSLGKYPPFLSHSRAIFLDSHLHISFAYKCSLSE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07622.1Spo07622.1mRNA


Homology
[Close]
BLAST of Spo07622.1 vs. NCBI nr
Match: gi|902169098|gb|KNA07609.1| (hypothetical protein SOVF_170340 [Spinacia oleracea])

HSP 1 Score: 213.0 bits (541), Expect = 3.300e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

		  

Query: 37  MEHKGKWKSPHSHYLSIEPLFQGKETGLGATATSTLLHIPIHSLSVVCIHCFSTYPAYLS 96
           MEHKGKWKSPHSHYLSIEPLFQGKETGLGATATSTLLHIPIHSLSVVCIHCFSTYPAYLS
Sbjct: 1   MEHKGKWKSPHSHYLSIEPLFQGKETGLGATATSTLLHIPIHSLSVVCIHCFSTYPAYLS 60

Query: 97  VLQYFLLHVSLGKYPPFLSHSRAIFLDSHLHISFAYKCSLSE 139
           VLQYFLLHVSLGKYPPFLSHSRAIFLDSHLHISFAYKCSLSE
Sbjct: 61  VLQYFLLHVSLGKYPPFLSHSRAIFLDSHLHISFAYKCSLSE 102
[Close]
BLAST of Spo07622.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QK56_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_170340 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.300e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

		  

Query: 37  MEHKGKWKSPHSHYLSIEPLFQGKETGLGATATSTLLHIPIHSLSVVCIHCFSTYPAYLS 96
           MEHKGKWKSPHSHYLSIEPLFQGKETGLGATATSTLLHIPIHSLSVVCIHCFSTYPAYLS
Sbjct: 1   MEHKGKWKSPHSHYLSIEPLFQGKETGLGATATSTLLHIPIHSLSVVCIHCFSTYPAYLS 60

Query: 97  VLQYFLLHVSLGKYPPFLSHSRAIFLDSHLHISFAYKCSLSE 139
           VLQYFLLHVSLGKYPPFLSHSRAIFLDSHLHISFAYKCSLSE
Sbjct: 61  VLQYFLLHVSLGKYPPFLSHSRAIFLDSHLHISFAYKCSLSE 102
The following BLAST results are available for this feature:
BLAST of Spo07622.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1
Match NameE-valueIdentityDescription
gi|902169098|gb|KNA07609.1|3.3e-52100.hypothetical protein SOVF_1703... [more]
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BLAST of Spo07622.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K9QK56_SPIOL2.3e-52100.Uncharacterized protein OS=Spi... [more]
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BLAST of Spo07622.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07622.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0051555 flavonol biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006629 lipid metabolic process
biological_process GO:0010048 vernalization response
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0043531 ADP binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0045431 flavonol synthase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008081 phosphoric diester hydrolase activity
RNA-Seq Expression