Spo07649 (gene)

Overview
NameSpo07649
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 43962888 .. 43964974 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAATTTGTATTTGGAGATGAATCAGATGGAAAGATTGAACTCACCATTCAGAATCGTAGCTTCTCAACAAAAAAATTGGTATATCTGTGTCGCATCGGTAAGAGATAATATAAATTTATTAAAGTCTCGTTTGATATCAGTACCAATTTTTGTTTTTGGGTTTGATAGTTATATGATTTATATTGCAGAATCCAAAAATAATCATACTTGTAGTAATCATGTTGATTTTGGAAAATGACAACAAAAACTGGAAACTAATTAAGGGTCCGTTCGGTATCGTTTTTTGTTTCTAGTTTTATGTTTTTAACAAAACTAAAAACCAAAATATGAAAATCACAAAAAATAGTTTCCAGTTTTTTTGTTGCCAGTTTCAAAATTACCATAATTACTATAAGTAAGATTATCTTTTAGTTCATTGTTCAATCTAAAAACCAAAAATAGGAAGCTGATAGTGATAACTTTTGTGATTTTTATATTTTGATTTTTAGTTTTGTAAAAATAGAAAATTGGAAAAACAAAAAAAGATATTGAACGGGCCTTAAGTTTGACTTAAATTTAATATTTTTTCTCTAAAAACTATCTTTTACCTTCATATACTTTTATGTTTTTTCAGAAGGAGAATCCAATGCTGCCTTATCCAAGCCAGATCCTTGTAACCAAATATTTCTCCCCAAACGATAACAGGTGATAATGAAAAGGAAATTTTGTCAGAAAGGACCTTTTATAATCCAAAAATTGTGACAAAGGACCTTTTAAAAAAAAAGTTGTGAGACATGACCCAAACCAGATTTTTTGTTGTGAATAGGGACCAAAACCCATTTTCCGGCAGTCAAACTCAATTCTCCGGCGTTGACCGGCGCGTGCACTGCACGTGACCCTTCAAAAATGGATTCCCCCACCCCCAAATTCCCCCCTAACTACCTAAAGAAAACCTTAAAAAACCCTCTATTTCTCACTCCTCATTGCTTCTCCTTCCTCAACAGTTCGATAACACCACTACATTCATCCTGCAAAAACATGAAAAGCTACCTAAAAAAACCTTCACCTGAATATTCTATAAGCACAAGAGAATTAAGTGTCGTATATTTTAACTTTTATCGATGCACTTATGTAGTTCCTTCATCTCCTTGATCTCTCACAGTGGTGAGAAGCCTGCGGGCTGCTGTATTGGTCTCTTGCCTCTGGATTCTTACAACAGCAGCATGAACTAGTTCATCATGTTGGCCCTGCTTGTGGGATTTCAAGGTAAGTACCGAGAGAGCATATTCATCTGGGGTTTCCTTTTTACCATTACCAATTTTCCTAATTTGAATCCTCTTAAAAGAATGTGACCCGTAGAGTTGATGAATTTGCGCAGCAACTTCGGTGGCATTGCAAACAGCTGTTAACGAGTCCTTTAATGAAATTCCATCAAGATTAACTCCATTGTAGACCGGGGTAGCAATCCGTTATGAGGCCGTTAATACAAAATGCCCTTCCAGGTGGCTCTAATTTAACTTATGAACCCTAATTTCGACAGTTCAGAAATTGGAGGAATTGGATCAAACAAATTAGGGCTTTTACTCTTACCTAGTACGAATTACAACGAAAATCAAGGGGGAAGTTATGAATTATTATTTTTTTAACAGGAGGCAACGAATTGATGAAGAAGCTTGGAGCAGGTCATGGAAACAGAGCAACGACGAGAGAGAAAAGGGGAATTTTTTTGGTTAAGGTTTTCTTTAGGTAGTTAAAGGGGAAATTGGAGGGAAAAAGTATGTTTTTTAAGGGTCACGTGCAGTGCACGCGCCGGTCAACGCCGGAGAATTGAGTTGACTGCCGGAAAATGGGTTATGGTCCCTATTCACAATAAAAAATCTAATTTTGGTCCTATCTCACAACTTTTTTTTTAAAAGGTCCTTTGTCACAATTTTTGGAATATAAAAGGTCCTTTATGACAAAATTTCCTAATGAAAATTTATGAAGAAAAATATATGATTTTAAGTACATTAACAAAAGTTTGTTACCTAAGCCGCTTCTCCCCTCTCTCCCTATTTTCTCTCTCTTTTTAAGGTTTACAAAACTAGGGTTTTCTAGGGCGGA

mRNA sequence

ATGAAGAATTTGTATTTGGAGATGAATCAGATGGAAAGATTGAACTCACCATTCAGAATCGTAGCTTCTCAACAAAAAAATTGGTATATCTGTGTCGCATCGAAGGAGAATCCAATGCTGCCTTATCCAAGCCAGATCCTTGTAACCAAATATTTCTCCCCAAACGATAACAGTGGTGAGAAGCCTGCGGGCTGCTGTATTGGTCTCTTGCCTCTGGATTCTTACAACAGCAGCATGAACTAGTTCATCATGTTGGCCCTGCTTGTGGGATTTCAAGGTAAGTACCGAGAGAGCATATTCATCTGGGGTTTCCTTTTTACCATTACCAATTTTCCTAATTTGAATCCTCTTAAAAGAATGTGACCCGTAGAGTTGATGAATTTGCGCAGCAACTTCGGTGGCATTGCAAACAGCTGTTAACGAGTCCTTTAATGAAATTCCATCAAGATTAACTCCATTGTAGACCGGGGTAGCAATCCGTTATGAGGCCGTTAATACAAAATGCCCTTCCAGGTGGCTCTAATTTAACTTATGAACCCTAATTTCGACAGTTCAGAAATTGGAGGAATTGGATCAAACAAATTAGGGCTTTTACTCTTACCTAGTACGAATTACAACGAAAATCAAGGGGGAAGTTATGAATTATTATTTTTTTAACAGGAGGCAACGAATTGATGAAGAAGCTTGGAGCAGGTCATGGAAACAGAGCAACGACGAGAGAGAAAAGGGGAATTTTTTTGGTTAAGGTTTTCTTTAGGTAGTTAAAGGGGAAATTGGAGGGAAAAAGTATGTTTTTTAAGGGTCACGTGCAGTGCACGCGCCGGTCAACGCCGGAGAATTGAGTTGACTGCCGGAAAATGGGTTATGGTCCCTATTCACAATAAAAAATCTAATTTTGGTCCTATCTCACAACTTTTTTTTTAAAAGGTCCTTTGTCACAATTTTTGGAATATAAAAGGTCCTTTATGACAAAATTTCCTAATGAAAATTTATGAAGAAAAATATATGATTTTAAGTACATTAACAAAAGTTTGTTACCTAAGCCGCTTCTCCCCTCTCTCCCTATTTTCTCTCTCTTTTTAAGGTTTACAAAACTAGGGTTTTCTAGGGCGGA

Coding sequence (CDS)

ATGAAGAATTTGTATTTGGAGATGAATCAGATGGAAAGATTGAACTCACCATTCAGAATCGTAGCTTCTCAACAAAAAAATTGGTATATCTGTGTCGCATCGAAGGAGAATCCAATGCTGCCTTATCCAAGCCAGATCCTTGTAACCAAATATTTCTCCCCAAACGATAACAGTGGTGAGAAGCCTGCGGGCTGCTGTATTGGTCTCTTGCCTCTGGATTCTTACAACAGCAGCATGAACTAG

Protein sequence

MKNLYLEMNQMERLNSPFRIVASQQKNWYICVASKENPMLPYPSQILVTKYFSPNDNSGEKPAGCCIGLLPLDSYNSSMN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07649.1Spo07649.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo07649.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07649.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07649.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07649.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0009942 longitudinal axis specification
biological_process GO:0005992 trehalose biosynthetic process
biological_process GO:0009846 pollen germination
biological_process GO:0006486 protein glycosylation
biological_process GO:0097503 sialylation
biological_process GO:0048653 anther development
biological_process GO:0048508 embryonic meristem development
biological_process GO:0009945 radial axis specification
biological_process GO:0005982 starch metabolic process
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0009860 pollen tube growth
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0007155 cell adhesion
biological_process GO:0007020 microtubule nucleation
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0006855 drug transmembrane transport
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005768 endosome
cellular_component GO:0005773 vacuole
cellular_component GO:0005886 plasma membrane
molecular_function GO:0046872 metal ion binding
molecular_function GO:0019003 GDP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016597 amino acid binding
molecular_function GO:0015297 antiporter activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008373 sialyltransferase activity
molecular_function GO:0008253 5'-nucleotidase activity
molecular_function GO:0004805 trehalose-phosphatase activity
molecular_function GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
molecular_function GO:0005525 GTP binding
RNA-Seq Expression