Spo07739 (gene)

Overview
NameSpo07739
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01602 : 82343 .. 86016 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAACATTCGGTTGGAGATAGTAATGGTGCAAGTCTATTGCTTTGGCTTTGTGCCTTCGTGTATAGTTGTAGAAGCTAATTACAGGTTTTTGTTTCGGGAAGAGGAAGGGGTGATGGACTGATGGGTTTAATCTCTGAATGCCAGACATTAATATTGGCATATGTTTCCTATACTTGCAACGTAAACTATCCGTGACTAAGATTATTCAAGGCATGAATTTATAATACTATGGCTTTGTGTTGAGAATGGTATACGGAGTACCTTTTTGTTAACGTAAATTGTGACTAAATGTGAACTATGGGGAGACTTGTGAACTTGTGGAAGAAGGAAATGCAGCTCCATGTTCATCTAAAGCAGTGTTTATTTGCAGAAGTCCTAGTTGATTAAGAAAAATGTTGTGGATAATTTTTGGCTATATAATGTTTGTTTGGATCTTTTACTCTGCATCTTTACCCAGTGGGTTAATGCTACATTTTGAGGTTGACATATATGTTATACATCTAACAGTCTACTTGGGAGTTGTGAGTTAAATTTTACGTTGATTGAGTTTTGTTCTTGTAAATGCTTATCTACTTTTTCATTGAAGTATTATACTTGTATATCTTTCTACAACGAGTAATTTAGTTTATTATGCCGGCTAAACATAAGATAGCTGCTTAGATTATTTGGAGGATCTAAAAAATGGTTGAAAAAATCACTGCACTAAAACGTTATGTGACGTCAAATTACCTGTACGGATTGGATGAAGGTAGATGGTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTAATGTTGAAGTAGGTAGCTAATTGATGGGCAGTGTCACTGTGTGATCAGTAATTCATTAATTCTATTTGTTCTTAGTTTTTGGGGTTTCAGCTTTAATTTGCTGATCTAGAAACTTGATCGCTCATGGACTTGAGCTGACAGTAGGATCAATGGAAGAATTATATGGCAGAAGAGCACTCAATATACGAAAATTTGATCTCCTCGGTTCTCAAGGTATGTATATCTATGTTTTTAAAGACCAAGGTATAGGGTATAGCTACTGTAAAGCTAGGAATAATCGACTTGGAAAGCATTTGTTTGAATATGTTAATTATAAATTCCATTTCTGCATTTCATTTAGTTGTTGTCATCTAATCATGCAACCCTATTTGGTGTCTAATGTGAATCAGTGTTCTTATTTTCTCCTCTATATGCAAGTAGCGAGCCAATAATTTATTAGGTTTTTACTCCATTATCTGTAGAAAGGTTTTTGAATTTTTGCACTTCATAATCTACAATACTCACTGACTTATACATATAGGCCTGTAAATTACAATCACGACACTTACTTCATTATCTAAAGTTTTGAGGTTCTTGTTGAGGGGTATAGCTGAGGTTGGAAAACCTATCCTTCAACCGTCCTTAGACATCAGTATATCACATCACAAATAGAGGGCTAAGTTCCTCAAATACCGAACATTTCTTTCACGTCATGTAGATTGCGGACTGCAATGTTATCATCTTTCCGGACAACTATCTGCTACATTCTTTTGTTAACAAGAATGTGTAAGTAGCGGAGAAACATCTTAAATCTTAAGTATATTTTAACGGAAGTAGGTCTGTGGTAATTATCTATATCTGTTTTGATTTTTTTTTTTTTTTTGGTTTTGACAGTCTTAAAGGGTAAAAGTCAAGTTCATTGAGATTGAATCATGCTTTTATGGTAAGCAATTTCTTGTTTCACATTGGTGATATTTGTTACCTTCACATTCACACCTCAAAGGAATTTCAGAAATGGAAGCATATCATCTTCTGATTTTTTCAAAAATAATATTCCGTATTGTGTTTTTAAATTTTGTTTTTTATGTAATCAATGGGGTGCTTAAAAAAATTTAACCTTTCACATGTAAAATACTATCTGTGTCAGTGTCAGCATGATGTGGCAATAACAATTGAAAACCCTATATAAAGAGGATCACACATCTCTTAATCAGTGTGCTTCTCTCTCTCCCTCTCTATCTATCTCTCTTTTTCTTTGGTTTTCTTTGTTATTGTTCTTCAGAGTAGCAAGTTAGCATGAAGAAGAAAAGAAAGAAGAGAGCTATGCTCCAACATATATCATATTGCTTCAGCAATTCACCAAAATAGTCCCTATCGTAATGGAGGTATACTTTCCAACTACTCAATTCTGTTCAATTTTTTACGTTTGTCATATTATTTTTTTTTGCTTGTGCTTGCATTTTAACATTATGATGATTGATGAATGCCTACATTTGCTGGTTATCTGCATTGTATTTGGTTACTGTACAAATTTGACATAGGAAATGAGATATTTTCTCCATAAGTCTAATTTCTGTACGAGTTTTTCTGACATTTTTTCACCCTCAGATTCACAGATTATCAATTGTTTCCTACCACCTACGCTTAACTCTAAGTGGCCGGTTCATCTTACCACGATGTTTTTTTTTCCCTGTACGTTTGTCATTTTTTTTTTGCGTGTGCTTGCATTTTAACATTATGATTATTGATGAATGCCTACATTTGTTGGTTTTCTGCGTTGTATTTGTTTACTGTACAAATTCAACCATACAATTTTGACATATGAAGTGAGATATTTTTCTCCATAAGTCTAATTTCTGAATTCTGTATGAGTTTTTCTGACATTTCTTCACCCTCAGATTCACGGATTATCAATGGTTTCATCTTACCATGATATTGTTTTTTTCCTGCAGATGTTATTCAGGGAGACGAACTCTTTGTCACGTGTTTTAGATCTCAACAATGTGCTAATCACCTGATTCTTCTTCAAAGTAATTCCTCATAAATGCTCAACATTGCTGGTGTTGCGTTTGGAACTTGTGTATTTTATATCTTTTTTACATAAGGGAAGCCAAAATGCCTTCACCGTTTCGGATGGAGTAATTCTGTAGAGGCCTGATCACTGCGATTGCTCAAGAACAAGATTAAGAAAAGAAATGAGCAAAGGATGTTGATAATAATGAAGAATTAAGTGATGATCAAGAATGTTAAGAGTTATGGTATATCTAGGGTTCTAGCAGAGTTGTGTTAGTTTGGGAATCTAATAGAGTCCTAAACCTAATTTCCTATAATAACACAACTCTAGTTTCCTAAACATACTAGAACCTTAGATATACCATAACTCTAACAAAGAAGAAGTGTGAGGATGTGATTAGGCCGTTGTTTGAGTCTGATGGTGAACAAGATGATTTGTTCTGAGGCATCAAATGATGAGGTTTTTGAGGGTCAAAACTCAAAAGCAATTGTGGGTTTTTGAGGGTTCGCGAAATAGGGAAGTTCTGCCTAAAGGTGAGATTATTTTCGAACAATTGAAGACTGTTTTATGAAGATCAAACAAATGTACGACTTAAATAATTATATCTTCCTATATGTATATTTATTTACTTTTTTATTAAGGAAATGCCTTCACCATTTCGGATCTAAACAATTTTCGTTCTTATGGATGAAATTCAATGCTTCATGATAAAAAGGAACTTTGTAGTACATTTTTTTTTGTGTGTACTGTGTGAAGGAACAATTTGTGGACTATGGACCGTGGTGCACATAGAGCATGGTGCACCAAAAGACATATGTGCATAAGCAAAATAACATGACACTACGGCAAAAGAACATGC

mRNA sequence

ATGCCAAACATTCGGTTGGAGATAGTAATGGTGCAAGTCTATTGCTTTGGCTTTGTGCCTTCGTGTATAGTTGTAGAAGCTAATTACAGAAACTTGATCGCTCATGGACTTGAGCTGACAGTAGGATCAATGGAAGAATTATATGGCAGAAGAGCACTCAATATACGAAAATTTGATCTCCTCGGTTCTCAAGAAGAAAAGAAAGAAGAGAGCTATGCTCCAACATATATCATATTGCTTCAGCAATTCACCAAAATAGTCCCTATCGTAATGGAGATGTTATTCAGGGAGACGAACTCTTTGTCACGTGTTTTAGATCTCAACAATGTGCTAATCACCTGATTCTTCTTCAAAGTAATTCCTCATAAATGCTCAACATTGCTGGTGTTGCGTTTGGAACTTGTGTATTTTATATCTTTTTTACATAAGGGAAGCCAAAATGCCTTCACCGTTTCGGATGGAGTAATTCTGTAGAGGCCTGATCACTGCGATTGCTCAAGAACAAGATTAAGAAAAGAAATGAGCAAAGGATGTTGATAATAATGAAGAATTAAGTGATGATCAAGAATGTTAAGAGTTATGGTATATCTAGGGTTCTAGCAGAGTTGTGTTAGTTTGGGAATCTAATAGAGTCCTAAACCTAATTTCCTATAATAACACAACTCTAGTTTCCTAAACATACTAGAACCTTAGATATACCATAACTCTAACAAAGAAGAAGTGTGAGGATGTGATTAGGCCGTTGTTTGAGTCTGATGGTGAACAAGATGATTTGTTCTGAGGCATCAAATGATGAGGTTTTTGAGGGTCAAAACTCAAAAGCAATTGTGGGTTTTTGAGGGTTCGCGAAATAGGGAAGTTCTGCCTAAAGGTGAGATTATTTTCGAACAATTGAAGACTGTTTTATGAAGATCAAACAAATGTACGACTTAAATAATTATATCTTCCTATATGTATATTTATTTACTTTTTTATTAAGGAAATGCCTTCACCATTTCGGATCTAAACAATTTTCGTTCTTATGGATGAAATTCAATGCTTCATGATAAAAAGGAACTTTGTAGTACATTTTTTTTTGTGTGTACTGTGTGAAGGAACAATTTGTGGACTATGGACCGTGGTGCACATAGAGCATGGTGCACCAAAAGACATATGTGCATAAGCAAAATAACATGACACTACGGCAAAAGAACATGC

Coding sequence (CDS)

ATGCCAAACATTCGGTTGGAGATAGTAATGGTGCAAGTCTATTGCTTTGGCTTTGTGCCTTCGTGTATAGTTGTAGAAGCTAATTACAGAAACTTGATCGCTCATGGACTTGAGCTGACAGTAGGATCAATGGAAGAATTATATGGCAGAAGAGCACTCAATATACGAAAATTTGATCTCCTCGGTTCTCAAGAAGAAAAGAAAGAAGAGAGCTATGCTCCAACATATATCATATTGCTTCAGCAATTCACCAAAATAGTCCCTATCGTAATGGAGATGTTATTCAGGGAGACGAACTCTTTGTCACGTGTTTTAGATCTCAACAATGTGCTAATCACCTGA

Protein sequence

MPNIRLEIVMVQVYCFGFVPSCIVVEANYRNLIAHGLELTVGSMEELYGRRALNIRKFDLLGSQEEKKEESYAPTYIILLQQFTKIVPIVMEMLFRETNSLSRVLDLNNVLIT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07739.1Spo07739.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo07739.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07739.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07739.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07739.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0015940 pantothenate biosynthetic process
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0008897 holo-[acyl-carrier-protein] synthase activity
molecular_function GO:0000287 magnesium ion binding
RNA-Seq Expression