Spo07759 (gene)

Overview
NameSpo07759
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 46120189 .. 46120534 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCATGAAAGTCCAATGTAAGACTCTTGTTCTTGTTCTTGTTCTTGTTCTTGCACTGGTTTTGCTGTCATGGTCGAGTGGAGTGCAAGCGAGGTTAATAGGTGTATCGTCTCAGACATTAAAACATCTGCGATCCGATATGAAGAATCCTTTCAACAAGGTAGACTCGAGTTTTCGAAGGATACCTCCTAGCAGATCGAATCCAACCCAGAACAAGTAAATTCTGGTTTTGTTCATGATCAAGTCTTCAGAAAGAATAGTTAGGTGCTTCATAGTTGTCTCAGATACTGTGTTTCTTGTTCTGTTTTTTTGTCAGGTTGAAGCCTCTACTACTTCATGGATGA

mRNA sequence

ATGACCATGAAAGTCCAATGTAAGACTCTTGTTCTTGTTCTTGTTCTTGTTCTTGCACTGGTTTTGCTGTCATGGTCGAGTGGAGTGCAAGCGAGGTTAATAGGTGTATCGTCTCAGACATTAAAACATCTGCGATCCGATATGAAGAATCCTTTCAACAAGGTAGACTCGAGTTTTCGAAGGATACCTCCTAGCAGATCGAATCCAACCCAGAACAAGTTGAAGCCTCTACTACTTCATGGATGA

Coding sequence (CDS)

ATGACCATGAAAGTCCAATGTAAGACTCTTGTTCTTGTTCTTGTTCTTGTTCTTGCACTGGTTTTGCTGTCATGGTCGAGTGGAGTGCAAGCGAGGTTAATAGGTGTATCGTCTCAGACATTAAAACATCTGCGATCCGATATGAAGAATCCTTTCAACAAGGTAGACTCGAGTTTTCGAAGGATACCTCCTAGCAGATCGAATCCAACCCAGAACAAGTTGAAGCCTCTACTACTTCATGGATGA

Protein sequence

MTMKVQCKTLVLVLVLVLALVLLSWSSGVQARLIGVSSQTLKHLRSDMKNPFNKVDSSFRRIPPSRSNPTQNKLKPLLLHG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07759.1Spo07759.1mRNA


Homology
[Close]
BLAST of Spo07759.1 vs. NCBI nr
Match: gi|870852848|gb|KMT04729.1| (hypothetical protein BVRB_7g169100 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 98.2 bits (243), Expect = 6.900e-18
Identity = 56/71 (78.87%), Postives = 60/71 (84.51%), Query Frame = 1 

		  

Query: 3  MKVQCKTLVLVLVLVLALVLLSWSSGVQARLIGVSSQTLKHLRSDMKNPFNKVDSSFRRI 62
          MKV CKT+VLVLVL   LVLLSWSSG +ARL+ VSSQ+LKHLRS  KNP   VDSSFRRI
Sbjct: 1  MKVYCKTIVLVLVL--GLVLLSWSSGARARLLVVSSQSLKHLRSHEKNPSKNVDSSFRRI 60

Query: 63 PPSRSNPTQNK 74
          PPSRSNPTQNK
Sbjct: 61 PPSRSNPTQNK 69
[Close]
BLAST of Spo07759.1 vs. NCBI nr
Match: gi|593331269|ref|XP_007139061.1| (hypothetical protein PHAVU_009G261500g [Phaseolus vulgaris])

HSP 1 Score: 58.2 bits (139), Expect = 8.000e-6
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 1 

		  

Query: 16 LVLALVLLSWSSGVQARLIGV-------SSQTLKHLRSDMKNPFNKVDSSFRRIPPSRSN 75
          L L+L+LL+WS+   A +          SSQTL  L +  KN   ++DSSFRRIPPS+SN
Sbjct: 13 LTLSLLLLTWSTRATAEVFPTIQVHSWPSSQTLSSLHAHRKNLSKQLDSSFRRIPPSKSN 72

Query: 76 PTQNKLKP 77
          PTQNK  P
Sbjct: 73 PTQNKFNP 80
[Close]
BLAST of Spo07759.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXK0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g169100 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.800e-18
Identity = 56/71 (78.87%), Postives = 60/71 (84.51%), Query Frame = 1 

		  

Query: 3  MKVQCKTLVLVLVLVLALVLLSWSSGVQARLIGVSSQTLKHLRSDMKNPFNKVDSSFRRI 62
          MKV CKT+VLVLVL   LVLLSWSSG +ARL+ VSSQ+LKHLRS  KNP   VDSSFRRI
Sbjct: 1  MKVYCKTIVLVLVL--GLVLLSWSSGARARLLVVSSQSLKHLRSHEKNPSKNVDSSFRRI 60

Query: 63 PPSRSNPTQNK 74
          PPSRSNPTQNK
Sbjct: 61 PPSRSNPTQNK 69
[Close]
BLAST of Spo07759.1 vs. UniProtKB/TrEMBL
Match: V7B0H4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G261500g PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.600e-6
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 1 

		  

Query: 16 LVLALVLLSWSSGVQARLIGV-------SSQTLKHLRSDMKNPFNKVDSSFRRIPPSRSN 75
          L L+L+LL+WS+   A +          SSQTL  L +  KN   ++DSSFRRIPPS+SN
Sbjct: 13 LTLSLLLLTWSTRATAEVFPTIQVHSWPSSQTLSSLHAHRKNLSKQLDSSFRRIPPSKSN 72

Query: 76 PTQNKLKP 77
          PTQNK  P
Sbjct: 73 PTQNKFNP 80
The following BLAST results are available for this feature:
BLAST of Spo07759.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 2
Match NameE-valueIdentityDescription
gi|870852848|gb|KMT04729.1|6.9e-1878.8hypothetical protein BVRB_7g16... [more]
gi|593331269|ref|XP_007139061.1|8.0e-650.0hypothetical protein PHAVU_009... [more]
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BLAST of Spo07759.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0J8BXK0_BETVU4.8e-1878.8Uncharacterized protein OS=Bet... [more]
V7B0H4_PHAVU5.6e-650.0Uncharacterized protein OS=Pha... [more]
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BLAST of Spo07759.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07759.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046339 diacylglycerol metabolic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0051258 protein polymerization
biological_process GO:0097503 sialylation
biological_process GO:0006486 protein glycosylation
biological_process GO:0009860 pollen tube growth
biological_process GO:0009846 pollen germination
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006950 response to stress
biological_process GO:0007155 cell adhesion
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0007020 microtubule nucleation
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0007017 microtubule-based process
biological_process GO:0071258 cellular response to gravity
biological_process GO:0044237 cellular metabolic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006508 proteolysis
biological_process GO:0008152 metabolic process
biological_process GO:0016311 dephosphorylation
cellular_component GO:0005622 intracellular
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005768 endosome
cellular_component GO:0016020 membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0005874 microtubule
cellular_component GO:0045298 tubulin complex
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005618 cell wall
cellular_component GO:0005829 cytosol
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005525 GTP binding
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0003924 GTPase activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008373 sialyltransferase activity
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008253 5'-nucleotidase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004435 phosphatidylinositol phospholipase C activity
molecular_function GO:0008422 beta-glucosidase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo052300.77Barchart | Table
Spo068290.75Barchart | Table
Spo018680.75Barchart | Table
Spo244400.74Barchart | Table
Spo214740.73Barchart | Table
Spo258730.73Barchart | Table
Spo212890.73Barchart | Table
Spo229930.73Barchart | Table
Spo013080.73Barchart | Table
Spo053110.73Barchart | Table
Spo271590.72Barchart | Table
Spo013840.72Barchart | Table
Spo215420.72Barchart | Table
Spo151450.72Barchart | Table
Spo163210.72Barchart | Table
Spo127420.71Barchart | Table
Spo191960.71Barchart | Table
Spo168170.71Barchart | Table
Spo057510.71Barchart | Table
Spo068810.71Barchart | Table
Spo244270.71Barchart | Table
Spo030270.71Barchart | Table
Spo107980.71Barchart | Table
Spo253510.70Barchart | Table
Spo107520.70Barchart | Table
Spo268510.70Barchart | Table
Spo191950.70Barchart | Table
Spo225280.70Barchart | Table
Spo242230.70Barchart | Table
Spo268500.70Barchart | Table
Spo218110.70Barchart | Table
Spo261950.70Barchart | Table
Spo077680.70Barchart | Table
Spo090930.70Barchart | Table
Spo038580.69Barchart | Table
Spo209660.69Barchart | Table
Spo226660.69Barchart | Table
Spo227120.69Barchart | Table
Spo037390.69Barchart | Table
Spo003580.69Barchart | Table
Spo255930.69Barchart | Table
Spo137800.69Barchart | Table
Spo165680.69Barchart | Table
Spo168730.69Barchart | Table
Spo105860.68Barchart | Table
Spo099230.68Barchart | Table
Spo092330.68Barchart | Table
Spo245030.68Barchart | Table
Spo197730.68Barchart | Table
Spo076230.68Barchart | Table
Spo200530.68Barchart | Table
Spo051340.68Barchart | Table
Spo263020.68Barchart | Table
Spo176280.68Barchart | Table
Spo035050.68Barchart | Table
Spo243880.68Barchart | Table
Spo189070.68Barchart | Table
Spo228760.68Barchart | Table
Spo032210.68Barchart | Table
Spo266610.68Barchart | Table
Spo239390.68Barchart | Table
Spo148570.68Barchart | Table
Spo146970.68Barchart | Table
Spo070490.67Barchart | Table
Spo006800.67Barchart | Table
Spo019330.67Barchart | Table
Spo043770.67Barchart | Table
Spo047630.67Barchart | Table
Spo085990.67Barchart | Table
Spo120250.67Barchart | Table
Spo141300.67Barchart | Table
Spo158500.67Barchart | Table
Spo170850.67Barchart | Table
Spo189420.67Barchart | Table
Spo204460.67Barchart | Table
Spo223640.67Barchart | Table
Spo236900.67Barchart | Table
Spo262350.67Barchart | Table
Spo219960.66Barchart | Table
Spo162090.66Barchart | Table
Spo258740.66Barchart | Table
Spo300250.66Barchart | Table
Spo035770.66Barchart | Table
Spo031270.66Barchart | Table
Spo006370.66Barchart | Table
Spo005460.66Barchart | Table
Spo182960.66Barchart | Table
Spo168840.66Barchart | Table
Spo164820.66Barchart | Table
Spo247860.66Barchart | Table
Spo189320.65Barchart | Table
Spo188050.65Barchart | Table
Spo087560.65Barchart | Table
Spo083590.65Barchart | Table
Spo050070.65Barchart | Table
Spo076040.65Barchart | Table
Spo222600.65Barchart | Table