Spo07793 (gene)

Overview
NameSpo07793
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 46341593 .. 46345670 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATCGGAATAGAAAAGACAGGAGTTGAAGAGAGAGAAAACAAGAGTAGACGTCCCCGAAAAGAGAAAGAGAAAAGACGGCGCGTATGAGAAGAAATTGCAGAGAAATGTTTCTCTCTCTAGAAATGGCGTGGTTTGGGGTGTTTCTCTCTCTAACAATCTCTATCCAAGGGGGGATTGCGGTTTGCTGAGGAGGAGTTGGTTGTTTGGTAGTGAAGGACAGGTCAGGTCAGTCAGAAGAGGTGGAGGGTTGGTTTAACCGATTAAGGAGAAGTATCATTCAATTTTTTTACAGTACTTTTTTGCCTTTTGGGACATTCTTTATTTTCTCTGCTTACAAGTAGTTATACTCTCTTTTTTCTTTTTCTTTTTTTTGTGTGTTTTTTTTCTTCTAATTTAAGCTTTTCATTTTTTCAAGGTATCTCGAAAGAATTGCACAAAATAAAGGATATTTTAGTAACTTTACGTTTAAGTTGTTGATGGGGGTTTTAGAGATGACATAATGTTACGTGCTTAACTAATTATTTCTAGTGTTTAACTAATTGATACTTAATTAATTAATTTTATTGCTTAACTTATATGATACCAAGGTGGTCTCTTGTATAATAACGCTTTATATAAAAGTTTGTAGATTTTTGAGATGACATAATGTTAGTCTTTTTTTAATTTTTAATACAAATGTCTGATGTTCAAGAACAAATATTACATAGAAAACCACAAATATTGTACATGAGATTATTTAAAAACTTGCTATTAGTTACACGTTTGTCATTGATATATACTTGCCACAATACAAGTTTGCCATTGGTTGCAAAAAGAGGTTTTTACCATGGATAAAACTAAAACCGCTAAAATAATCAAAACTGAAATCAGCTTCCTGTTTTATGAAAACAAAAAACTCAAAACAGGAAATGATGCCGAACATGCCCTCAATTAGCGAACAATGATTTACTAGAGTGAGTCGCTAACTGAACTATAAGGGGGAGCATAAACCCATTGCCATTCACCCTTAGATTACTGGATTGGTGAATCTCACAAGGGAAAACTTAAAATTCTAGTAGACAAAAACAGCAAGAACTTCACAGCTTCCATCTCCCAGAAAAAATAGAAGAGTATGATCTAAGCCCTTCTTTATAACATATATTCCACCTGCTCAAGTGCTCATACATACTCCATATATCAGTAACTTTGGAACACCATCAGCTGAGACAACTTGATCTTCGGTTAACAAAACTGATGGCAGGCAACCCCAGAAGGAAAAAAAAAATCAGGATATTTCAACAAGATTTAAGCATTAATCAATACATAATACACAGAAATAATTTCCATTATACCAGATTACCAGGTATGTGCAGTTTCAGCTCGGTGCAAAGACGAGCTGTATGCCTGTATCGTTAATCAACAAGATTACCAGGTATATCAGGATATTTCCATTATACCAGATTACCAGGTATATCAGGATATTTCAACAAGATTCAAGCATTAATCAACTAGATTAACAAGATTTAAGCATTAATCGACAAGATTTAAGCATTAATCAACACACAGAAATAATTTGCATTATACCAGATTAGTAGATTACCAGGTATTTGCAACTCCAGCTTTGTGCAAAGAACAGCTGCATGCCTGTATCGTTTCAGTAAAACGATTGCGTCTTGTGATTATTTAAGCAATCATTTTGCAGCACATTTCTTGCTCCCAATGGCATAATTTTCACTTCTTCATAAGAAACTCATAAAGCAAGAGGAATCGTGTGTGACAAAAAGTTCTGTTAGGAGAATGCTTCAGCTTTCATAATACTACTGCAAGGTTCACCTAGCAGAATCCTTTTCAAAGAATGCAACTTTAACCCTGTGTGTTTTCCTGTGTGTTTGATGAGAATATCCTCCATCTGTATATAATTCTACATGGTATCAGTAGAAAGACAAACGAATAACTGTAAATGGCCATCCTATGCAAGTCTGCAATCCTGACTCGGTGAGCACATAACTCTTAGCAATCTGAAATACTGTCCTTAACTCCTAAGGAGATTAAGCGAGTGATCTTCACTTCTTCAGTAGGGCTGTCAAAAACTGACCCGATTCAACCGATTTTTGACAAAAACCGAAGTGACCCGAAAAAAAAAGTCACACATTCAATCCGCATAAGCACAATGCACAACTACATTATCCGATTATACCCGAACCGATTATACCCGACCGATGACCCGATTTGACACCCCTATTCTCCAGTACTACCAATAATCCCTGCAAGAGCAAGAACCATTTTGAAAATGATGGAAACGATTTGTATCCCTCACAACAATTTCTCTTTCAATTACAATTGATGCAAATTTAAATGCTGAATGACAATCACCACATACTCGAATGTTCTTCTTAATTCGGATAGTGGATTTAGGCGGCGTGTTCAGACAAGCAAATGCCAAGGCAAGCTTTTCGCTGTGATGTTGCAATTTCACTTCTCTCTCATGCTCCTCTACAAACAAGAGAACATGACTTATATCTGGTACATAACCAATTCCTTTGATCTTTGCACATATACAATCCCACATCTCATAAATCTCTTTGCTTTGAGGATGAGTATCATCATCAGCAACAAACACATGAACTGAATTCCCAATCTCAACCCAGCTACAAGCAGGTTCCTTCCTTACCCTGCAATCTTTCATCATCTTTCTCACCTTAGCAACATCATTTCTTCTACCAGCCAAAGCATACATATTAGCAAGTATCACATACGGGCCTGAATCGTAAGGGTCAAGCTCAAAAACTCGTTCAGCTGCATAAACACCTAATTCCATGTTTCTGTGCATCCTACATGCACCCAACAGACATTTCCATATCTCTGCAACAGGATCCATGGGAATATCCGTAATAAATCTCAGAGCTTGATCGAGTTTTCCCGCTCGTCCTAGTAAATCAACTATTGTGACGTAATGCTCAATTTTTGGGTCTAAACCATATGTTTTTTTCATCATCTTGAAGTAATACAGTCCTTGTTTCACAAACCCAGCATGGCTACAAGAAGTAAGCAAGCAAAGAAATGTTACCGCGTTAGGTTGTATTCCAGTCTTTAGCATATTGTCAAATTGCTCCAATGATCTGTGCACAAGACCATGTTGGGCATATCCAGTTAACAATGAATTCCATGAAACAACATCTCGCACCATCAATCTAGTAAATACCTTTTCTGCTTCCTCAACACTCCCACATTTAGCATACATATGAAGAAGAGTGTGCCCAACAAAAGCAATAAGCTTCACCCCATATTTTATCACATGAGCATGTATACACTTCCCTTGCTCCAAGACTCCTGTGTTGGCACATGCATTGAGTACAGTTGAATATGTGAAATCATTGGGCTCAAAATCTTCCCTTTTCATCCTTTGGAACAAACTAAGAGTTTCCTCTCCTCTTTCCTTTCGAGCATGGCCAGCCATTAGGGCATTCCAAGAAACCTCATTTTTGCTCACAAGTCCATCAAATACTGATTGCGCTTCATTCATAAGGCCACACCTTGCATACAAATCTACAAGAGAAGTTCCGACATAGACACTTGAATCACAACCATATTTGATACAAAGGGTGTGTATATGCATACCATGCTTAGCACTACGTATTGTGTTGGAGGCCTTAAGGAGGCTAGAGAAGGTGAACTTGTTTGGTTTGAAACCAAGACAAAGCATCTTTGGAAATAAAGAAAGACCTTCCTCGGGCCTACCATTATGCGTATAAGCAATAATCATACTAGTCCAGGTGAATGTGTCCTTATACGGCATCTCATTAAAACATTTCCTAGCCTCATCTAAATTGCCACACTTAACATACATTTGTATGATGTTATTGAGAATAATAGTATCATCCTTAAACTCAGATGCAAGGACATTGGCATGAACTATTCTGCCTTCTCTGATATCACCCAACTCCATACATCTCTTCAACCCTCGTTCAACAACAAGTGCTCGTTGATTTTTTGTCCCAGAATCACTACTCTTGAGGAGAAGATCTTGATCGTGTGTTTGAAACGCGTCAAGAAGTCTTTCTTCTTCACATTCCAAAACATTGGGTTTGGTTGA

mRNA sequence

ATGATGATCGGAATAGAAAAGACAGGAGTTGAAGAGAGAGAAAACAAGAGTAGACGTCCCCGAAAAGAGAAAGAGAAAAGACGGCGCGTATGTGCAGTTTCAGCTCGGTGCAAAGACGAGCTGTATGCCTGTATCGTTAATCAACAAGATTACCAGGCGGCGTGTTCAGACAAGCAAATGCCAAGGCAAGCTTTTCGCTGTGATGTTGCAATTTCACTTCTCTCTCATGCTCCTCTACAAACAAGAGAACATGACTTATATCTGTCCTTGTTTCACAAACCCAGCATGGCTACAAGAAGTAAGCAAGCAAAGAAATGTTACCGCGTTAGTATCATCCTTAAACTCAGATGCAAGGACATTGGCATGAACTATTCTGCCTTCTCTGATATCACCCAACTCCATACATCTCTTCAACCCTCGTTCAACAACAAGTGCTCGTTGATTTTTTGTCCCAGAATCACTACTCTTGAGGAGAAGATCTTGATCGTGTGTTTGAAACGCGTCAAGAAGTCTTTCTTCTTCACATTCCAAAACATTGGGTTTGGTTGA

Coding sequence (CDS)

ATGATGATCGGAATAGAAAAGACAGGAGTTGAAGAGAGAGAAAACAAGAGTAGACGTCCCCGAAAAGAGAAAGAGAAAAGACGGCGCGTATGTGCAGTTTCAGCTCGGTGCAAAGACGAGCTGTATGCCTGTATCGTTAATCAACAAGATTACCAGGCGGCGTGTTCAGACAAGCAAATGCCAAGGCAAGCTTTTCGCTGTGATGTTGCAATTTCACTTCTCTCTCATGCTCCTCTACAAACAAGAGAACATGACTTATATCTGTCCTTGTTTCACAAACCCAGCATGGCTACAAGAAGTAAGCAAGCAAAGAAATGTTACCGCGTTAGTATCATCCTTAAACTCAGATGCAAGGACATTGGCATGAACTATTCTGCCTTCTCTGATATCACCCAACTCCATACATCTCTTCAACCCTCGTTCAACAACAAGTGCTCGTTGATTTTTTGTCCCAGAATCACTACTCTTGAGGAGAAGATCTTGATCGTGTGTTTGAAACGCGTCAAGAAGTCTTTCTTCTTCACATTCCAAAACATTGGGTTTGGTTGA

Protein sequence

MMIGIEKTGVEERENKSRRPRKEKEKRRRVCAVSARCKDELYACIVNQQDYQAACSDKQMPRQAFRCDVAISLLSHAPLQTREHDLYLSLFHKPSMATRSKQAKKCYRVSIILKLRCKDIGMNYSAFSDITQLHTSLQPSFNNKCSLIFCPRITTLEEKILIVCLKRVKKSFFFTFQNIGFG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07793.1Spo07793.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo07793.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07793.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07793.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07793.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0006012 galactose metabolic process
biological_process GO:0046396 D-galacturonate metabolic process
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0008152 metabolic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0032259 methylation
biological_process GO:0006486 protein glycosylation
biological_process GO:0009853 photorespiration
biological_process GO:0006816 calcium ion transport
biological_process GO:0009630 gravitropism
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0016043 cellular component organization
biological_process GO:0009987 cellular process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0010014 meristem initiation
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
cellular_component GO:0005622 intracellular
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0009507 chloroplast
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0019905 syntaxin binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004335 galactokinase activity
molecular_function GO:0047912 galacturonokinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005198 structural molecule activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo228940.76Barchart | Table
Spo230710.72Barchart | Table
Spo121070.72Barchart | Table
Spo059900.71Barchart | Table
Spo149420.71Barchart | Table
Spo140840.70Barchart | Table
Spo024070.70Barchart | Table
Spo245490.70Barchart | Table
Spo173290.70Barchart | Table
Spo050930.69Barchart | Table
Spo235880.69Barchart | Table
Spo099930.69Barchart | Table
Spo225290.69Barchart | Table
Spo075860.69Barchart | Table
Spo021070.68Barchart | Table
Spo154200.68Barchart | Table
Spo059280.68Barchart | Table
Spo092900.68Barchart | Table
Spo121550.68Barchart | Table
Spo064650.68Barchart | Table
Spo005360.68Barchart | Table
Spo087720.68Barchart | Table
Spo173910.68Barchart | Table
Spo271020.67Barchart | Table
Spo013970.67Barchart | Table
Spo018410.67Barchart | Table
Spo030020.67Barchart | Table
Spo071780.67Barchart | Table
Spo086800.67Barchart | Table
Spo096050.67Barchart | Table
Spo097520.67Barchart | Table
Spo099400.67Barchart | Table
Spo105000.67Barchart | Table
Spo119180.67Barchart | Table
Spo177550.67Barchart | Table
Spo208260.67Barchart | Table
Spo227600.67Barchart | Table
Spo229550.67Barchart | Table
Spo257430.67Barchart | Table
Spo270040.67Barchart | Table
Spo053410.66Barchart | Table
Spo247810.66Barchart | Table
Spo252300.66Barchart | Table
Spo174020.66Barchart | Table
Spo057310.66Barchart | Table
Spo110690.66Barchart | Table
Spo116230.66Barchart | Table
Spo003620.66Barchart | Table
Spo195580.66Barchart | Table
Spo197010.66Barchart | Table
Spo140080.66Barchart | Table
Spo265730.66Barchart | Table
Spo211320.66Barchart | Table
Spo220280.66Barchart | Table
Spo222550.66Barchart | Table
Spo051270.66Barchart | Table
Spo267890.66Barchart | Table
Spo049850.66Barchart | Table
Spo158650.66Barchart | Table
Spo168040.66Barchart | Table
Spo034380.66Barchart | Table
Spo022800.66Barchart | Table
Spo057280.66Barchart | Table
Spo239350.66Barchart | Table
Spo018400.66Barchart | Table
Spo268330.65Barchart | Table
Spo064640.65Barchart | Table
Spo258510.65Barchart | Table
Spo076090.65Barchart | Table
Spo229700.65Barchart | Table
Spo236640.65Barchart | Table
Spo245900.65Barchart | Table
Spo100970.65Barchart | Table
Spo254170.65Barchart | Table
Spo100190.65Barchart | Table
Spo088500.65Barchart | Table