Spo07893 (gene)

Overview
NameSpo07893
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSenescence regulator
Locationchr2 : 38974505 .. 38975008 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGTGCGAAGAGTTCCATGATGGCGAGGAGAAAGAGTAACTACCGATTCTTGAGCAATGATCTGATTCAACCACCGTCGATGAAAACCTCCGCTACGACGGAGTTGGAGTTCGATGAATCCGACATTTGGGGCGTGTCGACTCGGTCCGACTCGCCTCCGAGTTGGAGCAAGTCGTCGAGGAAGTCGATGACCGCGCCGACTCCAGCGAGGGGGAGGCGCGCAGGAGACGCGTCGTCTTTGCCGGTGAATATACCAGACTGGTCGAAGATACTCCGGGAGGAGTACAAGGCGCATAAGTGGAGTTTCGGCGAGGATTTAGTCAATGATTGTTACGGCGGAGATGACGACGGCGAGGGGTGGGTGGCGCCGCATGAGTATTTAGCGAGGCCGCAAATGGCGTCGTTGTCATTGCATGAAGGAAGTGGGAGGACGCTGACAGGGAGGGATCTAAATAAGGTTAGGAATGCAATTTTGGAGAAGACAGGGTTTCAAGATTAG

mRNA sequence

ATGGCTAGTGCGAAGAGTTCCATGATGGCGAGGAGAAAGAGTAACTACCGATTCTTGAGCAATGATCTGATTCAACCACCGTCGATGAAAACCTCCGCTACGACGGAGTTGGAGTTCGATGAATCCGACATTTGGGGCGTGTCGACTCGGTCCGACTCGCCTCCGAGTTGGAGCAAGTCGTCGAGGAAGTCGATGACCGCGCCGACTCCAGCGAGGGGGAGGCGCGCAGGAGACGCGTCGTCTTTGCCGGTGAATATACCAGACTGGTCGAAGATACTCCGGGAGGAGTACAAGGCGCATAAGTGGAGTTTCGGCGAGGATTTAGTCAATGATTGTTACGGCGGAGATGACGACGGCGAGGGGTGGGTGGCGCCGCATGAGTATTTAGCGAGGCCGCAAATGGCGTCGTTGTCATTGCATGAAGGAAGTGGGAGGACGCTGACAGGGAGGGATCTAAATAAGGTTAGGAATGCAATTTTGGAGAAGACAGGGTTTCAAGATTAG

Coding sequence (CDS)

ATGGCTAGTGCGAAGAGTTCCATGATGGCGAGGAGAAAGAGTAACTACCGATTCTTGAGCAATGATCTGATTCAACCACCGTCGATGAAAACCTCCGCTACGACGGAGTTGGAGTTCGATGAATCCGACATTTGGGGCGTGTCGACTCGGTCCGACTCGCCTCCGAGTTGGAGCAAGTCGTCGAGGAAGTCGATGACCGCGCCGACTCCAGCGAGGGGGAGGCGCGCAGGAGACGCGTCGTCTTTGCCGGTGAATATACCAGACTGGTCGAAGATACTCCGGGAGGAGTACAAGGCGCATAAGTGGAGTTTCGGCGAGGATTTAGTCAATGATTGTTACGGCGGAGATGACGACGGCGAGGGGTGGGTGGCGCCGCATGAGTATTTAGCGAGGCCGCAAATGGCGTCGTTGTCATTGCATGAAGGAAGTGGGAGGACGCTGACAGGGAGGGATCTAAATAAGGTTAGGAATGCAATTTTGGAGAAGACAGGGTTTCAAGATTAG

Protein sequence

MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKSSRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGEGWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo07893.1Spo07893.1mRNA


Homology
[Close]
BLAST of Spo07893.1 vs. NCBI nr
Match: gi|902194552|gb|KNA12583.1| (hypothetical protein SOVF_124490 [Spinacia oleracea])

HSP 1 Score: 340.5 bits (872), Expect = 1.700e-90
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 

		  

Query: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKS 60
           MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKS
Sbjct: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKS 60

Query: 61  SRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGE 120
           SRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGE
Sbjct: 61  SRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGE 120

Query: 121 GWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
           GWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD
Sbjct: 121 GWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 167
[Close]
BLAST of Spo07893.1 vs. NCBI nr
Match: gi|731356203|ref|XP_010689547.1| (PREDICTED: uncharacterized protein LOC104903237 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 202.6 bits (514), Expect = 5.400e-49
Identity = 112/169 (66.27%), Postives = 128/169 (75.74%), Query Frame = 1 

		  

Query: 2   ASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPP--SWSK 61
           ++ KS MMARR SNYRFL++D IQPP     +T ELEFDESDIWG STRSDSP   SW +
Sbjct: 3   STTKSYMMARRASNYRFLTSDPIQPPK----STPELEFDESDIWGGSTRSDSPETRSWRQ 62

Query: 62  SSRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKA-HKWSFGEDLVNDCYGGDDD 121
           S+R+++ APTP R RR   A+SLPVNIPDWSKILR+EYK   KWSF      D  G + +
Sbjct: 63  STRRAIAAPTPVR-RRGDTAASLPVNIPDWSKILRDEYKVDEKWSFDG---GDNGGDNGN 122

Query: 122 GEGWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
           GE WV PHEYLAR +MAS S+HEG GRTL GRDLNKVRNAI EKTGFQD
Sbjct: 123 GEEWVPPHEYLARTRMASFSVHEGIGRTLKGRDLNKVRNAIWEKTGFQD 163
[Close]
BLAST of Spo07893.1 vs. NCBI nr
Match: gi|297793625|ref|XP_002864697.1| (hypothetical protein ARALYDRAFT_496217 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 136.7 bits (343), Expect = 3.600e-29
Identity = 82/167 (49.10%), Postives = 107/167 (64.07%), Query Frame = 1 

		  

Query: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKS 60
           MA+ KS      + +YRFL  D    PS  T++ + LEFDESD++     SDSP      
Sbjct: 1   MATGKSYYA---RPSYRFLGTD---QPSYFTASDSGLEFDESDLYN-PIHSDSPDFRRII 60

Query: 61  SRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGE 120
           S  + +   P+    A  ASSLP+N+PDWSKILREEY+ ++    ED  ND    ++DG 
Sbjct: 61  SSSARSGKKPSNRPSAVAASSLPINVPDWSKILREEYRDNRRRSIED--NDDDDDNEDGG 120

Query: 121 GWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
           GW+ PHE+LA+ +MAS S+HEG GRTL GRDL++VRNAI EK GFQD
Sbjct: 121 GWLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKIGFQD 158
[Close]
BLAST of Spo07893.1 vs. NCBI nr
Match: gi|565435201|ref|XP_006281214.1| (hypothetical protein CARUB_v10027254mg [Capsella rubella])

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-28
Identity = 89/176 (50.57%), Postives = 109/176 (61.93%), Query Frame = 1 

		  

Query: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTE-----LEFDESDIWGVSTRSDSPP 60
           MA+ KS      + +YRFL  D  QP S  T+ TT      LEFDESD++     SDSP 
Sbjct: 1   MATGKSYYA---RPSYRFLGTD--QPSSYFTTTTTTATDSGLEFDESDLYN-PIHSDSPD 60

Query: 61  SWSKSSRKSMTAPTPARGRRAG--DASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCY 120
              K S  S +   P+  R +    ASSLPVN+PDWSKILR EY+ ++    ED  ND  
Sbjct: 61  FRRKISTPSRSGKKPSTHRPSAVTTASSLPVNVPDWSKILRGEYRDNRRRIIED--NDDE 120

Query: 121 GGDD--DGEGWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
            GDD  DG  W+ PHE+LA+ +MAS S+HEG GRTL GRDL++VRNAI EK GFQD
Sbjct: 121 DGDDCEDGGDWLPPHEFLAKTRMASFSVHEGIGRTLKGRDLSRVRNAIFEKIGFQD 168
[Close]
BLAST of Spo07893.1 vs. NCBI nr
Match: gi|674234829|gb|KFK27594.1| (hypothetical protein AALP_AA8G404000 [Arabis alpina])

HSP 1 Score: 134.0 bits (336), Expect = 2.400e-28
Identity = 84/162 (51.85%), Postives = 102/162 (62.96%), Query Frame = 1 

		  

Query: 13  KSNYRFLSNDLIQPPSMKTSATTELEFDESDIW---GVSTRSDSPPSWSKSSR---KSMT 72
           + +YRFL  D     S  T+  + LEFDESD++   GVS  SDSP    KS+R   KS  
Sbjct: 10  RPSYRFLGTD---QSSYFTATESGLEFDESDLYASSGVSIHSDSPEFRRKSTRSGKKSSN 69

Query: 73  APTP-ARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGEGWVAP 132
            P+  A    A  ASSLP+N+PDWSKIL +E   H+ S    +  D  G  DDG  WV P
Sbjct: 70  RPSSCAVASSAVAASSLPINVPDWSKILGQE---HRNSRRRSIEVDDDGDSDDGGDWVPP 129

Query: 133 HEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
           HE+LAR +MAS S+HEG GRTL GRDL++VRNAI EK GFQD
Sbjct: 130 HEFLARTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKIGFQD 165
[Close]
BLAST of Spo07893.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0W1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124490 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.200e-90
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 

		  

Query: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKS 60
           MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKS
Sbjct: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKS 60

Query: 61  SRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGE 120
           SRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGE
Sbjct: 61  SRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGE 120

Query: 121 GWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
           GWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD
Sbjct: 121 GWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 167
[Close]
BLAST of Spo07893.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BQ13_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g207920 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.800e-49
Identity = 112/169 (66.27%), Postives = 128/169 (75.74%), Query Frame = 1 

		  

Query: 2   ASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPP--SWSK 61
           ++ KS MMARR SNYRFL++D IQPP     +T ELEFDESDIWG STRSDSP   SW +
Sbjct: 3   STTKSYMMARRASNYRFLTSDPIQPPK----STPELEFDESDIWGGSTRSDSPETRSWRQ 62

Query: 62  SSRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKA-HKWSFGEDLVNDCYGGDDD 121
           S+R+++ APTP R RR   A+SLPVNIPDWSKILR+EYK   KWSF      D  G + +
Sbjct: 63  STRRAIAAPTPVR-RRGDTAASLPVNIPDWSKILRDEYKVDEKWSFDG---GDNGGDNGN 122

Query: 122 GEGWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
           GE WV PHEYLAR +MAS S+HEG GRTL GRDLNKVRNAI EKTGFQD
Sbjct: 123 GEEWVPPHEYLARTRMASFSVHEGIGRTLKGRDLNKVRNAIWEKTGFQD 163
[Close]
BLAST of Spo07893.1 vs. UniProtKB/TrEMBL
Match: D7MTW6_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496217 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.500e-29
Identity = 82/167 (49.10%), Postives = 107/167 (64.07%), Query Frame = 1 

		  

Query: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKS 60
           MA+ KS      + +YRFL  D    PS  T++ + LEFDESD++     SDSP      
Sbjct: 1   MATGKSYYA---RPSYRFLGTD---QPSYFTASDSGLEFDESDLYN-PIHSDSPDFRRII 60

Query: 61  SRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGE 120
           S  + +   P+    A  ASSLP+N+PDWSKILREEY+ ++    ED  ND    ++DG 
Sbjct: 61  SSSARSGKKPSNRPSAVAASSLPINVPDWSKILREEYRDNRRRSIED--NDDDDDNEDGG 120

Query: 121 GWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
           GW+ PHE+LA+ +MAS S+HEG GRTL GRDL++VRNAI EK GFQD
Sbjct: 121 GWLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKIGFQD 158
[Close]
BLAST of Spo07893.1 vs. UniProtKB/TrEMBL
Match: R0EXW8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027254mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.400e-29
Identity = 89/176 (50.57%), Postives = 109/176 (61.93%), Query Frame = 1 

		  

Query: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTE-----LEFDESDIWGVSTRSDSPP 60
           MA+ KS      + +YRFL  D  QP S  T+ TT      LEFDESD++     SDSP 
Sbjct: 1   MATGKSYYA---RPSYRFLGTD--QPSSYFTTTTTTATDSGLEFDESDLYN-PIHSDSPD 60

Query: 61  SWSKSSRKSMTAPTPARGRRAG--DASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCY 120
              K S  S +   P+  R +    ASSLPVN+PDWSKILR EY+ ++    ED  ND  
Sbjct: 61  FRRKISTPSRSGKKPSTHRPSAVTTASSLPVNVPDWSKILRGEYRDNRRRIIED--NDDE 120

Query: 121 GGDD--DGEGWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
            GDD  DG  W+ PHE+LA+ +MAS S+HEG GRTL GRDL++VRNAI EK GFQD
Sbjct: 121 DGDDCEDGGDWLPPHEFLAKTRMASFSVHEGIGRTLKGRDLSRVRNAIFEKIGFQD 168
[Close]
BLAST of Spo07893.1 vs. UniProtKB/TrEMBL
Match: A0A087GCJ2_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G404000 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.600e-28
Identity = 84/162 (51.85%), Postives = 102/162 (62.96%), Query Frame = 1 

		  

Query: 13  KSNYRFLSNDLIQPPSMKTSATTELEFDESDIW---GVSTRSDSPPSWSKSSR---KSMT 72
           + +YRFL  D     S  T+  + LEFDESD++   GVS  SDSP    KS+R   KS  
Sbjct: 10  RPSYRFLGTD---QSSYFTATESGLEFDESDLYASSGVSIHSDSPEFRRKSTRSGKKSSN 69

Query: 73  APTP-ARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDDGEGWVAP 132
            P+  A    A  ASSLP+N+PDWSKIL +E   H+ S    +  D  G  DDG  WV P
Sbjct: 70  RPSSCAVASSAVAASSLPINVPDWSKILGQE---HRNSRRRSIEVDDDGDSDDGGDWVPP 129

Query: 133 HEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
           HE+LAR +MAS S+HEG GRTL GRDL++VRNAI EK GFQD
Sbjct: 130 HEFLARTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKIGFQD 165
[Close]
BLAST of Spo07893.1 vs. TAIR (Arabidopsis)
Match: AT5G60680.1 (Protein of unknown function, DUF584)

HSP 1 Score: 131.0 bits (328), Expect = 7.000e-31
Identity = 84/173 (48.55%), Postives = 109/173 (63.01%), Query Frame = 1 

		  

Query: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPP----- 60
           MA+ KS      + +YRFL  D    PS  T++ + LEFDESD++     SDSP      
Sbjct: 1   MATGKSYYA---RPSYRFLGTD---QPSYFTASDSGLEFDESDLFN-PIHSDSPDFCRKI 60

Query: 61  -SWSKSSRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYG 120
            S  +S +KS   P+ A    A  ASSLPVN+PDWSKILR EY+ ++    ED  +D   
Sbjct: 61  SSSVRSGKKSSNRPSAASSAAA--ASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDDDD 120

Query: 121 GDDDGEGWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
            +D G+ W+ PHE+LA+ +MAS S+HEG GRTL GRDL++VRNAI EK GFQD
Sbjct: 121 NEDGGD-WLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163
[Close]
BLAST of Spo07893.1 vs. TAIR (Arabidopsis)
Match: AT3G45210.1 (Protein of unknown function, DUF584)

HSP 1 Score: 115.5 bits (288), Expect = 3.100e-26
Identity = 80/170 (47.06%), Postives = 104/170 (61.18%), Query Frame = 1 

		  

Query: 1   MASAKSSMMARRKSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSK- 60
           MA+A      +R S +RFL  D     +   +  +E EFDESD++  S RSDSP    K 
Sbjct: 1   MATATRKSYYQRPS-HRFLPTDR----TYNVTGDSEFEFDESDLY--SNRSDSPEFRRKL 60

Query: 61  --SSRKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDD 120
             S+RKS    +PA       ASSLP+N+ +WSKIL +E +       + + ND    DD
Sbjct: 61  ITSNRKS----SPATVTTTTVASSLPMNVQNWSKILGKENR-------KSIEND----DD 120

Query: 121 DGEGWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
            GEG + PHEYLA+ +MAS S+HEG GRTL GRD+++VRNAILEKTGF D
Sbjct: 121 GGEGKLPPHEYLAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148
[Close]
BLAST of Spo07893.1 vs. TAIR (Arabidopsis)
Match: AT5G03230.1 (Protein of unknown function, DUF584)

HSP 1 Score: 99.8 bits (247), Expect = 1.700e-21
Identity = 72/170 (42.35%), Postives = 90/170 (52.94%), Query Frame = 1 

		  

Query: 9   MARRKSNYRFLSNDLIQP-PSMKTSATTELEFDESDIWGVSTRS-----DSPPSWSKSS- 68
           MA RK    F+    I P P  + S     EFDESDI  +         D+  S S S  
Sbjct: 1   MASRK--LFFVKPKYIYPEPKPEMSDENVFEFDESDIHNLGDHQLPNSFDAKRSISISRL 60

Query: 69  RKSMTAPTPARGRRAGDASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDDD--- 128
           R+  T    +  R      SLPVNIPDWSKIL+ EY+ H  +  +D  +D    DDD   
Sbjct: 61  RRKPTKTGDSGNREITKTGSLPVNIPDWSKILKSEYRGH--AIPDDDSDDDDEDDDDSND 120

Query: 129 -GEGWVAPHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
            G   + PHEYLAR + +S ++HEG G T  GRDL ++RNAI EK GFQD
Sbjct: 121 GGRRMIPPHEYLARRRGSSFTVHEGIGGTAKGRDLRRLRNAIWEKIGFQD 166
[Close]
BLAST of Spo07893.1 vs. TAIR (Arabidopsis)
Match: AT2G28400.1 (Protein of unknown function, DUF584)

HSP 1 Score: 94.7 bits (234), Expect = 5.600e-20
Identity = 63/163 (38.65%), Postives = 91/163 (55.83%), Query Frame = 1 

		  

Query: 13  KSNYRFLSNDLIQPPSMKTSATTELEFDESDIWGVSTRSDSPPSWSKSSRKSMTAPTPAR 72
           + ++RF + D         +AT++ E DE D++   + S S  S+S  +  S    T  +
Sbjct: 10  RPSHRFFTTD------QHVTATSDFELDEWDLFNTGSDSSSSFSFSDLTITSGRTGTNRQ 69

Query: 73  GRRAGD----ASSLPVNIPDWSKILREEYKAHKWSFGEDLVNDCYGGDD----DGEGWVA 132
                D    ASSLPVN+PDWSKIL +E +  +    E+ V+    GD+    +G   V 
Sbjct: 70  IHGGSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEEEVD----GDEILCGEGTRRVP 129

Query: 133 PHEYLARPQMASLSLHEGSGRTLTGRDLNKVRNAILEKTGFQD 168
           PHE LA  +MAS S+HEG+GRTL GRDL++VRN I +  G +D
Sbjct: 130 PHELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162
[Close]
BLAST of Spo07893.1 vs. TAIR (Arabidopsis)
Match: AT4G04630.1 (Protein of unknown function, DUF584)

HSP 1 Score: 87.4 bits (215), Expect = 8.900e-18
Identity = 58/142 (40.85%), Postives = 75/142 (52.82%), Query Frame = 1 

		  

Query: 38  EFDESDIWGVSTRSDS-------PPSWSKSSRKSMTAPTPARGRRAGDA---SSLPVNIP 97
           EF E D+W V    ++       P S   SS  S ++P   R  +       SS P+N+P
Sbjct: 26  EFQEEDVWSVLREGETSSPEMKIPKSHFSSSSSSSSSPWNIRRSKEVSGVKQSSAPMNVP 85

Query: 98  DWSKILREEYKAHKWSFGEDLVNDCYGGDDDGEGWVAPHEY----LARPQMASLSLHEGS 157
           DWSK+  +     + S       D    DDDG   V PHE+    LAR Q++S S+ EG 
Sbjct: 86  DWSKVYGDSKSNRRSSHLHSHAADDDDEDDDG-CMVPPHEWVARKLARTQISSFSMCEGV 145

Query: 158 GRTLTGRDLNKVRNAILEKTGF 166
           GRTL GRDL+KVRNA+L KTGF
Sbjct: 146 GRTLKGRDLSKVRNAVLSKTGF 166
The following BLAST results are available for this feature:
BLAST of Spo07893.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902194552|gb|KNA12583.1|1.7e-90100.hypothetical protein SOVF_1244... [more]
gi|731356203|ref|XP_010689547.1|5.4e-4966.2PREDICTED: uncharacterized pro... [more]
gi|297793625|ref|XP_002864697.1|3.6e-2949.1hypothetical protein ARALYDRAF... [more]
gi|565435201|ref|XP_006281214.1|1.1e-2850.5hypothetical protein CARUB_v10... [more]
gi|674234829|gb|KFK27594.1|2.4e-2851.8hypothetical protein AALP_AA8G... [more]
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BLAST of Spo07893.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R0W1_SPIOL1.2e-90100.Uncharacterized protein OS=Spi... [more]
A0A0J8BQ13_BETVU3.8e-4966.2Uncharacterized protein OS=Bet... [more]
D7MTW6_ARALL2.5e-2949.1Putative uncharacterized prote... [more]
R0EXW8_9BRAS7.4e-2950.5Uncharacterized protein OS=Cap... [more]
A0A087GCJ2_ARAAL1.6e-2851.8Uncharacterized protein OS=Ara... [more]
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BLAST of Spo07893.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07893.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G60680.17.0e-3148.5Protein of unknown function, D... [more]
AT3G45210.13.1e-2647.0Protein of unknown function, D... [more]
AT5G03230.11.7e-2142.3Protein of unknown function, D... [more]
AT2G28400.15.6e-2038.6Protein of unknown function, D... [more]
AT4G04630.18.9e-1840.8Protein of unknown function, D... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007608Senescence regulator S40PFAMPF04520Senescence_regcoord: 63..167
score: 7.6
NoneNo IPR availablePANTHERPTHR33083FAMILY NOT NAMEDcoord: 15..167
score: 1.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
RNA-Seq Expression