Spo07898 (gene) | SpinachBase

Overview


Name	Spo07898
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr2 : 39089433 .. 39089960 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCATCAATGGCGAACTCTTCTTTTCTCTCTCCTCTTCCTCTCTCTTCACACTCACTTCGTCGTCTCTGCAGATCCACCTTCTCCGTCTCCATCCCCTCAACTCCCCGCTGATTCGGATTCTCTCTCTCCTTCACCAATCTCCCTTCCTCCATCGCCTACTTCTTCTCCTCCATTATCTCAACAACCTTCAGACATTGCGTCTCCACCTTCCTCCTCTTCACCATCCCCTTCTCCTTCACACGACGCCGTATCAGACTCTCCATCCCCAGCGACGTTACCAGAATCCGACTCTTCTCCTTCTCCTTCTACAGCACCGTCTTCGGCGGCGGACGAGGTTGCCAAAGTACAGAGTCAAGAACAGAAGCCTTCTAGTGGAATGAGTGGCGGCCATAAAGCGGGAGTCGTTGTTGGAGTTATGGTTGGAGTGGCGGCGGTGGGTTGCGCTGGGTGGGTTTACAAGAAACGCCAAGATAATCTCCGAAGAACTCAGTATGGGTACAACACAAGAACTACTATGATTTGA

mRNA sequence

ATGGTTCATCAATGGCGAACTCTTCTTTTCTCTCTCCTCTTCCTCTCTCTTCACACTCACTTCGTCGTCTCTGCAGATCCACCTTCTCCGTCTCCATCCCCTCAACTCCCCGCTGATTCGGATTCTCTCTCTCCTTCACCAATCTCCCTTCCTCCATCGCCTACTTCTTCTCCTCCATTATCTCAACAACCTTCAGACATTGCGTCTCCACCTTCCTCCTCTTCACCATCCCCTTCTCCTTCACACGACGCCGTATCAGACTCTCCATCCCCAGCGACGTTACCAGAATCCGACTCTTCTCCTTCTCCTTCTACAGCACCGTCTTCGGCGGCGGACGAGGTTGCCAAAGTACAGAGTCAAGAACAGAAGCCTTCTAGTGGAATGAGTGGCGGCCATAAAGCGGGAGTCGTTGTTGGAGTTATGGTTGGAGTGGCGGCGGTGGGTTGCGCTGGGTGGGTTTACAAGAAACGCCAAGATAATCTCCGAAGAACTCAGTATGGGTACAACACAAGAACTACTATGATTTGA

Coding sequence (CDS)

ATGGTTCATCAATGGCGAACTCTTCTTTTCTCTCTCCTCTTCCTCTCTCTTCACACTCACTTCGTCGTCTCTGCAGATCCACCTTCTCCGTCTCCATCCCCTCAACTCCCCGCTGATTCGGATTCTCTCTCTCCTTCACCAATCTCCCTTCCTCCATCGCCTACTTCTTCTCCTCCATTATCTCAACAACCTTCAGACATTGCGTCTCCACCTTCCTCCTCTTCACCATCCCCTTCTCCTTCACACGACGCCGTATCAGACTCTCCATCCCCAGCGACGTTACCAGAATCCGACTCTTCTCCTTCTCCTTCTACAGCACCGTCTTCGGCGGCGGACGAGGTTGCCAAAGTACAGAGTCAAGAACAGAAGCCTTCTAGTGGAATGAGTGGCGGCCATAAAGCGGGAGTCGTTGTTGGAGTTATGGTTGGAGTGGCGGCGGTGGGTTGCGCTGGGTGGGTTTACAAGAAACGCCAAGATAATCTCCGAAGAACTCAGTATGGGTACAACACAAGAACTACTATGATTTGA

Protein sequence

MVHQWRTLLFSLLFLSLHTHFVVSADPPSPSPSPQLPADSDSLSPSPISLPPSPTSSPPLSQQPSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQEQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo07898.1	Spo07898.1	mRNA

Homology

[Close]

BLAST of Spo07898.1 vs. NCBI nr
Match: gi|902195503|gb|KNA12847.1| (hypothetical protein SOVF_121990 [Spinacia oleracea])

HSP 1 Score: 314.7 bits (805), Expect = 1.000e-82
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1


		  
Query: 1   MVHQWRTLLFSLLFLSLHTHFVVSADPPSPSPSPQLPADSDSLSPSPISLPPSPTSSPPL 60
           MVHQWRTLLFSLLFLSLHTHFVVSADPPSPSPSPQLPADSDSLSPSPISLPPSPTSSPPL
Sbjct: 1   MVHQWRTLLFSLLFLSLHTHFVVSADPPSPSPSPQLPADSDSLSPSPISLPPSPTSSPPL 60

Query: 61  SQQPSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQ 120
           SQQPSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQ
Sbjct: 61  SQQPSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQ 120

Query: 121 EQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 176
           EQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI
Sbjct: 121 EQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 175

[Close]

BLAST of Spo07898.1 vs. NCBI nr
Match: gi|731356215|ref|XP_010689555.1| (PREDICTED: vegetative cell wall protein gp1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 128.6 bits (322), Expect = 1.000e-26
Identity = 97/177 (54.80%), Postives = 113/177 (63.84%), Query Frame = 1


		  
Query: 8   LLFSLLFLSLHTHFVVSADPPSPSPSP--QLPAD---SDSLSPSPIS---LPPSPTSSPP 67
           + FSLLFLS++ H   S DPPSPSPSP  Q PAD   S + SPSP+S   LPPS   SPP
Sbjct: 6   IFFSLLFLSINYHLASSTDPPSPSPSPSSQFPADSIPSPASSPSPLSDITLPPS--VSPP 65

Query: 68  LSQQPSDIASPPSSSSPSPSPSHDAVSD-SPSPATLPESDSSPSPSTAPSSAADEVAKVQ 127
           L           S+ SPSPSP+   VSD + SP   P S  +P+P  A  + A EV K  
Sbjct: 66  LGSN--------SNLSPSPSPADSPVSDIAVSPPPSPSSSPAPAPDAADDAFAAEV-KSN 125

Query: 128 SQEQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 176
           +Q++  S GMSGGHKAGV  GV+  V  VG  GW+YKKRQDNLRRTQYGYN RTTMI
Sbjct: 126 AQKESSSGGMSGGHKAGVAFGVIGAVCVVGVGGWIYKKRQDNLRRTQYGYNARTTMI 171

[Close]

BLAST of Spo07898.1 vs. NCBI nr
Match: gi|595830114|ref|XP_007206005.1| (hypothetical protein PRUPE_ppa012336mg [Prunus persica])

HSP 1 Score: 98.2 bits (243), Expect = 1.500e-17
Identity = 85/172 (49.42%), Postives = 101/172 (58.72%), Query Frame = 1


		  
Query: 12  LLFLSLHTHFVVSADPP--SPSPSPQLPADSDS------LSPSPISLPPSPTSSPPLSQQ 71
           L FL +    V S+ PP  SP+PSPQ  ADS S       SPSPISLPPSP+++P  S  
Sbjct: 13  LAFLLVQFSIVSSSSPPRPSPTPSPQPAADSPSPKSPSTKSPSPISLPPSPSNAPVNSPH 72

Query: 72  PSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQEQK 131
           PS   +PP SS PS SPS D     PSPA    SD + S   A    A          + 
Sbjct: 73  PSSPPAPPQSS-PSQSPSADDTPPVPSPAPSNPSDVNHSDVNADGDGA----------KN 132

Query: 132 PSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 176
            S GMS G KAGVV+GV+VGV  VG AG+VYKKRQDN+RR+QYGY  R  ++
Sbjct: 133 SSGGMSPGKKAGVVLGVIVGVGVVGLAGFVYKKRQDNVRRSQYGYAARREIL 173

[Close]

BLAST of Spo07898.1 vs. NCBI nr
Match: gi|645217385|ref|XP_008225606.1| (PREDICTED: vegetative cell wall protein gp1-like [Prunus mume])

HSP 1 Score: 95.9 bits (237), Expect = 7.500e-17
Identity = 81/165 (49.09%), Postives = 98/165 (59.39%), Query Frame = 1


		  
Query: 12  LLFLSLHTHFVVSADPPSPSPSPQ-LPADSDSLSPSPISLPPSPTSSPPLSQQPSDIASP 71
           L FL +    V S+ PP PSP+P   PA   + SPSPISLPPSP+++P  S  PS   +P
Sbjct: 13  LAFLLVQFSIVSSSSPPQPSPTPSPQPA---AASPSPISLPPSPSNAPVNSPHPSSPPAP 72

Query: 72  PSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQEQKPSSGMSG 131
           P SS PS SPS D     PSPA    SD + S   A    A          +  S GMS 
Sbjct: 73  PQSS-PSDSPSADDTPTVPSPAPSNPSDVNHSDVNADGDGA----------KNSSGGMSP 132

Query: 132 GHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 176
           G KAGVV+GV+VGV  VG AG+VYKKRQDN+RR+QYGY  R  ++
Sbjct: 133 GKKAGVVLGVIVGVGVVGLAGFVYKKRQDNVRRSQYGYAARREIL 163

[Close]

BLAST of Spo07898.1 vs. NCBI nr
Match: gi|694382098|ref|XP_009367083.1| (PREDICTED: classical arabinogalactan protein 4 [Pyrus x bretschneideri])

HSP 1 Score: 90.5 bits (223), Expect = 3.100e-15
Identity = 80/175 (45.71%), Postives = 102/175 (58.29%), Query Frame = 1


		  
Query: 8   LLFSLLFLSLHTHFVVSADP-PSPSPSPQLPADSDSL-SPSPISLPPSPTSSPPLSQQPS 67
           LL + L +   T    S+ P PSP+PSPQ  AD+ S  SPSPISLPPSP+++P  S  PS
Sbjct: 11  LLLAFLLVQFSTAVSSSSPPEPSPTPSPQTGADAPSPPSPSPISLPPSPSNAPADSPIPS 70

Query: 68  DIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPS-PSTAPSSAAD----EVAKVQSQ 127
              +PP S+ PSPSP                 DS PS PS+APS  +D     +      
Sbjct: 71  SPPAPPHST-PSPSP-----------------DSEPSVPSSAPSVPSDINHNNINADGDG 130

Query: 128 EQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 176
           E+    GMS G KAG+  GV+VGV+ VG  G+VYKKRQDN+RR+QYGY  R  ++
Sbjct: 131 EEFSEGGMSTGKKAGIAFGVIVGVSLVGLGGFVYKKRQDNVRRSQYGYAARREIL 167

[Close]

BLAST of Spo07898.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R215_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121990 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 7.100e-83
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1


		  
Query: 1   MVHQWRTLLFSLLFLSLHTHFVVSADPPSPSPSPQLPADSDSLSPSPISLPPSPTSSPPL 60
           MVHQWRTLLFSLLFLSLHTHFVVSADPPSPSPSPQLPADSDSLSPSPISLPPSPTSSPPL
Sbjct: 1   MVHQWRTLLFSLLFLSLHTHFVVSADPPSPSPSPQLPADSDSLSPSPISLPPSPTSSPPL 60

Query: 61  SQQPSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQ 120
           SQQPSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQ
Sbjct: 61  SQQPSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQ 120

Query: 121 EQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 176
           EQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI
Sbjct: 121 EQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 175

[Close]

BLAST of Spo07898.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BKY8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g207990 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.200e-27
Identity = 97/177 (54.80%), Postives = 113/177 (63.84%), Query Frame = 1


		  
Query: 8   LLFSLLFLSLHTHFVVSADPPSPSPSP--QLPAD---SDSLSPSPIS---LPPSPTSSPP 67
           + FSLLFLS++ H   S DPPSPSPSP  Q PAD   S + SPSP+S   LPPS   SPP
Sbjct: 6   IFFSLLFLSINYHLASSTDPPSPSPSPSSQFPADSIPSPASSPSPLSDITLPPS--VSPP 65

Query: 68  LSQQPSDIASPPSSSSPSPSPSHDAVSD-SPSPATLPESDSSPSPSTAPSSAADEVAKVQ 127
           L           S+ SPSPSP+   VSD + SP   P S  +P+P  A  + A EV K  
Sbjct: 66  LGSN--------SNLSPSPSPADSPVSDIAVSPPPSPSSSPAPAPDAADDAFAAEV-KSN 125

Query: 128 SQEQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 176
           +Q++  S GMSGGHKAGV  GV+  V  VG  GW+YKKRQDNLRRTQYGYN RTTMI
Sbjct: 126 AQKESSSGGMSGGHKAGVAFGVIGAVCVVGVGGWIYKKRQDNLRRTQYGYNARTTMI 171

[Close]

BLAST of Spo07898.1 vs. UniProtKB/TrEMBL
Match: M5W0G1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012336mg PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.000e-17
Identity = 85/172 (49.42%), Postives = 101/172 (58.72%), Query Frame = 1


		  
Query: 12  LLFLSLHTHFVVSADPP--SPSPSPQLPADSDS------LSPSPISLPPSPTSSPPLSQQ 71
           L FL +    V S+ PP  SP+PSPQ  ADS S       SPSPISLPPSP+++P  S  
Sbjct: 13  LAFLLVQFSIVSSSSPPRPSPTPSPQPAADSPSPKSPSTKSPSPISLPPSPSNAPVNSPH 72

Query: 72  PSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQEQK 131
           PS   +PP SS PS SPS D     PSPA    SD + S   A    A          + 
Sbjct: 73  PSSPPAPPQSS-PSQSPSADDTPPVPSPAPSNPSDVNHSDVNADGDGA----------KN 132

Query: 132 PSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 176
            S GMS G KAGVV+GV+VGV  VG AG+VYKKRQDN+RR+QYGY  R  ++
Sbjct: 133 SSGGMSPGKKAGVVLGVIVGVGVVGLAGFVYKKRQDNVRRSQYGYAARREIL 173

[Close]

BLAST of Spo07898.1 vs. UniProtKB/TrEMBL
Match: A0A067L9Y8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05525 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.100e-14
Identity = 83/173 (47.98%), Postives = 103/173 (59.54%), Query Frame = 1


		  
Query: 9   LFSLLFLSLHTHFVVSADPP-SPSPSPQLPADSDSLS-PSPI------SLPP--SPTSSP 68
           L S +   L     +SA PP SPSPS  L ADS SLS PSP       SLPP  SP SSP
Sbjct: 6   LVSAILAFLCIQIALSATPPESPSPSSDLEADSPSLSPPSPSPESGSPSLPPTDSPISSP 65

Query: 69  PLSQQPSDIASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAPSSAAD----EV 128
           P +  PSD+ SP SS +P+ S  +  V  SPSPA        P+P+ AP+  +D    + 
Sbjct: 66  P-APPPSDLLSPGSSPAPALSLENSTV-PSPSPA--------PAPAPAPAEVSDINHSDN 125

Query: 129 AKVQSQEQKPSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYG 168
            +   +E+K SSGMSGG KAG+ VGV+V    VG  G VYKKRQDN+RR++YG
Sbjct: 126 VEAGGEEEKGSSGMSGGKKAGIAVGVIVAAGVVGLGGLVYKKRQDNIRRSRYG 168

[Close]

BLAST of Spo07898.1 vs. UniProtKB/TrEMBL
Match: A0A067DGZ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031492mg PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.200e-13
Identity = 78/172 (45.35%), Postives = 98/172 (56.98%), Query Frame = 1


		  
Query: 7   TLLFSLLFLSLHTHFVVSADPPSPSPSPQLPADSDSLSPSPISLPPSPTSSPPLSQQPSD 66
           TL+   L LSLH  +VVS D  SP+PSP+ PADS + SP P+S+  SP  +P +S   S 
Sbjct: 5   TLICFCLLLSLH--YVVSLD--SPAPSPEHPADSPAPSPGPVSV--SPHHAPEISSISSP 64

Query: 67  IASPPSSSSPSPSPSHDAVSDSPSPATLPESDSSPSPSTAP---SSAADEVAKVQSQEQK 126
            A PPS  S +PSPS  A S  P+PA    SD + S   A    SS  D+          
Sbjct: 65  PAPPPSDLSSAPSPSPPAPSPDPAPAPAEVSDLNHSNINADGVGSSGGDD---------- 124

Query: 127 PSSGMSGGHKAGVVVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNTRTTMI 176
              GMSGG KAG+ +GV++    V   G VYKKRQDN+RR QYGY  RT ++
Sbjct: 125 --GGMSGGKKAGIALGVILVACVVVVGGLVYKKRQDNIRRAQYGYAARTELL 158

[Close]

BLAST of Spo07898.1 vs. TAIR (Arabidopsis)
Match: AT3G45230.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 61.2 bits (147), Expect = 7.200e-10
Identity = 62/147 (42.18%), Postives = 75/147 (51.02%), Query Frame = 1


		  
Query: 25  ADPPSPSPSPQLPADSDSLSPSPISLPPSPTSSPPLSQQPSDIASPPSSSSPSPSPSHDA 84
           A+ P    SP  P    S SPSP +   SP+ SPPL   P+D  SP SS+SPSPSP    
Sbjct: 54  AESPIEYSSPPEPETEHSPSPSPAN---SPSVSPPL---PNDSQSPSSSASPSPSPEASD 113

Query: 85  VSDSPSPATLPESDSSPSPSTAPSSAADEVAKVQSQEQKPSSGMSGGHKAGVVVGVMVGV 144
           V+ S    T  E +  PS S                      GMSGG K GV  G +  V
Sbjct: 114 VNHSD--ITGIEGEKLPSGS--------------------GGGMSGGKKVGVAFGAIAAV 172

Query: 145 AAVGCAGWVYKKRQDNLRRTQYGYNTR 172
             VG AG+VYKKRQ+N+RR++YGY  R
Sbjct: 174 CVVGVAGFVYKKRQENIRRSRYGYAAR 172

[Close]

BLAST of Spo07898.1 vs. TAIR (Arabidopsis)
Match: AT2G28440.1 (proline-rich family protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.400e-8
Identity = 59/154 (38.31%), Postives = 79/154 (51.30%), Query Frame = 1


		  
Query: 27  PPSPSP---SPQLPADSDSLSPSPISLPPSPTSSPPLSQQPSDIASPPSSSSPSPSPSHD 86
           PPS SP   SPQ PA S    P P SL  SP+  PP  Q  S  +      +P P+PS D
Sbjct: 118 PPSSSPEANSPQSPASS----PKPESLADSPSPPPPPPQPESPSSPSYPEPAPVPAPSDD 177

Query: 87  AVSDSPSPATLPESDSSPSPSTAPS-------SAADEVAKVQSQEQKPSSGMSGGHKAGV 146
              D P P    E++  PSP+ +P         A+D   +  + E+    GMSG  KAG+
Sbjct: 178 DSDDDPEP----ETEYFPSPAPSPELGMAQDIKASDAAGEELNDERGEDYGMSGLEKAGI 237

Query: 147 VVGVMVGVAAVGCAGWVYKKRQDNLRRTQYGYNT 171
            +G ++GV A+     VYKKR+DN+ R +Y Y T
Sbjct: 238 AIGTILGVGAIVIGALVYKKRRDNMTRARYTYFT 263

The following BLAST results are available for this feature:

BLAST of Spo07898.1 vs. NCBI nr
BLAST of Spo07898.1 vs. UniProtKB/TrEMBL
BLAST of Spo07898.1 vs. ExPASy Swiss-Prot
BLAST of Spo07898.1 vs. TAIR (Arabidopsis)

BLAST of Spo07898.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902195503\|gb\|KNA12847.1\|	1.0e-82	100.	hypothetical protein SOVF_1219...	[more]
gi\|731356215\|ref\|XP_010689555.1\|	1.0e-26	54.8	PREDICTED: vegetative cell wal...	[more]
gi\|595830114\|ref\|XP_007206005.1\|	1.5e-17	49.4	hypothetical protein PRUPE_ppa...	[more]
gi\|645217385\|ref\|XP_008225606.1\|	7.5e-17	49.0	PREDICTED: vegetative cell wal...	[more]
gi\|694382098\|ref\|XP_009367083.1\|	3.1e-15	45.7	PREDICTED: classical arabinoga...	[more]

BLAST of Spo07898.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R215_SPIOL	7.1e-83	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BKY8_BETVU	7.2e-27	54.8	Uncharacterized protein OS=Bet...	[more]
M5W0G1_PRUPE	1.0e-17	49.4	Uncharacterized protein OS=Pru...	[more]
A0A067L9Y8_JATCU	4.1e-14	47.9	Uncharacterized protein OS=Jat...	[more]
A0A067DGZ3_CITSI	1.2e-13	45.3	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo07898.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo07898.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G45230.1	7.2e-10	42.1	hydroxyproline-rich glycoprote...	[more]
AT2G28440.1	1.4e-8	38.3	proline-rich family protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0009409	response to cold
biological_process	GO:0051707	response to other organism
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006564	L-serine biosynthetic process
biological_process	GO:0006544	glycine metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005840	ribosome
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0032991	protein-containing complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0004617	phosphoglycerate dehydrogenase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo07928	0.74	Barchart \| Table
Spo02706	0.73	Barchart \| Table
Spo07610	0.72	Barchart \| Table
Spo14697	0.71	Barchart \| Table
Spo07393	0.71	Barchart \| Table
Spo10461	0.70	Barchart \| Table
Spo18304	0.70	Barchart \| Table
Spo12742	0.69	Barchart \| Table
Spo08599	0.69	Barchart \| Table
Spo05752	0.69	Barchart \| Table
Spo15150	0.68	Barchart \| Table
Spo12064	0.68	Barchart \| Table
Spo24475	0.68	Barchart \| Table
Spo16806	0.68	Barchart \| Table
Spo08488	0.68	Barchart \| Table
Spo03345	0.68	Barchart \| Table
Spo05547	0.68	Barchart \| Table
Spo27210	0.67	Barchart \| Table
Spo03105	0.67	Barchart \| Table
Spo08768	0.67	Barchart \| Table
Spo09093	0.67	Barchart \| Table
Spo09802	0.67	Barchart \| Table
Spo16288	0.67	Barchart \| Table
Spo21542	0.67	Barchart \| Table
Spo23218	0.67	Barchart \| Table
Spo26736	0.67	Barchart \| Table
Spo01096	0.67	Barchart \| Table
Spo17929	0.66	Barchart \| Table
Spo06115	0.66	Barchart \| Table
Spo19007	0.66	Barchart \| Table
Spo19157	0.66	Barchart \| Table
Spo19500	0.66	Barchart \| Table
Spo20161	0.66	Barchart \| Table
Spo13835	0.66	Barchart \| Table
Spo10705	0.66	Barchart \| Table
Spo25099	0.66	Barchart \| Table
Spo26851	0.66	Barchart \| Table
Spo06061	0.66	Barchart \| Table
Spo25351	0.65	Barchart \| Table
Spo09563	0.65	Barchart \| Table
Spo07451	0.65	Barchart \| Table