Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTGAAGCAACCACTTGACTTCTAAACCTTCAAAACCTCTAAGTTTCTCTCTCCTCTCTCTCTAACTCTCTTCCTACAATGGAGGTCCAACAAAAAACCCTAAACCTTACTTCCACCTCAAATACAATCAAATTTCTATGCAGCTATGGCGGAAAAATTCTCCCTCGTCCTTCTGATGGTCAACTTCGTTACGTCGGCGGCCTCACTCGCGTTGTCTCCGTTCATCGTTCCATATCCTTCTCCGGTGAGCCTCTTTTTCTCTCTTAATATCGCGTTTTCTGTATCGAAATTTTCAAGTTTTGTTCAATCTGTGTCGATTTGAAGGTTCTAGAACTGATGGATTAAGCGTTTTTTGGTTGATTTTACAGAATTAATGACGAAGCTCGAGAATCTATGCGGTTATTCTGTGAGTCTCCGATGTCAGCTACCGAGCGAAGATCTCGATGTTCTAATTTCGATCAAATCCGACGACGATCTCGTCAATGTATTCGAAGAATACAACAGAGCGTCGTCGATTTCCGGTAAAGAGTTGAAGGTCAGAGCAATTCTATCACCTCCAAAAACCTCGTTCTCAACGTCACCAGCTTCATCTTCTTCGTCGTCGTGTTCTGGCGCTGATCTCTCTCCTACAAACGGCGATCGTCACAGATTTGTCAACCATAGACCACCGTTGCCAGCTGTTCGACGACCTTCTCCACCAGCGAGAAGAGTTCCATACGGTGTCGTTCGGGATTGCTACTACTACCATCCTTGCCATATTCAAGCCAATTTTCGGCCTTCTTCATACTTCATCCAACAATCAAATCGTTTGCACTAAATTATTTTTCAATAAAACAATATTATTTTCCTCCCTTAAATTTCTGAAGTAATTAAACAATATATACAGAGTAAATTTTTTTGGCAATATGATCAAACGTTAAAAAAAATATATTAATCGGCCTTTATAGTTTTTGTATGGGGTCAATGTAATTAGTTCTGTAAAATATAGTAGCAGCAAGTTCTGTGTATACTACTGAGAATCCGGAGTTGTTGAAATTCGATTGCTCAATCCCTATATTTTTCCGGTGGTTCTCAGATTCTAATGCCTATTTTTTTTGGCCTTGGATTTTTTGGAATTTGGACCCCTCAATTTTAGCCAATTTAGGGTTTTCGTTTTTTTTCTTCTTTTGTGTGGTTAAGCGATTTAATCGCAAATTCCACTACTCCGTAATTAAAACTACCACGTATGCCCTGTGTGTGTTGTGTCTTGTGTTGTTGTGTGTGTGAGTGTTTTTTTTTATTTTAAAATAAATATTTTGGCCTTATTGTATAGTACTCCGTATATATATTATGTATATGTATGTAGTATACGTATTATGTGTGTATGTGTATTGTGTGTAGCGTAGTGTATTGTGTCCGTGTAGTGTACTTCATATGTGTATGTGTATTGTGTGTTTTGTGTATGTCCTGTTTGGGTTACTACATGGTTTGGTTGATCATTTGTTATGAATTTATTCTAAAATAGTCGATTCTGTATTTGATCATTCATATGAAGGTGCATTACTAATTTCTTTGTTATTTCCTTGATTATTGCAGGTCAAAAAGGGCAGAAGACATTGTAATGATTCTATTTCTATACAGCTGAAATATTGTTGGACTGCACTTAATGAATTATGACTAAACCCCGAAACTTACGCAAAGTGATAATGACGTTTCTAAACTAATCAACAAATGGACAAATTATTTATTATTCCTATTCCTAGGAATAATGAAAAAACAAATGACGAAATAGTGATGAAAGAAAAAGCAAAATAAAACAAAGAAGATGGCAAGTGGAAATGGGCCTGGGCTTTGGTGGGCCTTCAATGATGGAGATAAGGATATGATCCGCACTTGTGACGTTAAGTTTGGGTCCCTTGGCAATAAAATTAAGGGAATACTTGAACAGTTTTGGGAAAAGGTTAGTTATGCGGCCTCAATGTGGACGTGTCAACCATAATGTGGGACCCATTTCATACGATTGAGTTGAATGGTGTATAAGATAAGATTGAAAGGGGGCTAACAAATATGGGACCATGGCTTTCTGGCTATTGTTAGAGGCAGAGAGAGATTACATTAGTATCCATTGTCAACCATATGGAACACTCCATTCGTTTTTAAAAGATTGCTCCATTTTCTATTTATTTAAATTCCAATTTACATAAACTTTCTTCACCTATTTACAGTGAAGAATTTCACATACTAATACGCAAATCACTTGATGTAACTTTTATAAAGCAAAAATAAAAATGGATCAATCTGTAAAGACACTAGAGACTAATTTGGTTGATATTTTAATACACGAGAAGTCTCATTTATTTCCTAGGAAGTGAAG GGTTTGAAGCAACCACTTGACTTCTAAACCTTCAAAACCTCTAAGTTTCTCTCTCCTCTCTCTCTAACTCTCTTCCTACAATGGAGGTCCAACAAAAAACCCTAAACCTTACTTCCACCTCAAATACAATCAAATTTCTATGCAGCTATGGCGGAAAAATTCTCCCTCGTCCTTCTGATGGTCAACTTCGTTACGTCGGCGGCCTCACTCGCGTTGTCTCCGTTCATCGTTCCATATCCTTCTCCGAATTAATGACGAAGCTCGAGAATCTATGCGGTTATTCTGTGAGTCTCCGATGTCAGCTACCGAGCGAAGATCTCGATGTTCTAATTTCGATCAAATCCGACGACGATCTCGTCAATGTATTCGAAGAATACAACAGAGCGTCGTCGATTTCCGGTAAAGAGTTGAAGGTCAGAGCAATTCTATCACCTCCAAAAACCTCGTTCTCAACGTCACCAGCTTCATCTTCTTCGTCGTCGTGTTCTGGCGCTGATCTCTCTCCTACAAACGGCGATCGTCACAGATTTGTCAACCATAGACCACCGTTGCCAGCTGTTCGACGACCTTCTCCACCAGCGAGAAGAGTTCCATACGGTGTCGTTCGGGATTGCTACTACTACCATCCTTGCCATATTCAAGCCAATTTTCGGCCTTCTTCATACTTCATCCAACAATCAAATCGTTTGCACTAAATTATTTTTCAATAAAACAATATTATTTTCCTCCCTTAAATTTCTGAAGTAATTAAACAATATATACAGAGTAAATTTTTTTGGCAATATGATCAAACGTTAAAAAAAATATATTAATCGGCCTTTATAGTTTTTGTATGGGGTCAATGTAATTAGTTCTGTAAAATATAGTAGCAGCAAGTTCTGTGTATACTACTGAGAATCCGGAGTTGTTGAAATTCGATTGCTCAATCCCTATATTTTTCCGGTCAAAAAGGGCAGAAGACATTGTAATGATTCTATTTCTATACAGCTGAAATATTGTTGGACTGCACTTAATGAATTATGACTAAACCCCGAAACTTACGCAAAGTGATAATGACGTTTCTAAACTAATCAACAAATGGACAAATTATTTATTATTCCTATTCCTAGGAATAATGAAAAAACAAATGACGAAATAGTGATGAAAGAAAAAGCAAAATAAAACAAAGAAGATGGCAAGTGGAAATGGGCCTGGGCTTTGGTGGGCCTTCAATGATGGAGATAAGGATATGATCCGCACTTGTGACGTTAAGTTTGGGTCCCTTGGCAATAAAATTAAGGGAATACTTGAACAGTTTTGGGAAAAGGTTAGTTATGCGGCCTCAATGTGGACGTGTCAACCATAATGTGGGACCCATTTCATACGATTGAGTTGAATGGTGTATAAGATAAGATTGAAAGGGGGCTAACAAATATGGGACCATGGCTTTCTGGCTATTGTTAGAGGCAGAGAGAGATTACATTAGTATCCATTGTCAACCATATGGAACACTCCATTCGTTTTTAAAAGATTGCTCCATTTTCTATTTATTTAAATTCCAATTTACATAAACTTTCTTCACCTATTTACAGTGAAGAATTTCACATACTAATACGCAAATCACTTGATGTAACTTTTATAAAGCAAAAATAAAAATGGATCAATCTGTAAAGACACTAGAGACTAATTTGGTTGATATTTTAATACACGAGAAGTCTCATTTATTTCCTAGGAAGTGAAG ATGGAGGTCCAACAAAAAACCCTAAACCTTACTTCCACCTCAAATACAATCAAATTTCTATGCAGCTATGGCGGAAAAATTCTCCCTCGTCCTTCTGATGGTCAACTTCGTTACGTCGGCGGCCTCACTCGCGTTGTCTCCGTTCATCGTTCCATATCCTTCTCCGAATTAATGACGAAGCTCGAGAATCTATGCGGTTATTCTGTGAGTCTCCGATGTCAGCTACCGAGCGAAGATCTCGATGTTCTAATTTCGATCAAATCCGACGACGATCTCGTCAATGTATTCGAAGAATACAACAGAGCGTCGTCGATTTCCGGTAAAGAGTTGAAGGTCAGAGCAATTCTATCACCTCCAAAAACCTCGTTCTCAACGTCACCAGCTTCATCTTCTTCGTCGTCGTGTTCTGGCGCTGATCTCTCTCCTACAAACGGCGATCGTCACAGATTTGTCAACCATAGACCACCGTTGCCAGCTGTTCGACGACCTTCTCCACCAGCGAGAAGAGTTCCATACGGTGTCGTTCGGGATTGCTACTACTACCATCCTTGCCATATTCAAGCCAATTTTCGGCCTTCTTCATACTTCATCCAACAATCAAATCGTTTGCACTAA MEVQQKTLNLTSTSNTIKFLCSYGGKILPRPSDGQLRYVGGLTRVVSVHRSISFSELMTKLENLCGYSVSLRCQLPSEDLDVLISIKSDDDLVNVFEEYNRASSISGKELKVRAILSPPKTSFSTSPASSSSSSCSGADLSPTNGDRHRFVNHRPPLPAVRRPSPPARRVPYGVVRDCYYYHPCHIQANFRPSSYFIQQSNRLH Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07912.1 vs. NCBI nr
Match: gi|902205772|gb|KNA15263.1| (hypothetical protein SOVF_099770 [Spinacia oleracea]) HSP 1 Score: 393.7 bits (1010), Expect = 2.000e-106 Identity = 200/204 (98.04%), Postives = 200/204 (98.04%), Query Frame = 1
BLAST of Spo07912.1 vs. NCBI nr
Match: gi|731335719|ref|XP_010678864.1| (PREDICTED: uncharacterized protein LOC104894347 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 286.2 bits (731), Expect = 4.500e-74 Identity = 150/209 (71.77%), Postives = 168/209 (80.38%), Query Frame = 1
BLAST of Spo07912.1 vs. NCBI nr
Match: gi|595848717|ref|XP_007209584.1| (hypothetical protein PRUPE_ppa011220mg [Prunus persica]) HSP 1 Score: 172.2 bits (435), Expect = 9.500e-40 Identity = 107/200 (53.50%), Postives = 128/200 (64.00%), Query Frame = 1
BLAST of Spo07912.1 vs. NCBI nr
Match: gi|645267980|ref|XP_008239324.1| (PREDICTED: uncharacterized protein LOC103337931 [Prunus mume]) HSP 1 Score: 169.1 bits (427), Expect = 8.100e-39 Identity = 104/194 (53.61%), Postives = 125/194 (64.43%), Query Frame = 1
BLAST of Spo07912.1 vs. NCBI nr
Match: gi|449440620|ref|XP_004138082.1| (PREDICTED: uncharacterized protein LOC101222072 [Cucumis sativus]) HSP 1 Score: 167.9 bits (424), Expect = 1.800e-38 Identity = 100/187 (53.48%), Postives = 125/187 (66.84%), Query Frame = 1
BLAST of Spo07912.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6X6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099770 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.400e-106 Identity = 200/204 (98.04%), Postives = 200/204 (98.04%), Query Frame = 1
BLAST of Spo07912.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CAQ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g118070 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 3.200e-74 Identity = 150/209 (71.77%), Postives = 168/209 (80.38%), Query Frame = 1
BLAST of Spo07912.1 vs. UniProtKB/TrEMBL
Match: M5WNC6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011220mg PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 6.600e-40 Identity = 107/200 (53.50%), Postives = 128/200 (64.00%), Query Frame = 1
BLAST of Spo07912.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LNT0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002940 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.300e-38 Identity = 100/187 (53.48%), Postives = 125/187 (66.84%), Query Frame = 1
BLAST of Spo07912.1 vs. UniProtKB/TrEMBL
Match: A0A061FTW4_THECC (Octicosapeptide/Phox/Bem1p family protein OS=Theobroma cacao GN=TCM_012220 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.800e-38 Identity = 102/181 (56.35%), Postives = 124/181 (68.51%), Query Frame = 1
BLAST of Spo07912.1 vs. TAIR (Arabidopsis)
Match: AT3G48240.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 152.9 bits (385), Expect = 2.100e-37 Identity = 87/154 (56.49%), Postives = 102/154 (66.23%), Query Frame = 1
BLAST of Spo07912.1 vs. TAIR (Arabidopsis)
Match: AT5G63130.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 143.3 bits (360), Expect = 1.700e-34 Identity = 91/194 (46.91%), Postives = 117/194 (60.31%), Query Frame = 1
BLAST of Spo07912.1 vs. TAIR (Arabidopsis)
Match: AT1G70640.1 (octicosapeptide/Phox/Bem1p (PB1) domain-containing protein) HSP 1 Score: 123.6 bits (309), Expect = 1.400e-28 Identity = 68/139 (48.92%), Postives = 98/139 (70.50%), Query Frame = 1
BLAST of Spo07912.1 vs. TAIR (Arabidopsis)
Match: AT5G64430.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 107.1 bits (266), Expect = 1.300e-23 Identity = 63/156 (40.38%), Postives = 83/156 (53.21%), Query Frame = 1
BLAST of Spo07912.1 vs. TAIR (Arabidopsis)
Match: AT1G04700.1 (PB1 domain-containing protein tyrosine kinase) HSP 1 Score: 107.1 bits (266), Expect = 1.300e-23 Identity = 52/111 (46.85%), Postives = 77/111 (69.37%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07912.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07912.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07912.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo07912.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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