Spo07913 (gene) | SpinachBase

Overview


Name	Spo07913
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Nucleic acid-binding, OB-fold-like protein
Location	chr5 : 7248243 .. 7257650 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCAATATCCATTGATTATGTTTCCATTGCTCCCGCCAGTAGGTTTGGTGGAACGGTGGTGTTCGGAGAGATTGTGAGGGATAATATGGGCGGAGGGAGAAAGAATTTGAAGAGGGAAGTGGAAGATGACGGCTTAACTCTCCAATTAGGTCAAAGTATTATGCAAGTCGTGTCGCTTCGAGGTTCTAATCTTATTGAGGTAATAATAATGTGTTCTCATTTGCTTATTGAATTTGTTAAATTTATTTCGAATGTTTGTTTTGTTTTGTTGGGGGTGTAATTTTGTGGAGATTATCTACCATTGAAAGGGTTTAAAGTTTAATGCTTTGTTGATATGGAAGCTAACAATTTTAGTTTTAGGGTATGAGAGTTGAGTAATCTCACTATTTCTGCCCGTTCTTTGGAAATGACTATCTTTGTTGGGATATTGTGGAATACATGAATTAGCTATAGAGCGTTGAATTACTTTACAAGTTTTAAGGGTTTGATGACTTTAAAATCCACAATTACTTGATTCGCTAGAATGTGACTGGGTACGGGTTAGCAATTCGCCACCTAGTTTGTTAAATCAGACCATAAACATACCATTCTTATGTTATATTTGGCTTTTACGGTTCGCAGTTTGTAGGGTGATTAGGGAATTAGGTAGCACTGCTTTAGTCTCTTGCTATAGAGTGCCAACGTATACACTCTTCTCACCTGTTCTATAGCTGTATCTTATTCTTCAGAACTTTAAGAAGCCTTAGCCTGTGTTCAACACTTCAGCTTATAAATTTTTAGTGGATAACATGATAGGGATTCGTAGATGATTCACTGAAGTAGTCCTCTTCACACTTTGTCTTTTGCGGCGGAGTTGTCTTTCATAGTTTCACTAGGTTAGTGCCCGTGCGATGTACGTTTGTAAATTTTTTATTATTTTTTACATTATTTTTGTGTGAAACTAAATGTTTAAACTTGATTAGAACAAGATGGTATTTGAAAAAGTGAAGTCAATTGTTTGTTACAAACTTACAAACATTATCACATGCCATTTGAAATGGAAAGTTTGAACCGCTGCTAGTCAGCTTTTATTTTTTTAATAACAAATTAATTTCATGGATAAAAATCATACATGTATATAACCATTAGTCAACTTAAAAAAAACATCCACACGATAAAATAACAAAAGAAATAAGACGCAATAGATTTTCTTTATCTGCCAACTAAAATATTTCAGTAATCCACATACTCTGCATGTCCATGGATGACTGTTTGGATGCCCTGCACTGTTATAGCCAGATAAGGACATTCTTCAATAACTCTAAAGTAGACAAACCTGTAAAGAAACTCTTTAATGACCATGGATGGCTAAATGAAATGCACACTAATAGTTTTCTTAGATCATGTATCAGAATACCTATTACAAAGTCAACAAAATTTAGAGAAACATCTTTTTAAAGATATCGTGAATGCAGTTAGATACTTGTGGCATATAGATGATTTTTTGGGGTTTCTACAAAATGCAAAGCAAAAGTAACAACAATTCAATGGAAGCATTAAACAAATAGGTCAATGATTTCGCAAGATATACTATGCCATGAAACTGGAGACCAAAGTGGGACTAACCAAGAGTGACAAAGGAAGAAAAAAATATTCAAACACCAAATAAAAAGGAATAAAAATTGTTTATGTTTCAAAATTTTAAAATAAGTTATTAAATTAATTGTACTAATTATCAACACCAACACCATCCATGTCACTGAACTCTGAAAGCAAGCCAATTGATTGAAGTTTTACCTTTAAGAATTAAGGTACATATAACTATATAAGCCATCCAAATCAAACAATTCCATTTTACTCTACAATTTAAGCTTGTTTTTAAACATTGGTTACAATAAATTAAGGGAGGCCACAATTTAATCAATTCAACACTGATTTTCTCTTTTAAAACAAATTTATCGTTAGCTTTCTCATTAATTGAGATAGAGCAAGGAAGAAAGGAGATAATTTTCTACTCAAATTTTCTGAAAAAACTAAATACGATAAAGAGTGAATAGCAATTATCATATTTAATTATCAAATTTAATAACAATTATAGTACCATTAAACTGACCCTAATTAAAACCGCAAAATCAAAATAAAAACATTAGGCTAAAGGAAATGTTGACCCCAATTGACATCTCCGTAATCCTTGTCGCCGACGTCGTTTGACTTTCACCATCCTTAGACTCCACAACAATTTTCAAAATTAAGAATCTTATAGCATAACCAAAACAGAGGGAAAAAGAGAAGACAAAATTCCGTTTGAATACAACTAAAGCCCCTCAAACATTAAAATTTTATGGAAGCAGTATAAAACATATGTCCCAAATGATATATGTAGAATTGAAACTGGAGTAGATAAAAAGAAAATGGATAAGAAATTATCAGATCTAATAACAATTAGAATAAAATCTAATTAAAAAGTGAAAAAATCAAATAAAAACAATTACTTGAGCGCCTTTTTATCCCTGTTGAAATAATATACATAAGAAATCCAGCTTCTCTCTTTCAATCATTGTGTGAAGATACAATTGAAGAATAGAAGAAAGACCCACTATAAGATGTTTTGGGATTTCAGTTTGGGAATTACATAATAAATGATAGAAGGAAGGATAATAGGACATAATGGAGTGAGAACAGTGAGAAGAAATGAAGAATGCGAAAAAAAAAGTGAACGATCAAATACTTCGCGTTCCGCAACAGTAGTCAATTAAATATTAAAGTTAAAAATAAAAAATAGAAATCTTTTAGCAAAAGGAAGATGACATCACAAGTGAATTAGGCGGGATTTTTTTATATAAAGCCGCCATGTGTATAGTAATGACATCCGCGGTATTTCTTTTAGTAATAGTTCTAGATTTACCAGCTAAAGAAAGCATGGCCCAATAGTTATGATTTTTCTGACATTTGGTATAGTCTATAGACTGCTAGGTCAAAGGTTGCAGTCCTCTACTAGCATGGTTCACAGCTTGTAAAGTCTGATGGTAATGTGGGGAATGGACTTGCAAACTTTGGTTCGTGACCCTTTTTGGTTGTTGTATGTGTTTCAGGTTACAGATGCTGAAGGTGAGAAGTCCTTGGCTCTTTTTCCGGCTAAATTTCAGAAGAGTATGTGGATAAAAAGAGGTTAGTTCGTGAGAATATGAAGAACGTTATATATATCATCTTTTCAGCTGAATTTTCCCCCCTTTTTCTTTAAGGTTTTAGTTGCATTAAATATTGACGAAGTATCATGTTCTCAATGCATAGGGAGTTTTGTCGTAGTAGATGACAGCGCTAAGGTGGAGGCTCTTGAGTCTGGTAGTAAGGTGGGATGTATCGTATCCCAGGTTCTCTTTCATGATAAAGTTAGACGTCTGCAAAAAAGTTCTGACTGGTAAGATCTCACTCCTGTAGATCTCGTTCAGAATTTGTTCTAGATTCAGTTTCTAGTGTTGAGAACATCTTGGTTTGTTTATCTTGTTTTGTTTTGTTTAGTCAAAACAGTTTTATGATGAAGAATTTATTTTGTAATTTGAAGTTATGTCCTTCTATGATGCTATTTATTTAACTTTTACTAAATCTCGTTATCTTGAGGTTATATGTTGAAGCTTCATCAAACTTGTATTTAGTATATTGATAAAGCTTTTGAAAGAGGGATGATGCAACAACTACTGTGGAGTAATTTCTAACCTTCACCAGGTGACAAGTAGGAGTCTAACTAATTGTTGTAGTCAGCCTGATCAAGAAGTCCCCACTTTAAAAATACCTGCGGTCTTACTGCTGGATATACATAAGGGGCAATGAGCAATATAAGGTGTATGCATCTCAAAAGCATTGTCATCTGCTCCCCCAATTCTTCCATAATAGTAAACATCTTTAACCTTTGCCACTGAGAAAAGCTTTTCCAAAGTTCCCCATCAACCTTCTATGAGCTCTACAATATCTCACGTGATCCTTGTTTTCTAGGATATACAGTGTAATAGGGTGTATTATAATTACGTGACTGTTATCAGGGACTCATGTCACTCAGCTGAAAAACTCGGTGGCTATATTTTTTGTAGACAAGTTAGTTGCCCTATATCCTGTTTGCTATCTGCAATTAGCTATTTTATCTGAATTCATCTTTTAAGTTTTAACTTTCTCTTTGAAATCTTTTTATCCAGCTAGCCCCTCTAACTTTTTTACCCCTGATTGTACGAGCTGCTTTTTCCATTGATCCCCCGTAGGCTGCTTTTTCCTCGATTTAAGAATTCTGATTGTTCTAAATGTACTCGCTTTGATTTCTGTGAGCCTCTGAATCCATATGTAGAAGCTTGTTTGTCTTGCTAAATGACACCTTGCCTTACAAATGTTATCTTGCATCTCCAATTGTGGAGGGCTCTTAGTCCATTGTTTTTTCATGATCATTTTTAGCCACAAGCTGATGTGTTCGAGCTTAGGATGCTAGAGTTCTTCTGCCTAATTCGTACTTATTTTTCCACATATTCAGGGGTTGGGGACATTATAGATGGATACTTAAATACTCGCTCTGTCCCTAAAAGATTGCCCCAAATGCTTTTGTTCACTTTATTAAGCATCAAGTACACTCAAAATCAACTGGGTAGGTGAATTTGTTTTTTGTTAGATTAAATAATAGTGTGTGAGGAGAGACACGTGGGGACCTAAACCAAATAAGGTATGGGACAAATAAATAGGGACATCCATTTATGGTATATGGTGCACTTTTTTAGGGACGGATGGAGTACTTTAATAATTGTATATTTCCCTCTCATGAATGAAGAGGATATATGTTTCAGGGCTTGGTACACCTTCCATATCCTTAGGAGTTAGACCTAACTCCATGTAGATCCTCGGTGATAAGTTTTTTTGATACTAAGGTGTTGGTTGCACTGTTATGCAGTTGTGGTTAATAAGGACTAGTAAGAGATTGAGGACTACTGTTTTATTTTGTCATAATAGCTCGTCCTCAGCTGTTGTGGAAATGTGGACTATATAATGTAGCTTCTCCTTGATTGATTTTATTGGATCCTCCTTTGTCCTTAATTCTTTGTTGCCTTTCATTTGATTGGACATTGGACTGTTGGAGTGATCAGAGCTCAAAATCAATTAACTTCGTAATCTAGTAGGGTAGTAAGTTATCACCATAGCAACGAGTGTCATATTAAATTGCGCTTGACATCTCAATCATTAGTGAATTCAGGTGTATTTTTTGTCTTAGAAAAAGTGGTCCTTCTTTCCATGTAAGCTAGACGACAATAGTATTTTCTTATTGTTCTTCTTTCCTTCTTCTCAAGACAGATGATGTAATTTTGTCTTATTTCTTTTTAAAACAATTCTAAGATCTTTTCCTGCCAAAGCTTATCCTCAAATCATTTCTATTATCTCATTTTGGCTGTTCTATGCAGTTGAACAAAAGCTTTTTGCCATAATTATCTTTCGAGTGCATAGCGAGTCAGAGAGTTGAATTAGATAACTTGAAAATGTTGAAACCCAGATTCAAGTTGAATAATTTTGAATAAAATTGAAATTGTGTGAGACAAAGTACTGGTTCAAGTTGCACTATTTTTTTTGTTTCGTTTTGACAGGAGTGAAAAGGAGCCAAGCTCCCAAATCAGTTACATATTCCTACATAATAAAAATTCTGAATACTAGAAATTATTTTGGATAAAATGTTCCTCCATCCGCACTTGGTGTCTCTTTACCGAATATTAATTGATTTCTTGTCCAAAGGCTTGATGGTCAGGTGTCTCCAATTCCTTCTTTTTGCTTCAGAGATTCCTTCCAACATAGCCTTTAACCCTGCTTGTTCCTTGCTGCTGCAATAAATCCTAGAGGAAACCCCACTTCCATCCATCCCATCCATGTTCCAGTTGATTTTCCCTACTTCCCCACCCCACCCCTGAACTCACCATGAGTGTTAACTATTCTCCTTTCACAACTGTTCTGACCCCCAATAAGATGGTGAACATCCCTGTTGCTTCTTTGTTGTCTTCTCTCAAAACCAGGAGGTTCGTCAATGTCCATATAGCTTTCAAAACCCACGGTTCCACTGGTTCCTCCTCATTGTTCTTGACCTGACTAACTTTCTCCTTTTCTATACTTACCATTTCAAGCTTGTAGTCTCTCTCAATGTTCTCCAAAATGTTCCTGGCATTGCAGCTCTTGTTGTTGAAACTTGAAAGTAATGTCGTTCCTCATGCACCGGATGGACCAAAGTGTTGCTCTGAAGTAGCCAGTTTTATTGTTGTCTTTTTCCTTTTGATTCCTGAACATACGAAGCCAGTTCCATATCCAGTTTGCAATTGGAACATTTGTCTGGTTTTCTGTTCTTAACCCCAGTCTTCCAGCTGCCTACATATGTCTGCTGATAGTACAGTCTCTAAAAAGATGTTTAAGACTTTCAACTTCCACCTTGCAGAACCTGCACGTAGAGTCAGTAATAGTTCTCCTACGTATAAATTCTTTTCCTATAGGCAGTGCGTTGTTGAGGATAATCCCAAGAAAGACTTTCCATTTGTTCATCTTTTCTTTCCATAGGTTCTTCCAGTTTGTTTGGTGAAGCCTTTGCACTAGTACACATTGATTGTTCACATTGATTGTTCTTTGTATATCATAGCCACTCCTCACTGAATAGTGCCCATTCCTATCTTTTCTCCAAACTACTGTGAAGTACTGTGTCCTTGGTTCCCAGGCTCATAGTTCAAGTTGCACTATGATGTCTGCAGAGTCCGTACTTTTTGGTGGAACAGAGGTTATAATTGGACTATTTCTTTTCTCCTGTTGTTCAGATAGTTGAGCATAGACCATTCTTTTGCATTTATTAAAACCCATGTAGGGTATTTTGTGTGTATGAAGCGTCCAGAAGATTGAGTATTAGAGAATATATTGAGTCAAGCGTTGATATTGCATTTCGAATGGGGTCGAAGATATTATTCAGAATTCTGGATCATAAAGGATTAAAATAAAACGATTTAATAAACTTCCTGTACTGCTTCTTTATTGTACATATCACACAACTATTGTGTATCAGACGAATGGCTAATTGGAAACAGCTTTTTTTGTTATCAGAGGATACCGTTTTGTATGTCAGACCCTATTATCCTTTTCAGAGCGGAAGTTTCATCTGTAGCATTGGAGTAGTGACTTTGCTATGTCATTGAGATTAATTTTTTAGTATTTTGCTGGTTGGTGATTTTTCTTTATATAGAGACATCGAAGGTCTTTTTGTTGTGTAGAAGCTGACTCGTCTTCTCAAGTGAAGCTCCTTTTGTGACCCAAGGTTATGCTAGCGGATTCACAGACTCCCTTTTCTCATTGAGTCAAGTGTCAATAATAAAATATTGAACTCTGTCTGTCCTATGCTGATTTACTGCTAAACTATGTTACTCGGACTCGGGTACCCATGTCGGACACGGGTACATGTCCAAATGTCCGACTCGGTTATTTTGTGGAAAAAATTCATGATTTTAGTCCAAAATGAAGTGTCCAGTGTTTGTACCCATGTCCGAGTGTCGAGAATCTGACACGGGTACTTGAGGTAAAATGAAGAGTCCAAGTAACATAGCTACTAAGATCCTCGCCAATATTCTTACCTGTTTTTTATAGCAGACTTTTGGTACTTTCATTTAGTGCTCTGGTTGTTCTTCTCAAACGTACATGAATTTGAGGGTCTAGTAGGAAAAAATCTATTTCAAGCATGCTTTATGGTGTATGTGGCAAGAGTGAATCAAAATTTTAGTCCCCATAAATTTTAGTATTACTTTTTGGTGATTTTGGGCAATTGTTAGCTTAGCATTTGTGTTGTACACCTTTGAGATGTTTTACCTTCAGATTCATGCTTTCATAGGGTATTTGTTAGAGACCCTGTTTCTCCTTTGAGCTGTTCTGTCTCCATGTATATGTACGGGTGCAGTTTCCTTGCAGTGTTCCACTTTCATCCTGGAGGATAAATAGTGGAATTATAAAATAAAAAGTGGGTGATTTATTTAATGAGAAAGTTGGACGAAAGTGATAGAGATTTCAATTTGTTTTGCAACCAATTTTGATGTAGAATAAACTATGTAGTCCCTCTCTGGTGTGAGTGGCAAAGGTCATTTTCCTTTTCACTGGAGTCAATAGGCGCATTCATTCTAAAACCATGTGATATGTATTAGTTTGCCACAAATAATGGAAATGGATGATATATAACTAGATTACCATGAAATTTGATGTTTCCGGGAGCATCTTTTCCCCCCAGTTACTTCCATTTTTATAATTGCGCCCAAATTTAGGCACGCGACATGTTTTGGCTACTAAATTATACTGTTTTTCTATACAAACTTTCATATAATTAGCCTCAAAAAATGTTTGGAGTTGATTCCTTCCAAGGACAAAAACAAAAGAAAGACAATTAAGAGAATAATCCATTGTCCTAGAAAATCTCATCATTGGAGTACTACGGATTGAGTCAAGTAAATTGCATATTAGTTGTCCTATAAGGCTACAATTCTGTCAAAATCTGCACAACTAATTGCATTTTAGATTAATGCTTAGGTACTACTTACTATAAGCTTTTCGAGAGTTATGTCAACATTTGTTGTGCAATCAAAAGTATATACTTGATATATTACCTCCGTTCTGATACGTTCTTTATGGTTACTGTTTTCACGCGAATTAAGGTAAAGGAGACTTACGTCATTTTTCTGTGAACTGATTTGCTCTCAGACTTTTATTTCAAAAGATAAGTCACTTTGGAAGATTTTTATGCACCTCTCACAAGTTACTATTGCATCTTTTACCAGTTACCATTTTTGATGATAGCTTCTTGTCTTTTCAGGCCAGAAGCATTCAGGTCAAAAAACATTGACAGTTCCAGTAGAAATTCCCCAGGACCTGCTTCTGAACATGAGGAAGCTGAAGAAACAGGCTCAAGCGATGATGATGGACTTCCACCGCTTGAAACAAACACGAACAGGAGAAGACCGTATGAATTGAACGCTGGTTCGGCGTCAAATTCTGATGCAGATACAGACACTGACGAAGAATCTTAGACAAACAATTTTCTGGTGAACAGATATTAATCTTTATATTTTACTGAAATTGTACACAGAATTCTGTTAAACTCAATTCCCTGATAGTGTTACTGTTGAGATGAATTTATTCAGTTATTCAGGTAGTTCATGTTAAACTGAAAGTGTAAAGTAGATTCATGAAAGTTCCAAAATGAAGTTCCAGTTAAGTGCTATTTCTCGATTTGTACACTTCAATAACTTCACAAATTCTTACTCTGTATGTACTGTACTTCATAGCAGGGGCAAAATGAATATTTCAGGATAGACTTAAGAAGGTTGAATCTCAATAACTTTCACCTATGCATCCCATTTTGGACTGACTTAATTAATGTAAAAAAGTTATTTCCTCC

mRNA sequence

ATGTTTTCAATATCCATTGATTATGTTTCCATTGCTCCCGCCAGTAGGTTTGGTGGAACGGTGGTGTTCGGAGAGATTGTGAGGGATAATATGGGCGGAGGGAGAAAGAATTTGAAGAGGGAAGTGGAAGATGACGGCTTAACTCTCCAATTAGGTCAAAGTATTATGCAAGTCGTGTCGCTTCGAGGTTCTAATCTTATTGAGGTTACAGATGCTGAAGGTGAGAAGTCCTTGGCTCTTTTTCCGGCTAAATTTCAGAAGAGTATGTGGATAAAAAGAGGGAGTTTTGTCGTAGTAGATGACAGCGCTAAGGTGGAGGCTCTTGAGTCTGGTAGTAAGGTGGGATGTATCGTATCCCAGGTTCTCTTTCATGATAAAGTTAGACGTCTGCAAAAAAGTTCTGACTGGCCAGAAGCATTCAGGTCAAAAAACATTGACAGTTCCAGTAGAAATTCCCCAGGACCTGCTTCTGAACATGAGGAAGCTGAAGAAACAGGCTCAAGCGATGATGATGGACTTCCACCGCTTGAAACAAACACGAACAGGAGAAGACCGTATGAATTGAACGCTGGTTCGGCGTCAAATTCTGATGCAGATACAGACACTGACGAAGAATCTTAGACAAACAATTTTCTGGTGAACAGATATTAATCTTTATATTTTACTGAAATTGTACACAGAATTCTGTTAAACTCAATTCCCTGATAGTGTTACTGTTGAGATGAATTTATTCAGTTATTCAGGTAGTTCATGTTAAACTGAAAGTGTAAAGTAGATTCATGAAAGTTCCAAAATGAAGTTCCAGTTAAGTGCTATTTCTCGATTTGTACACTTCAATAACTTCACAAATTCTTACTCTGTATGTACTGTACTTCATAGCAGGGGCAAAATGAATATTTCAGGATAGACTTAAGAAGGTTGAATCTCAATAACTTTCACCTATGCATCCCATTTTGGACTGACTTAATTAATGTAAAAAAGTTATTTCCTCC

Coding sequence (CDS)

ATGTTTTCAATATCCATTGATTATGTTTCCATTGCTCCCGCCAGTAGGTTTGGTGGAACGGTGGTGTTCGGAGAGATTGTGAGGGATAATATGGGCGGAGGGAGAAAGAATTTGAAGAGGGAAGTGGAAGATGACGGCTTAACTCTCCAATTAGGTCAAAGTATTATGCAAGTCGTGTCGCTTCGAGGTTCTAATCTTATTGAGGTTACAGATGCTGAAGGTGAGAAGTCCTTGGCTCTTTTTCCGGCTAAATTTCAGAAGAGTATGTGGATAAAAAGAGGGAGTTTTGTCGTAGTAGATGACAGCGCTAAGGTGGAGGCTCTTGAGTCTGGTAGTAAGGTGGGATGTATCGTATCCCAGGTTCTCTTTCATGATAAAGTTAGACGTCTGCAAAAAAGTTCTGACTGGCCAGAAGCATTCAGGTCAAAAAACATTGACAGTTCCAGTAGAAATTCCCCAGGACCTGCTTCTGAACATGAGGAAGCTGAAGAAACAGGCTCAAGCGATGATGATGGACTTCCACCGCTTGAAACAAACACGAACAGGAGAAGACCGTATGAATTGAACGCTGGTTCGGCGTCAAATTCTGATGCAGATACAGACACTGACGAAGAATCTTAG

Protein sequence

MFSISIDYVSIAPASRFGGTVVFGEIVRDNMGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMWIKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSRNSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEES

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo07913.1	Spo07913.1	mRNA

Homology

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BLAST of Spo07913.1 vs. NCBI nr
Match: gi|902205769|gb|KNA15260.1| (hypothetical protein SOVF_099740 [Spinacia oleracea])

HSP 1 Score: 337.0 bits (863), Expect = 2.300e-89
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1


		  
Query: 31  MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 90
           MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW
Sbjct: 1   MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 60

Query: 91  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR 150
           IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR
Sbjct: 61  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR 120

Query: 151 NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEES 207
           NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEES
Sbjct: 121 NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEES 176

[Close]

BLAST of Spo07913.1 vs. NCBI nr
Match: gi|731335723|ref|XP_010678866.1| (PREDICTED: probable RNA-binding protein EIF1AD [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 271.9 bits (694), Expect = 8.900e-70
Identity = 144/176 (81.82%), Postives = 160/176 (90.91%), Query Frame = 1


		  
Query: 31  MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 90
           MGGGRKNLKR VE+D LTLQ GQSIMQVVSLRGSNLIE+ DAEG+KSLALFPAKFQKSMW
Sbjct: 1   MGGGRKNLKRAVEEDTLTLQQGQSIMQVVSLRGSNLIEIVDAEGKKSLALFPAKFQKSMW 60

Query: 91  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR 150
           IKRGSFVVVD S + +ALESGSKV CIVSQVLFHDKVRRLQKS +WPEAF+S+ ID+SS+
Sbjct: 61  IKRGSFVVVDGSNREDALESGSKVACIVSQVLFHDKVRRLQKSPEWPEAFKSQIIDTSSK 120

Query: 151 NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEES 207
           N+PGPASE  + EET +SDDDGLPPLETN NR RPYEL++GSASNSDADT+TDEES
Sbjct: 121 NTPGPASE-GDVEETDTSDDDGLPPLETNMNRWRPYELHSGSASNSDADTETDEES 175

[Close]

BLAST of Spo07913.1 vs. NCBI nr
Match: gi|870859236|gb|KMT10700.1| (hypothetical protein BVRB_5g118090 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 262.7 bits (670), Expect = 5.400e-67
Identity = 144/189 (76.19%), Postives = 160/189 (84.66%), Query Frame = 1


		  
Query: 31  MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 90
           MGGGRKNLKR VE+D LTLQ GQSIMQVVSLRGSNLIE+ DAEG+KSLALFPAKFQKSMW
Sbjct: 1   MGGGRKNLKRAVEEDTLTLQQGQSIMQVVSLRGSNLIEIVDAEGKKSLALFPAKFQKSMW 60

Query: 91  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSD-------------WP 150
           IKRGSFVVVD S + +ALESGSKV CIVSQVLFHDKVRRLQKS +             WP
Sbjct: 61  IKRGSFVVVDGSNREDALESGSKVACIVSQVLFHDKVRRLQKSPEWFPMTLCNLLLHIWP 120

Query: 151 EAFRSKNIDSSSRNSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSD 207
           EAF+S+ ID+SS+N+PGPASE  + EET +SDDDGLPPLETN NR RPYEL++GSASNSD
Sbjct: 121 EAFKSQIIDTSSKNTPGPASE-GDVEETDTSDDDGLPPLETNMNRWRPYELHSGSASNSD 180

[Close]

BLAST of Spo07913.1 vs. NCBI nr
Match: gi|567886856|ref|XP_006435950.1| (hypothetical protein CICLE_v10032334mg [Citrus clementina])

HSP 1 Score: 221.1 bits (562), Expect = 1.800e-54
Identity = 117/185 (63.24%), Postives = 144/185 (77.84%), Query Frame = 1


		  
Query: 18  GGTVVFGEIVRDNMGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKS 77
           G  ++  EI    M GGRKNLKR  E+  LTLQ GQSIMQVVSLRGSNLIEV DA+GEKS
Sbjct: 98  GDCLIVLEIREKPMKGGRKNLKRAAEEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKGEKS 157

Query: 78  LALFPAKFQKSMWIKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWP 137
           LALFPAKFQKSMWIKRGSFVVVD+S K +A++ GSKV CIV++VLF+++VR LQKS++WP
Sbjct: 158 LALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWP 217

Query: 138 EAFRSKNIDSSSRNSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSD 197
           E F+S N D ++ +    A  HEE +++ S DDDGLPPLE NTNR +P EL   S S+S+
Sbjct: 218 EIFKSTNSDDANGSLERQACNHEENDQSESDDDDGLPPLEANTNRMKPMELQTQSESDSE 277

Query: 198 ADTDT 203
           +DTD+
Sbjct: 278 SDTDS 282

[Close]

BLAST of Spo07913.1 vs. NCBI nr
Match: gi|568865564|ref|XP_006486144.1| (PREDICTED: probable RNA-binding protein EIF1AD [Citrus sinensis])

HSP 1 Score: 218.8 bits (556), Expect = 9.000e-54
Identity = 114/172 (66.28%), Postives = 139/172 (80.81%), Query Frame = 1


		  
Query: 31  MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 90
           M GGRKNLKR  E+  LTLQ GQSIMQVVSLRGSNLIEV DA+GEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLKRAAEEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKGEKSLALFPAKFQKSMW 60

Query: 91  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR 150
           IKRGSFVVVD+S K +A++ GSKV CIV++VLF+++VR LQKS++WPE F+S N D ++ 
Sbjct: 61  IKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIFKSTNSDDANG 120

Query: 151 NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDT 203
           +    A  HEE +++ S DDDGLPPLE NTNR +P EL   S S+S++DTD+
Sbjct: 121 SLERQACNHEENDQSESDDDDGLPPLEANTNRMKPMELQTQSESDSESDTDS 172

[Close]

BLAST of Spo07913.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6X2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099740 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.600e-89
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1


		  
Query: 31  MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 90
           MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW
Sbjct: 1   MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 60

Query: 91  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR 150
           IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR
Sbjct: 61  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR 120

Query: 151 NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEES 207
           NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEES
Sbjct: 121 NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEES 176

[Close]

BLAST of Spo07913.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CEW5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g118090 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 6.200e-70
Identity = 144/176 (81.82%), Postives = 160/176 (90.91%), Query Frame = 1


		  
Query: 31  MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 90
           MGGGRKNLKR VE+D LTLQ GQSIMQVVSLRGSNLIE+ DAEG+KSLALFPAKFQKSMW
Sbjct: 1   MGGGRKNLKRAVEEDTLTLQQGQSIMQVVSLRGSNLIEIVDAEGKKSLALFPAKFQKSMW 60

Query: 91  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR 150
           IKRGSFVVVD S + +ALESGSKV CIVSQVLFHDKVRRLQKS +WPEAF+S+ ID+SS+
Sbjct: 61  IKRGSFVVVDGSNREDALESGSKVACIVSQVLFHDKVRRLQKSPEWPEAFKSQIIDTSSK 120

Query: 151 NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEES 207
           N+PGPASE  + EET +SDDDGLPPLETN NR RPYEL++GSASNSDADT+TDEES
Sbjct: 121 NTPGPASE-GDVEETDTSDDDGLPPLETNMNRWRPYELHSGSASNSDADTETDEES 175

[Close]

BLAST of Spo07913.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CAC8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g118090 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.800e-67
Identity = 144/189 (76.19%), Postives = 160/189 (84.66%), Query Frame = 1


		  
Query: 31  MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 90
           MGGGRKNLKR VE+D LTLQ GQSIMQVVSLRGSNLIE+ DAEG+KSLALFPAKFQKSMW
Sbjct: 1   MGGGRKNLKRAVEEDTLTLQQGQSIMQVVSLRGSNLIEIVDAEGKKSLALFPAKFQKSMW 60

Query: 91  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSD-------------WP 150
           IKRGSFVVVD S + +ALESGSKV CIVSQVLFHDKVRRLQKS +             WP
Sbjct: 61  IKRGSFVVVDGSNREDALESGSKVACIVSQVLFHDKVRRLQKSPEWFPMTLCNLLLHIWP 120

Query: 151 EAFRSKNIDSSSRNSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSD 207
           EAF+S+ ID+SS+N+PGPASE  + EET +SDDDGLPPLETN NR RPYEL++GSASNSD
Sbjct: 121 EAFKSQIIDTSSKNTPGPASE-GDVEETDTSDDDGLPPLETNMNRWRPYELHSGSASNSD 180

[Close]

BLAST of Spo07913.1 vs. UniProtKB/TrEMBL
Match: V4TCA9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032334mg PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.300e-54
Identity = 117/185 (63.24%), Postives = 144/185 (77.84%), Query Frame = 1


		  
Query: 18  GGTVVFGEIVRDNMGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKS 77
           G  ++  EI    M GGRKNLKR  E+  LTLQ GQSIMQVVSLRGSNLIEV DA+GEKS
Sbjct: 98  GDCLIVLEIREKPMKGGRKNLKRAAEEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKGEKS 157

Query: 78  LALFPAKFQKSMWIKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWP 137
           LALFPAKFQKSMWIKRGSFVVVD+S K +A++ GSKV CIV++VLF+++VR LQKS++WP
Sbjct: 158 LALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWP 217

Query: 138 EAFRSKNIDSSSRNSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSD 197
           E F+S N D ++ +    A  HEE +++ S DDDGLPPLE NTNR +P EL   S S+S+
Sbjct: 218 EIFKSTNSDDANGSLERQACNHEENDQSESDDDDGLPPLEANTNRMKPMELQTQSESDSE 277

Query: 198 ADTDT 203
           +DTD+
Sbjct: 278 SDTDS 282

[Close]

BLAST of Spo07913.1 vs. UniProtKB/TrEMBL
Match: A0A151SG33_CAJCA (Putative RNA-binding protein EIF1AD OS=Cajanus cajan GN=KK1_024340 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.100e-53
Identity = 116/172 (67.44%), Postives = 134/172 (77.91%), Query Frame = 1


		  
Query: 31  MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 90
           M GGRKNLKR  E+  +TLQ GQSIMQV+SLRGSNLIEV DA G KSLALFPAKFQ+SMW
Sbjct: 1   MRGGRKNLKRATEEKHITLQDGQSIMQVLSLRGSNLIEVMDASGNKSLALFPAKFQRSMW 60

Query: 91  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR 150
           IKRGSFVVVD+S K +ALESGSKV CIVSQVLF+++VR LQKS +WPE F+S+ +D S+ 
Sbjct: 61  IKRGSFVVVDESGKEKALESGSKVACIVSQVLFYEQVRELQKSPEWPEKFKSETLDDSNS 120

Query: 151 NS-PGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTD 202
           N       E+E  +E   SDDDGLPPLE NTNR RP+EL A   S S +DTD
Sbjct: 121 NERTASQQENEREDEMEGSDDDGLPPLEANTNRMRPFELEADEDSESSSDTD 172

[Close]

BLAST of Spo07913.1 vs. ExPASy Swiss-Prot
Match: EIF1A_BOVIN (Probable RNA-binding protein EIF1AD OS=Bos taurus GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.000e-17
Identity = 60/157 (38.22%), Postives = 89/157 (56.69%), Query Frame = 1


		  
Query: 35  RKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMWIKRG 94
           RK++ +EV  + +     Q I++V+   G+NL EV  A+G++ L   P+K++K++WIKRG
Sbjct: 7   RKHVVKEVLGEHMVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRG 66

Query: 95  SFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAF----RSKNIDSSSR 154
            F++VD       +E G KV   +S VL  D VR LQK   WPEAF       N D + +
Sbjct: 67  DFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKDGHWPEAFSQVTEKDNNDRNRQ 126

Query: 155 NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYE 188
             P   +E + + E  SS+DD    L  NTNRR+ +E
Sbjct: 127 TQPELPAEPQSSGEESSSEDDS--DLFVNTNRRQYHE 155

[Close]

BLAST of Spo07913.1 vs. ExPASy Swiss-Prot
Match: EIF1A_DANRE (Probable RNA-binding protein EIF1AD OS=Danio rerio GN=eif1ad PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 8.800e-17
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 1


		  
Query: 35  RKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMWIKRG 94
           RK++ +EV +D +T    Q IM+V+   G+NL E     GE+ L   P KF+K++WIKRG
Sbjct: 7   RKHVVKEVLEDYVTPTEDQQIMRVLGSNGNNLHEAVTGSGERFLLSMPTKFRKNIWIKRG 66

Query: 95  SFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSRN--S 154
            FV+VD       ++ G KV   +S +L+ D ++ L+K   WPE F+ ++  S  RN  +
Sbjct: 67  DFVIVD------PIKEGGKVKGEISFILYRDHIQHLRKLGVWPEGFQ-EDRTSGERNEGT 126

Query: 155 PGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYELNAGSASNSDADTDTDEE 206
               SE +E EE  S  +D    L  NTNR           S S+ +TD DEE
Sbjct: 127 QKERSEEKEEEEGDSESEDDDSDLFVNTNRATVL------YSESEEETDEDEE 166

[Close]

BLAST of Spo07913.1 vs. ExPASy Swiss-Prot
Match: EIF1A_HUMAN (Probable RNA-binding protein EIF1AD OS=Homo sapiens GN=EIF1AD PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.100e-16
Identity = 59/156 (37.82%), Postives = 90/156 (57.69%), Query Frame = 1


		  
Query: 35  RKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMWIKRG 94
           RK++ +EV  + +     Q I++V+   G+NL EV  A+G++ L   P+K++K++WIKRG
Sbjct: 7   RKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRG 66

Query: 95  SFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAF---RSKNIDSSSRN 154
            F++VD       +E G KV   +S VL  D VR LQK   WPEAF     K+ + + + 
Sbjct: 67  DFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNRNRQT 126

Query: 155 SPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYE 188
            P   +E + + E  SS+DD    L  NTNRR+ +E
Sbjct: 127 QPELPAEPQLSGEESSSEDDS--DLFVNTNRRQYHE 154

[Close]

BLAST of Spo07913.1 vs. ExPASy Swiss-Prot
Match: EIF1A_MACFA (Probable RNA-binding protein EIF1AD OS=Macaca fascicularis GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.100e-16
Identity = 59/156 (37.82%), Postives = 90/156 (57.69%), Query Frame = 1


		  
Query: 35  RKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMWIKRG 94
           RK++ +EV  + +     Q I++V+   G+NL EV  A+G++ L   P+K++K++WIKRG
Sbjct: 7   RKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRG 66

Query: 95  SFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAF---RSKNIDSSSRN 154
            F++VD       +E G KV   +S VL  D VR LQK   WPEAF     K+ + + + 
Sbjct: 67  DFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNRNRQT 126

Query: 155 SPGPASEHEEAEETGSSDDDGLPPLETNTNRRRPYE 188
            P   +E + + E  SS+DD    L  NTNRR+ +E
Sbjct: 127 QPELPAEPQLSGEESSSEDDS--DLFVNTNRRQYHE 154

[Close]

BLAST of Spo07913.1 vs. ExPASy Swiss-Prot
Match: EIF1A_PONAB (Probable RNA-binding protein EIF1AD OS=Pongo abelii GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.300e-16
Identity = 58/154 (37.66%), Postives = 87/154 (56.49%), Query Frame = 1


		  
Query: 35  RKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMWIKRG 94
           RK++ +EV  + +     Q I++V+   G+NL EV  A+G++ L   P+K++K++WIKRG
Sbjct: 7   RKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRG 66

Query: 95  SFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAF----RSKNIDSSSR 154
            F++VD       +E G KV   +S VL  D VR LQK   WPEAF       N + + +
Sbjct: 67  DFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNNRNRQ 126

Query: 155 NSPGPASEHEEAEETGSSDDDGLPPLETNTNRRR 185
             P   +E + + E  SS+DD    L  NTNRR+
Sbjct: 127 TQPELPAEPQLSGEESSSEDDS--DLFVNTNRRQ 152

[Close]

BLAST of Spo07913.1 vs. TAIR (Arabidopsis)
Match: AT2G40780.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 168.7 bits (426), Expect = 3.800e-42
Identity = 93/173 (53.76%), Postives = 124/173 (71.68%), Query Frame = 1


		  
Query: 31  MGGGRKNLKREVEDDGLTLQLGQSIMQVVSLRGSNLIEVTDAEGEKSLALFPAKFQKSMW 90
           M  GR+NLK+   D   TL+  QSI QVVSLRGSN IE+ DA+GE SLALFPAKF++SMW
Sbjct: 1   MNRGRRNLKQAASDQDFTLEECQSIAQVVSLRGSNQIEIMDAKGENSLALFPAKFRESMW 60

Query: 91  IKRGSFVVVDDSAKVEALESGSKVGCIVSQVLFHDKVRRLQKSSDWPEAFRSKNIDSSSR 150
           I+RGSFVV+D + K +A ESGSKV  IV +VLF ++VR LQKS +WPE F+      + +
Sbjct: 61  IRRGSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRLLQKSPEWPEIFKDTRPIPAEK 120

Query: 151 NSPGPASEHEEAEETGSS-DDDGLPPLETNTNRRRPYELNAGSASNSDADTDT 203
           +S  P  +HE+  E  SS DDDG+PPL+ NTNR RP+ +   + ++S +D+D+
Sbjct: 121 SS--PIEQHEDDGEVDSSDDDDGMPPLQANTNRLRPFGVKCDAETDSGSDSDS 171

The following BLAST results are available for this feature:

BLAST of Spo07913.1 vs. NCBI nr
BLAST of Spo07913.1 vs. UniProtKB/TrEMBL
BLAST of Spo07913.1 vs. ExPASy Swiss-Prot
BLAST of Spo07913.1 vs. TAIR (Arabidopsis)

BLAST of Spo07913.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902205769\|gb\|KNA15260.1\|	2.3e-89	100.	hypothetical protein SOVF_0997...	[more]
gi\|731335723\|ref\|XP_010678866.1\|	8.9e-70	81.8	PREDICTED: probable RNA-bindin...	[more]
gi\|870859236\|gb\|KMT10700.1\|	5.4e-67	76.1	hypothetical protein BVRB_5g11...	[more]
gi\|567886856\|ref\|XP_006435950.1\|	1.8e-54	63.2	hypothetical protein CICLE_v10...	[more]
gi\|568865564\|ref\|XP_006486144.1\|	9.0e-54	66.2	PREDICTED: probable RNA-bindin...	[more]

BLAST of Spo07913.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R6X2_SPIOL	1.6e-89	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CEW5_BETVU	6.2e-70	81.8	Uncharacterized protein OS=Bet...	[more]
A0A0J8CAC8_BETVU	3.8e-67	76.1	Uncharacterized protein OS=Bet...	[more]
V4TCA9_9ROSI	1.3e-54	63.2	Uncharacterized protein OS=Cit...	[more]
A0A151SG33_CAJCA	3.1e-53	67.4	Putative RNA-binding protein E...	[more]

BLAST of Spo07913.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
EIF1A_BOVIN	1.0e-17	38.2	Probable RNA-binding protein E...	[more]
EIF1A_DANRE	8.8e-17	36.9	Probable RNA-binding protein E...	[more]
EIF1A_HUMAN	1.1e-16	37.8	Probable RNA-binding protein E...	[more]
EIF1A_MACFA	1.1e-16	37.8	Probable RNA-binding protein E...	[more]
EIF1A_PONAB	3.3e-16	37.6	Probable RNA-binding protein E...	[more]

BLAST of Spo07913.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G40780.1	3.8e-42	53.7	Nucleic acid-binding, OB-fold-...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001253	Translation initiation factor 1A (eIF-1A)	SMART	SM00652	eIF1neu4	coord: 48..137 score: 2.8
IPR006196	RNA-binding domain, S1, IF1 type	PFAM	PF01176	eIF-1a	coord: 52..102 score: 4.6
IPR006196	RNA-binding domain, S1, IF1 type	PROFILE	PS50832	S1_IF1_TYPE	coord: 38..100 score: 8
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140		coord: 30..170 score: 7.4
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 30..171 score: 6.85
None	No IPR available	PANTHER	PTHR21641	TRANSLATION INITIATION FACTOR-RELATED	coord: 31..204 score: 5.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006413	translational initiation
biological_process	GO:0032482	Rab protein signal transduction
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0016556	mRNA modification
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005773	vacuole
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0019003	GDP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11509	0.74	Barchart \| Table
Spo11688	0.71	Barchart \| Table
Spo23382	0.70	Barchart \| Table
Spo09387	0.69	Barchart \| Table
Spo26975	0.69	Barchart \| Table
Spo13783	0.69	Barchart \| Table
Spo14403	0.68	Barchart \| Table
Spo23286	0.68	Barchart \| Table
Spo22167	0.67	Barchart \| Table
Spo04104	0.67	Barchart \| Table
Spo18111	0.67	Barchart \| Table
Spo14779	0.67	Barchart \| Table
Spo00283	0.67	Barchart \| Table
Spo00214	0.66	Barchart \| Table
Spo13950	0.66	Barchart \| Table
Spo15873	0.66	Barchart \| Table
Spo19850	0.66	Barchart \| Table
Spo21635	0.66	Barchart \| Table
Spo23249	0.65	Barchart \| Table
Spo21833	0.65	Barchart \| Table
Spo27239	0.65	Barchart \| Table