Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACAGTCCTCCCAAGCTTTTCTCTCTCTCCTCAAATCCCTCCAATCACCCCTTACCCACTTCAATTCTCCCACCACTCTCTCTCCTCCATTCCCAAAAATCTAAACTTTCTCTCTCCTAAACCCCTCTTTTCCCGCCCAATTACAATCACAAAACCCTTATCCTCAAAATCCGACAAAACCCACCATTCATCTCCTCCTTCAAACACTCAAGAAGATGGAATTCCCATTGATCATGTCAAAACTCTCGTCAAATTCAAGTCTCGTTATAATTACATCAGGGTTCTAGAAGTTTCCAGAAGGGCCGACCACCCTTTTAGGGGCTCAAGACTCCTCCTTCTAGATGGTCCTGGAAACATCCATAGCATCAGTTTCCTGTTTAGAACACTAACAGATACTTACTTTGATGTTTTTGGGACATTACCCCCAATCATACCACCTGGCCCAATTGGGGTTCTTGGTTTTGGGGCAGGTTCAGCTGCAAAAATCTTATTGGAGTTGTACCCGCAAGTTGTAGTTCATGGTTGGGAGATTGATCCTGCTGTAATTGATGTTGGGAGGGAGTATTTCGGGCTTTCAAAGCTCGAAAAACAATACCCAGAAAGGCTTTTTATCTACAATGGTGATGCATTGAAGGCTAGTGTAAGAGATAGGTTTTCTGGGATATTGGTTGATTTGTTTAGTGAAGGGAGTTTGATACCTGAGCTTCAGGACCCTTTGACATGGAAAAGGTTGAAGAATAGCTTGAGGAAAGGTGGAAGGATTATGGTTAATGTGGGAGGAAGTTGTGTTGAGGCCGAGGATTCGAGGAGAGACGGGAAATTGATTATGAAGGAGTCTTTGAAGGCAATGTATGAGGTTTTCCCTAATCAATTGTATGTGTTGAACCTTGGGAATAAGAAAGATGATAGTTCACTTGCACTTACAGGTGGTTTTCCAGATTTGATTGCTTGGAAGAAGGTGATGCCTAAGTCTTTGAGGGGTTATGTTGATATGTGGACTCCTGTTGGTGGATAGTTTTTTGTATGATATGATTCAATCTTTTTGATTTAGGAAGGAATCACTTGGAACAGTTCAGTATTAGTGTCAATTTTTCGCGGTCATGGATATGTTAATACAACCCTTGGCAAATGA ATGAAAACAGTCCTCCCAAGCTTTTCTCTCTCTCCTCAAATCCCTCCAATCACCCCTTACCCACTTCAATTCTCCCACCACTCTCTCTCCTCCATTCCCAAAAATCTAAACTTTCTCTCTCCTAAACCCCTCTTTTCCCGCCCAATTACAATCACAAAACCCTTATCCTCAAAATCCGACAAAACCCACCATTCATCTCCTCCTTCAAACACTCAAGAAGATGGAATTCCCATTGATCATGTCAAAACTCTCGTCAAATTCAAGTCTCGTTATAATTACATCAGGGTTCTAGAAGTTTCCAGAAGGGCCGACCACCCTTTTAGGGGCTCAAGACTCCTCCTTCTAGATGGTCCTGGAAACATCCATAGCATCAGTTTCCTGTTTAGAACACTAACAGATACTTACTTTGATGTTTTTGGGACATTACCCCCAATCATACCACCTGGCCCAATTGGGGTTCTTGGTTTTGGGGCAGGTTCAGCTGCAAAAATCTTATTGGAGTTGTACCCGCAAGTTGTAGTTCATGGTTGGGAGATTGATCCTGCTGTAATTGATGTTGGGAGGGAGTATTTCGGGCTTTCAAAGCTCGAAAAACAATACCCAGAAAGGCTTTTTATCTACAATGGTGATGCATTGAAGGCTAGTGTAAGAGATAGGTTTTCTGGGATATTGGTTGATTTGTTTAGTGAAGGGAGTTTGATACCTGAGCTTCAGGACCCTTTGACATGGAAAAGGTTGAAGAATAGCTTGAGGAAAGGTGGAAGGATTATGGTTAATGTGGGAGGAAGTTGTGTTGAGGCCGAGGATTCGAGGAGAGACGGGAAATTGATTATGAAGGAGTCTTTGAAGGCAATGTATGAGGTTTTCCCTAATCAATTGTATGTGTTGAACCTTGGGAATAAGAAAGATGATAGTTCACTTGCACTTACAGGTGGTTTTCCAGATTTGATTGCTTGGAAGAAGGAAGGAATCACTTGGAACAGTTCAGTATTAGTGTCAATTTTTCGCGGTCATGGATATGTTAATACAACCCTTGGCAAATGA ATGAAAACAGTCCTCCCAAGCTTTTCTCTCTCTCCTCAAATCCCTCCAATCACCCCTTACCCACTTCAATTCTCCCACCACTCTCTCTCCTCCATTCCCAAAAATCTAAACTTTCTCTCTCCTAAACCCCTCTTTTCCCGCCCAATTACAATCACAAAACCCTTATCCTCAAAATCCGACAAAACCCACCATTCATCTCCTCCTTCAAACACTCAAGAAGATGGAATTCCCATTGATCATGTCAAAACTCTCGTCAAATTCAAGTCTCGTTATAATTACATCAGGGTTCTAGAAGTTTCCAGAAGGGCCGACCACCCTTTTAGGGGCTCAAGACTCCTCCTTCTAGATGGTCCTGGAAACATCCATAGCATCAGTTTCCTGTTTAGAACACTAACAGATACTTACTTTGATGTTTTTGGGACATTACCCCCAATCATACCACCTGGCCCAATTGGGGTTCTTGGTTTTGGGGCAGGTTCAGCTGCAAAAATCTTATTGGAGTTGTACCCGCAAGTTGTAGTTCATGGTTGGGAGATTGATCCTGCTGTAATTGATGTTGGGAGGGAGTATTTCGGGCTTTCAAAGCTCGAAAAACAATACCCAGAAAGGCTTTTTATCTACAATGGTGATGCATTGAAGGCTAGTGTAAGAGATAGGTTTTCTGGGATATTGGTTGATTTGTTTAGTGAAGGGAGTTTGATACCTGAGCTTCAGGACCCTTTGACATGGAAAAGGTTGAAGAATAGCTTGAGGAAAGGTGGAAGGATTATGGTTAATGTGGGAGGAAGTTGTGTTGAGGCCGAGGATTCGAGGAGAGACGGGAAATTGATTATGAAGGAGTCTTTGAAGGCAATGTATGAGGTTTTCCCTAATCAATTGTATGTGTTGAACCTTGGGAATAAGAAAGATGATAGTTCACTTGCACTTACAGGTGGTTTTCCAGATTTGATTGCTTGGAAGAAGGAAGGAATCACTTGGAACAGTTCAGTATTAGTGTCAATTTTTCGCGGTCATGGATATGTTAATACAACCCTTGGCAAATGA MKTVLPSFSLSPQIPPITPYPLQFSHHSLSSIPKNLNFLSPKPLFSRPITITKPLSSKSDKTHHSSPPSNTQEDGIPIDHVKTLVKFKSRYNYIRVLEVSRRADHPFRGSRLLLLDGPGNIHSISFLFRTLTDTYFDVFGTLPPIIPPGPIGVLGFGAGSAAKILLELYPQVVVHGWEIDPAVIDVGREYFGLSKLEKQYPERLFIYNGDALKASVRDRFSGILVDLFSEGSLIPELQDPLTWKRLKNSLRKGGRIMVNVGGSCVEAEDSRRDGKLIMKESLKAMYEVFPNQLYVLNLGNKKDDSSLALTGGFPDLIAWKKEGITWNSSVLVSIFRGHGYVNTTLGK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07915.1 vs. NCBI nr
Match: gi|902217549|gb|KNA17766.1| (hypothetical protein SOVF_077060 [Spinacia oleracea]) HSP 1 Score: 650.6 bits (1677), Expect = 1.600e-183 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1
BLAST of Spo07915.1 vs. NCBI nr
Match: gi|731335683|ref|XP_010678847.1| (PREDICTED: uncharacterized protein LOC104894336 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 545.0 bits (1403), Expect = 9.200e-152 Identity = 266/321 (82.87%), Postives = 292/321 (90.97%), Query Frame = 1
BLAST of Spo07915.1 vs. NCBI nr
Match: gi|566206767|ref|XP_002322190.2| (hypothetical protein POPTR_0015s09390g [Populus trichocarpa]) HSP 1 Score: 448.7 bits (1153), Expect = 9.000e-123 Identity = 222/310 (71.61%), Postives = 263/310 (84.84%), Query Frame = 1
BLAST of Spo07915.1 vs. NCBI nr
Match: gi|743905617|ref|XP_011046213.1| (PREDICTED: uncharacterized protein LOC105140875 [Populus euphratica]) HSP 1 Score: 441.8 bits (1135), Expect = 1.100e-120 Identity = 219/310 (70.65%), Postives = 260/310 (83.87%), Query Frame = 1
BLAST of Spo07915.1 vs. NCBI nr
Match: gi|590663856|ref|XP_007036339.1| (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 437.2 bits (1123), Expect = 2.700e-119 Identity = 210/313 (67.09%), Postives = 258/313 (82.43%), Query Frame = 1
BLAST of Spo07915.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE37_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_077060 PE=4 SV=1) HSP 1 Score: 650.6 bits (1677), Expect = 1.100e-183 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1
BLAST of Spo07915.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFA2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g117910 PE=4 SV=1) HSP 1 Score: 545.0 bits (1403), Expect = 6.400e-152 Identity = 266/321 (82.87%), Postives = 292/321 (90.97%), Query Frame = 1
BLAST of Spo07915.1 vs. UniProtKB/TrEMBL
Match: B9IEX2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s09390g PE=4 SV=2) HSP 1 Score: 448.7 bits (1153), Expect = 6.300e-123 Identity = 222/310 (71.61%), Postives = 263/310 (84.84%), Query Frame = 1
BLAST of Spo07915.1 vs. UniProtKB/TrEMBL
Match: A0A061FUC9_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_012182 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 1.900e-119 Identity = 210/313 (67.09%), Postives = 258/313 (82.43%), Query Frame = 1
BLAST of Spo07915.1 vs. UniProtKB/TrEMBL
Match: F6GSI4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09060 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 3.200e-119 Identity = 215/311 (69.13%), Postives = 257/311 (82.64%), Query Frame = 1
BLAST of Spo07915.1 vs. ExPASy Swiss-Prot
Match: SPEE_BIFLO (Probable polyamine aminopropyl transferase OS=Bifidobacterium longum (strain NCC 2705) GN=speE PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.600e-9 Identity = 43/174 (24.71%), Postives = 84/174 (48.28%), Query Frame = 1
BLAST of Spo07915.1 vs. TAIR (Arabidopsis)
Match: AT5G63100.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 367.5 bits (942), Expect = 9.300e-102 Identity = 191/304 (62.83%), Postives = 233/304 (76.64%), Query Frame = 1
BLAST of Spo07915.1 vs. TAIR (Arabidopsis)
Match: AT5G44600.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 168.3 bits (425), Expect = 8.300e-42 Identity = 110/316 (34.81%), Postives = 169/316 (53.48%), Query Frame = 1
BLAST of Spo07915.1 vs. TAIR (Arabidopsis)
Match: AT5G44590.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 147.1 bits (370), Expect = 2.000e-35 Identity = 91/263 (34.60%), Postives = 138/263 (52.47%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07915.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07915.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07915.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo07915.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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