Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAACGGATGCCACGCCAGAAATTGTCTCACCTCACACACACACATTACGTTCTTCTTCAACTCTCGGCTCTCCGTTTCTCCGTCCTTCCTTTCATCAGGTTGTTCCCCCCACCACTAAAATCGTCGTTTAAACCCTAATTTCTGCATTTCTCTTCTTTCGATTAATCATACCACGATCTTCATCATTCAATTTCAATTTTGATCTCTTTTGATTCGATTGCGTCTGCAAAAATTGACACTTTTTTTTAATCTCATTTCCTGGAATTTACTCAATCTGGATATGCCATCCACTAGATTTTCCCGATTTTTTCCCTAGAAAGTTCAATCTTTTTATTTTTTATTTGAATGGCAGAAATACCAGTATTTTCATCGTTGACTACCGAGATTGTTGCATTGATGTCCTAGTATTGCTTTCAATTTACTGGATTTTTAATTTATTTTGGTTTAATACTGCAGAATCTGCAAACTTTTTTTTGCAAGTATGAGCTTCAGTGGCGCTTCTGCTGGTTCAGGTTAGTTGCTTTGCCACTTTCTCATTCCAATTCTTGTGATGATTTTAGTTTTTAGAGTTTAATATTAATAATTATGTAATGCAACCTATTGCCACTTTGCCACTACAGCTGATTTTATGCTTTATTTATGGAAATGGAATTGGGGATAGTTTTATATAGTATTATTTCATCCGACTATTGGGGGAATTTTTGAACATGTGGATTTTGGGGGTTAGGAGGACTGAATATTGACATTTGGATTTTGAAGTGGAACTTTAGTGAAGCCAACCCAAGTGATAAAATCCGTAAAGTACCTCACTATTGAATATTGTCTTAAAAGTTAAAATTAGTATACTCGTGTGGGTGAATGGGTGATCTTCTCATTTTAGTAAGAATTAAAGGGTGTCTCCCAAATACATGGAAATTTTTCGAGAATGATGAATCAGAGCTGGTGTTTTTGTTGTATAAAACTATCAGTCATGTTTACCAAACGTAGAGTGAGCTTTTGAATCAGCTTTTGAATCATCCAGCTTTGAGCGGCTGAGATGAGAAGATTGAGAACTGGTGGTGGTTTAAGTTATCATATTAGACAAAGTTAGTCTTGAAAATTTCAATTTTCTCCAGGATTAGCTAAGTTCTTGTAGTTATCTACTTGATTTTCTGTTAGTTCAATTTTTAGGTGGAAATGCTGCAAGAAAGGCATACGAGTTTGGACGGACTTATGTGGTTAGGCCCAAAGGCAAGCACCAGACAACTGTAGTTTGGCTGCATGGCCTTGGTGATAATGGGGGAAGGTAATTCTATTACATATGATGATATCTTGTTGCTTCTAGCTGTTATCATTTGTTTTTCTTTTGTAAGTTTTCAGATTTCTCTTATTTTTATATACCCTAATTGCTCTACTGGCAGAATTTGCTTCCACTCGATTTTTTTTTCTTTTTAACTATTTGGATTAATTAGAAAAGAAATCCAAGCTATCAGCACTATATGGTGTAATTTTTCCTCTCTTGTCTTTTTGGGGGGTGGCTTAGTTGTCATACTGGTTGTTGTGATCAGTTAACTAGTTATCATGTTCTAGATGATGAAAAATTGCTTAACTTTGTTATTTATTTCTTTTTGGCAGCTGGTCACAAATTTTGGAGACAATTCCTTTGCCTAATGTGAGAATTTGAATTTGAACATGATTTTATGTTACGTTCACTTTTCTAGTTATCTTCTAATTTTTTTCTGTTGTACTTTTCTGTAATGCAGATTAAATGGATATGTCCAACTGCTCCTTCACGGCCCATTAGTTTATTTGGTGGCTTTCCTTCTACTGCTTGTGAGTTGGTCACCCTGATCGTACTTAATGTTTTTCCTATGTGCAATAGCTTTTCGAGCTGTTATCAAGCTCTGAGAAATCGTTCTTTGCAGAAATCTAGATGGATTATGTAATTGCATTTGGAAAATCATTTTGAAGGCTTTTGGTTGGAGAAGGATATGTATTCCTTATTTAATTATCTATATGTATAGACATGTAGTGTATTTGAGTTCCCCAGGGGATGAGGACTTTATATATGCGCATATGATGCTATGGTCATATGCACTTGCAGGCCTTGTTGGTGGTTTATGTAATGTGCTTTAGTGTGTGAGTGCTACTTTCTTAACATGTTGAACATAATCAATCAGGTATACTTATTTGTTAGAATAAGACATAAATAACTGATTTTCATGATGAGGAATTGCTATATACTGCTCCAGAGAATCTGAATATGTATTACTTACCTTTTTTAATTATAAGATGTTGTAATCCATCTTCAATGCATTGATGACATGCCAAAAATAAAATTGCTATATTTTTCAGTGTCCGAAGTGTGTATCTGTTTCTAGTATATCTGGGATTTTATGGTCAAATATGTTGTGAAGTGGGTTGAACAAGGTCTTTTACCTTGTCTAGTTGTGCACAATGGGGGCTTATGTGCATGCTCCCACTTTGTGTAATTCTCTCTATATTTGATATGTCAATTTAATTTCATAATAAAACTGGGAATTAGCTTTTATGTACCAGAGCTGAAACTTTGCAGTTTTGAATGCTGACATAGTCGGTTGCAATGCGAATTAAATCAGGGTTTGATGTACAAGAGCTATCTGAAGATGCTCCAGATGATCAGGAGGGACTGGATGCTACAGTAGCGAATGTGGTAAATTTACTGTCTACTGAGCCCACTGACAGTAAGTTCCTCTCTCCTTATTTGTATATTTCACTGACATGTTTTTAGCTGCTTGTCTGTATCATTTAGATGATCAAAGGATGACTATTATTATTAGGTTTCATAATCATAGGCAATTTGGGAGCCTGTACTTCTAAAAGAAGTTTAAGCATACGAATGGGATTTTTTTTCTCACTTTGCCACAGTTCTCTTGGAATCCAAGAGCTGTCTGTGTGACTGGAGATTTTATTAATCAACATGGCGAAATTGTCAAGAACATTAATGTCGCTGCTGAATTCTTGCTGAGATTAATTGACACACAGTTTAATCATCTTTTGGTGGTGTTTAGTGGTGGCAGATTAACATGCTAGCTGTTTGGACTTGTATGAACCATCCTTGCATGCAGTATTCTGGATTAGAATTTGAGAAATATGCCTCTCTAGTCTCTTAGTTTGGTTGATTGACCTGAATGGCGGTGGGTCAAATGTTGTCGGAGAAACAAATGGCATTTTGATACAACCGCCATCTCTTGATATAGATTCCTTTTATTTGCAGGATTTGAGAAGGTACATCCGTACATGTACCGAACCTCCACTCTAACAGATGGATAAAGGCCTCAAAGCGTCATTTCTTCGCATTGCCGCTAACTATGGAATTAAGTTACGCTGGTCAATCCTTTGATATTTCTGGCTTTCGGGAGTCTCTTTGTAGGATACTTAGCCAAATTGTGACCTGTGTTAGCCCACCAGATTAGCTTAAAATATTTTCTTGCAAAAGCATTGATTTTTAGTTTTATTTTGATGAAATAACTAATGGAGGAAAAACACCTATTAGAGCCATGGGAGTGGATAGTTGAATCAGCTGGCTATCGGTGGGGAGAGAGTAAGGAAAGAGTGAGATGGGAAAATAATAGAATCTGGTGACAAAACCTTAGGAAGAGGATTTTTGTGTTTCATCACAAAATCACCTCATCAGATTCCATCATTCCAGTATTTGAAATTTGTTTCAAAACTATTTTCAAAGTATTGAAATTTATGTTATGACCTTTCGTTCTCAAAAACTAATAGTTAAACTCTATCCACATTTGTCGGCTTGTCGCTGTAGTCAGTTATATAACTGGTTTCCGCTAGTTTTGGTACTTGGTATTACAGCATTTCTAACTGGAGTCGTAGGCCTTCGCCAGTTTTCTGTTAATCAGAATATAATAGTGTCAGTTTTACTTTTATTCTTAGGTTGGATCCATTGTTATTCCTCGTGAAAACTGGGAAGAACCCTTAGTCATTGCCTTAATAGAGCATGATAGTGGGAACAATAGTAAACATATTGCAGTGTACTTTCCTCTGCCATTTTTTAAGATCCTTTCTGTTGTTAATTGTGATTAGTGAAGATTAGGCAATACCTTGTTCATTGGTGAATGCAATTCTTCTGTAAGAGATTCCTTCTCATTACTGTCTAAAATCTCTAAATCCCCTTTGCTGAGCTAATGTGCTCACATTTGCGTTTGTGTTTGTGTTCTTTTACAATCATTAAAACTGTTCCAACTAAGTTCAGAAACTAAACAACACTTGAGATGTAAGGCTTCCTTTAACATTTGATGGGATTTGGTATGAGTTTTCCTTTCAAGTGAAGATAGAATGAGAAAGTCAAAATCATGTGATAGATTTTCCGAGACACTCTACAACAGTATGCCAACCCTAAACCCTAACCGTTAATTTTGGGTAGACATAGTATCTATTTTCCTTCGTTCTTTGGTTGATGTTATATACTTATATCCTCCCGCCATCCCCTAAGAAACTACTCCGTAAAAAAAAGGCATGTGAACTGACAATGTGAATATGTGATACAGCTGGCTTTTGCAAATAAGTAGCATGACTGCACAAGTTTTTGAACTGTAGTTTAATGTGCATGATGTTTGATAATGCAGTTAAACTTGCTGTTGGTGGCTTCAGTATGGGTGCAGCAGCCGCCCTCCATACTGCTATGTGTCACGTGTCTGGAAAATATTCTAATGGAAACGAGTTTCCAGTCAATCTAAGTGCAGTTGTTGGGCTAAGTGGCTGGCTTCCTTGTGCTAAGTTTGGCTTCTTCTACATACACCTTTTCCCCCGTTCCTCTCGTTTTTGATGATTTTTCTCACTTCCTACAGTTCTAATCCTCATTTGGACATTTTCTCAGGAGCTTGAGCAACAAGCTATCTGCTAACGAGGCTCCAAATCGTGCTGCATCTTTACCTATATTGCTTTGTCACGGCAAAGGTATGATTTAGATTTGAAAGTTTGGGTTAAGAAAAAAGATTATGCTAACAAAAGTTTGGAGTATCAAGAATTCTAAATGATCTTGTGAATAGAACAATCCCATTGTGGAAAACCCAATTCAGACATCATCAATTCAAGGAAGTTGACTCGCTAAAGAGAAGCTTTTGTTTACACGCTAAAGCTATGCTTAAGGGATGTAATAGCTAAAGCTAGGAGCCTTAGGGCGAAGAGACTAGAAACCGTTACAAGACAGCTCTACCAATGCATCTATTGATCGTACCTATGAATACTTTATTTGCTTGCTTTATTCCTTCCTTCATGGATTACACCAACACTTTTAGAAACTATAAACGCAAAGCATTTTGTAATTGCAGCTGACGATGTTGTTCAATACAAGTTCGGAGAGAAGTCTTCGAAAGCGTTGGCTTCTAGTGGCTTTGGTGACGTCACATTCAAGTCATATGCTGGGTATAGATACATTTTTCGTGCAACCCTTTTGTCGTCTTTAG GAACGGATGCCACGCCAGAAATTGTCTCACCTCACACACACACATTACGTTCTTCTTCAACTCTCGGCTCTCCGTTTCTCCGTCCTTCCTTTCATCAGAATCTGCAAACTTTTTTTTGCAAGTATGAGCTTCAGTGGCGCTTCTGCTGGTTCAGGTGGAAATGCTGCAAGAAAGGCATACGAGTTTGGACGGACTTATGTGGTTAGGCCCAAAGGCAAGCACCAGACAACTGTAGTTTGGCTGCATGGCCTTGGTGATAATGGGGGAAGCTGGTCACAAATTTTGGAGACAATTCCTTTGCCTAATATTAAATGGATATGTCCAACTGCTCCTTCACGGCCCATTAGTTTATTTGGTGGCTTTCCTTCTACTGCTTGGTTTGATGTACAAGAGCTATCTGAAGATGCTCCAGATGATCAGGAGGGACTGGATGCTACAGTAGCGAATGTGGTAAATTTACTGTCTACTGAGCCCACTGACATTAAACTTGCTGTTGGTGGCTTCAGTATGGGTGCAGCAGCCGCCCTCCATACTGCTATGTGTCACGTGTCTGGAAAATATTCTAATGGAAACGAGTTTCCAGTCAATCTAAGTGCAGTTGTTGGGCTAAGTGGCTGGCTTCCTTGTGCTAAGTTTGGCTTCTTCTACATACACCTTTTCCCCCCAACAAGCTATCTGCTAACGAGGCTCCAAATCGTGCTGCATCTTTACCTATATTGCTTTGTCACGGCAAAGCTGACGATGTTGTTCAATACAAGTTCGGAGAGAAGTCTTCGAAAGCGTTGGCTTCTAGTGGCTTTGGTGACGTCACATTCAAGTCATATGCTGGGTATAGATACATTTTTCGTGCAACCCTTTTGTCGTCTTTAG ATGCCACGCCAGAAATTGTCTCACCTCACACACACACATTACGTTCTTCTTCAACTCTCGGCTCTCCGTTTCTCCGTCCTTCCTTTCATCAGAATCTGCAAACTTTTTTTTGCAAGTATGAGCTTCAGTGGCGCTTCTGCTGGTTCAGGTGGAAATGCTGCAAGAAAGGCATACGAGTTTGGACGGACTTATGTGGTTAGGCCCAAAGGCAAGCACCAGACAACTGTAGTTTGGCTGCATGGCCTTGGTGATAATGGGGGAAGCTGGTCACAAATTTTGGAGACAATTCCTTTGCCTAATATTAAATGGATATGTCCAACTGCTCCTTCACGGCCCATTAGTTTATTTGGTGGCTTTCCTTCTACTGCTTGGTTTGATGTACAAGAGCTATCTGAAGATGCTCCAGATGATCAGGAGGGACTGGATGCTACAGTAGCGAATGTGGTAAATTTACTGTCTACTGAGCCCACTGACATTAAACTTGCTGTTGGTGGCTTCAGTATGGGTGCAGCAGCCGCCCTCCATACTGCTATGTGTCACGTGTCTGGAAAATATTCTAATGGAAACGAGTTTCCAGTCAATCTAAGTGCAGTTGTTGGGCTAAGTGGCTGGCTTCCTTGTGCTAAGTTTGGCTTCTTCTACATACACCTTTTCCCCCCAACAAGCTATCTGCTAACGAGGCTCCAAATCGTGCTGCATCTTTACCTATATTGCTTTGTCACGGCAAAGCTGACGATGTTGTTCAATACAAGTTCGGAGAGAAGTCTTCGAAAGCGTTGGCTTCTAGTGGCTTTGGTGACGTCACATTCAAGTCATATGCTGGGTATAGATACATTTTTCGTGCAACCCTTTTGTCGTCTTTAG MPRQKLSHLTHTHYVLLQLSALRFSVLPFIRICKLFFASMSFSGASAGSGGNAARKAYEFGRTYVVRPKGKHQTTVVWLHGLGDNGGSWSQILETIPLPNIKWICPTAPSRPISLFGGFPSTAWFDVQELSEDAPDDQEGLDATVANVVNLLSTEPTDIKLAVGGFSMGAAAALHTAMCHVSGKYSNGNEFPVNLSAVVGLSGWLPCAKFGFFYIHLFPPTSYLLTRLQIVLHLYLYCFVTAKLTMLFNTSSERSLRKRWLLVALVTSHSSHMLGIDTFFVQPFCRL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08033.1 vs. NCBI nr
Match: gi|902193411|gb|KNA12295.1| (hypothetical protein SOVF_127270 isoform A [Spinacia oleracea]) HSP 1 Score: 352.8 bits (904), Expect = 5.500e-94 Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 1
BLAST of Spo08033.1 vs. NCBI nr
Match: gi|902193412|gb|KNA12296.1| (hypothetical protein SOVF_127270 isoform B [Spinacia oleracea]) HSP 1 Score: 347.1 bits (889), Expect = 3.000e-92 Identity = 169/174 (97.13%), Postives = 170/174 (97.70%), Query Frame = 1
BLAST of Spo08033.1 vs. NCBI nr
Match: gi|731353439|ref|XP_010688069.1| (PREDICTED: acyl-protein thioesterase 2 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 330.5 bits (846), Expect = 2.900e-87 Identity = 158/183 (86.34%), Postives = 170/183 (92.90%), Query Frame = 1
BLAST of Spo08033.1 vs. NCBI nr
Match: gi|731353445|ref|XP_010688073.1| (PREDICTED: acyl-protein thioesterase 2 isoform X4 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 327.0 bits (837), Expect = 3.300e-86 Identity = 154/170 (90.59%), Postives = 162/170 (95.29%), Query Frame = 1
BLAST of Spo08033.1 vs. NCBI nr
Match: gi|731353437|ref|XP_010688068.1| (PREDICTED: acyl-protein thioesterase 2 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 324.7 bits (831), Expect = 1.600e-85 Identity = 158/187 (84.49%), Postives = 170/187 (90.91%), Query Frame = 1
BLAST of Spo08033.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYG4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_127270 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 3.900e-94 Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 1
BLAST of Spo08033.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0I1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_127270 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 2.100e-92 Identity = 169/174 (97.13%), Postives = 170/174 (97.70%), Query Frame = 1
BLAST of Spo08033.1 vs. UniProtKB/TrEMBL
Match: A0A067GKS9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024379mg PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.500e-77 Identity = 138/185 (74.59%), Postives = 154/185 (83.24%), Query Frame = 1
BLAST of Spo08033.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LU24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G305760 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 4.700e-76 Identity = 133/170 (78.24%), Postives = 150/170 (88.24%), Query Frame = 1
BLAST of Spo08033.1 vs. UniProtKB/TrEMBL
Match: A0A067GYB9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024379mg PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.400e-75 Identity = 133/170 (78.24%), Postives = 147/170 (86.47%), Query Frame = 1
BLAST of Spo08033.1 vs. ExPASy Swiss-Prot
Match: LYPA2_MOUSE (Acyl-protein thioesterase 2 OS=Mus musculus GN=Lypla2 PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 8.200e-21 Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 1
BLAST of Spo08033.1 vs. ExPASy Swiss-Prot
Match: LYPA2_RAT (Acyl-protein thioesterase 2 OS=Rattus norvegicus GN=Lypla2 PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 8.200e-21 Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 1
BLAST of Spo08033.1 vs. ExPASy Swiss-Prot
Match: LYPA2_HUMAN (Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYPLA2 PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 8.200e-21 Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 1
BLAST of Spo08033.1 vs. ExPASy Swiss-Prot
Match: APT11_DICDI (Acyl-protein thioesterase 1 homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282005 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.500e-17 Identity = 49/154 (31.82%), Postives = 80/154 (51.95%), Query Frame = 1
BLAST of Spo08033.1 vs. ExPASy Swiss-Prot
Match: LYPA1_RABIT (Acyl-protein thioesterase 1 OS=Oryctolagus cuniculus GN=LYPLA1 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 4.200e-17 Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 1
BLAST of Spo08033.1 vs. TAIR (Arabidopsis)
Match: AT5G20060.2 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 278.1 bits (710), Expect = 6.100e-75 Identity = 126/170 (74.12%), Postives = 145/170 (85.29%), Query Frame = 1
BLAST of Spo08033.1 vs. TAIR (Arabidopsis)
Match: AT1G52700.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 240.0 bits (611), Expect = 1.800e-63 Identity = 109/167 (65.27%), Postives = 135/167 (80.84%), Query Frame = 1
BLAST of Spo08033.1 vs. TAIR (Arabidopsis)
Match: AT3G15650.2 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 237.3 bits (604), Expect = 1.200e-62 Identity = 114/186 (61.29%), Postives = 135/186 (72.58%), Query Frame = 1
BLAST of Spo08033.1 vs. TAIR (Arabidopsis)
Match: AT1G52695.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 122.5 bits (306), Expect = 4.300e-28 Identity = 60/158 (37.97%), Postives = 90/158 (56.96%), Query Frame = 1
BLAST of Spo08033.1 vs. TAIR (Arabidopsis)
Match: AT1G51300.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 117.5 bits (293), Expect = 1.400e-26 Identity = 63/169 (37.28%), Postives = 89/169 (52.66%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08033.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08033.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08033.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08033.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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