Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTATCTGAAAGAGGGTGACTCATACAGTCATACTCCGAATTTTTACTTATTCCATTTCAGGTTAATTGCAACATTAGGTGGAGATAAAGTTGAAGGAAAAATTTTTATCAAAAAAAAAAGCAAAAACAAAAAGTTGAAGGAAAATTTTAAAATTGTGAACTGATGAAGTGGTTTTTTAACTATGAATGTTTAGTAGATTTTTTAACAAATTGGGTTTTTTAAACTTTTAGGGCGTGTTCGGCGGCAGCTTTTGAGGTAGCGGGAAGCGTTTTGATCTAGGGCGTGTTCGACGATAGCTTTTGAGGTAGCGGGTAGCGTTTTGATCTAGGGCGTGTTTAGCGGTAGCTTTTGAGGTAGCGGGTAGCGTTTTGACCTAGGGCGTGTTCGGCGGTAACTTTTGAGGTAGCGGGTAACGGTTTGACCTATTCAAGACGCTACTTGTAAAATTTGTGAGTGTTTGGCAAGGTAGCGATTTAGGTAGCGGTTAATGGTAGAGGTAGCTTTTGTCAATCGTTAAAATTAGTACTCGGGTTTCACAAATTTAAGTAAAGTTTTAAACAATATTCTAACTTTTATTTTATTTTACAATCACAAATTCTTATTTACAATGGGTGTACAATAAATATTGTACACCAGAGTAAAAGTTAACTCAAAATGCTTAAAAGTTAAGCATACATATGTAAACGTTATCTATTTTTCAATGATAAATTTTTTCATTTTAGTAAAACTTATTTCTTCAAAATAACTAATAATGTATAAAATTAATCATTTAACCCTTTAAAATATTTATCTATCAATTTTTTTTACTAATATAAAAGTTAATCAAAACTAGGTTAAAGTTATAAAAAAAAGGTTAAAGTTATCTTGGTGTACAATAAATTTATTGTACACCTTGTGCGCACAAGATCTTTTGTTTTACAATATCAACCGCTACTTTTATCAAACACTAATATTTTACCCGCTACTTTAATAGTTATCCGTTACCCACTACTATTCACCGCTACTCGGCACTCGCTACTCTAACCACTACTCGCTTATTTTTCCAAACAAGGCGTTATTAAGTAGGAAAAGGGATTGAATGTTAATTACTTCCTCCGTAGTTTATTGAGTGGTGAGTTGATTTTATTAAACAAAGAAATAAGTGGGGTTAGTGTAGATTAAACAATTGGAGAAAAAATAGTGAAAGTATTAAAATTTATTTTTATTTTTTTGAGGGGAAGGTGAAAGTATTAAATATGACAATTCTCATTAACCTATAATAAATACGGAAAAATACAGTAATGTTGTAATGTGAATCTTGTTAGATTCATTTCAATATATTTTCGTATATTTTGGAATAATATACTTGGTACGGAACTACGGACTATATTTCAATGTAATCCAAAAAAACACACACCAAATGAGACAAAAAGAAAGGTACGAAGGAACTCAGGAAGTATTCACTTACCTAACTTACGATCGTGCTGAGATTATTAGAAGGGAATAAACATCAGAAAAAACGTTTGTTGTCCTCTCGATCTTCTCTGCCAGGTAACAATTGTTTCAATATTTCATGACTTGGGTTAATTTTTCTTCATTTCCATTCTTTCGAATTTACTTACATTTGGGTAATTAGGGTTTATATTTGATCTAATATTGTTGAATTTCTGCTAAAATTCCAATCTTTCTTCTTAGTGCTTGCTCCACATAGCCATTTAGCTTATACTTGAAATTATCTATAACTGTTAATTTTTCTGTATAATAGTTTTCTTGCTTGGAAACTAGATTGCCTCTTTAGGTTTTATCATCCGAAAACTCCAAATTCTAGGTACTAAGGTCTATTAGTGTTGATTTTTAAGTCAAAGTTGTGATATTTGACAGATTTGAGGGATCCAATTAAACAAACAAAAATGGGGGTAATTTCCGAGAAGATAGTGGAAGTGATTTCAAAATACACAGGGCTATCACCAATGTGGTTCATGATCATGGTGGGGTTGACTATAATAAGTTACAAGATAGTTAGCGGCATGTTTGTGGCGGTGAATGATTACAAAGCAGTTGAAAAGATGAAGGAAATATTCGAGGAGGATATGAGGAGGGAGGTGGTGGAGCTGGGTCAGCTGACGGAGGAGCAGCTCAAGGAATACGACGGGTCAGACCCGAAGAAGCCTCTATTGATGGCAATTAAGGGTAATATATATGATGTTTCAAGGGGTAGGATATTTTACGGGCCTGGCGGGTCATACGCTATGTTTGCTGGGAGGGATGCTACTCGGGCTTTGGCCCTCATGTCTTTTGATCCTCAGGATCTTACTGCCAACACCGACGGTCTCAGTGAATCTGAGCTTGATGTTCTTCAAGATTGGGAGCTTAAGTTTCAAGAGAAATACCCCAAGGTCGGTGTTCTTGGAGGCCAGCCGCAGCTGCAGGAGGAGGTTGTAGAAACTAAAAAAGCTGTATAGCTTACTCTTTCTAATTTCTAATTTTCTTTGTTTCATGTTTGATGATATCTCTTAATGTCAGAGAGGACCTATTATTAATCAAGTAGCTTTTGATGATATATTGATCGAACTATGTCTTATTAATCTTTCATTGTAGCTTGTTGTGGTTGACATTGCACTGATTAGCACCAACTTGTGGTTTTGAGTTTATTTGATTCTGAGTTACTCAAACTAGTCATTGCACTGATTAGCACTACCAAAATGTGATTTAGTAGTTATGTGTATATTAAGGCAACTTTGTGCGATTGGTTGAGAAGTGGACAACTTTGTGTTATTTTTGTCATATTGACAAGTTTGTGTCAATGATTGCAAATGGCCCAAAGTACATGTCCATTGATGTAATTTTCTCATAACTCCCATACTGAAGTATGCATTATAAATTGGATGTCAGTATGTCAGACACAGAGTATTATACATTTTCCTTTGTTTTTACTTTTCTCTTTTCAGCAAAATGCTTATCATTTTAGCTATTATTGTGATTTGATAATCTGCCTGGCCTTCCCAATATTTGTGGAAATTAATATAAATCTTGACTACTGTGAACATCTAAAACAGCTAGTGGTGGCCTTGATCTTAGTCGTAGGTGCTCGTTCTATTTTGATTTGAACGGGCCGAATGTTATGACTTTTAATGTGGGTCTTTTTTATGAATAAGTAGAAATCAACTTTGGTAGGGATACTAAAGAACCTTGAAGAGATTTGATCTTTTCTAGTTTGTATTGGCTGGTAAGCATTATGGTGGAAAAGTTGTGGCCTGCCCTTCAATCCTGCAAGCATCAGGTATGATTTTATTTCCTTTGTGATCCGCTCATCAATGGCAGAGTCAGATTATTAGAAAC ATGGGGTATCTGAAAGAGGAAGGGAATAAACATCAGAAAAAACGTTTGTTGTCCTCTCGATCTTCTCTGCCAGATTTGAGGGATCCAATTAAACAAACAAAAATGGGGGTAATTTCCGAGAAGATAGTGGAAGTGATTTCAAAATACACAGGGCTATCACCAATGTGGTTCATGATCATGGTGGGGTTGACTATAATAAGTTACAAGATAGTTAGCGGCATGTTTGTGGCGGTGAATGATTACAAAGCAGTTGAAAAGATGAAGGAAATATTCGAGGAGGATATGAGGAGGGAGGTGGTGGAGCTGGGTCAGCTGACGGAGGAGCAGCTCAAGGAATACGACGGGTCAGACCCGAAGAAGCCTCTATTGATGGCAATTAAGGGTAATATATATGATGTTTCAAGGGGTAGGATATTTTACGGGCCTGGCGGGTCATACGCTATGTTTGCTGGGAGGGATGCTACTCGGGCTTTGGCCCTCATGTCTTTTGATCCTCAGGATCTTACTGCCAACACCGACGGTCTCAGTGAATCTGAGCTTGATGTTCTTCAAGATTGGGAGCTTAAGTTTCAAGAGAAATACCCCAAGGTCGGTGTTCTTGGAGGCCAGCCGCAGCTGCAGGAGGAGGTTGTAGAAACTAAAAAAGCTGTATAGCTTACTCTTTCTAATTTCTAATTTTCTTTGTTTCATGTTTGATGATATCTCTTAATGTCAGAGAGGACCTATTATTAATCAAGTAGCTTTTGATGATATATTGATCGAACTATGTCTTATTAATCTTTCATTGTAGCTTGTTGTGGTTGACATTGCACTGATTAGCACCAACTTGTGGTTTTGAGTTTATTTGATTCTGAGTTACTCAAACTAGTCATTGCACTGATTAGCACTACCAAAATGTGATTTAGTAGTTATGTGTATATTAAGGCAACTTTGTGCGATTGGTTGAGAAGTGGACAACTTTGTGTTATTTTTGTCATATTGACAAGTTTGTGTCAATGATTGCAAATGGCCCAAAGTACATGTCCATTGATGTAATTTTCTCATAACTCCCATACTGAAGTATGCATTATAAATTGGATGTCAGTATGTCAGACACAGAGTATTATACATTTTCCTTTGTTTTTACTTTTCTCTTTTCAGCAAAATGCTTATCATTTTAGCTATTATTGTGATTTGATAATCTGCCTGGCCTTCCCAATATTTGTGGAAATTAATATAAATCTTGACTACTGTGAACATCTAAAACAGCTAGTGGTGGCCTTGATCTTAGTCGTAGGTGCTCGTTCTATTTTGATTTGAACGGGCCGAATGTTATGACTTTTAATGTGGGTCTTTTTTATGAATAAGTAGAAATCAACTTTGGTAGGGATACTAAAGAACCTTGAAGAGATTTGATCTTTTCTAGTTTGTATTGGCTGGTAAGCATTATGGTGGAAAAGTTGTGGCCTGCCCTTCAATCCTGCAAGCATCAGGTATGATTTTATTTCCTTTGTGATCCGCTCATCAATGGCAGAGTCAGATTATTAGAAAC ATGGGGTATCTGAAAGAGGAAGGGAATAAACATCAGAAAAAACGTTTGTTGTCCTCTCGATCTTCTCTGCCAGATTTGAGGGATCCAATTAAACAAACAAAAATGGGGGTAATTTCCGAGAAGATAGTGGAAGTGATTTCAAAATACACAGGGCTATCACCAATGTGGTTCATGATCATGGTGGGGTTGACTATAATAAGTTACAAGATAGTTAGCGGCATGTTTGTGGCGGTGAATGATTACAAAGCAGTTGAAAAGATGAAGGAAATATTCGAGGAGGATATGAGGAGGGAGGTGGTGGAGCTGGGTCAGCTGACGGAGGAGCAGCTCAAGGAATACGACGGGTCAGACCCGAAGAAGCCTCTATTGATGGCAATTAAGGGTAATATATATGATGTTTCAAGGGGTAGGATATTTTACGGGCCTGGCGGGTCATACGCTATGTTTGCTGGGAGGGATGCTACTCGGGCTTTGGCCCTCATGTCTTTTGATCCTCAGGATCTTACTGCCAACACCGACGGTCTCAGTGAATCTGAGCTTGATGTTCTTCAAGATTGGGAGCTTAAGTTTCAAGAGAAATACCCCAAGGTCGGTGTTCTTGGAGGCCAGCCGCAGCTGCAGGAGGAGGTTGTAGAAACTAAAAAAGCTGTATAG MGYLKEEGNKHQKKRLLSSRSSLPDLRDPIKQTKMGVISEKIVEVISKYTGLSPMWFMIMVGLTIISYKIVSGMFVAVNDYKAVEKMKEIFEEDMRREVVELGQLTEEQLKEYDGSDPKKPLLMAIKGNIYDVSRGRIFYGPGGSYAMFAGRDATRALALMSFDPQDLTANTDGLSESELDVLQDWELKFQEKYPKVGVLGGQPQLQEEVVETKKAV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08120.1 vs. NCBI nr
Match: gi|902106558|gb|KNA03627.1| (hypothetical protein SOVF_207300 [Spinacia oleracea]) HSP 1 Score: 356.3 bits (913), Expect = 3.800e-95 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1
BLAST of Spo08120.1 vs. NCBI nr
Match: gi|902191300|gb|KNA11814.1| (hypothetical protein SOVF_131630 [Spinacia oleracea]) HSP 1 Score: 255.4 bits (651), Expect = 9.100e-65 Identity = 131/144 (90.97%), Postives = 135/144 (93.75%), Query Frame = 1
BLAST of Spo08120.1 vs. NCBI nr
Match: gi|731316408|ref|XP_010695409.1| (PREDICTED: probable steroid-binding protein 3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 242.7 bits (618), Expect = 6.100e-61 Identity = 130/182 (71.43%), Postives = 149/182 (81.87%), Query Frame = 1
BLAST of Spo08120.1 vs. NCBI nr
Match: gi|747048057|ref|XP_011070022.1| (PREDICTED: membrane steroid-binding protein 2-like [Sesamum indicum]) HSP 1 Score: 203.4 bits (516), Expect = 4.100e-49 Identity = 103/161 (63.98%), Postives = 124/161 (77.02%), Query Frame = 1
BLAST of Spo08120.1 vs. NCBI nr
Match: gi|1021034218|gb|KZM92002.1| (hypothetical protein DCAR_020633 [Daucus carota subsp. sativus]) HSP 1 Score: 194.9 bits (494), Expect = 1.500e-46 Identity = 100/174 (57.47%), Postives = 125/174 (71.84%), Query Frame = 1
BLAST of Spo08120.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q8N3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_207300 PE=3 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 2.600e-95 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1
BLAST of Spo08120.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QX08_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_131630 PE=3 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 6.400e-65 Identity = 131/144 (90.97%), Postives = 135/144 (93.75%), Query Frame = 1
BLAST of Spo08120.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZ14_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g029570 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 4.300e-61 Identity = 130/182 (71.43%), Postives = 149/182 (81.87%), Query Frame = 1
BLAST of Spo08120.1 vs. UniProtKB/TrEMBL
Match: A0A161ZVE4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020633 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.000e-46 Identity = 100/174 (57.47%), Postives = 125/174 (71.84%), Query Frame = 1
BLAST of Spo08120.1 vs. UniProtKB/TrEMBL
Match: A0A103XQH7_CYNCS (Cytochrome b5-like heme/steroid binding domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_002882 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 8.600e-46 Identity = 94/159 (59.12%), Postives = 123/159 (77.36%), Query Frame = 1
BLAST of Spo08120.1 vs. ExPASy Swiss-Prot
Match: MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 7.800e-40 Identity = 92/182 (50.55%), Postives = 120/182 (65.93%), Query Frame = 1
BLAST of Spo08120.1 vs. ExPASy Swiss-Prot
Match: MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2) HSP 1 Score: 163.3 bits (412), Expect = 3.000e-39 Identity = 87/173 (50.29%), Postives = 118/173 (68.21%), Query Frame = 1
BLAST of Spo08120.1 vs. ExPASy Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.100e-24 Identity = 49/95 (51.58%), Postives = 72/95 (75.79%), Query Frame = 1
BLAST of Spo08120.1 vs. ExPASy Swiss-Prot
Match: NEUFC_CAEBR (Neuferricin homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.200e-17 Identity = 52/120 (43.33%), Postives = 68/120 (56.67%), Query Frame = 1
BLAST of Spo08120.1 vs. ExPASy Swiss-Prot
Match: NENF_BOVIN (Neudesin OS=Bos taurus GN=NENF PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.200e-16 Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 1
BLAST of Spo08120.1 vs. TAIR (Arabidopsis)
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3) HSP 1 Score: 165.2 bits (417), Expect = 4.400e-41 Identity = 92/182 (50.55%), Postives = 120/182 (65.93%), Query Frame = 1
BLAST of Spo08120.1 vs. TAIR (Arabidopsis)
Match: AT5G52240.1 (membrane steroid binding protein 1) HSP 1 Score: 163.3 bits (412), Expect = 1.700e-40 Identity = 87/173 (50.29%), Postives = 118/173 (68.21%), Query Frame = 1
BLAST of Spo08120.1 vs. TAIR (Arabidopsis)
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2) HSP 1 Score: 114.0 bits (284), Expect = 1.200e-25 Identity = 49/95 (51.58%), Postives = 72/95 (75.79%), Query Frame = 1
BLAST of Spo08120.1 vs. TAIR (Arabidopsis)
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4) HSP 1 Score: 82.0 bits (201), Expect = 4.900e-16 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08120.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08120.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08120.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08120.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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