Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGTTCAAACACTATGACTATTCAAAATTTCAATCCAATAGTTTTTATTTTTCCTTTTTGTACTTTTAACTACAAAAAGAAGGGTAAGGGCGTAACTAAGGCACACAAAAATCAAAATGGGAGAAGAGAGCTCAGTAAAGTTACATGGAACGTGGGTAAGTCCTTATGTGTTAAGAGCCAAACTTGCCCTCAAAATTAAGGGCATAGAGTTTGAGTTTATTGAGGAAGATCTAGCTAACAAAAGTGAGCTTCTCTTGCAAAATAACCCAGTGCAGAAAAAAGTCCCTGTTCTTGTGCATAATGGGCTACCTATCTTGGAATCAACGATCATCCTCGAATATATCGATGAGACTTGGACTCAACCCCCGCATCTCTTGCCTAAGGATCCTTACCTAAGGGCCAAACACCGCTTTTGGGTCGCCTACTTAAATCAGGTAAGCACCTCTCTTTCGGATCTTGTGTATATTCGCACTGTCAGACATAGTCACATATATTATTGTACTCCCTCTGTATTTTTTAAATCTTTATTGAACTACTTCACTTGCATCATTATTATATCAAATTTATTGATGTTTCCTTAATAATTGTGCCGATCAACACGTAATTCCTTAAAAAAATAGGAAGGGAGTATGAAAAACGTGTCAGCTTTTATGAGAAACTGACAAGTGGACAAACTGGGTGTGGTACTGGCAGGTATCAGAATTATTGGGTAAAATAGTTGAAGAAGAATTACAAGGAAAAGCAACAGAGAAGACGATGAACGAGTTGTGGAAGAAGCTGGACGTGGCTGAAGAATTAATGAAAGCTGAGATGTTCCCAAATGGCTGTCCATGTTTCCAGGATGTGAAACCCGGATATTTAGATATAGTGCTGTATTCCTTCCTTGGAACCATTGATGTCGTGGAAGAGTTCTTTGGCTATAAGTCCTTCAATACAGAAAGGTACCCGCTACTAGTGTCTTGGACTAAGGCACTCAGTCAAGTTCCTGATGTTAAAGACGCGGCCCCACCAAAGCCTAAGCTCCTTGAGCTCCTCCATGGTATGCGGCACAAGGGTACCCGCTACTAGCGTCTCGGACCAACCCTTACATGATCAATATATATGTTATCACTTTTCCTGATGCCAAAGACTTTTAAATTAACTACAGTACATATATGGTTTGTAGAATAAATTAACTACTATAGTAGTACGGTAACAAATCGTTTAGTATCTCAATCAATCATATATTTCCTCGGTTTTTTTTTACTTGCAACATTTGATATTTCGCGCTTGTCAATGCAAATATTTAGTCATTAATATCTCTAATGACTAAATATTTGACACGAGTATCCGAC AAAGTTCAAACACTATGACTATTCAAAATTTCAATCCAATAGTTTTTATTTTTCCTTTTTGTACTTTTAACTACAAAAAGAAGGGTAAGGGCGTAACTAAGGCACACAAAAATCAAAATGGGAGAAGAGAGCTCAGTAAAGTTACATGGAACGTGGGTAAGTCCTTATGTGTTAAGAGCCAAACTTGCCCTCAAAATTAAGGGCATAGAGTTTGAGTTTATTGAGGAAGATCTAGCTAACAAAAGTGAGCTTCTCTTGCAAAATAACCCAGTGCAGAAAAAAGTCCCTGTTCTTGTGCATAATGGGCTACCTATCTTGGAATCAACGATCATCCTCGAATATATCGATGAGACTTGGACTCAACCCCCGCATCTCTTGCCTAAGGATCCTTACCTAAGGGCCAAACACCGCTTTTGGGTCGCCTACTTAAATCAGGTATCAGAATTATTGGGTAAAATAGTTGAAGAAGAATTACAAGGAAAAGCAACAGAGAAGACGATGAACGAGTTGTGGAAGAAGCTGGACGTGGCTGAAGAATTAATGAAAGCTGAGATGTTCCCAAATGGCTGTCCATGTTTCCAGGATGTGAAACCCGGATATTTAGATATAGTGCTGTATTCCTTCCTTGGAACCATTGATGTCGTGGAAGAGTTCTTTGGCTATAAGTCCTTCAATACAGAAAGGTACCCGCTACTAGTGTCTTGGACTAAGGCACTCAGTCAAGTTCCTGATGTTAAAGACGCGGCCCCACCAAAGCCTAAGCTCCTTGAGCTCCTCCATGGTATGCGGCACAAGGGTACCCGCTACTAGCGTCTCGGACCAACCCTTACATGATCAATATATATGTTATCACTTTTCCTGATGCCAAAGACTTTTAAATTAACTACAGTACATATATGGTTTGTAGAATAAATTAACTACTATAGTAGTACGGTAACAAATCGTTTAGTATCTCAATCAATCATATATTTCCTCGGTTTTTTTTTACTTGCAACATTTGATATTTCGCGCTTGTCAATGCAAATATTTAGTCATTAATATCTCTAATGACTAAATATTTGACACGAGTATCCGAC ATGGGAGAAGAGAGCTCAGTAAAGTTACATGGAACGTGGGTAAGTCCTTATGTGTTAAGAGCCAAACTTGCCCTCAAAATTAAGGGCATAGAGTTTGAGTTTATTGAGGAAGATCTAGCTAACAAAAGTGAGCTTCTCTTGCAAAATAACCCAGTGCAGAAAAAAGTCCCTGTTCTTGTGCATAATGGGCTACCTATCTTGGAATCAACGATCATCCTCGAATATATCGATGAGACTTGGACTCAACCCCCGCATCTCTTGCCTAAGGATCCTTACCTAAGGGCCAAACACCGCTTTTGGGTCGCCTACTTAAATCAGGTATCAGAATTATTGGGTAAAATAGTTGAAGAAGAATTACAAGGAAAAGCAACAGAGAAGACGATGAACGAGTTGTGGAAGAAGCTGGACGTGGCTGAAGAATTAATGAAAGCTGAGATGTTCCCAAATGGCTGTCCATGTTTCCAGGATGTGAAACCCGGATATTTAGATATAGTGCTGTATTCCTTCCTTGGAACCATTGATGTCGTGGAAGAGTTCTTTGGCTATAAGTCCTTCAATACAGAAAGGTACCCGCTACTAGTGTCTTGGACTAAGGCACTCAGTCAAGTTCCTGATGTTAAAGACGCGGCCCCACCAAAGCCTAAGCTCCTTGAGCTCCTCCATGGTATGCGGCACAAGGGTACCCGCTACTAG MGEESSVKLHGTWVSPYVLRAKLALKIKGIEFEFIEEDLANKSELLLQNNPVQKKVPVLVHNGLPILESTIILEYIDETWTQPPHLLPKDPYLRAKHRFWVAYLNQVSELLGKIVEEELQGKATEKTMNELWKKLDVAEELMKAEMFPNGCPCFQDVKPGYLDIVLYSFLGTIDVVEEFFGYKSFNTERYPLLVSWTKALSQVPDVKDAAPPKPKLLELLHGMRHKGTRY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08170.1 vs. NCBI nr
Match: gi|902211218|gb|KNA16651.1| (hypothetical protein SOVF_087220 [Spinacia oleracea]) HSP 1 Score: 473.4 bits (1217), Expect = 2.300e-130 Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo08170.1 vs. NCBI nr
Match: gi|902211217|gb|KNA16650.1| (hypothetical protein SOVF_087210 [Spinacia oleracea]) HSP 1 Score: 330.1 bits (845), Expect = 3.100e-87 Identity = 164/224 (73.21%), Postives = 185/224 (82.59%), Query Frame = 1
BLAST of Spo08170.1 vs. NCBI nr
Match: gi|902211219|gb|KNA16652.1| (hypothetical protein SOVF_087230 [Spinacia oleracea]) HSP 1 Score: 326.2 bits (835), Expect = 4.500e-86 Identity = 161/228 (70.61%), Postives = 183/228 (80.26%), Query Frame = 1
BLAST of Spo08170.1 vs. NCBI nr
Match: gi|11890749|gb|AAG41204.1| (glutathione transferase [Suaeda maritima]) HSP 1 Score: 323.2 bits (827), Expect = 3.800e-85 Identity = 158/226 (69.91%), Postives = 183/226 (80.97%), Query Frame = 1
BLAST of Spo08170.1 vs. NCBI nr
Match: gi|731335051|ref|XP_010678532.1| (PREDICTED: glutathione S-transferase U9-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 316.6 bits (810), Expect = 3.500e-83 Identity = 158/224 (70.54%), Postives = 178/224 (79.46%), Query Frame = 1
BLAST of Spo08170.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAY8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087220 PE=3 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 1.600e-130 Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo08170.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAZ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087210 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 2.200e-87 Identity = 164/224 (73.21%), Postives = 185/224 (82.59%), Query Frame = 1
BLAST of Spo08170.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCX6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087230 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 3.100e-86 Identity = 161/228 (70.61%), Postives = 183/228 (80.26%), Query Frame = 1
BLAST of Spo08170.1 vs. UniProtKB/TrEMBL
Match: Q9FPL4_SUAMA (Glutathione transferase OS=Suaeda maritima PE=2 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.600e-85 Identity = 158/226 (69.91%), Postives = 183/226 (80.97%), Query Frame = 1
BLAST of Spo08170.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CAN7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g114880 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.500e-83 Identity = 158/224 (70.54%), Postives = 178/224 (79.46%), Query Frame = 1
BLAST of Spo08170.1 vs. ExPASy Swiss-Prot
Match: GSTU9_ARATH (Glutathione S-transferase U9 OS=Arabidopsis thaliana GN=GSTU9 PE=2 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.200e-45 Identity = 96/224 (42.86%), Postives = 141/224 (62.95%), Query Frame = 1
BLAST of Spo08170.1 vs. ExPASy Swiss-Prot
Match: GSTUA_ARATH (Glutathione S-transferase U10 OS=Arabidopsis thaliana GN=GSTU10 PE=2 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 2.500e-44 Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 1
BLAST of Spo08170.1 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.500e-36 Identity = 90/214 (42.06%), Postives = 127/214 (59.35%), Query Frame = 1
BLAST of Spo08170.1 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.500e-36 Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = 1
BLAST of Spo08170.1 vs. ExPASy Swiss-Prot
Match: GST23_MAIZE (Glutathione transferase GST 23 OS=Zea mays PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.500e-36 Identity = 88/215 (40.93%), Postives = 125/215 (58.14%), Query Frame = 1
BLAST of Spo08170.1 vs. TAIR (Arabidopsis)
Match: AT5G62480.1 (glutathione S-transferase tau 9) HSP 1 Score: 183.7 bits (465), Expect = 1.300e-46 Identity = 96/224 (42.86%), Postives = 141/224 (62.95%), Query Frame = 1
BLAST of Spo08170.1 vs. TAIR (Arabidopsis)
Match: AT1G74590.1 (glutathione S-transferase TAU 10) HSP 1 Score: 180.3 bits (456), Expect = 1.400e-45 Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 1
BLAST of Spo08170.1 vs. TAIR (Arabidopsis)
Match: AT2G29450.1 (glutathione S-transferase tau 5) HSP 1 Score: 151.4 bits (381), Expect = 6.900e-37 Identity = 93/227 (40.97%), Postives = 130/227 (57.27%), Query Frame = 1
BLAST of Spo08170.1 vs. TAIR (Arabidopsis)
Match: AT1G59700.1 (glutathione S-transferase TAU 16) HSP 1 Score: 148.3 bits (373), Expect = 5.900e-36 Identity = 86/226 (38.05%), Postives = 124/226 (54.87%), Query Frame = 1
BLAST of Spo08170.1 vs. TAIR (Arabidopsis)
Match: AT1G10370.1 (Glutathione S-transferase family protein) HSP 1 Score: 147.1 bits (370), Expect = 1.300e-35 Identity = 82/217 (37.79%), Postives = 115/217 (53.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08170.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08170.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08170.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08170.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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