Spo08180 (gene)

Overview
NameSpo08180
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 10925678 .. 10927595 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGATACCCAGAAGAGAAGAGAGTTTCTGGACGACATAAGCAGGTGGAGGCGCTGTTGCAATCGGCGAGAACGTCTTCTTGCAGAGGTCGTAAATGGTTTGCAGAGTGAAGGTCTTGTTTGCCATATCCTCCTTGTGTTATGGTGCGCACAATTCCCCGACTGGGATCCTCAATTTACCATTCTTTCTTTCGGTTGCTGCGCATTTTTTTTTGGCTTTTCTTGGGTGAGTTGCGCAAAACCATTAACCGCCTATGGCTAATCTGTGGACTGTCGTTATTCGTTATTCGTTATTCGATTTAATTCGGATGGGAGTCAATTAACTTTTGAGGAATAAAGCTCACAGTCTCTCTACCATATTCAAAACCGCCCCACTATTTTACATTGTTATCCTTATCTTAGCTTTTCATTTATCTCTCCTCCTAACTTTCAACTCTCTCATTATTGGAGAAAAGACCTCCACCGACCGTTCACCAGCCAACCACCACCGATTGTCACGCATTTGTTCGGAGAAAAGACCTCCATCGATTTTTTTTGTCTGAAAAAAAAAATCACATACTTATGCATTTTAAGCTTGTACCATGATACATACTTATGCATTTTAAGTTTATACCATGTCAAGAGCTTAAAATGCATTAGTTTACTGTTTACATCATGGTGTGAGCTTAATATGCATAATTCTATGTTATTTAGGGGTTTTATTTGTTATTGAATTTGAAATAATTTACCCAGAAAAAAAATTAGAGACTTATGAACTTTGAGCTTCAACAATATATAATAAATAATAAATACTCCGTAATAAAAATTATTAATTATTTTTTGGCAAGCAAGTACTAAATTTTGTTGATCACCAAAACATTTTACAACCTAACTACACTGAGACCTTGGGAAGGAAACAAAGAGCAAACAACAAAGGCTAAAAACACTTAGCCAAAACAGACCTATGCCTTTCCCATACATAGATTCATCAGTGCCAATACTTAACTTAGACAACCTATCTTTTGTTTTCAGTCTATTCAAGCCATAAAATGAACGGTTTTTTCATGAAATACCCCCGAGGTTTACAAAAACGCACCAAATACCCTCGCGTGTTTCGATTCACATAATATACCCCTATTTATCCGTACTGTTCATGAGATGCACCTAACAGTTAACGGCGTTAGTCTACCGTTAGTGGAGTTTTACTATTTTGCCCTTAATTGTGTTATGATCCCCATTTACTTACCTTCCCTTTGACAGAAACTCAAAAAAAAAAATCTCATATTCTTCTATTTCTCTCTCTTCTCCCCTGTTCTTCAAGCTTCAACCTACTCGAAACCCAGTAATTCTGGGTAGATCCTCCTGCTCTCTGGCCGCCGGCAGTGATCCGGTGTTACGCACTCACATTCGCTCTCTCAGTGTTCCTTCTCATCACTCCCTCCATTTCAATCTACGGTGATGAGGACTAATGGACGATTGCTATGATCTGCTTGGGTAATTAATATCTCTCCTTTTGTTTTTTTTGTTGTTAATTCTGTACAATTTTGTAGTTAGTGAGAATTATTTTCAGATTTTTGGTAAAAAATTTACTGATTTTTGGTAAAATTTTTTTAGGGTTTCTCAAAATGCGAACACTTCGGAAATTATGAAATGTTCATTCGTCGGATTACTTTCAAAATTCACATTCCTCAATTCACTTTCAAAATTCACTTTCAAAAGAGAAGAGAAGTCGGAAGTATCAGCGGTTAGGATGGAGATGTCGGGAGGTTGGGTCGGGTGGGTAGCCCAGATGAGAGATTGGGCGAGTTTTGTGGGGTTTCGACCGGCGATTGCAAGGGTTTTGAGAGGGGAAGAGGATGAGTTGAGGAATTTTAGGGATTCTTTGAGGACGTATTTACCTGTGAAGCCTGATGCGCCGAGTACGATGATGTCATAG

mRNA sequence

ATGGAAAGATACCCAGAAGAGAAGAGAGTTTCTGGACGACATAAGCAGGTGGAGGCGCTGTTGCAATCGGCGAGAACGGTTTCTCAAAATGCGAACACTTCGGAAATTATGAAATGTTCATTCGTCGGATTACTTTCAAAATTCACATTCCTCAATTCACTTTCAAAATTCACTTTCAAAAGAGAAGAGAAGTCGGAAGTATCAGCGGTTAGGATGGAGATGTCGGGAGGTTGGGTCGGGTGGGTAGCCCAGATGAGAGATTGGGCGAGTTTTGTGGGGTTTCGACCGGCGATTGCAAGGGTTTTGAGAGGGGAAGAGGATGAGTTGAGGAATTTTAGGGATTCTTTGAGGACGTATTTACCTGTGAAGCCTGATGCGCCGAGTACGATGATGTCATAG

Coding sequence (CDS)

ATGGAAAGATACCCAGAAGAGAAGAGAGTTTCTGGACGACATAAGCAGGTGGAGGCGCTGTTGCAATCGGCGAGAACGGTTTCTCAAAATGCGAACACTTCGGAAATTATGAAATGTTCATTCGTCGGATTACTTTCAAAATTCACATTCCTCAATTCACTTTCAAAATTCACTTTCAAAAGAGAAGAGAAGTCGGAAGTATCAGCGGTTAGGATGGAGATGTCGGGAGGTTGGGTCGGGTGGGTAGCCCAGATGAGAGATTGGGCGAGTTTTGTGGGGTTTCGACCGGCGATTGCAAGGGTTTTGAGAGGGGAAGAGGATGAGTTGAGGAATTTTAGGGATTCTTTGAGGACGTATTTACCTGTGAAGCCTGATGCGCCGAGTACGATGATGTCATAG

Protein sequence

MERYPEEKRVSGRHKQVEALLQSARTVSQNANTSEIMKCSFVGLLSKFTFLNSLSKFTFKREEKSEVSAVRMEMSGGWVGWVAQMRDWASFVGFRPAIARVLRGEEDELRNFRDSLRTYLPVKPDAPSTMMS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08180.1Spo08180.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo08180.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo08180.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo08180.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo08180.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009853 photorespiration
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005747 mitochondrial respiratory chain complex I
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo013980.71Barchart | Table
Spo188740.71Barchart | Table
Spo082580.68Barchart | Table
Spo023890.66Barchart | Table
Spo266390.66Barchart | Table
Spo144040.65Barchart | Table