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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCCTAAGGAAAGGACTACATGGGACCCTAAGGCAACAGAGACATTTCTAGATTTGTGCCTTGAAAGTAAAAGCAGTGGTAGTAGTAAGTATGATTGGGAATCCATTAAGCAGCGTTTAAATGCAAAAATTAAGTAGGAAAAATTTCGAAAAGAAAGTGGTGGAAAACTATTATAGTGATTGTAGAAACAGATTTAAGGCTTGGCATGAACTGAAGACCAAGTGGACTGGAATTGGTTGGAATGAATATGGATGTGTGCAAGTTGATACAAATTCAGAGAAGTGGAAATCTTTCGTACATGTATATTCTACCTTTTTTAGTTGCTATGTATATTCTTTTATGTATTGGTATATTAGTATATTATGTCTCGGGTCCTAAGTCGTATTTTGAGTAAACGTTGTATAAAATCATTGTATATCAAGCATGACTATAAATTCATTATATATCGAGCATGACTGAATATTTGAAACAACATTATGTTTAACAAATCATGCAAATAACATATAAATTGGGGGATTTCCCGTAGCTTCAATTTGGTCGAGCTTCCCTGCTTTCTTGTATATTCCGCTATGCATATTAACAAAAAAAATGACATGAATTTTTTGTTATTTATTTCTACATATAGCTGCATAAGGGGAGACCTTCAGCCTTCTTGAAGAGGCCTTTACCATTTGAGCGAAAGATGCAGGAACTCTTTACTGGATCATTTGCCACTGGAAATCTAGCTTGGGCTAATAATTCCACAGGCCCAAGTTTATTTGACCTAGCAAAAGTGGTAGATATTTAAGAAGGATCAGGAGACTCCAAAGATGGAGAACCAGAGGAAGGCAAAGGAGATGATAAAACTGATGGTGCTGATACAACTAATGATGCTGCTGATACAACTGATGATGCTGGTGCTGATGGTAGTAAGTCCCTAGTTAAGAAGACTTTATCCGGGGAAAAACGCAAAAGTGTTGATGTTGGACAATCATCTACCAAGAAAAGTGTGAAGGATGACCTTCAAACATGTATGGATGTTTTGAGGAAAATTATCCATTTAGGGTCCTCCAATGCACAATCAACCCCACCACCCTCTTTATGTGAGAGGATAATTTCAACTTTGCAAGACATTCCCGAAATTACAACTCATGGGAAGAGTTTCATTATTGATTGTTTGAATTACCTACGTGATCCAGAGAAGAACGGGGAAGTTTGGCTTGGTCTCCCCGATAATGAAAATAGAGTAATTTTCTTGAAGAAAAAAAATCACTTTTCCTAGTGATTTTGACACTCATGAAAATCAAAGTGTGTTTGACTGAGCTCGGCAACATTGTTTGGTTGCCAGACTTGTTTTGAATTTTACTTGTGTTGGAGACTACTTATTTCTAAAACTTATTTCAACTTTTATGGATGTTTGATTTCAGTTTGATTTGGCTTTGTTGGTTAGCCTGACTGCTATTGGAAATGTTTGGAAATTAACAACATTGATGCAAGGATAGATGCCTCCTAAGGAAAGGACTACATGGGACCCTAAGGCAACAGAGACATTTCTAGATTTGTGCCTTGAAAGTAAAAGCAGTGGTAGTAGTAAGTATGATTGGGAATCCATTAAGCAGCGTTTAAATGCAAAAATTAAATTTAAGGCTTGGCATGAACTGAAGACCAAGTGGACTGGAATTGGTTGGAATGAATATGGATGTGTGCAAGTTGATACAAATTCAGAGAAGTGGAAATCTTTCGTACATCTGCATAAGGGGAGACCTTCAGCCTTCTTGAAGAGGCCTTTACCATTTGAGCGAAAGATGCAGGAACTCTTTACTGGATCATTTGCCACTGGAAATCTAGCTTGGGCTAATAATTCCACAGGCCCAAGATCAGGAGACTCCAAAGATGGAGAACCAGAGGAAGGCAAAGGAGATGATAAAACTGATGGTGCTGATACAACTAATGATGCTGCTGATACAACTGATGATGCTGGTGCTGATGGTAGTAAGTCCCTAGTTAAGAAGACTTTATCCGGGGAAAAACGCAAAAGTGTTGATGTTGGACAATCATCTACCAAGAAAAGTGTGAAGGATGACCTTCAAACATGTATGGATGTTTTGAGGAAAATTATCCATTTAGGGTCCTCCAATGCACAATCAACCCCACCACCCTCTTTATGTGAGAGGATAATTTCAACTTTGCAAGACATTCCCGAAATTACAACTCATGGGAAGAGTTTCATTATTGATTGTTTGAATTACCTACGTGATCCAGAGAAGAACGGGGAAGTTTGGCTTGGTCTCCCCGATAATGAAAATAGATTTGATTTGGCTTTGTTGGTTAGCCTGACTGCTATTGGAAATGTTTGGAAATTAACAACATTGATGCAAGGATAG ATGCCTCCTAAGGAAAGGACTACATGGGACCCTAAGGCAACAGAGACATTTCTAGATTTGTGCCTTGAAAGTAAAAGCAGTGGTAGTAGTAAGTATGATTGGGAATCCATTAAGCAGCGTTTAAATGCAAAAATTAAATTTAAGGCTTGGCATGAACTGAAGACCAAGTGGACTGGAATTGGTTGGAATGAATATGGATGTGTGCAAGTTGATACAAATTCAGAGAAGTGGAAATCTTTCGTACATCTGCATAAGGGGAGACCTTCAGCCTTCTTGAAGAGGCCTTTACCATTTGAGCGAAAGATGCAGGAACTCTTTACTGGATCATTTGCCACTGGAAATCTAGCTTGGGCTAATAATTCCACAGGCCCAAGATCAGGAGACTCCAAAGATGGAGAACCAGAGGAAGGCAAAGGAGATGATAAAACTGATGGTGCTGATACAACTAATGATGCTGCTGATACAACTGATGATGCTGGTGCTGATGGTAGTAAGTCCCTAGTTAAGAAGACTTTATCCGGGGAAAAACGCAAAAGTGTTGATGTTGGACAATCATCTACCAAGAAAAGTGTGAAGGATGACCTTCAAACATGTATGGATGTTTTGAGGAAAATTATCCATTTAGGGTCCTCCAATGCACAATCAACCCCACCACCCTCTTTATGTGAGAGGATAATTTCAACTTTGCAAGACATTCCCGAAATTACAACTCATGGGAAGAGTTTCATTATTGATTGTTTGAATTACCTACGTGATCCAGAGAAGAACGGGGAAGTTTGGCTTGGTCTCCCCGATAATGAAAATAGATTTGATTTGGCTTTGTTGGTTAGCCTGACTGCTATTGGAAATGTTTGGAAATTAACAACATTGATGCAAGGATAG MPPKERTTWDPKATETFLDLCLESKSSGSSKYDWESIKQRLNAKIKFKAWHELKTKWTGIGWNEYGCVQVDTNSEKWKSFVHLHKGRPSAFLKRPLPFERKMQELFTGSFATGNLAWANNSTGPRSGDSKDGEPEEGKGDDKTDGADTTNDAADTTDDAGADGSKSLVKKTLSGEKRKSVDVGQSSTKKSVKDDLQTCMDVLRKIIHLGSSNAQSTPPPSLCERIISTLQDIPEITTHGKSFIIDCLNYLRDPEKNGEVWLGLPDNENRFDLALLVSLTAIGNVWKLTTLMQG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08260.1 vs. NCBI nr
Match: gi|731368238|ref|XP_010696033.1| (PREDICTED: uncharacterized protein LOC104908607 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 305.8 bits (782), Expect = 7.900e-80 Identity = 166/291 (57.04%), Postives = 204/291 (70.10%), Query Frame = 1
BLAST of Spo08260.1 vs. NCBI nr
Match: gi|902196240|gb|KNA13078.1| (hypothetical protein SOVF_120050 [Spinacia oleracea]) HSP 1 Score: 176.0 bits (445), Expect = 9.500e-41 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 1
BLAST of Spo08260.1 vs. NCBI nr
Match: gi|731349669|ref|XP_010686113.1| (PREDICTED: uncharacterized protein LOC104900395 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 139.8 bits (351), Expect = 7.500e-30 Identity = 82/176 (46.59%), Postives = 100/176 (56.82%), Query Frame = 1
BLAST of Spo08260.1 vs. NCBI nr
Match: gi|731378476|ref|XP_010668189.1| (PREDICTED: uncharacterized protein LOC104885185 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 134.4 bits (337), Expect = 3.200e-28 Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = 1
BLAST of Spo08260.1 vs. NCBI nr
Match: gi|731335299|ref|XP_010678656.1| (PREDICTED: uncharacterized protein LOC104894178 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 134.0 bits (336), Expect = 4.100e-28 Identity = 95/285 (33.33%), Postives = 139/285 (48.77%), Query Frame = 1
BLAST of Spo08260.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0P7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_120050 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 6.600e-41 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 1
BLAST of Spo08260.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5V0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108540 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.300e-25 Identity = 103/271 (38.01%), Postives = 141/271 (52.03%), Query Frame = 1
BLAST of Spo08260.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTN0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g041490 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.800e-20 Identity = 85/267 (31.84%), Postives = 131/267 (49.06%), Query Frame = 1
BLAST of Spo08260.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2A2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_120050 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.300e-17 Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08260.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08260.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 4
BLAST of Spo08260.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo08260.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
RNA-Seq Expression
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