Spo08275 (gene)

Overview
NameSpo08275
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRNA-binding protein 45
LocationSpoScf_01367 : 4671 .. 12989 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCACGCGCGGCTCGGCCCAGCAGCGCTGGCACGCGACCCATTGCAAGGGCACTGCCAGCTGCTGGCCTTGCCTTGCTCGCTGGGCCTGGCCTTGCTTCATGCTCGGATGGGCCTGCTTGCTTGGAGGGATGCGCTGCTGTTGCTGCTCGCTTGCACGGGCTTTGCTAGGCGCGGGCCTGGCTTCGTGCTGGGCCCTTGCGTCTAGCAAGCTCGTCCGATGTTTATTTCGTACGTCGTGCTTCCGATTCGTTTTCGGATTAAGGAGTTCATTTCCGATTCGAACAATATTTAATGTTTTCGATTCCGGAATTTATTTCCGTATCGAACAAATATTTAATATTTCTGATTCCGGAATTTATTTCCGATTCCGATAATATTTCCGATTCCGGCAATATTTCCGATTCCGACAATATTTCCGTTTCCGGCAATATTTACGATTCCGGCAATATTTCCATTCCCAATATTATTTTCCGATACGTACCATGTTTCCGTTTCCGGCAACATCTACGACTTGGATAATATTTATATTTCCGATACGATCCATATTCCGTTTCCGGCAATATCATCGTTTCCGGAGTATTCATAATTTGCCTTTTGACGATTTCAGCGCCCACTGGAACCGAGATTCGCCGATTCCGAATATCGATGAATGGAGTATTTAATTCACTTGAATACTTGATCCGTTCACGTACTATTTGTGTGACCCTACGGGTTCAGTCAAGAGTAAGCTGTGGATTAATATTATTAATTCCACTCGAACTGAAGCGGCCTCTAGCTAGGCATTCAGCTCACTTGATCTCACTGAATTATTAACTTGCATCATGAATTAATACTGAACAGCATTTATTAGACATAGAATTGAATGCATACTTGGACCAAGGGCATTATTTCCTTCAATTTCATGTCTTTTAGTCAATGGTTTTTGCCATAATGACCCTATGACGATCCATCAATTGCATTTGCGTTTTTATGTTTTTTTAATAAAATATCCCCCTTTATTTCTTTATTCATTTATCTCTCTTCTATTTATTCTAAAAGTAGAATCGTTTAACTTTAATCATAACTCTTACACCCAATCATACTGAGATTCCATTTTTCTTAATCCCATCCCCGATTCCATATGGGAAGAACATAAGGTAACAAAGGGAGTATCAATAAGGAACAAGGGTGTTCGTAGCCTAAAACGAGATCTAGCAAACACAAGCTAGTAAGATTATGAGAACACAATATATTTCTAATATTACCTTGCAACGGGAAATTTATGTTATTTATCGATTTCATCACCCTTTATAATTGTTCACATAATTAATTTGTTCGATCATGCATAATTAGATATTCTTGACAAATTGGTATATTTTGGTAAGCATCTTGAATAAATCTAAATCACCCTTTTGACATATTGATTAGTCTATAATTATTTATACATTCAAATCAATTCAATAGTAATGTAGACAATGCACCTCCATGCATTGAATCATTACACAAAGTTTTTGGACACTGCATGTATTAGTAACTTTACCCCCGAACCCAATTCTACTATGCGCACGTATGTTGGGGTGATCCCCATACGAAATCACAAGGGAACTTATTGGATTTATGATCAAACATTTGAGCCTTGCATATCTTGCATGTGTGTTACCCTTATATCGCAAGTACCGAGTTTTATTAGTTTTCGGCAACAAGACTAAAACTATATGGCTGATCCATAAACTAATTAAAGTATGATAAGTCCCTTCTTAAATCAAAAATATTCACTCTAACATAACAATGCAAAGCACGCGTTTTCCCCCTAAAAAGGGCGGGTGCGGGCTATTTGACCCCTCCAAGATTGAACATAAGGTTGTATTCCATTTATAATTCTCCTTAATTCTAGCAACATTATCATTTGTCAGTAATACCCTTTACAATTATCTGGTTAGGGGTGTTAATGAGCCGAGCCGAGACCGAGCCCTTATAGGCTCGGCTCGAGCTCGAAACTCATGAGCACATGCTCGGCTAGATCTTGAAGCTCGTCGAGCCAGGAAAATTGGGCTCGAGCTCGAATTTTTTTAATCGAGCTCGATACGCCTAAAACTTTGAGCTCAAAACTTTAAACCGAGCATGGTTTGGCTCGAGGCTCATTAGTCTCGATGAAAGTCTCAACATCAATATTTACATTACACAACCGGTTTTCCTGCCTTTACATAGATTAAAACAAATAATATCTTACCTAAAGTAACTAAAAATATAAATTACCAGACATATTTAAACATGCAAAAAAAAATAAGAGAGAAAATGAATTATCTACATCCTCTAGAACTACAAATGCAAATAAAGATGGGAGGTTGTCGGTCGACGGACCCCGTAGACTTAAGATTCTCCGTTCTTCGGTCGTCGAAGGTGGAAGAGGATCATTGCAGAAGTGCAGAGCAGACAAGAACTTCGCGTGCCGACGGCTAGGATTATTACATTTTTTTTAAGGTGAAGAGTACATTACATTTTTTAAGGTTATATGTTTGGTATTTTGGTTAAATAAACTCTTTTTTTTATTTAAGTCCTAAGGCCCAAATACGTAATATAGTTTCTACGGAATATCTAGTAGCTTTTTAAATGTATGTAATTTTTTTGTAGAAAATTATTTATATTAAAAATATTTTATAAATATGAATATTTAAAAAAACTCGAGCTTGCTAACTAGATTTTGAGCAGTGCCAAGGGTAGCTCGGGCTTGGCTCGTTATGATTTCGAGCCGAACACGAGTTCGAGTCGAGTTCGCTCGAGCCGAGCTTTGACAGAACTTTGACGAGCCGATCATCAAATAGTTCACGAGCAGGCTCGGCTCATTAACACCGCTAGTCCTGGTTATTCTCAATGTGCTTGTTTTATTCATTTTAGAGCTCTAAATGAATAAATAAGTAAGTAACAGAGTTCATTTCCCTATAAAAAAATAAGTAAAAGAGTGGAATGAAATTGACTATGAACATCCTGGATTTAAGAAGCAACTTATAAAAATGTAAAATTTAATTATATTCCCTCCGTATTTAATTAAAAGATACACTTTCAATAATTGGTTGTATTTATTTAAAAGATACACTTTCTATTTTTGGCTTGTCATTGTTCCCACTTTCAATTTTATTAATCGATATTTCTCTCTCTTGTGGTCCCCACACTTACTCACAATCTCTTTTTAATATAATAAATAATTCACTCATTATAAATTCTTATAATAAGTAATAACCTAATACCAAACTTTCATCTTATTTTAATAAATTCAATCCACCCTCCTAAAACTACATGCAGGTCAAACTATATATTTTAGTTAAATACGGAGGAAGTAACAAGGAGTTAATAAAATTAAATAAGTTTCAAGTAATTACTACTCCATACTTCGTAATCCTAACACTTATCCTAACACTTATAAAAGCAAGGAGTTGATATTACTATTCCCACAATAGTGAAGTTACAAAATTACCCCCATTTTCCTTCCTTCTTTTTTTTGTCTTTTACCTTACAGACAGTGTATTTACCTAATTACCCTCTCCTGTTATACGCTGCTGCGTGTCCCTTTCACCCTACAACCAAGATCTCCTCCCTAATCCTCCTTAACCTGCTGCTTTCCCCCGTTGTTACTTTCTCCTACTCAAAGTGAGAATGATGAGTTTCTTCTCATCTCATCAATGTTATATGCCAATATCTCTTGGTTTCTATCATTGTTTTCTTCAGGTTAGGGTTAGATTTAAGGATCGTATTTTCATCGTTGTCGACTTCAACGATTAAGACTATGCTAACATCTTTCCTCTCTTGAATAATTTGGTAATCTCCGCCTCTACACTCAATTGCAGATTAATCTAGGGTTTTCTTCGTTTAAATGCCGACTCACTTGGTGTATCATTTTCTTAAAATTCGATTAATTTAGAGTTTTTACTTCTCCCAAATTCATTTAGTTATGTATATATATCTTGAAATTCGGTTCATTTGGGTTAATGTTATTGTTCATTGATCAATTTTGGTTGGCGGTTGTGTGTTTTGATGTCGTATTTTGGTTCTTTCAGTTGCTAAACTGAATATTATTGCTATATTTGTTTAAATTCGAATAATTCAGGGTTTTCTTCTCTCTCAACTCATTTTTTAATGTATATATTTCTTGAAATTTAATTCATTAAGGTTAATGTCATTGTCCATTGATCAATTTTGGTTGGGGTTGTGCGTTGATGTCGTGTTTTCGTTCTCTCAGTTGCTAAACCGAGTATAATTGCTATAAATTGGAGAGTTTTTCATTCCTATAATTTTCATTCATATACTTTGAATGTTTATTTTCTTCCCACAATTGGTTTGATAACTTGTCTCAACTAAGCTTGGTTGAACGAGTTGTGATGGAGGCTAAACTTGTATGCTTAGATCGAACCAGTTTGGTATTCAACTTTTTCGGAGCTCGTACCTTTCCCACATTCCTGCTTGTTGAAAACTAATTTCCGGCCTTTGAGTTTTTCATCAGGTACTTTTACTCACATTTTTTAACTCTATTAATCTCATCTTTAGTCTTTGTGTACCATTTCTTACTTCTTTGGGATGACAAGTTGTTATTTTTAGAGCTGTAATTGTTTTGTGTTGTGATCTTTAATTATAGAAGTATGCTTGCAAACTTTCGGTTCATGTATGTATGATGCGAAAGCTAGTTCCCTTTCCCGCAGCTGTTTAATCTTTGTTGGAATTGTTGCTTTCGCTATGAATCACGAAGAGTATTGTTTTTACTATTGTAACAAAAGTTAATGGTATAAGGGTATGCATGATGTTTTTAAAAGGCTTGCTAATACAAGCTATATTACATGGATACTTGGCCTTCTAACATAGGTATATTCATTTGGAGGCTTGAGACAAAAGATTCTATTATTTCCTAAAATAGCCAAGTCCGACACCCGTACGAAGTGACATATACCCTGTATTTATTTACGATGGTAGGGGAGTCCATGTACAATACTTACTAATAGAGACTTTTAGTTTGTGTTGATCAAAGCCTCAAAAGGTTCTAACACAGTCACATATACCGTTGATCTTCCTGTTATACCTCTCAATCCCCCAAATACTATATTCAAATGTTTGAAAGAGGTTTTCACCCTTCTTTTTATAATAATGGTCTATGGCTAACTTTCCCAAATGACCCTACTTAAATTGAGTGCAGAGATTGTAGAGTGTGGGAATAACACAATTATTATACACGACAATTTAGTACATTGTGTCATATCCCTGAGCCTAATTGTGATGAGCTGAGACAATGCGTGCAGACAACGACTGTTTCTGGATGAAGGACTGGTAAACTAAATAATTTTTTTCCGTTTCATGTACCCAAACATACCATATAGCAGTTAGTGCTGGTGCAAACTGAAACTTTTCCTGATAATGTTCTCCTATTTTCTAATTTTGGTGATTAAATTTGTTTATTTTGGGTGTATTACTTTCGTGAAGTACTCTGTACTGTTATCTTAACTCACCTACTGGTTCGTTTGTGTTCTTGGGGTTTTACTTGAATTACGTGGTTCAATTGTGTGATGTTTTGACGTCATTCTTAGGATCAATGAGCAACGAGGTGAAATGTGTCTTGAAGTCTTAAAAATTATCCGAACTTTATGTATCCGAGGTTGATAATCTGAAATGTTATCCCCGCGTTGATTTTCCTTATATTTTTAGTGCGGTGAGCTATTTCTTCCTTTATTGATTTTCCCTTTTCATCCATATGCTTCCTTTTTTTATGTATTTGATTGTGGGGTAAGTGCTATCAAATCATCATTTTATCTGGGTTCTGCTAAATTTAATGTATTCATGCTATATTTGATTGTGGGTAGTGATTTTCAGTCGTTATGTAGTTATTTTATATGGGTCTCTAATTATGGTGATTTTCCAATCTCGATGGTTAAATTGTGGTTTTGGTATCCTTTGGATGTCGAAACAATACAATAGTGGCCACCAAATGGAAAATTCAATTCCACTTTTCTGGAGTGACAAAGTATGTTGGTTGTAAAGCTAGCATTAATGCATGGTGTTTTGTGCCTCAGTTCATACTCTTTGGATTGGAGACTTGCAGTATTGGATGGACGGGAATTATATTTGCAATTATTTTGCCCATACCGGCGAGGTATATCAAATATAATGTTTATAATTGTTTATTAAATCCTTGTGTTCGCTTCCATGTTACAGCTTAACTTTTAACAAGCTTAACTAATGCTCCTACAGCTTGCAGATTTCCATGTCAATATCGTTCGTAATATACAAACCATGCAGTCTGAGTGTTACAAATTTCTTGAGTTTACTACTCATGTTGCTGCTGAGAGGATTCTGCAGACTCTGAATAATACTTTGATGCCATGTTGAGTAAAACTACAAACTGGATTGGGCTTTCTATGGAACTGGTGAGAAAAGGGGAGAGGATGCTTCTGATTATACAATTTTTGTCAGAGATTTAGCTGCAGATGTTACTGATTGCACATTGCAAGAAACTTTTAGAGTTCGCTATCTGTCAGTTAAAGGTGCGAAGGTTGTCAATTTGTCATAGATAGGCAAACTGGTAGCGCTAAGGGTTATGGATTTGTTCGTTTGAGAGATGAATGGAATGATGTGTCCAGGGCGTGCAATGTGTATCGGAGCTGCTGCAAACAAGAAAAGTTTTGGTGGAACAGGTATGTGTTTCCAGTCAGAGTGTTAAACGTGACTTCAAATGACAGTGTTTTATTTTGTCCGTGTGCATGAACTTCTCTGGTTTTTTGAATTTGTACAGTACCTTCATTTTTTTTTTGTATGTTATTCATAACCTAAAGTTGGTTAGTTGGGAAGCATGGTGGTTGATTTCACTTTATGTTGGATATTTTTATTTGGGTCTCCTACATTCACTTGAAGATGAGCAGAAATTTAGTTCCACTGCTTTCCTTTCAGAATTTGGGAACAATTAATTGCAAACTGAAAATCTTATATAACTCCCATTGTCTCAAAGCAGGGCGCCAAGAGGCTCTATCATTTAGGGCCTGGGAAATGGTTACCTCCTTAGTATGTTGCCTTGTGTAGGTCAGTAATGTCACAGATATTTCATTTCCCGCAGCTTTCAGTGTTAAAATTTATTCTTCCATTCAGTTTCATATATTATAAAAAAATACAACGGTTAGTTTACTTCAATTTCATTTACGATTCAAGATGTCATTAACTTATTCATATTTCTTTCGCTTAATTAAGAATTTTCTTAATGATCCTTTTCCCTCTTTTATCATTTTCATATTCTTATTCTCCAAGTCCTAGCTTGTACTCTTTTTCTTCTTTCATAGTCAGATTTATCTTGTCTGCATTTGCTTCCTTTTTAAAAAAACATCTACATGAGAGTGTGTCATAATAAAGTTATGAACTTCTTAAAACACTCATTAGTTTAGTTGCTGAGTTTTATTGGTTCCTACATTATTATCATCCTCTGGGGTGTTTAACTAGGTATCAGTTCCAAGCAATACTGGAATTTATTTCTGTTCTCTAGAATTTTCTCAATGTATATATTTTGTCATCCTCTTGGCCTCTTGGGGTGCTTAACTACGTATGTAGTTCCAATCATACTGGACTTAACTACGCATTGCAAAGAACAGGCAAATGCCATCATCAAGGCTTCAATGGTCTAACAATTGCAATGCTCTTCTAGGTATATGTATAGATATACTGTAAGTAATTCGCATGACTTTGTGCGATTTTTCTAACTGAAATGGGGTTGATTTATTGCAATGGTCTAGGCCATCTCCTATGCATTAATGGGGTCAGTAGGTTCTAAATATCTTTTCGCAAGAGAGATCAAGCATATTTTTTACATTGACCTTCATGCACATTGTGAAAAATCGAATTATTTTATTGCTCTTATGTTGATGCATCCAAGTAAACTGACGCGTGTGTAATTATTTTTCTATAGAAAGATAACTGAAATGGATACATCAAGCAAGAGACAAAAGAAGGCAATGGATCAACTAATTTACAACATTGCATGTGGACACCTGTGGTCTTTCGGACGAGGGATATGAGGATACAAATTCTGCCATTGATGTTCAAGTGCTTAATTACCAGAATGTTTTAGAAGTTATTCACGTTTATTGATTTATACGAAACAGATGTTATTGTTGCATCTAGAGTTGATACTTATCAAGATGTATGAGTCCTATACAAATAAGTCGTTTTAACCTTTTAGGTTAGGTCAAGTTTTATCTCTAGGCTCTTGCTTGTTAGCATCGACTAATGGTTATCAACTCTTTGTAAAGGACTGACTAGAATGAAAACACCTATGGTAATTATAGCTGAATTATAATATATTTTTAAAATAATAT

mRNA sequence

ATGTGCACGCGCGGCTCGGCCCAGCAGCGCTGGCACGCGACCCATTGCAAGGGCACTGCCAGCTGCTGGCCTTGCCTTGCTCGCTGGGCCTGGCCTTGCTTCATGCTCGGATGGGCCTGCTTGCTTGGAGGGATGCGCTGCTGTTGCTGCTCGCTTGCACGGGCTTTGCTAGGCGCGGGCCTGGCTTCGTGCTGGGCCCTTGCGTCTAGCAAGCTCGTCCGATGTTTATTTCACTATGCTAACATCTTTCCTCTCTTGAATAATTTGATCGAACCAGTTTGGTATTCAACTTTTTCGGAGCTCGTACCTTTCCCACATTCCTGCTTGTTGAAAACTAATTTCCGGCCTTTGAGTTTTTCATCAGTTCATACTCTTTGGATTGGAGACTTGCAGTATTGGATGGACGGGAATTATATTTGCAATTATTTTGCCCATACCGGCGAGCTTGCAGATTTCCATGTCAATATCGTTCGTAATATACAAACCATGCAGTCTGAGTGTTACAAATTTCTTGAGTTTACTACTCATGTTGCTGCTGAGAGGATTCTGCAGACTCTGAATAATACTTTGATGCCATCTGCAGATGTTACTGATTGCACATTGCAAGAAACTTTTAGAGTTCGCTATCTGTCAGTTAAAGGGCGTGCAATGTGTATCGGAGCTGCTGCAAACAAGAAAAGTTTTGGTGGAACAGAAAGATAACTGAAATGGATACATCAAGCAAGAGACAAAAGAAGGCAATGGATCAACTAATTTACAACATTGCATGTGGACACCTGTGGTCTTTCGGACGAGGGATATGAGGATACAAATTCTGCCATTGATGTTCAAGTGCTTAATTACCAGAATGTTTTAGAAGTTATTCACGTTTATTGATTTATACGAAACAGATGTTATTGTTGCATCTAGAGTTGATACTTATCAAGATGTATGAGTCCTATACAAATAAGTCGTTTTAACCTTTTAGGTTAGGTCAAGTTTTATCTCTAGGCTCTTGCTTGTTAGCATCGACTAATGGTTATCAACTCTTTGTAAAGGACTGACTAGAATGAAAACACCTATGGTAATTATAGCTGAATTATAATATATTTTTAAAATAATAT

Coding sequence (CDS)

ATGTGCACGCGCGGCTCGGCCCAGCAGCGCTGGCACGCGACCCATTGCAAGGGCACTGCCAGCTGCTGGCCTTGCCTTGCTCGCTGGGCCTGGCCTTGCTTCATGCTCGGATGGGCCTGCTTGCTTGGAGGGATGCGCTGCTGTTGCTGCTCGCTTGCACGGGCTTTGCTAGGCGCGGGCCTGGCTTCGTGCTGGGCCCTTGCGTCTAGCAAGCTCGTCCGATGTTTATTTCACTATGCTAACATCTTTCCTCTCTTGAATAATTTGATCGAACCAGTTTGGTATTCAACTTTTTCGGAGCTCGTACCTTTCCCACATTCCTGCTTGTTGAAAACTAATTTCCGGCCTTTGAGTTTTTCATCAGTTCATACTCTTTGGATTGGAGACTTGCAGTATTGGATGGACGGGAATTATATTTGCAATTATTTTGCCCATACCGGCGAGCTTGCAGATTTCCATGTCAATATCGTTCGTAATATACAAACCATGCAGTCTGAGTGTTACAAATTTCTTGAGTTTACTACTCATGTTGCTGCTGAGAGGATTCTGCAGACTCTGAATAATACTTTGATGCCATCTGCAGATGTTACTGATTGCACATTGCAAGAAACTTTTAGAGTTCGCTATCTGTCAGTTAAAGGGCGTGCAATGTGTATCGGAGCTGCTGCAAACAAGAAAAGTTTTGGTGGAACAGAAAGATAA

Protein sequence

MCTRGSAQQRWHATHCKGTASCWPCLARWAWPCFMLGWACLLGGMRCCCCSLARALLGAGLASCWALASSKLVRCLFHYANIFPLLNNLIEPVWYSTFSELVPFPHSCLLKTNFRPLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHVAAERILQTLNNTLMPSADVTDCTLQETFRVRYLSVKGRAMCIGAAANKKSFGGTER
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08275.1Spo08275.1mRNA


Homology
[Close]
BLAST of Spo08275.1 vs. NCBI nr
Match: gi|902184772|gb|KNA10364.1| (hypothetical protein SOVF_145010 isoform A [Spinacia oleracea])

HSP 1 Score: 136.3 bits (342), Expect = 6.600e-29
Identity = 89/189 (47.09%), Postives = 95/189 (50.26%), Query Frame = 1 

		  

Query: 116 PLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTT 175
           P +   V TLWIGDLQYWMD NYI N FA TGEL++  V I+RN QTMQSECY FLEFTT
Sbjct: 77  PATAEEVRTLWIGDLQYWMDENYIRNCFAPTGELSN--VKIIRNKQTMQSECYGFLEFTT 136

Query: 176 HVAAERILQTLNNTLMPSADV---------------------------------TDCTLQ 232
           H AAERILQTLNNTLMP+ +                                  TD TLQ
Sbjct: 137 HAAAERILQTLNNTLMPNVEQNYRLNWAFYGTGEKRGEDASDYTIFVGDLAADVTDYTLQ 196
[Close]
BLAST of Spo08275.1 vs. NCBI nr
Match: gi|902228160|gb|KNA21001.1| (hypothetical protein SOVF_047040 isoform A [Spinacia oleracea])

HSP 1 Score: 126.7 bits (317), Expect = 5.200e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

		  

Query: 134 MDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHVAAERILQTLNNTLMP 193
           MDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHVAAERILQTLNNTLMP
Sbjct: 1   MDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHVAAERILQTLNNTLMP 59
[Close]
BLAST of Spo08275.1 vs. NCBI nr
Match: gi|731369905|ref|XP_010665562.1| (PREDICTED: polyadenylate-binding protein RBP45-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 120.9 bits (302), Expect = 2.900e-24
Identity = 81/189 (42.86%), Postives = 91/189 (48.15%), Query Frame = 1 

		  

Query: 116 PLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTT 175
           P +   + TLWIGDLQYWMD NYI   FA +GEL +  V I+RN QTMQSECY F+EF+T
Sbjct: 75  PANADEIRTLWIGDLQYWMDENYIRTCFAQSGELVN--VKIIRNKQTMQSECYGFIEFST 134

Query: 176 HVAAERILQTLNNTLMPSA-------------------DVTDCTLQ-------------- 232
           H AAERILQT NNTLMP+                    D +D T+               
Sbjct: 135 HAAAERILQTYNNTLMPNVEQNYRLNWAFYGSGEKRGEDASDYTIFVGDLAPDVTDYTLQ 194
[Close]
BLAST of Spo08275.1 vs. NCBI nr
Match: gi|1012004966|ref|XP_015941275.1| (PREDICTED: polyadenylate-binding protein RBP45 [Arachis duranensis])

HSP 1 Score: 116.7 bits (291), Expect = 5.400e-23
Identity = 69/149 (46.31%), Postives = 81/149 (54.36%), Query Frame = 1 

		  

Query: 115 RPLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFT 174
           +P S   V TLWIGDLQYWMD NY+   FAHTGE+A   V ++RN QT QSE Y F+EFT
Sbjct: 59  QPASADEVRTLWIGDLQYWMDENYLYTCFAHTGEMAS--VKVIRNKQTSQSEGYGFIEFT 118

Query: 175 THVAAERILQTLNNTLMPS---------------------------------ADVTDCTL 230
           +  AAERILQT N T+MP+                                 ADVTD  L
Sbjct: 119 SRAAAERILQTFNGTIMPNGGQNFRLNWATFSAGERRHDDSPDYTIFVGDLAADVTDYHL 178
[Close]
BLAST of Spo08275.1 vs. NCBI nr
Match: gi|1021472393|ref|XP_016196180.1| (PREDICTED: polyadenylate-binding protein RBP45 [Arachis ipaensis])

HSP 1 Score: 116.7 bits (291), Expect = 5.400e-23
Identity = 69/149 (46.31%), Postives = 81/149 (54.36%), Query Frame = 1 

		  

Query: 115 RPLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFT 174
           +P S   V TLWIGDLQYWMD NY+   FAHTGE+A   V ++RN QT QSE Y F+EFT
Sbjct: 59  QPASADEVRTLWIGDLQYWMDENYLYTCFAHTGEMAS--VKVIRNKQTSQSEGYGFIEFT 118

Query: 175 THVAAERILQTLNNTLMPS---------------------------------ADVTDCTL 230
           +  AAERILQT N T+MP+                                 ADVTD  L
Sbjct: 119 SRAAAERILQTFNGTIMPNGGQNFRLNWATFSAGERRHDDSPDYTIFVGDLAADVTDYHL 178
[Close]
BLAST of Spo08275.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSW8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_145010 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.600e-29
Identity = 89/189 (47.09%), Postives = 95/189 (50.26%), Query Frame = 1 

		  

Query: 116 PLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTT 175
           P +   V TLWIGDLQYWMD NYI N FA TGEL++  V I+RN QTMQSECY FLEFTT
Sbjct: 77  PATAEEVRTLWIGDLQYWMDENYIRNCFAPTGELSN--VKIIRNKQTMQSECYGFLEFTT 136

Query: 176 HVAAERILQTLNNTLMPSADV---------------------------------TDCTLQ 232
           H AAERILQTLNNTLMP+ +                                  TD TLQ
Sbjct: 137 HAAAERILQTLNNTLMPNVEQNYRLNWAFYGTGEKRGEDASDYTIFVGDLAADVTDYTLQ 196
[Close]
BLAST of Spo08275.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RN99_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047040 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.700e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

		  

Query: 134 MDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHVAAERILQTLNNTLMP 193
           MDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHVAAERILQTLNNTLMP
Sbjct: 1   MDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHVAAERILQTLNNTLMP 59
[Close]
BLAST of Spo08275.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E0W4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g200490 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.000e-24
Identity = 81/189 (42.86%), Postives = 91/189 (48.15%), Query Frame = 1 

		  

Query: 116 PLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTT 175
           P +   + TLWIGDLQYWMD NYI   FA +GEL +  V I+RN QTMQSECY F+EF+T
Sbjct: 75  PANADEIRTLWIGDLQYWMDENYIRTCFAQSGELVN--VKIIRNKQTMQSECYGFIEFST 134

Query: 176 HVAAERILQTLNNTLMPSA-------------------DVTDCTLQ-------------- 232
           H AAERILQT NNTLMP+                    D +D T+               
Sbjct: 135 HAAAERILQTYNNTLMPNVEQNYRLNWAFYGSGEKRGEDASDYTIFVGDLAPDVTDYTLQ 194
[Close]
BLAST of Spo08275.1 vs. UniProtKB/TrEMBL
Match: A0A0L9TTR8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g337300 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.900e-23
Identity = 69/149 (46.31%), Postives = 80/149 (53.69%), Query Frame = 1 

		  

Query: 115 RPLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFT 174
           +P S   V TLWIGDLQYWMD NYI   FAHTGE+A   V ++RN QT QSE Y F+EFT
Sbjct: 54  QPTSADEVRTLWIGDLQYWMDENYIYTCFAHTGEVAS--VKVIRNKQTSQSEGYGFIEFT 113

Query: 175 THVAAERILQTLNNTLMPS---------------------------------ADVTDCTL 230
           +   AERILQT N T+MP+                                 ADVTD  L
Sbjct: 114 SRAGAERILQTYNGTIMPNGGQNFRLNWASFSAGDRRHDDSPDHTIFVGDLAADVTDYLL 173
[Close]
BLAST of Spo08275.1 vs. UniProtKB/TrEMBL
Match: A0A0S3RA38_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G549900 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.900e-23
Identity = 69/149 (46.31%), Postives = 80/149 (53.69%), Query Frame = 1 

		  

Query: 115 RPLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFT 174
           +P S   V TLWIGDLQYWMD NYI   FAHTGE+A   V ++RN QT QSE Y F+EFT
Sbjct: 54  QPTSADEVRTLWIGDLQYWMDENYIYTCFAHTGEVAS--VKVIRNKQTSQSEGYGFIEFT 113

Query: 175 THVAAERILQTLNNTLMPS---------------------------------ADVTDCTL 230
           +   AERILQT N T+MP+                                 ADVTD  L
Sbjct: 114 SRAGAERILQTYNGTIMPNGGQNFRLNWASFSAGDRRHDDSPDHTIFVGDLAADVTDYLL 173
[Close]
BLAST of Spo08275.1 vs. ExPASy Swiss-Prot
Match: RB45B_ARATH (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana GN=RBP45B PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.100e-20
Identity = 59/149 (39.60%), Postives = 75/149 (50.34%), Query Frame = 1 

		  

Query: 115 RPLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFT 174
           +P +   + TLWIGDLQYWMD N++   FAHTGE+      ++RN QT Q E Y F+EF 
Sbjct: 54  QPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVS--AKVIRNKQTGQVEGYGFIEFA 113

Query: 175 THVAAERILQTLNNTLMP---------------------------------SADVTDCTL 230
           +H AAER+LQT NN  +P                                 +ADVTD  L
Sbjct: 114 SHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYIL 173
[Close]
BLAST of Spo08275.1 vs. ExPASy Swiss-Prot
Match: R47BP_ARATH (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.300e-19
Identity = 57/131 (43.51%), Postives = 67/131 (51.15%), Query Frame = 1 

		  

Query: 116 PLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTT 175
           P +   V TLWIGDLQYW+D NY+ + F+ TGEL    V ++RN  T Q E Y F+EF +
Sbjct: 17  PQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVS--VKVIRNKITGQPEGYGFIEFIS 76

Query: 176 HVAAERILQTLNNTLMPSA--------------------------------DVTDCTLQE 215
           H AAER LQT N T MP                                  DVTD  LQE
Sbjct: 77  HAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQE 136
[Close]
BLAST of Spo08275.1 vs. ExPASy Swiss-Prot
Match: RBP45_NICPL (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia GN=RBP45 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.100e-18
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 1 

		  

Query: 120 SSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHVAA 179
           + V +LWIGDLQYWMD NY+   F HTGEL      ++RN QT QSE Y FLEF +H AA
Sbjct: 81  NEVRSLWIGDLQYWMDENYLSTCFYHTGELVS--AKVIRNKQTGQSEGYGFLEFRSHAAA 140

Query: 180 ERILQTLNNTLMPSADVTDCTLQETFRVRYLSV 213
           E ILQT N TLMP+       +++ FR+ + S+
Sbjct: 141 ETILQTYNGTLMPN-------VEQNFRMNWASL 164
[Close]
BLAST of Spo08275.1 vs. ExPASy Swiss-Prot
Match: RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.400e-17
Identity = 53/140 (37.86%), Postives = 74/140 (52.86%), Query Frame = 1 

		  

Query: 124 TLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHVAAERIL 183
           T+WIGDLQ WMD +Y+ + F+  GE+    V I+RN QT QSE Y F+EF TH AAE++L
Sbjct: 85  TIWIGDLQQWMDESYLHSCFSQAGEVIS--VKIIRNKQTGQSERYGFVEFNTHAAAEKVL 144

Query: 184 QTLNNTLMPS---------------------------------ADVTDCTLQETFRVRYL 230
           Q+ N T+MP+                                 +DVTD  L++TF  RY 
Sbjct: 145 QSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYP 204
[Close]
BLAST of Spo08275.1 vs. ExPASy Swiss-Prot
Match: RB45A_ARATH (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana GN=RBP45A PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-15
Identity = 43/82 (52.44%), Postives = 52/82 (63.41%), Query Frame = 1 

		  

Query: 116 PLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTT 175
           P S S V +LWIGDLQ WMD NYI + FA +GE       ++RN  T QSE Y F+EF +
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATS--AKVIRNKLTGQSEGYGFIEFVS 112

Query: 176 HVAAERILQTLNNTLMPSADVT 198
           H  AER+LQT N   MPS + T
Sbjct: 113 HSVAERVLQTYNGAPMPSTEQT 132
[Close]
BLAST of Spo08275.1 vs. TAIR (Arabidopsis)
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 101.7 bits (252), Expect = 6.400e-22
Identity = 59/149 (39.60%), Postives = 75/149 (50.34%), Query Frame = 1 

		  

Query: 115 RPLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFT 174
           +P +   + TLWIGDLQYWMD N++   FAHTGE+      ++RN QT Q E Y F+EF 
Sbjct: 54  QPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVS--AKVIRNKQTGQVEGYGFIEFA 113

Query: 175 THVAAERILQTLNNTLMP---------------------------------SADVTDCTL 230
           +H AAER+LQT NN  +P                                 +ADVTD  L
Sbjct: 114 SHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYIL 173
[Close]
BLAST of Spo08275.1 vs. TAIR (Arabidopsis)
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 98.2 bits (243), Expect = 7.100e-21
Identity = 57/131 (43.51%), Postives = 67/131 (51.15%), Query Frame = 1 

		  

Query: 116 PLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTT 175
           P +   V TLWIGDLQYW+D NY+ + F+ TGEL    V ++RN  T Q E Y F+EF +
Sbjct: 17  PQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVS--VKVIRNKITGQPEGYGFIEFIS 76

Query: 176 HVAAERILQTLNNTLMPSA--------------------------------DVTDCTLQE 215
           H AAER LQT N T MP                                  DVTD  LQE
Sbjct: 77  HAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQE 136
[Close]
BLAST of Spo08275.1 vs. TAIR (Arabidopsis)
Match: AT5G54900.1 (RNA-binding protein 45A)

HSP 1 Score: 84.7 bits (208), Expect = 8.100e-17
Identity = 43/82 (52.44%), Postives = 52/82 (63.41%), Query Frame = 1 

		  

Query: 116 PLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTT 175
           P S S V +LWIGDLQ WMD NYI + FA +GE       ++RN  T QSE Y F+EF +
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATS--AKVIRNKLTGQSEGYGFIEFVS 112

Query: 176 HVAAERILQTLNNTLMPSADVT 198
           H  AER+LQT N   MPS + T
Sbjct: 113 HSVAERVLQTYNGAPMPSTEQT 132
[Close]
BLAST of Spo08275.1 vs. TAIR (Arabidopsis)
Match: AT3G19130.1 (RNA-binding protein 47B)

HSP 1 Score: 79.3 bits (194), Expect = 3.400e-15
Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 1 

		  

Query: 118 SFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTTHV 177
           S   V TLW+GDL +WMD  Y+ + F+HTGE++   V ++RN  T QSE Y F+EF +  
Sbjct: 103 SGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSS--VKVIRNKLTSQSEGYGFVEFLSRA 162

Query: 178 AAERILQTLNNTLMPSADVTDCTLQETFRVRYLS 212
           AAE +LQ  + ++MP++D       + FR+ + S
Sbjct: 163 AAEEVLQNYSGSVMPNSD-------QPFRINWAS 187
[Close]
BLAST of Spo08275.1 vs. TAIR (Arabidopsis)
Match: AT4G27000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.700e-14
Identity = 39/80 (48.75%), Postives = 47/80 (58.75%), Query Frame = 1 

		  

Query: 116 PLSFSSVHTLWIGDLQYWMDGNYICNYFAHTGELADFHVNIVRNIQTMQSECYKFLEFTT 175
           P S   + +LWIGDLQ WMD NY+ N F  TGE       ++RN Q   SE Y F+EF  
Sbjct: 73  PGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEAT--AAKVIRNKQNGYSEGYGFIEFVN 132

Query: 176 HVAAERILQTLNNTLMPSAD 196
           H  AER LQT N   MPS++
Sbjct: 133 HATAERNLQTYNGAPMPSSE 150
The following BLAST results are available for this feature:
BLAST of Spo08275.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902184772|gb|KNA10364.1|6.6e-2947.0hypothetical protein SOVF_1450... [more]
gi|902228160|gb|KNA21001.1|5.2e-26100.hypothetical protein SOVF_0470... [more]
gi|731369905|ref|XP_010665562.1|2.9e-2442.8PREDICTED: polyadenylate-bindi... [more]
gi|1012004966|ref|XP_015941275.1|5.4e-2346.3PREDICTED: polyadenylate-bindi... [more]
gi|1021472393|ref|XP_016196180.1|5.4e-2346.3PREDICTED: polyadenylate-bindi... [more]
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BLAST of Spo08275.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSW8_SPIOL4.6e-2947.0Uncharacterized protein OS=Spi... [more]
A0A0K9RN99_SPIOL3.7e-26100.Uncharacterized protein OS=Spi... [more]
A0A0J8E0W4_BETVU2.0e-2442.8Uncharacterized protein OS=Bet... [more]
A0A0L9TTR8_PHAAN4.9e-2346.3Uncharacterized protein OS=Pha... [more]
A0A0S3RA38_PHAAN4.9e-2346.3Uncharacterized protein OS=Vig... [more]
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BLAST of Spo08275.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RB45B_ARATH1.1e-2039.6Polyadenylate-binding protein ... [more]
R47BP_ARATH1.3e-1943.5Polyadenylate-binding protein ... [more]
RBP45_NICPL1.1e-1851.6Polyadenylate-binding protein ... [more]
RBP47_NICPL3.4e-1737.8Polyadenylate-binding protein ... [more]
RB45A_ARATH1.4e-1552.4Polyadenylate-binding protein ... [more]
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BLAST of Spo08275.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G11650.26.4e-2239.6RNA-binding (RRM/RBD/RNP motif... [more]
AT5G19350.17.1e-2143.5RNA-binding (RRM/RBD/RNP motif... [more]
AT5G54900.18.1e-1752.4RNA-binding protein 45A[more]
AT3G19130.13.4e-1541.4RNA-binding protein 47B[more]
AT4G27000.11.7e-1448.7RNA-binding (RRM/RBD/RNP motif... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 125..192
score: 6.
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 123..224
score: 8
IPR012677Nucleotide-binding alpha-beta plait domainGENE3D3.30.70.330coord: 123..191
score: 3.
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 108..191
score: 6.11

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009651 response to salt stress
biological_process GO:0033358 UDP-L-arabinose biosynthetic process
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0048366 leaf development
biological_process GO:0009729 detection of brassinosteroid stimulus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009932 cell tip growth
biological_process GO:0009742 brassinosteroid mediated signaling pathway
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0048657 anther wall tapetum cell differentiation
biological_process GO:0006012 galactose metabolic process
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0071555 cell wall organization
biological_process GO:0045227 capsule polysaccharide biosynthetic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006260 DNA replication
biological_process GO:0044265 cellular macromolecule catabolic process
biological_process GO:0008612 peptidyl-lysine modification to peptidyl-hypusine
biological_process GO:0050983 obsolete deoxyhypusine biosynthetic process from spermidine
biological_process GO:0009553 embryo sac development
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0060548 negative regulation of cell death
biological_process GO:0010584 pollen exine formation
biological_process GO:0019048 modulation by virus of host morphology or physiology
biological_process GO:0006474 N-terminal protein amino acid acetylation
biological_process GO:0009269 response to desiccation
biological_process GO:0009409 response to cold
biological_process GO:0009737 response to abscisic acid
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
biological_process GO:0009987 cellular process
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0048767 root hair elongation
biological_process GO:0002237 response to molecule of bacterial origin
biological_process GO:1900140 regulation of seedling development
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0034655 nucleobase-containing compound catabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0061025 membrane fusion
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006812 cation transport
biological_process GO:0006816 calcium ion transport
biological_process GO:0010224 response to UV-B
biological_process GO:0010046 response to mycotoxin
biological_process GO:2000030 regulation of response to red or far red light
biological_process GO:0055085 transmembrane transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway
biological_process GO:0006486 protein glycosylation
biological_process GO:0009630 gravitropism
biological_process GO:0006857 oligopeptide transport
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0006281 DNA repair
biological_process GO:0046520 sphingoid biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0031248 protein acetyltransferase complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010008 endosome membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0031981 nuclear lumen
cellular_component GO:0005634 nucleus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005773 vacuole
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0032991 protein-containing complex
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity
molecular_function GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
molecular_function GO:0019003 GDP binding
molecular_function GO:0008324 cation transmembrane transporter activity
molecular_function GO:0005496 steroid binding
molecular_function GO:0004581 dolichyl-phosphate beta-glucosyltransferase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0034038 deoxyhypusine synthase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0015079 potassium ion transmembrane transporter activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0050373 UDP-arabinose 4-epimerase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003978 UDP-glucose 4-epimerase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0035673 oligopeptide transmembrane transporter activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0019899 enzyme binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo172200.77Barchart | Table
Spo076850.77Barchart | Table
Spo142400.75Barchart | Table
Spo018410.74Barchart | Table
Spo125430.73Barchart | Table
Spo161860.73Barchart | Table
Spo269900.73Barchart | Table
Spo173860.73Barchart | Table
Spo251070.72Barchart | Table
Spo007160.72Barchart | Table
Spo158420.72Barchart | Table
Spo247360.72Barchart | Table
Spo124230.71Barchart | Table
Spo103290.71Barchart | Table
Spo273520.71Barchart | Table
Spo216000.71Barchart | Table
Spo018400.71Barchart | Table
Spo149090.71Barchart | Table
Spo038650.71Barchart | Table
Spo199360.71Barchart | Table
Spo052690.71Barchart | Table
Spo060220.71Barchart | Table
Spo059280.71Barchart | Table
Spo149420.71Barchart | Table
Spo109660.71Barchart | Table
Spo092140.71Barchart | Table
Spo108950.70Barchart | Table
Spo087250.70Barchart | Table
Spo104270.70Barchart | Table
Spo011960.70Barchart | Table
Spo239350.70Barchart | Table
Spo238560.70Barchart | Table
Spo228180.70Barchart | Table
Spo027490.70Barchart | Table
Spo147120.70Barchart | Table
Spo049850.70Barchart | Table
Spo129540.70Barchart | Table
Spo121550.70Barchart | Table
Spo109650.70Barchart | Table
Spo084350.70Barchart | Table
Spo268340.69Barchart | Table
Spo170320.69Barchart | Table
Spo177260.69Barchart | Table
Spo106610.69Barchart | Table
Spo192450.69Barchart | Table
Spo273320.69Barchart | Table
Spo209120.69Barchart | Table
Spo112850.69Barchart | Table
Spo068110.69Barchart | Table
Spo069620.69Barchart | Table
Spo130450.69Barchart | Table
Spo040820.69Barchart | Table
Spo001460.69Barchart | Table
Spo005260.69Barchart | Table
Spo054050.68Barchart | Table
Spo002830.68Barchart | Table
Spo016290.68Barchart | Table
Spo031490.68Barchart | Table
Spo054440.68Barchart | Table
Spo065060.68Barchart | Table
Spo088500.68Barchart | Table
Spo096840.68Barchart | Table
Spo109330.68Barchart | Table
Spo127190.68Barchart | Table
Spo142120.68Barchart | Table
Spo201870.68Barchart | Table
Spo224360.68Barchart | Table
Spo237450.68Barchart | Table
Spo244940.68Barchart | Table
Spo259170.68Barchart | Table
Spo166800.67Barchart | Table
Spo239300.67Barchart | Table
Spo236080.67Barchart | Table
Spo173440.67Barchart | Table
Spo228940.67Barchart | Table
Spo050930.67Barchart | Table
Spo127180.67Barchart | Table
Spo015900.67Barchart | Table
Spo031960.67Barchart | Table
Spo114820.67Barchart | Table
Spo022800.67Barchart | Table
Spo115340.67Barchart | Table
Spo198950.67Barchart | Table
Spo024440.67Barchart | Table
Spo056270.67Barchart | Table
Spo245980.67Barchart | Table
Spo205790.67Barchart | Table
Spo265660.67Barchart | Table
Spo130870.67Barchart | Table
Spo004860.67Barchart | Table
Spo041040.67Barchart | Table
Spo159950.67Barchart | Table
Spo160760.67Barchart | Table
Spo013440.67Barchart | Table
Spo070790.67Barchart | Table
Spo007080.67Barchart | Table
Spo001730.66Barchart | Table
Spo267060.66Barchart | Table
Spo054500.66Barchart | Table
Spo140840.66Barchart | Table
Spo144240.66Barchart | Table
Spo048850.66Barchart | Table
Spo148720.66Barchart | Table
Spo043160.66Barchart | Table
Spo149530.66Barchart | Table
Spo162400.66Barchart | Table
Spo165840.66Barchart | Table
Spo173910.66Barchart | Table
Spo175490.66Barchart | Table
Spo179590.66Barchart | Table
Spo031630.66Barchart | Table
Spo200450.66Barchart | Table
Spo006530.66Barchart | Table
Spo214220.66Barchart | Table
Spo214310.66Barchart | Table
Spo234010.66Barchart | Table
Spo234020.66Barchart | Table
Spo235800.66Barchart | Table
Spo272240.66Barchart | Table
Spo240180.66Barchart | Table
Spo243310.66Barchart | Table
Spo243350.66Barchart | Table
Spo011800.66Barchart | Table
Spo255730.66Barchart | Table
Spo264810.66Barchart | Table
Spo085210.66Barchart | Table
Spo081470.66Barchart | Table
Spo065800.66Barchart | Table
Spo014880.65Barchart | Table
Spo034160.65Barchart | Table
Spo039500.65Barchart | Table
Spo265600.65Barchart | Table
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