Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCATCATTTGGAGAATACTCCATTATCATTGTATTCTCTCACCTTACCTTTAAAAATACGTTTTGTATCTCTTAATATATCTGGTGGTAATACAATTAATTTCTAGTCTATTTTATGTTTTTTAATTGATTTATATATAGTGTTGTTGTGGCCACCGACAAGTAAATTGAAAAGGGAAGTAAGAAATGAAGAAGATGAAAGTGGAAAAGTTATACAGGCTTATGATCGTATTCTTTGCATTCCAAGTTATTTGTTTCATCTTCTTCATTAGGACTTCTACTCGTCATCAAGGTATGTATATATTCGTACTAATTAATGCTCGTTTCATTTGAATTGATTATATTGTCACGTTGATAGTGTAATTTGAAATACTATTAGTTTAGCAACTCATTTGAGACAAAGGTAGTAATGACCTTTTATGTATTGAAAGGTCGATTCTATTAACTTCTAGTAATTGGTTTCAGTTTGTTATTTTCAAATATGGCAATTGGCAAACATGCAAATCTCCCGGAGTATATTCAAGTTTTGATGGGAAACTACTTTTATTTCATCATGTGATTCCTGTCCATCTCCCCTGTTTTTTTTTTTTTTTTTTTTTGGGTGGGAGTGGTTATTCAAATAAAACGAATTGGGCCATTTGTATGATATTGTTTACTTACTTTAGACATGAAAATTATTTTGGGGATGTGAATAAACTTGAGGTGAAGCAAGCCATTGTGTGAGTGTGTCACTGCAAGTACCACAAATATTGCAATACAAGTACTTCATACTCTGGATAATTTTCGCATATTTTAGGTCTTAAGAATGAGGTTGTTTTTTCGCATATCTGATATGTGTGGAAACACACATATCAACTAAAAGACAAATAGCTAAAAGACAAAAAAGAAAGTAACATTCATGTTAAAATAAGTACTCCCTCCGTCCCATAATATAGTGCCCGTTTGACCAAAATCACGGTTATTAAGGTAAAGTATAACATTGATAATAAAAACAATAATTATTTGTTCTTTCAAGATAAAGTACATGTTAGTTGGCTTTTATGGAGAGAGAAATTAGAGATTAAAGGTGTGTACATAATAAATAGGCCTAAAAAAGACAAAAATCAAGCACATGGGTTGAATAAAAGTCAAAAAATACAATTTTCAAAGTAAAAATTAATGGTTTAAAATAGAAATATGCACATCATTTAGGGACACCATTTTAGGAAAACAGGCACTATATTATGGGACGGAGGGAGTACCATTCTGTAAAAAAAAATTACCATTTTTGTTTAAAAAAGTACTATTTAATTTCTTTTTCGTCCTTTTTCCTATTTTGTCTTTTGTTCTGATATGTATTTGCTCATACATATCTGATATGCGCTTGTACTTCCCTTCTTAAGAACATAGAAACTTAGTTACATTCGTTCCAATTTAGCTAGAAAATAGTTATATGGAACGTGTTATTGATTATCTACCAAAAAGAGCATTCATTATTCATAGAGCTGAAGATCATATAACACTAGTAGCCTTTGATAGTTCCTATTTTCAAATTTAAAATAACCATCAGCAAAAAAAAAATCCATGCACCCAAAATGAGGTCATTACACTAGGATCAAGATATAAAGCAGGATAAACCAATTAATTTTACATAACAAAGCATAAAGGACTAAGACATACAAGAGCCTCATCAATGAACCAAAAGTTTATGTATGCCATTAGGCATTAGCAATAGACTAATTCTATTTGTACATTTAAATTTGTTTTTAAATCAAATGTTGTTTCCTCGCAATTACACTTTGTTTGAATAAACAAAAATAGAGAGAAAGGGGAGGAAGGGAAAGGGAGGGAAACAAGCTCCCTTGTTTTGATAAAAAGGCGAGTGAGAGAGGGAGAGATCCATAGCCAATAGCTCTGCTTCGTTTCCGTTCTATGTTACTATCCAAACACACTATTAGTGATTTTAGTTTTTGTTAATGAAGAACGGTGTCCTTAAATTCATTGCGCTCTTTAAAGACTTAACCCTTCTCTGTTCATTTTCAGAGCACGAAACAGATAAACCAACAAAGGTAATGGGGAGTTCATCATCAGCATTGGGTAGACGACTATCCATCCAAGATGGTGTTAGTAAGCAAAGTTTAAAGATGTCATCAACGACTATCCGACATTTATCCAGCAATCCAATCCTTATTGAACCCACAATTATTTGTGATCGATCCCATCCACTTTATGATTGGTGTAATCTTAAAAGTGGTAGCATTTTAGAACCCAACACCGCTACATTCTTTAGTAGATCATCGATTCATCCCCTGAAAGTGGAAACAATCCGGCCTTACCCTCGCAAAAGGGATAATAACACCATGTCTAATATACGTGAAATCACCCTAACCACAGAGTTATCCCACTCTCCATGTACAATTGTTCACGAAACCCCAGCTTTAGTATTCAGCATTGGTGGCTTCACAGGCAACTTGTTCCATGATTTTAATGATGGTTTTGTTCCACTATTTATCACTATTAACACCCTCTTTCCTGATCAAGATGTTACCCTTGTCATAACCAACTACAGCGAATGGTGGTATGGTAAATATGAGGCTATACTTCCTCAGTTCTCCAACCAAACTGTTATCAACCTTGACAACCAGACAGTCTCACATTGTTTCCCATCTGTTGTAGCCGGCCTCATATCTCATGGACCAATGACTATTAACCCTACTCTAATCCCACATCGAAAGAGTTTCCTTGACTTTCGTGCTTTGCTTGAGGAAGGATACCAGAAGTGTCTTGTATGGCCTCCACCCAAGATCAAAGGTAGACCGAGGCTTGTGTTAGTAAGCCGAGTAGGGGCTGTTGGACGCGTCATACTAAACCAAGACAATGTTATAAAGTTAGCTCAAGAAGAAGGATTTGATGTGGTGGTATTTGAACCATCAGCTTACACATATCTATGTGATGTTTATCGGTTAATGAATGGTAGTCATGCAATCATGGGAGTTCACGGAGCTGCCCTTACACACTCCCTTTTCCTTCAACCTGGTGCAGCATTCATCCAAGTAGTGCCAATTGGAGGTGATTGGTTAGCAAGGACTTACTTCCGGAATTTAGCTAAGGGGATGAAATTGGAGTACATTCAGTACAAGATTCAGCCAGAGGAGAGTACTTTGGTTGACAAATATGGTAAAGATCATGTTTTAATACGTGACCCCGATTCCATAACAGCTACAAATTGGTCTGCATTGCATAATATTTACTTGAGAGGCCAAGATGTTAGGTTGGACATGGCAAGATTCAAGACATGTTTGAAGAATGCTTATGTTAAGGCCAAGAAATTAATGGAGCATCAAGGTTTACATGTCCGTCGTCGCTCTAAAATTAAGAAATTCATCAGGCCACCGGTCTTCACTTATACTTATGGTGTTATGTAGGATAACTTTGGTTACATGTATATGTCAAATTATACAGATTTTTTGTACTGCAGATACTAAATCATCTTATTCTCGTCTCAATGTCTCATTTTCGTCGAGATACTTATATTTGGAAGTTGTAACTCTAACTAGTTAATGGCCCAAGTGATGCCATAGATAGTAGAAAAATAG TTTCATCATTTGGAGAATACTCCATTATCATTGTATTCTCTCACCTTACCTTTAAAAATACGTTTTGTATCTCTTAATATATCTGGTGGTAATACAATTAATTTCTAGTCTATTTTATGTTTTTTAATTGATTTATATATAGTGTTGTTGTGGCCACCGACAAGTAAATTGAAAAGGGAAGTAAGAAATGAAGAAGATGAAAGTGGAAAAGTTATACAGGCTTATGATCGTATTCTTTGCATTCCAAGTTATTTGTTTCATCTTCTTCATTAGGACTTCTACTCGTCATCAAGAGCACGAAACAGATAAACCAACAAAGGTAATGGGGAGTTCATCATCAGCATTGGGTAGACGACTATCCATCCAAGATGGTGTTAGTAAGCAAAGTTTAAAGATGTCATCAACGACTATCCGACATTTATCCAGCAATCCAATCCTTATTGAACCCACAATTATTTGTGATCGATCCCATCCACTTTATGATTGGTGTAATCTTAAAAGTGGTAGCATTTTAGAACCCAACACCGCTACATTCTTTAGTAGATCATCGATTCATCCCCTGAAAGTGGAAACAATCCGGCCTTACCCTCGCAAAAGGGATAATAACACCATGTCTAATATACGTGAAATCACCCTAACCACAGAGTTATCCCACTCTCCATGTACAATTGTTCACGAAACCCCAGCTTTAGTATTCAGCATTGGTGGCTTCACAGGCAACTTGTTCCATGATTTTAATGATGGTTTTGTTCCACTATTTATCACTATTAACACCCTCTTTCCTGATCAAGATGTTACCCTTGTCATAACCAACTACAGCGAATGGTGGTATGGTAAATATGAGGCTATACTTCCTCAGTTCTCCAACCAAACTGTTATCAACCTTGACAACCAGACAGTCTCACATTGTTTCCCATCTGTTGTAGCCGGCCTCATATCTCATGGACCAATGACTATTAACCCTACTCTAATCCCACATCGAAAGAGTTTCCTTGACTTTCGTGCTTTGCTTGAGGAAGGATACCAGAAGTGTCTTGTATGGCCTCCACCCAAGATCAAAGGTAGACCGAGGCTTGTGTTAGTAAGCCGAGTAGGGGCTGTTGGACGCGTCATACTAAACCAAGACAATGTTATAAAGTTAGCTCAAGAAGAAGGATTTGATGTGGTGGTATTTGAACCATCAGCTTACACATATCTATGTGATGTTTATCGGTTAATGAATGGTAGTCATGCAATCATGGGAGTTCACGGAGCTGCCCTTACACACTCCCTTTTCCTTCAACCTGGTGCAGCATTCATCCAAGTAGTGCCAATTGGAGGTGATTGGTTAGCAAGGACTTACTTCCGGAATTTAGCTAAGGGGATGAAATTGGAGTACATTCAGTACAAGATTCAGCCAGAGGAGAGTACTTTGGTTGACAAATATGGTAAAGATCATGTTTTAATACGTGACCCCGATTCCATAACAGCTACAAATTGGTCTGCATTGCATAATATTTACTTGAGAGGCCAAGATGTTAGGTTGGACATGGCAAGATTCAAGACATGTTTGAAGAATGCTTATGTTAAGGCCAAGAAATTAATGGAGCATCAAGGTTTACATGTCCGTCGTCGCTCTAAAATTAAGAAATTCATCAGGCCACCGGTCTTCACTTATACTTATGGTGTTATGTAGGATAACTTTGGTTACATGTATATGTCAAATTATACAGATTTTTTGTACTGCAGATACTAAATCATCTTATTCTCGTCTCAATGTCTCATTTTCGTCGAGATACTTATATTTGGAAGTTGTAACTCTAACTAGTTAATGGCCCAAGTGATGCCATAGATAGTAGAAAAATAG ATGAAGAAGATGAAAGTGGAAAAGTTATACAGGCTTATGATCGTATTCTTTGCATTCCAAGTTATTTGTTTCATCTTCTTCATTAGGACTTCTACTCGTCATCAAGAGCACGAAACAGATAAACCAACAAAGGTAATGGGGAGTTCATCATCAGCATTGGGTAGACGACTATCCATCCAAGATGGTGTTAGTAAGCAAAGTTTAAAGATGTCATCAACGACTATCCGACATTTATCCAGCAATCCAATCCTTATTGAACCCACAATTATTTGTGATCGATCCCATCCACTTTATGATTGGTGTAATCTTAAAAGTGGTAGCATTTTAGAACCCAACACCGCTACATTCTTTAGTAGATCATCGATTCATCCCCTGAAAGTGGAAACAATCCGGCCTTACCCTCGCAAAAGGGATAATAACACCATGTCTAATATACGTGAAATCACCCTAACCACAGAGTTATCCCACTCTCCATGTACAATTGTTCACGAAACCCCAGCTTTAGTATTCAGCATTGGTGGCTTCACAGGCAACTTGTTCCATGATTTTAATGATGGTTTTGTTCCACTATTTATCACTATTAACACCCTCTTTCCTGATCAAGATGTTACCCTTGTCATAACCAACTACAGCGAATGGTGGTATGGTAAATATGAGGCTATACTTCCTCAGTTCTCCAACCAAACTGTTATCAACCTTGACAACCAGACAGTCTCACATTGTTTCCCATCTGTTGTAGCCGGCCTCATATCTCATGGACCAATGACTATTAACCCTACTCTAATCCCACATCGAAAGAGTTTCCTTGACTTTCGTGCTTTGCTTGAGGAAGGATACCAGAAGTGTCTTGTATGGCCTCCACCCAAGATCAAAGGTAGACCGAGGCTTGTGTTAGTAAGCCGAGTAGGGGCTGTTGGACGCGTCATACTAAACCAAGACAATGTTATAAAGTTAGCTCAAGAAGAAGGATTTGATGTGGTGGTATTTGAACCATCAGCTTACACATATCTATGTGATGTTTATCGGTTAATGAATGGTAGTCATGCAATCATGGGAGTTCACGGAGCTGCCCTTACACACTCCCTTTTCCTTCAACCTGGTGCAGCATTCATCCAAGTAGTGCCAATTGGAGGTGATTGGTTAGCAAGGACTTACTTCCGGAATTTAGCTAAGGGGATGAAATTGGAGTACATTCAGTACAAGATTCAGCCAGAGGAGAGTACTTTGGTTGACAAATATGGTAAAGATCATGTTTTAATACGTGACCCCGATTCCATAACAGCTACAAATTGGTCTGCATTGCATAATATTTACTTGAGAGGCCAAGATGTTAGGTTGGACATGGCAAGATTCAAGACATGTTTGAAGAATGCTTATGTTAAGGCCAAGAAATTAATGGAGCATCAAGGTTTACATGTCCGTCGTCGCTCTAAAATTAAGAAATTCATCAGGCCACCGGTCTTCACTTATACTTATGGTGTTATGTAG MKKMKVEKLYRLMIVFFAFQVICFIFFIRTSTRHQEHETDKPTKVMGSSSSALGRRLSIQDGVSKQSLKMSSTTIRHLSSNPILIEPTIICDRSHPLYDWCNLKSGSILEPNTATFFSRSSIHPLKVETIRPYPRKRDNNTMSNIREITLTTELSHSPCTIVHETPALVFSIGGFTGNLFHDFNDGFVPLFITINTLFPDQDVTLVITNYSEWWYGKYEAILPQFSNQTVINLDNQTVSHCFPSVVAGLISHGPMTINPTLIPHRKSFLDFRALLEEGYQKCLVWPPPKIKGRPRLVLVSRVGAVGRVILNQDNVIKLAQEEGFDVVVFEPSAYTYLCDVYRLMNGSHAIMGVHGAALTHSLFLQPGAAFIQVVPIGGDWLARTYFRNLAKGMKLEYIQYKIQPEESTLVDKYGKDHVLIRDPDSITATNWSALHNIYLRGQDVRLDMARFKTCLKNAYVKAKKLMEHQGLHVRRRSKIKKFIRPPVFTYTYGVM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08299.1 vs. NCBI nr
Match: gi|902197158|gb|KNA13346.1| (hypothetical protein SOVF_117850 [Spinacia oleracea]) HSP 1 Score: 914.8 bits (2363), Expect = 6.300e-263 Identity = 447/450 (99.33%), Postives = 447/450 (99.33%), Query Frame = 1
BLAST of Spo08299.1 vs. NCBI nr
Match: gi|731343804|ref|XP_010683075.1| (PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 790.0 bits (2039), Expect = 2.300e-225 Identity = 388/498 (77.91%), Postives = 437/498 (87.75%), Query Frame = 1
BLAST of Spo08299.1 vs. NCBI nr
Match: gi|870855240|gb|KMT06973.1| (hypothetical protein BVRB_6g153070 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 679.5 bits (1752), Expect = 4.500e-192 Identity = 317/368 (86.14%), Postives = 348/368 (94.57%), Query Frame = 1
BLAST of Spo08299.1 vs. NCBI nr
Match: gi|764575020|ref|XP_011463038.1| (PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like isoform X2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 415.2 bits (1066), Expect = 1.600e-112 Identity = 205/414 (49.52%), Postives = 280/414 (67.63%), Query Frame = 1
BLAST of Spo08299.1 vs. NCBI nr
Match: gi|731344374|ref|XP_010683379.1| (PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase-like, partial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 414.5 bits (1064), Expect = 2.700e-112 Identity = 187/315 (59.37%), Postives = 243/315 (77.14%), Query Frame = 1
BLAST of Spo08299.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1E2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117850 PE=4 SV=1) HSP 1 Score: 914.8 bits (2363), Expect = 4.400e-263 Identity = 447/450 (99.33%), Postives = 447/450 (99.33%), Query Frame = 1
BLAST of Spo08299.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4L4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g153070 PE=4 SV=1) HSP 1 Score: 679.5 bits (1752), Expect = 3.100e-192 Identity = 317/368 (86.14%), Postives = 348/368 (94.57%), Query Frame = 1
BLAST of Spo08299.1 vs. UniProtKB/TrEMBL
Match: A0A067KYQ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15669 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 8.700e-110 Identity = 198/390 (50.77%), Postives = 271/390 (69.49%), Query Frame = 1
BLAST of Spo08299.1 vs. UniProtKB/TrEMBL
Match: W9RCN7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004241 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 3.600e-108 Identity = 220/476 (46.22%), Postives = 291/476 (61.13%), Query Frame = 1
BLAST of Spo08299.1 vs. UniProtKB/TrEMBL
Match: A0A067GWJ7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g043548mg PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 9.000e-107 Identity = 192/381 (50.39%), Postives = 261/381 (68.50%), Query Frame = 1
BLAST of Spo08299.1 vs. TAIR (Arabidopsis)
Match: AT2G03360.2 (Glycosyltransferase family 61 protein) HSP 1 Score: 364.8 bits (935), Expect = 8.600e-101 Identity = 186/408 (45.59%), Postives = 266/408 (65.20%), Query Frame = 1
BLAST of Spo08299.1 vs. TAIR (Arabidopsis)
Match: AT2G03370.1 (Glycosyltransferase family 61 protein) HSP 1 Score: 359.8 bits (922), Expect = 2.800e-99 Identity = 178/389 (45.76%), Postives = 256/389 (65.81%), Query Frame = 1
BLAST of Spo08299.1 vs. TAIR (Arabidopsis)
Match: AT2G41640.1 (Glycosyltransferase family 61 protein) HSP 1 Score: 296.6 bits (758), Expect = 2.900e-80 Identity = 150/390 (38.46%), Postives = 235/390 (60.26%), Query Frame = 1
BLAST of Spo08299.1 vs. TAIR (Arabidopsis)
Match: AT3G10320.1 (Glycosyltransferase family 61 protein) HSP 1 Score: 284.3 bits (726), Expect = 1.500e-76 Identity = 160/429 (37.30%), Postives = 245/429 (57.11%), Query Frame = 1
BLAST of Spo08299.1 vs. TAIR (Arabidopsis)
Match: AT3G57380.1 (Glycosyltransferase family 61 protein) HSP 1 Score: 274.6 bits (701), Expect = 1.200e-73 Identity = 151/402 (37.56%), Postives = 226/402 (56.22%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08299.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08299.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08299.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo08299.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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