Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATGGACTCGGGGGCTGACTCAGTGAGTTCAACACCTCGTTCAGTCCACCACAAACACCCACTCTCCGACGACAAACCACTGGTCCGTCTCATGGTTAGCTTTGGCGGTAAAATACTCCCACGTCCTCACGACAATCAACTCCGTTACGTCGGTGGCGATACCCGTATTGTCGCCGTCAACCGGTCTACTAGTTTCTCTCTCCTACTTTCTAAACTCTCGAAGCTTCTATTAACCCCTCAAAACTCATCCTCCACCGCCGCTGCTGCTTCTGTTGATTTTACTGTCAAATACCAGCTTCCCAACGAAGAACTAGACGCTCTTATTACGGTTTCCACCGACGAAGATGTCGAGAATATGATGGAGGAGTTCGATCGTCTATCTCTCTCCTCCACCGATAAGATCCCACGGTTGAGGCTTTTCCTGTTTCCGGATACTAATGGTGGTGGTGGCAGTGGACAAGTTTCTAGAAGTTCGAGTATCGCGTCGCTTCTAGATGGTTCTAGGAAAAGGGAGAATTGGTTTGTCGACGCTTTGAACGGCGGTTCTACTGGTGGGTTAGAGAGGGGTAGGTCGGAAGCGTCATCGATTGTTTCGGAAGTTCCGGATTATTTATTCGGGTTGGATAATTCCGATGAACCCCCACCTCCACCTGTGAAATTCAGGAATCGGTCCGGATTGAGTGAACCGGGTCCAGGTTCAGCACCCGGTTCACCTGCTTTTGGTTCAGCGTCATCCGCTCCATCCATGCCGAACCTTCCACCGGTGAAGACAAAACCCGAGAAGACAAATATGCATTCGGTTGATGATGGGATTGACCCGATGGGGCAGCAGATGGGTGGCCCGCTTTGGAGTCATAACATTAACACTAACCCGGGTTCTCCTTATCCAGCTCATACGGTGCAGCCGATGCCAGTCTATTATGTTCCTGCTGGCGGGTCCGGGCCGGGTTTGGTGCCTCACAGGAATGTAGTTCCGGTATCAGTACCTGTTCCCAACCCATACATGCCACAATACGGTCCGGGTCCCGTTCAGGTTCCAGTTGGGTATCCAGGTCCGGGTCGAGGTCCAATGTATGAAGTCCAAATGCAAGGGAATATGGTTCAGGGTCAAGGTTTAAGTGGGATGAATAATCAGCCATTATATTATGGGGTTAAAAATGGTGGAATGGTTGCTACTTATCCGGGTCCGGGTGCTGGTATGCCTATGTCAGGAGACGAAGATGGGTCAAGGGGTCGGAATTTTCAAGGATAAAATACTCCCTCAGTCTGGAAATAGTTATAAACTTATAATTAAGCACGACAATATACTTGCAACTTTCAATTAATGCGACAATTAAATCCGAATGAACTAGCTTATTATTCCGTATTAAAGATTCCCTATAGTATAATGAGTGTTTAGTAAAAGTGTGCAGCATCTTGATTTTAATTTTCTTACTTTTTGTTTTGCAAGTTGTTTGGGGAAGGAGGAATATGTAAATAAAAATGAAATTTGGTAAAGGTTTCCAATTGTAGAGAATACAGATATCTGGAGTTGATGCTTTGATATCTTTTGTTTGTGATTTTTGGCAAATAAAGTGGAAAAGCTGGAAAAAAGATTTGGCTATTATTAAAGGTGTCCATTTAAATTAGTGTCATTTACATGGCATTGGTGCATTGCCATTACGTGAGGGACCTAATTCTGGAGACTGGACTCTGGAGGGCCAGATTCGGTAATTGAAGGGGAAAAAAAAGTGTGACCAAATATATTTCACTTGAGAATAAATGTATGGTTGTATGAACATCTATGGTAATGAAACAATCATTTAGGGACATACTAATAAAAAGAAATAGAGAGAGTATTAAATAAGCATGCGTGTTCAACTTTATGCACATCTCAGAAATGGCGAGTGGATTGAGTCTGATCCACCCCATCCTGAAACAACCCATAGTGACCTGGTCACGTGGATCTGACTCATTAATGACCCTTGACAAAATCCACCCAACTCAAATATTTCTTTTGATGTGTAGTGGATCGCGTTTTTCCGACACGACTCATTTCGGCCCACCCCATTGGACCAGAGACAATCCAACACGGCACACCCGACCCACCCAACCCAACCCACGGAATACAACCCACCTAATTCACCCTATGTCCCACCACACTTGTCATCCTAATTTAAACTACTTTGTATATTTAAGATGCTTAATTTTAAGTTTATTGTCTAAGTATACGTTAACTACATTATGTGAGTATGTCAATAACATAAAAATTAATTAATTTAAGCATATACGGAGATAACATTTGTAATCTTTTACGTTTAAATAATAGTCCAAAGCCACTTGACCCACATCAGCTCCTAAAATTCGTCTAAACCCACCAACCACTACAAGAATTCGGGTTTTTACCGACTGAAATTGCCGACTACACTATAAAAGTAGTCGTAAATTTTTTATTTACCGACCGTTTTAAGGGTAGTCGGTAATTACCGACCGTTTTAAGGGTAGTCGGTAAATTACCGACCGTTTGAAGGGTACTCGGTAAATTACCGACTACGTAGTATATTTCTACATTTGGATATTTTTTATTTTCGATAATACCGTAGGTAGTCGGTATTTTTTATTTCACTCGACTGCTTTGGGCTTTCTCCCCCCCCATCAACCCTAGCCCATATAAAACAGAAAATCTTAACCCTCCTCACTCTCCTCCTCCCAGCCGTTCCTCTTTCTTCTCTCACCTCCCTCTTCCTTCTCTCTCCTCCCAACTGTTCCTCGCAAATAAACCCTCCTCACTCTCCTCCCCCCAACCGTTTCTCGCAACCTCCTTCTATGTAGATCCGTTGAACTTGTGACAATCCAAGAGATTGACGGAACTCGCAAATGAAAATCGGGTGAATTTAGAAACTAAGGGTAAACCAGTACGAACACATCAAAGTTTTTCGGATTATTTTTTTATTTTTTTTAGATTTAATTGGTTTTCTTTTTTTTGTTTCTTTTAGATCTGTTTTGTTCATTTTGGTGTATCGTTTAATGTTAGATATTTATACTTAATTAATTTTCTTTACTGTCCATGTAATGGAAACAAGATTACAACCAGTGAGTGAATTTTGGTTCTACAAAATCTTGAAAATGGTCCAGTATAAACTCACTAAACGAACCAGAGTCAAGAAGTTGGCTTGATTTTACTTTTTAGAGTCAGATCGAATCTAGAACTAGAAATATAATTTGATAATTAATGACCCAAATTCGTCTCATACCAGTTGCAATTTCAAGCATAAATCTAAATTCCAATTTGTATATTTTTAACATGCATGATTAAAAAATTGAATCGTCAAAGTATTTTTTTGTTTAAATCCGTGCGAATTCAGTTTGTTTTACTTTATATTTTGTTTGTTTTATTTATTTTGGATGCAGCTCAAAGAAGAAGATAG ATGGAGATGGACTCGGGGGCTGACTCAGTGAGTTCAACACCTCGTTCAGTCCACCACAAACACCCACTCTCCGACGACAAACCACTGGTCCGTCTCATGGTTAGCTTTGGCGGTAAAATACTCCCACGTCCTCACGACAATCAACTCCGTTACGTCGGTGGCGATACCCGTATTGTCGCCGTCAACCGGTCTACTAGTTTCTCTCTCCTACTTTCTAAACTCTCGAAGCTTCTATTAACCCCTCAAAACTCATCCTCCACCGCCGCTGCTGCTTCTGTTGATTTTACTGTCAAATACCAGCTTCCCAACGAAGAACTAGACGCTCTTATTACGGTTTCCACCGACGAAGATGTCGAGAATATGATGGAGGAGTTCGATCGTCTATCTCTCTCCTCCACCGATAAGATCCCACGGTTGAGGCTTTTCCTGTTTCCGGATACTAATGGTGGTGGTGGCAGTGGACAAGTTTCTAGAAGTTCGAGTATCGCGTCGCTTCTAGATGGTTCTAGGAAAAGGGAGAATTGGTTTGTCGACGCTTTGAACGGCGGTTCTACTGGTGGGTTAGAGAGGGGTAGGTCGGAAGCGTCATCGATTGTTTCGGAAGTTCCGGATTATTTATTCGGGTTGGATAATTCCGATGAACCCCCACCTCCACCTGTGAAATTCAGGAATCGGTCCGGATTGAGTGAACCGGGTCCAGGTTCAGCACCCGGTTCACCTGCTTTTGGTTCAGCGTCATCCGCTCCATCCATGCCGAACCTTCCACCGGTGAAGACAAAACCCGAGAAGACAAATATGCATTCGGTTGATGATGGGATTGACCCGATGGGGCAGCAGATGGGTGGCCCGCTTTGGAGTCATAACATTAACACTAACCCGGGTTCTCCTTATCCAGCTCATACGGTGCAGCCGATGCCAGTCTATTATGTTCCTGCTGGCGGGTCCGGGCCGGGTTTGGTGCCTCACAGGAATGTAGTTCCGGTATCAGTACCTGTTCCCAACCCATACATGCCACAATACGGTCCGGGTCCCGTTCAGGTTCCAGTTGGGTATCCAGGTCCGGGTCGAGGTCCAATGTATGAAGTCCAAATGCAAGGGAATATGGTTCAGGGTCAAGGTTTAAGTGGGATGAATAATCAGCCATTATATTATGGGGTTAAAAATGGTGGAATGGTTGCTACTTATCCGGGTCCGGGTGCTGAAACTAAGGCTCAAAGAAGAAGATAG ATGGAGATGGACTCGGGGGCTGACTCAGTGAGTTCAACACCTCGTTCAGTCCACCACAAACACCCACTCTCCGACGACAAACCACTGGTCCGTCTCATGGTTAGCTTTGGCGGTAAAATACTCCCACGTCCTCACGACAATCAACTCCGTTACGTCGGTGGCGATACCCGTATTGTCGCCGTCAACCGGTCTACTAGTTTCTCTCTCCTACTTTCTAAACTCTCGAAGCTTCTATTAACCCCTCAAAACTCATCCTCCACCGCCGCTGCTGCTTCTGTTGATTTTACTGTCAAATACCAGCTTCCCAACGAAGAACTAGACGCTCTTATTACGGTTTCCACCGACGAAGATGTCGAGAATATGATGGAGGAGTTCGATCGTCTATCTCTCTCCTCCACCGATAAGATCCCACGGTTGAGGCTTTTCCTGTTTCCGGATACTAATGGTGGTGGTGGCAGTGGACAAGTTTCTAGAAGTTCGAGTATCGCGTCGCTTCTAGATGGTTCTAGGAAAAGGGAGAATTGGTTTGTCGACGCTTTGAACGGCGGTTCTACTGGTGGGTTAGAGAGGGGTAGGTCGGAAGCGTCATCGATTGTTTCGGAAGTTCCGGATTATTTATTCGGGTTGGATAATTCCGATGAACCCCCACCTCCACCTGTGAAATTCAGGAATCGGTCCGGATTGAGTGAACCGGGTCCAGGTTCAGCACCCGGTTCACCTGCTTTTGGTTCAGCGTCATCCGCTCCATCCATGCCGAACCTTCCACCGGTGAAGACAAAACCCGAGAAGACAAATATGCATTCGGTTGATGATGGGATTGACCCGATGGGGCAGCAGATGGGTGGCCCGCTTTGGAGTCATAACATTAACACTAACCCGGGTTCTCCTTATCCAGCTCATACGGTGCAGCCGATGCCAGTCTATTATGTTCCTGCTGGCGGGTCCGGGCCGGGTTTGGTGCCTCACAGGAATGTAGTTCCGGTATCAGTACCTGTTCCCAACCCATACATGCCACAATACGGTCCGGGTCCCGTTCAGGTTCCAGTTGGGTATCCAGGTCCGGGTCGAGGTCCAATGTATGAAGTCCAAATGCAAGGGAATATGGTTCAGGGTCAAGGTTTAAGTGGGATGAATAATCAGCCATTATATTATGGGGTTAAAAATGGTGGAATGGTTGCTACTTATCCGGGTCCGGGTGCTGAAACTAAGGCTCAAAGAAGAAGATAG MEMDSGADSVSSTPRSVHHKHPLSDDKPLVRLMVSFGGKILPRPHDNQLRYVGGDTRIVAVNRSTSFSLLLSKLSKLLLTPQNSSSTAAAASVDFTVKYQLPNEELDALITVSTDEDVENMMEEFDRLSLSSTDKIPRLRLFLFPDTNGGGGSGQVSRSSSIASLLDGSRKRENWFVDALNGGSTGGLERGRSEASSIVSEVPDYLFGLDNSDEPPPPPVKFRNRSGLSEPGPGSAPGSPAFGSASSAPSMPNLPPVKTKPEKTNMHSVDDGIDPMGQQMGGPLWSHNINTNPGSPYPAHTVQPMPVYYVPAGGSGPGLVPHRNVVPVSVPVPNPYMPQYGPGPVQVPVGYPGPGRGPMYEVQMQGNMVQGQGLSGMNNQPLYYGVKNGGMVATYPGPGAETKAQRRR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08319.1 vs. NCBI nr
Match: gi|902152247|gb|KNA05599.1| (hypothetical protein SOVF_188780 [Spinacia oleracea]) HSP 1 Score: 793.9 bits (2049), Expect = 1.300e-226 Identity = 398/400 (99.50%), Postives = 400/400 (100.00%), Query Frame = 1
BLAST of Spo08319.1 vs. NCBI nr
Match: gi|731376814|ref|XP_010667684.1| (PREDICTED: uncharacterized protein LOC104884696 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 568.9 bits (1465), Expect = 7.000e-159 Identity = 306/404 (75.74%), Postives = 337/404 (83.42%), Query Frame = 1
BLAST of Spo08319.1 vs. NCBI nr
Match: gi|359495708|ref|XP_002270693.2| (PREDICTED: uncharacterized protein LOC100261837 [Vitis vinifera]) HSP 1 Score: 337.8 bits (865), Expect = 2.600e-89 Identity = 231/432 (53.47%), Postives = 275/432 (63.66%), Query Frame = 1
BLAST of Spo08319.1 vs. NCBI nr
Match: gi|147778293|emb|CAN65141.1| (hypothetical protein VITISV_034615 [Vitis vinifera]) HSP 1 Score: 334.7 bits (857), Expect = 2.200e-88 Identity = 230/432 (53.24%), Postives = 274/432 (63.43%), Query Frame = 1
BLAST of Spo08319.1 vs. NCBI nr
Match: gi|661876089|emb|CDP19719.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 318.5 bits (815), Expect = 1.600e-83 Identity = 224/438 (51.14%), Postives = 270/438 (61.64%), Query Frame = 1
BLAST of Spo08319.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEB5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_188780 PE=4 SV=1) HSP 1 Score: 793.9 bits (2049), Expect = 9.300e-227 Identity = 398/400 (99.50%), Postives = 400/400 (100.00%), Query Frame = 1
BLAST of Spo08319.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B293_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_011290 PE=4 SV=1) HSP 1 Score: 568.9 bits (1465), Expect = 4.900e-159 Identity = 306/404 (75.74%), Postives = 337/404 (83.42%), Query Frame = 1
BLAST of Spo08319.1 vs. UniProtKB/TrEMBL
Match: A5B0Z1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034615 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 1.500e-88 Identity = 230/432 (53.24%), Postives = 274/432 (63.43%), Query Frame = 1
BLAST of Spo08319.1 vs. UniProtKB/TrEMBL
Match: A0A068VGP8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00007748001 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.100e-83 Identity = 224/438 (51.14%), Postives = 270/438 (61.64%), Query Frame = 1
BLAST of Spo08319.1 vs. UniProtKB/TrEMBL
Match: A0A059CDD6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00762 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 2.000e-80 Identity = 210/411 (51.09%), Postives = 256/411 (62.29%), Query Frame = 1
BLAST of Spo08319.1 vs. TAIR (Arabidopsis)
Match: AT4G05150.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 242.7 bits (618), Expect = 4.100e-64 Identity = 194/460 (42.17%), Postives = 248/460 (53.91%), Query Frame = 1
BLAST of Spo08319.1 vs. TAIR (Arabidopsis)
Match: AT2G01190.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 137.9 bits (346), Expect = 1.400e-32 Identity = 100/257 (38.91%), Postives = 148/257 (57.59%), Query Frame = 1
BLAST of Spo08319.1 vs. TAIR (Arabidopsis)
Match: AT3G18230.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 134.8 bits (338), Expect = 1.200e-31 Identity = 129/375 (34.40%), Postives = 187/375 (49.87%), Query Frame = 1
BLAST of Spo08319.1 vs. TAIR (Arabidopsis)
Match: AT5G09620.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 124.8 bits (312), Expect = 1.200e-28 Identity = 93/228 (40.79%), Postives = 123/228 (53.95%), Query Frame = 1
BLAST of Spo08319.1 vs. TAIR (Arabidopsis)
Match: AT5G64430.1 (Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 113.6 bits (283), Expect = 2.800e-25 Identity = 124/377 (32.89%), Postives = 169/377 (44.83%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08319.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08319.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08319.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo08319.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
|