Spo08338 (gene)

Overview
NameSpo08338
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTranscription factor bHLH147 (ATBS1 interacting factor 3) (Basic helix-loop-helix protein 147) (AtbHLH147) (bHLH 147) (Transcription factor EN 142) (bHLH transcription factor bHLH147)
Locationchr3 : 11680603 .. 11681325 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCATCACCTTCAGTAGTAGCGAATCCAGTCGCGAGCAGCTCAAACAGAGCAAGGGAATCAAGGCGTCGGAAAAAGAAGATGAAAATCTCTCAACAACAACAATCATCGCAATCTCTCTCTTCCGTAAACCCTAACAATGGCGACGGCATTCAAACTTTTTCTTGGAAATCCGAAAAAACTCAACAAATCTACTCTACAAAGCTCCTTCAAGCTCTCCGCCAAGTCCGTATTTCTCCTTCCACGTCATCGTCACCGTCAGCGGCGACACCTCGGCCAAGTCGGATAGTGAGAGAAGCCGCGGACAAAGCATTAGCGGTGGCGGCGCGTGGGAGGACACGCTGGAGCCGAGCTATCTTAATGAGCCGTTTCCGGATCAGCTTCCTTAACAAGAAGCTTCACAAACGCCAACGTGTGACGGCTACCGGAGTTAACAGGTCACCACCGCAAAGGAAGCCGAAGCTAGAGATATTAAAGCTTAAAGGGAAAGGTAATAGTTTACCGGCTGTCCAAAGGAAGGTGAAGACTCTTGGACGGTTAGTTCCCGGTTGCCGGAAAGAGCCGCTTCCGGTGATTCTTGAAGAAGCGACGGATTATATTCCGGCGCTTGAGATGCAAATTCGTGCCATGAGAGAGCTTCTCTCTCGTCTTAGTACCGGTGACAGAGATGGTGAAGGGTCTAGTTCCGGGCCCACGGCGCCGGAAAACGGTTCCATTTAG

mRNA sequence

ATGGAATCATCACCTTCAGTAGTAGCGAATCCAGTCGCGAGCAGCTCAAACAGAGCAAGGGAATCAAGGCGTCGGAAAAAGAAGATGAAAATCTCTCAACAACAACAATCATCGCAATCTCTCTCTTCCGTAAACCCTAACAATGGCGACGGCATTCAAACTTTTTCTTGGAAATCCGAAAAAACTCAACAAATCTACTCTACAAAGCTCCTTCAAGCTCTCCGCCAAGTCCGTATTTCTCCTTCCACGTCATCGTCACCGTCAGCGGCGACACCTCGGCCAAGTCGGATAGTGAGAGAAGCCGCGGACAAAGCATTAGCGGTGGCGGCGCGTGGGAGGACACGCTGGAGCCGAGCTATCTTAATGAGCCGTTTCCGGATCAGCTTCCTTAACAAGAAGCTTCACAAACGCCAACGTGTGACGGCTACCGGAGTTAACAGGTCACCACCGCAAAGGAAGCCGAAGCTAGAGATATTAAAGCTTAAAGGGAAAGGTAATAGTTTACCGGCTGTCCAAAGGAAGGTGAAGACTCTTGGACGGTTAGTTCCCGGTTGCCGGAAAGAGCCGCTTCCGGTGATTCTTGAAGAAGCGACGGATTATATTCCGGCGCTTGAGATGCAAATTCGTGCCATGAGAGAGCTTCTCTCTCGTCTTAGTACCGGTGACAGAGATGGTGAAGGGTCTAGTTCCGGGCCCACGGCGCCGGAAAACGGTTCCATTTAG

Coding sequence (CDS)

ATGGAATCATCACCTTCAGTAGTAGCGAATCCAGTCGCGAGCAGCTCAAACAGAGCAAGGGAATCAAGGCGTCGGAAAAAGAAGATGAAAATCTCTCAACAACAACAATCATCGCAATCTCTCTCTTCCGTAAACCCTAACAATGGCGACGGCATTCAAACTTTTTCTTGGAAATCCGAAAAAACTCAACAAATCTACTCTACAAAGCTCCTTCAAGCTCTCCGCCAAGTCCGTATTTCTCCTTCCACGTCATCGTCACCGTCAGCGGCGACACCTCGGCCAAGTCGGATAGTGAGAGAAGCCGCGGACAAAGCATTAGCGGTGGCGGCGCGTGGGAGGACACGCTGGAGCCGAGCTATCTTAATGAGCCGTTTCCGGATCAGCTTCCTTAACAAGAAGCTTCACAAACGCCAACGTGTGACGGCTACCGGAGTTAACAGGTCACCACCGCAAAGGAAGCCGAAGCTAGAGATATTAAAGCTTAAAGGGAAAGGTAATAGTTTACCGGCTGTCCAAAGGAAGGTGAAGACTCTTGGACGGTTAGTTCCCGGTTGCCGGAAAGAGCCGCTTCCGGTGATTCTTGAAGAAGCGACGGATTATATTCCGGCGCTTGAGATGCAAATTCGTGCCATGAGAGAGCTTCTCTCTCGTCTTAGTACCGGTGACAGAGATGGTGAAGGGTCTAGTTCCGGGCCCACGGCGCCGGAAAACGGTTCCATTTAG

Protein sequence

MESSPSVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAILMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGRLVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTAPENGSI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08338.1Spo08338.1mRNA


Homology
[Close]
BLAST of Spo08338.1 vs. NCBI nr
Match: gi|902224263|gb|KNA19740.1| (hypothetical protein SOVF_058710 [Spinacia oleracea])

HSP 1 Score: 439.1 bits (1128), Expect = 4.900e-120
Identity = 239/240 (99.58%), Postives = 240/240 (100.00%), Query Frame = 1 

		  

Query: 1   MESSPSVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSE 60
           MESSPSVVANPV+SSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSE
Sbjct: 1   MESSPSVVANPVSSSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSE 60

Query: 61  KTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAI 120
           KTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAI
Sbjct: 61  KTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAI 120

Query: 121 LMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGR 180
           LMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGR
Sbjct: 121 LMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGR 180

Query: 181 LVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTAPENGSI 240
           LVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTAPENGSI
Sbjct: 181 LVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTAPENGSI 240
[Close]
BLAST of Spo08338.1 vs. NCBI nr
Match: gi|731322194|ref|XP_010671759.1| (PREDICTED: transcription factor bHLH147-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 332.8 bits (852), Expect = 5.000e-88
Identity = 198/247 (80.16%), Postives = 207/247 (83.81%), Query Frame = 1 

		  

Query: 1   MESSPSVVANPVASSSNRARESRRRKKKMKISQQQQ-------SSQSLSSVNPNNGDGIQ 60
           MESSPSVV NPV S SNRARESRRRKKKMK  Q QQ       SSQSLSS+N       Q
Sbjct: 1   MESSPSVVVNPVTSGSNRARESRRRKKKMKTQQSQQHQQSSSSSSQSLSSINET-----Q 60

Query: 61  TFSWKSEKTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGR 120
            FSWKSEKTQQIYS+ LLQAL+QVRISPS S SPS A PRPSR VREAADKALAVAARGR
Sbjct: 61  KFSWKSEKTQQIYSSNLLQALQQVRISPS-SPSPSPAAPRPSRAVREAADKALAVAARGR 120

Query: 121 TRWSRAILMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQR 180
           TRWSRAILMSRFR+ +L+KKLHKRQRV+ATGVNRSPPQRKP   ILKLK KGNSLPAVQR
Sbjct: 121 TRWSRAILMSRFRLQYLHKKLHKRQRVSATGVNRSPPQRKP---ILKLKSKGNSLPAVQR 180

Query: 181 KVKTLGRLVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPT 240
           KVKTLGRLVPGCRKE LPVILEEATDYIPALEMQIRAMR +LS LST    GEGSS+GPT
Sbjct: 181 KVKTLGRLVPGCRKEGLPVILEEATDYIPALEMQIRAMRGILSLLST----GEGSSAGPT 234
[Close]
BLAST of Spo08338.1 vs. NCBI nr
Match: gi|225431998|ref|XP_002279307.1| (PREDICTED: transcription factor bHLH147 isoform X1 [Vitis vinifera])

HSP 1 Score: 197.6 bits (501), Expect = 2.500e-47
Identity = 133/234 (56.84%), Postives = 158/234 (67.52%), Query Frame = 1 

		  

Query: 6   SVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQI 65
           SV++NPV ++S+R+RES +RKKK K    Q  SQ     N N+        WKS+  QQ+
Sbjct: 4   SVISNPV-TNSDRSRESSKRKKKKK---NQIQSQVRDQQNQNHT------KWKSQVQQQL 63

Query: 66  YSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAILMSRF 125
           YS+KLLQALRQVR+  S        TPR  R VREAAD+ALAVAA+GRTRWSRAIL +R 
Sbjct: 64  YSSKLLQALRQVRLGSSNE------TPRRGRAVREAADRALAVAAKGRTRWSRAILTNRL 123

Query: 126 RISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGRLVPGC 185
           ++ F+    HKRQRVT TG NRS   +KPK+ IL+LKGK  +LPAVQRKV+ LGRLVPGC
Sbjct: 124 KLKFMK---HKRQRVTVTGQNRS---KKPKVSILRLKGK--NLPAVQRKVRVLGRLVPGC 183

Query: 186 RKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTAPENGS 240
           RK PLP ILEEATDYI ALEMQ+RAM  L   LS        +SS   A   GS
Sbjct: 184 RKLPLPDILEEATDYIAALEMQVRAMTALTELLSGAGAGASTTSSNSPADTLGS 213
[Close]
BLAST of Spo08338.1 vs. NCBI nr
Match: gi|731388150|ref|XP_010649502.1| (PREDICTED: transcription factor bHLH147 isoform X2 [Vitis vinifera])

HSP 1 Score: 194.1 bits (492), Expect = 2.800e-46
Identity = 131/229 (57.21%), Postives = 157/229 (68.56%), Query Frame = 1 

		  

Query: 6   SVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQI 65
           SV++NPV ++S+R+RES +RKKK K    Q  SQ     N N+        WKS+  QQ+
Sbjct: 4   SVISNPV-TNSDRSRESSKRKKKKK---NQIQSQVRDQQNQNHT------KWKSQVQQQL 63

Query: 66  YSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAILMSRF 125
           YS+KLLQALRQVR+  S        TPR  R VREAAD+ALAVAA+GRTRWSRAIL +R 
Sbjct: 64  YSSKLLQALRQVRLGSSNE------TPRRGRAVREAADRALAVAAKGRTRWSRAILTNRL 123

Query: 126 RISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGRLVPGC 185
           ++ F+    HKRQRVT TG NRS   +KPK+ IL+LKGK  +LPAVQRKV+ LGRLVPGC
Sbjct: 124 KLKFMK---HKRQRVTVTGQNRS---KKPKVSILRLKGK--NLPAVQRKVRVLGRLVPGC 183

Query: 186 RKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTA 235
           RK PLP ILEEATDYI ALEMQ+RA     +  S    D  GSS  PT+
Sbjct: 184 RKLPLPDILEEATDYIAALEMQVRAS----TTSSNSPADTLGSSRPPTS 204
[Close]
BLAST of Spo08338.1 vs. NCBI nr
Match: gi|802704863|ref|XP_012084104.1| (PREDICTED: transcription factor bHLH147-like [Jatropha curcas])

HSP 1 Score: 193.4 bits (490), Expect = 4.700e-46
Identity = 133/240 (55.42%), Postives = 161/240 (67.08%), Query Frame = 1 

		  

Query: 6   SVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQI 65
           ++++N   ++ N  R  R++KKK         SQ+ S  N N G       WK+E  QQ 
Sbjct: 4   TLISNQPVTNPNSDRSKRKKKKK---------SQAQSKENQNQGHA----KWKTEAQQQF 63

Query: 66  YSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAILMSRF 125
           YS KLLQAL QVR+SPS   SPSA  PR  R VREAAD+ALAVAA+GRTRWSRAIL SR 
Sbjct: 64  YSNKLLQALSQVRLSPS---SPSA--PRQGRAVREAADRALAVAAKGRTRWSRAILTSRI 123

Query: 126 RISFLNKKLHKRQRV-------TATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTL 185
           ++ F  +K HKRQRV       T TG +RS   +KP++ +L+LKGK  SLPAVQRKV+ L
Sbjct: 124 KLKF--RKQHKRQRVAETTVSATGTGGSRS---KKPRVSVLRLKGK--SLPAVQRKVRVL 183

Query: 186 GRLVPGCRKEPLPVILEEATDYIPALEMQIRAMR---ELLSRLSTGDRDG-EGSSSGPTA 235
           GRLVPGCRK+PLPVILEEATDYI ALEMQ+R M    ELLS  S+    G  GSS+G T+
Sbjct: 184 GRLVPGCRKQPLPVILEEATDYIAALEMQVRVMNAVAELLSGSSSSSGSGVAGSSAGSTS 218
[Close]
BLAST of Spo08338.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJS1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_058710 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 3.400e-120
Identity = 239/240 (99.58%), Postives = 240/240 (100.00%), Query Frame = 1 

		  

Query: 1   MESSPSVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSE 60
           MESSPSVVANPV+SSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSE
Sbjct: 1   MESSPSVVANPVSSSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSE 60

Query: 61  KTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAI 120
           KTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAI
Sbjct: 61  KTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAI 120

Query: 121 LMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGR 180
           LMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGR
Sbjct: 121 LMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGR 180

Query: 181 LVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTAPENGSI 240
           LVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTAPENGSI
Sbjct: 181 LVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTAPENGSI 240
[Close]
BLAST of Spo08338.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FK47_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g054410 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 3.500e-88
Identity = 198/247 (80.16%), Postives = 207/247 (83.81%), Query Frame = 1 

		  

Query: 1   MESSPSVVANPVASSSNRARESRRRKKKMKISQQQQ-------SSQSLSSVNPNNGDGIQ 60
           MESSPSVV NPV S SNRARESRRRKKKMK  Q QQ       SSQSLSS+N       Q
Sbjct: 1   MESSPSVVVNPVTSGSNRARESRRRKKKMKTQQSQQHQQSSSSSSQSLSSINET-----Q 60

Query: 61  TFSWKSEKTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGR 120
            FSWKSEKTQQIYS+ LLQAL+QVRISPS S SPS A PRPSR VREAADKALAVAARGR
Sbjct: 61  KFSWKSEKTQQIYSSNLLQALQQVRISPS-SPSPSPAAPRPSRAVREAADKALAVAARGR 120

Query: 121 TRWSRAILMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQR 180
           TRWSRAILMSRFR+ +L+KKLHKRQRV+ATGVNRSPPQRKP   ILKLK KGNSLPAVQR
Sbjct: 121 TRWSRAILMSRFRLQYLHKKLHKRQRVSATGVNRSPPQRKP---ILKLKSKGNSLPAVQR 180

Query: 181 KVKTLGRLVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPT 240
           KVKTLGRLVPGCRKE LPVILEEATDYIPALEMQIRAMR +LS LST    GEGSS+GPT
Sbjct: 181 KVKTLGRLVPGCRKEGLPVILEEATDYIPALEMQIRAMRGILSLLST----GEGSSAGPT 234
[Close]
BLAST of Spo08338.1 vs. UniProtKB/TrEMBL
Match: F6H714_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00750 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.700e-47
Identity = 133/234 (56.84%), Postives = 158/234 (67.52%), Query Frame = 1 

		  

Query: 6   SVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQI 65
           SV++NPV ++S+R+RES +RKKK K    Q  SQ     N N+        WKS+  QQ+
Sbjct: 4   SVISNPV-TNSDRSRESSKRKKKKK---NQIQSQVRDQQNQNHT------KWKSQVQQQL 63

Query: 66  YSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAILMSRF 125
           YS+KLLQALRQVR+  S        TPR  R VREAAD+ALAVAA+GRTRWSRAIL +R 
Sbjct: 64  YSSKLLQALRQVRLGSSNE------TPRRGRAVREAADRALAVAAKGRTRWSRAILTNRL 123

Query: 126 RISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGRLVPGC 185
           ++ F+    HKRQRVT TG NRS   +KPK+ IL+LKGK  +LPAVQRKV+ LGRLVPGC
Sbjct: 124 KLKFMK---HKRQRVTVTGQNRS---KKPKVSILRLKGK--NLPAVQRKVRVLGRLVPGC 183

Query: 186 RKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTGDRDGEGSSSGPTAPENGS 240
           RK PLP ILEEATDYI ALEMQ+RAM  L   LS        +SS   A   GS
Sbjct: 184 RKLPLPDILEEATDYIAALEMQVRAMTALTELLSGAGAGASTTSSNSPADTLGS 213
[Close]
BLAST of Spo08338.1 vs. UniProtKB/TrEMBL
Match: A0A067K6P3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19020 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.300e-46
Identity = 133/240 (55.42%), Postives = 161/240 (67.08%), Query Frame = 1 

		  

Query: 6   SVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQI 65
           ++++N   ++ N  R  R++KKK         SQ+ S  N N G       WK+E  QQ 
Sbjct: 4   TLISNQPVTNPNSDRSKRKKKKK---------SQAQSKENQNQGHA----KWKTEAQQQF 63

Query: 66  YSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAILMSRF 125
           YS KLLQAL QVR+SPS   SPSA  PR  R VREAAD+ALAVAA+GRTRWSRAIL SR 
Sbjct: 64  YSNKLLQALSQVRLSPS---SPSA--PRQGRAVREAADRALAVAAKGRTRWSRAILTSRI 123

Query: 126 RISFLNKKLHKRQRV-------TATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTL 185
           ++ F  +K HKRQRV       T TG +RS   +KP++ +L+LKGK  SLPAVQRKV+ L
Sbjct: 124 KLKF--RKQHKRQRVAETTVSATGTGGSRS---KKPRVSVLRLKGK--SLPAVQRKVRVL 183

Query: 186 GRLVPGCRKEPLPVILEEATDYIPALEMQIRAMR---ELLSRLSTGDRDG-EGSSSGPTA 235
           GRLVPGCRK+PLPVILEEATDYI ALEMQ+R M    ELLS  S+    G  GSS+G T+
Sbjct: 184 GRLVPGCRKQPLPVILEEATDYIAALEMQVRVMNAVAELLSGSSSSSGSGVAGSSAGSTS 218
[Close]
BLAST of Spo08338.1 vs. UniProtKB/TrEMBL
Match: A0A103XZI5_CYNCS (Myc-type, basic helix-loop-helix (BHLH) domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021996 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.800e-45
Identity = 125/222 (56.31%), Postives = 159/222 (71.62%), Query Frame = 1 

		  

Query: 3   SSPSVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKT 62
           +SP+ +++PV ++  RAR+S +R+KK KI Q+Q        +N N  +  Q   WKSE  
Sbjct: 2   ASPTFISDPVTNNMERARDSSKRRKKKKI-QRQSGGGGRDQMNHNLSNN-QMLPWKSEAQ 61

Query: 63  QQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAILM 122
           QQ+YS+KLLQALRQVRIS S SS PSA  PR  R VREAAD+ LAV A+G TRWSRAIL 
Sbjct: 62  QQVYSSKLLQALRQVRIS-SDSSPPSA--PRRGRAVREAADRVLAVTAKGGTRWSRAILT 121

Query: 123 SRFRISFLNKKLHKRQR---VTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLG 182
           ++ ++ F+  K +KRQR   VTATG +R    +KP++ IL+LK K  +LPAVQRK   LG
Sbjct: 122 NKLKLKFM--KNNKRQRGAVVTATGNSRL---KKPRVSILRLKTK--NLPAVQRKTHVLG 181

Query: 183 RLVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLSTG 222
           RLVPGCRK+PLPV+LEEATDYI ALEMQ++AM  L + LS G
Sbjct: 182 RLVPGCRKQPLPVVLEEATDYIAALEMQVKAMAALANLLSGG 211
[Close]
BLAST of Spo08338.1 vs. ExPASy Swiss-Prot
Match: BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.700e-43
Identity = 113/214 (52.80%), Postives = 138/214 (64.49%), Query Frame = 1 

		  

Query: 11  PVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQIYSTKL 70
           P  +SSN  R  R+RKKK           S SSV  +    I    W+SEK QQIYSTKL
Sbjct: 14  PTTTSSNSDRSRRKRKKK----------SSPSSVEKSPSPSISLEKWRSEKQQQIYSTKL 73

Query: 71  LQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAILMSRFRISFL 130
           + ALR++RIS   SSS S++ PR  R VRE AD+ALAVAARG+T WSRAIL    ++ F 
Sbjct: 74  VHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKF- 133

Query: 131 NKKLHKRQRV----TATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGRLVPGCR 190
             + HKRQR+    T T    S   +K +  +L+LK KG  LPAVQRKVK L RLVPGCR
Sbjct: 134 --RKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKG--LPAVQRKVKVLSRLVPGCR 193

Query: 191 KEPLPVILEEATDYIPALEMQIRAMRELLSRLST 221
           K+ LPV+LEE TDYI A+EMQIR M  +LS +S+
Sbjct: 194 KQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSS 212
[Close]
BLAST of Spo08338.1 vs. ExPASy Swiss-Prot
Match: BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.700e-35
Identity = 105/227 (46.26%), Postives = 141/227 (62.11%), Query Frame = 1 

		  

Query: 1   MESSPSVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSE 60
           M S  S +  P +++S+  R    RKK+   S    S  S SSV+     G     W+SE
Sbjct: 1   MASLISDIEPPTSTTSDLVR----RKKRSSASSAASSRSSASSVS-----GEIHARWRSE 60

Query: 61  KTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAI 120
           K Q+IYS KL QAL+QVR++ S S+S S    +  + VREAAD+ALAV+ARGRT WSRAI
Sbjct: 61  KQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAI 120

Query: 121 LMSRFRISFLNKK-------LHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQR 180
           L +R ++ F  ++       +     V ++  NRS   RK ++ +L+L  K  S+P V R
Sbjct: 121 LANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRS---RKRRVSVLRLNKK--SIPDVNR 180

Query: 181 KVKTLGRLVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLST 221
           KV+ LGRLVPGC K+ +PVILEEATDYI ALEMQ+RAM  L+  LS+
Sbjct: 181 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSS 213
[Close]
BLAST of Spo08338.1 vs. ExPASy Swiss-Prot
Match: BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.200e-25
Identity = 91/208 (43.75%), Postives = 123/208 (59.13%), Query Frame = 1 

		  

Query: 14  SSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQIYSTKLLQA 73
           S  N    SRR  KK +IS+  ++      VN  +        WK+ + QQIY+ KL++A
Sbjct: 8   SIENTGESSRR--KKPRISETAEAEIEARRVNEES-----LKRWKTNRVQQIYACKLVEA 67

Query: 74  LRQVRISPSTSSSPSA--ATPRPSRIVREAADKALAVAARGRTRWSRAILMSRFRISFLN 133
           LR+VR   ST+S+          +R +R+ AD+ LA +ARG TRWSRAIL SR R     
Sbjct: 68  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKL-- 127

Query: 134 KKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGRLVPGCRKEPLP 193
            K H++ +  +TG  +S   RK   E  ++K     LPAV+RK+K LGRLVPGCRK  +P
Sbjct: 128 -KKHRKAK-KSTGNCKS---RKGLTETNRIK-----LPAVERKLKILGRLVPGCRKVSVP 187

Query: 194 VILEEATDYIPALEMQIRAMRELLSRLS 220
            +L+EATDYI ALEMQ+RAM  L   L+
Sbjct: 188 NLLDEATDYIAALEMQVRAMEALAELLT 196
[Close]
BLAST of Spo08338.1 vs. ExPASy Swiss-Prot
Match: BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.400e-20
Identity = 66/163 (40.49%), Postives = 85/163 (52.15%), Query Frame = 1 

		  

Query: 57  WKSEKTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRW 116
           W++   Q++YS KL  AL++ R S +               VR+ ADK LA  ARG TRW
Sbjct: 63  WRATTAQKVYSLKLYDALQRSRRSAT---------------VRDTADKVLATTARGATRW 122

Query: 117 SRAILMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVK 176
           SRAIL+SRF  S   ++  K     A  +  S              G+   L AV  +V+
Sbjct: 123 SRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGS-----------GRRRKLSAVGNRVR 182

Query: 177 TLGRLVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLS 220
            LG LVPGCR+  LP +L+E  DYI ALEMQ+RAM  L   LS
Sbjct: 183 VLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILS 199
[Close]
BLAST of Spo08338.1 vs. TAIR (Arabidopsis)
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors)

HSP 1 Score: 176.4 bits (446), Expect = 2.100e-44
Identity = 113/214 (52.80%), Postives = 138/214 (64.49%), Query Frame = 1 

		  

Query: 11  PVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQIYSTKL 70
           P  +SSN  R  R+RKKK           S SSV  +    I    W+SEK QQIYSTKL
Sbjct: 14  PTTTSSNSDRSRRKRKKK----------SSPSSVEKSPSPSISLEKWRSEKQQQIYSTKL 73

Query: 71  LQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAILMSRFRISFL 130
           + ALR++RIS   SSS S++ PR  R VRE AD+ALAVAARG+T WSRAIL    ++ F 
Sbjct: 74  VHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKF- 133

Query: 131 NKKLHKRQRV----TATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGRLVPGCR 190
             + HKRQR+    T T    S   +K +  +L+LK KG  LPAVQRKVK L RLVPGCR
Sbjct: 134 --RKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKG--LPAVQRKVKVLSRLVPGCR 193

Query: 191 KEPLPVILEEATDYIPALEMQIRAMRELLSRLST 221
           K+ LPV+LEE TDYI A+EMQIR M  +LS +S+
Sbjct: 194 KQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSS 212
[Close]
BLAST of Spo08338.1 vs. TAIR (Arabidopsis)
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 9.400e-37
Identity = 105/227 (46.26%), Postives = 141/227 (62.11%), Query Frame = 1 

		  

Query: 1   MESSPSVVANPVASSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSE 60
           M S  S +  P +++S+  R    RKK+   S    S  S SSV+     G     W+SE
Sbjct: 1   MASLISDIEPPTSTTSDLVR----RKKRSSASSAASSRSSASSVS-----GEIHARWRSE 60

Query: 61  KTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRWSRAI 120
           K Q+IYS KL QAL+QVR++ S S+S S    +  + VREAAD+ALAV+ARGRT WSRAI
Sbjct: 61  KQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAI 120

Query: 121 LMSRFRISFLNKK-------LHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQR 180
           L +R ++ F  ++       +     V ++  NRS   RK ++ +L+L  K  S+P V R
Sbjct: 121 LANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRS---RKRRVSVLRLNKK--SIPDVNR 180

Query: 181 KVKTLGRLVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLST 221
           KV+ LGRLVPGC K+ +PVILEEATDYI ALEMQ+RAM  L+  LS+
Sbjct: 181 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSS 213
[Close]
BLAST of Spo08338.1 vs. TAIR (Arabidopsis)
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 118.2 bits (295), Expect = 6.800e-27
Identity = 91/208 (43.75%), Postives = 123/208 (59.13%), Query Frame = 1 

		  

Query: 14  SSSNRARESRRRKKKMKISQQQQSSQSLSSVNPNNGDGIQTFSWKSEKTQQIYSTKLLQA 73
           S  N    SRR  KK +IS+  ++      VN  +        WK+ + QQIY+ KL++A
Sbjct: 8   SIENTGESSRR--KKPRISETAEAEIEARRVNEES-----LKRWKTNRVQQIYACKLVEA 67

Query: 74  LRQVRISPSTSSSPSA--ATPRPSRIVREAADKALAVAARGRTRWSRAILMSRFRISFLN 133
           LR+VR   ST+S+          +R +R+ AD+ LA +ARG TRWSRAIL SR R     
Sbjct: 68  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKL-- 127

Query: 134 KKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVKTLGRLVPGCRKEPLP 193
            K H++ +  +TG  +S   RK   E  ++K     LPAV+RK+K LGRLVPGCRK  +P
Sbjct: 128 -KKHRKAK-KSTGNCKS---RKGLTETNRIK-----LPAVERKLKILGRLVPGCRKVSVP 187

Query: 194 VILEEATDYIPALEMQIRAMRELLSRLS 220
            +L+EATDYI ALEMQ+RAM  L   L+
Sbjct: 188 NLLDEATDYIAALEMQVRAMEALAELLT 196
[Close]
BLAST of Spo08338.1 vs. TAIR (Arabidopsis)
Match: AT3G05800.1 (AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1)

HSP 1 Score: 100.1 bits (248), Expect = 1.900e-21
Identity = 66/163 (40.49%), Postives = 85/163 (52.15%), Query Frame = 1 

		  

Query: 57  WKSEKTQQIYSTKLLQALRQVRISPSTSSSPSAATPRPSRIVREAADKALAVAARGRTRW 116
           W++   Q++YS KL  AL++ R S +               VR+ ADK LA  ARG TRW
Sbjct: 63  WRATTAQKVYSLKLYDALQRSRRSAT---------------VRDTADKVLATTARGATRW 122

Query: 117 SRAILMSRFRISFLNKKLHKRQRVTATGVNRSPPQRKPKLEILKLKGKGNSLPAVQRKVK 176
           SRAIL+SRF  S   ++  K     A  +  S              G+   L AV  +V+
Sbjct: 123 SRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGS-----------GRRRKLSAVGNRVR 182

Query: 177 TLGRLVPGCRKEPLPVILEEATDYIPALEMQIRAMRELLSRLS 220
            LG LVPGCR+  LP +L+E  DYI ALEMQ+RAM  L   LS
Sbjct: 183 VLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILS 199
The following BLAST results are available for this feature:
BLAST of Spo08338.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902224263|gb|KNA19740.1|4.9e-12099.5hypothetical protein SOVF_0587... [more]
gi|731322194|ref|XP_010671759.1|5.0e-8880.1PREDICTED: transcription facto... [more]
gi|225431998|ref|XP_002279307.1|2.5e-4756.8PREDICTED: transcription facto... [more]
gi|731388150|ref|XP_010649502.1|2.8e-4657.2PREDICTED: transcription facto... [more]
gi|802704863|ref|XP_012084104.1|4.7e-4655.4PREDICTED: transcription facto... [more]
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BLAST of Spo08338.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RJS1_SPIOL3.4e-12099.5Uncharacterized protein OS=Spi... [more]
A0A0J8FK47_BETVU3.5e-8880.1Uncharacterized protein OS=Bet... [more]
F6H714_VITVI1.7e-4756.8Putative uncharacterized prote... [more]
A0A067K6P3_JATCU3.3e-4655.4Uncharacterized protein OS=Jat... [more]
A0A103XZI5_CYNCS2.8e-4556.3Myc-type, basic helix-loop-hel... [more]
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BLAST of Spo08338.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
BH147_ARATH3.7e-4352.8Transcription factor bHLH147 O... [more]
BH148_ARATH1.7e-3546.2Transcription factor bHLH148 O... [more]
BH149_ARATH1.2e-2543.7Transcription factor bHLH149 O... [more]
BH150_ARATH3.4e-2040.4Transcription factor bHLH150 O... [more]
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BLAST of Spo08338.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G17100.12.1e-4452.8sequence-specific DNA binding ... [more]
AT3G06590.19.4e-3746.2basic helix-loop-helix (bHLH) ... [more]
AT1G09250.16.8e-2743.7basic helix-loop-helix (bHLH) ... [more]
AT3G05800.11.9e-2140.4AtBS1(activation-tagged BRI1 s... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 174..218
score: 8.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 174..220
score: 1.4
NoneNo IPR availablePANTHERPTHR33124FAMILY NOT NAMEDcoord: 32..232
score: 1.5
NoneNo IPR availablePANTHERPTHR33124:SF12TRANSCRIPTION FACTOR BHLH147-RELATEDcoord: 32..232
score: 1.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009409 response to cold
biological_process GO:0043067 regulation of programmed cell death
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0006972 hyperosmotic response
biological_process GO:0006952 defense response
biological_process GO:0009414 response to water deprivation
biological_process GO:0006508 proteolysis
biological_process GO:0006629 lipid metabolic process
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006580 ethanolamine metabolic process
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009651 response to salt stress
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0031347 regulation of defense response
biological_process GO:0016310 phosphorylation
biological_process GO:0055085 transmembrane transport
biological_process GO:0006464 cellular protein modification process
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0033554 cellular response to stress
biological_process GO:0098542 defense response to other organism
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0045087 innate immune response
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0008152 metabolic process
biological_process GO:0048519 negative regulation of biological process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005622 intracellular
cellular_component GO:0005576 extracellular region
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0016301 kinase activity
molecular_function GO:0043565 sequence-specific DNA binding
RNA-Seq Expression