Spo08376 (gene)

Overview
NameSpo08376
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSNARE associated Golgi protein family isoform 1
Locationchr3 : 21150079 .. 21153413 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATGCTGTTCTCCATGTAACTTGCGTTAGTGTCTAGCAAACACAACTAGAAACCGGTAGCTCACTAGCTCCCTCACTCTTTACGCAAACTCGTGTCGTTGAAGAGAGAGAAAAAGACATTATAAAACAGACCCCAACAAAACAAATCTTCATATAAATTCATTCTCGACTACATACATACAGATCTGCTCATTTTTGTTTTTCGCATCAATAACCAATTCGTTCCCCAAAAGCATCATCTGCGTTTGTTCGGAAAAGGTGATATGCTAATTAATTTTTATTGGGTTTGATTTTTTCAAAAAAAGGGCGCATTTTGCAAGATGGGCTCCAGGAAAAAATCAAGCAATTCGTCTAATTCTTCTGCTGCTTCATCGTCTAGGGACTCTAATTCTTCGATCTCAGGTTACCCTTCTATTTTCCAGTAATTTGTTATGATTATTGTTATTATTGATTGGTTGTTACTATGATTAATAGAATTTGGGGTTTGTTCTTTTGTCCTTTTGTTAGATTGTTTATAGTTGTGAAGTTATTTGTTAGTTTGACTCTGATTTCAATCTGGGTTTGGATGATTTCTTTTGTTTTTGTTTGAAATTTGTGTTAAATTTGGCAGAAAAGATTAGGTATTTGAGTATTCATTCCACAATAAGGTTGACTCCATCGATATTGGAGGTGGAATGTGTACAATTACCGGTTTATATGCCTTTCGTTTTACAAGGAAGTGTATGTTAATATCTGATATTGATCAATCTCACACAAATAAATAATAAAACGGTTGACGCAATTTATTACTGGTGTGTATGTTGTTATGAAATTTGGAATTGCAAAGGGGGTATGGACTTTATAGAAGGCTGAAGGTTAGGTGGTGGGTTGGACAATCATTTTGTTATAAAGCGGATAAAGTTTTTGGCTTTTGCAATGTGTGGATTGTGGAGAATGGGGTTCTTCTGTATCACCATAATGACGATCTTGGAATCGGCATTATAAACTAAGGCAGCTCTGAGTGCTCCACATTGTTTATCATGCTCATTTTTCATGTATTATATGACAATTTTGGATGAGAACCAGATCTAGGATGATGGTAAGGCTGTTTTCGGAATCTTTGTAGTGAAACGGGGTCATTACTTTTTGGCTGTGTTAGTTCGATACTTAGGTTGACAGAGGGTGTCGGATCCGACACTTCGACACGACATGACACCCAAATATATAGTGGCCTTGTATGAAATTTATTACATCTAGAGTGTCGGATCCTCCGATCCCTTGTCGGACACGACACCCCAATAAGAGTCTGAGCAACATAGCTTTTTGGTACTTAGTCGTAGAATCATACACTCCATTCCAATTATAAATTGTCCGCATAATGACTTGAATGCTTTTTAAAGAAAATTATTGCTTCATAAGTTCATAGTTGTCCACTTGTCCACCGATGTATGTTCTGGATTAGTACATGTAAAGCAATGATGAGTTGTTAGAAAACTTATGCGATGTCAATTTATGGTTGGGCTTTAAAGATCAATGTTCTAGGAGTGATCAGCTAGTTAGAAAATGAATTGAAAACCTTCACAGCTGAAATTTTTGTGTAAGGCTATGTTCTATTCACTTGGAAGCCTCTATACGTATGTGAAGGGGATCGATACGATTTAGAAAATCATTTGGATGCCTTCACAGCTGCAATCTTTGTGTAAGGCTATGTTATATTCACTTGGAAGCCTCTATACTTATCTGAAAGGAACTAATACGAATATTAATTGGATTTACTATACCTTATCTGAACTTAATTTTGGGTGTAAAGTTAATATGTTTGCCCTTATGAAATTATTAATTTTGTAGACCTAATCTGAACTTATCTCAACTTGCTAGACCTGAAACATTGTTTAAAGTGAAAAGAACAATGCATATCTTTATAATTTGTCCTTTGTAACATAAATCCCGCTCAACTTGATTTTGCTCTTTTCTATTTTTTCACATAAATGACAAGTGATATGTTTGATGGTCAAAGAACTTTGAATATACTTGTAAATGGTTCCTTCATGTGGAATTACTGAATACCAGAAACTGTTGTTAAAAATTAGGAGTTGACTTTGTGGCTCATCTTGGAAGTTTATGTATGTTGCCTGGATCAAACCATAGAATGTTTTCTTACCTGCTTGTTCATGGTAACTAATCTGGGGGCTAGTGAACGTATCAATCTGATGGTTTGTTTGTGGTTGAGTACTTGAGTGTCACCACTCAAAACTTCATTAACTATATTTCTTATTTAACCATTAATGATTAGGTCAGCAGCAAGTTGGCTGTCTTTGTAATCTTTGGGGCAAGCTTGCCATTTTCAGGGAATGGCATATACTTTTTTGTTCTCAAAAGTATATTGGAGTTCTTTCTGACACTAATATGCTACATGCAGGACTACGTGAGAAGCATCAACATGAACTCGAGACTTTGACTTTGACTACACATCCGTGCAGAACATTGAAGTTTTTTGCTTTTGCTGTTTTTGATTATGTGAAGCAATCAATTTCATATCTCTTAGAAAAAGGTGGTTGGCTTTTAGTCTGGAGTACCTTGGTAATGTTATGTGGAATTCTCTTGGCAACTATTGAAGGTTCTCATGAAAAGGTACTATATTCTTGACTTTCATCATACTGTATAATTGATTATTCTTGGTAGACTGCATATTAGTAAACAATCATAAATTTGAGTCAAAAGAGACACACCGTTATCAGTGCTCAAAATTTGTAGAAGCTGGGTTATCTATGTTTTCATGATTATAAGGTTGTTAAGGTCGATATAGATCATTGTATATTTAATTGATTACTTATATATGGAGTTTTTCATTCTAGAGAAACAAAAAGTTTTGTATCCACTCAAATCACCAGTAATCGGGGTTTATTTTGGTGTTGCTTTTCTCTTGCAGCATGTCCAGGAGGCTCTGCGGTACCTTCAGTTTGTATTATGGTGGACAGCCCTTGGTGTTGCATCTTCGATTGGCCTTGGTATGTGCATACATTGATGGGGAAGATTATTTGTTTTGTTTGTTGTAGCATTACATGGTAACAGCTAATTAAATGGGTAATTGTTTGTTGTAGAATTACATGGTAGCAGCTAGTTAAATGCGGAACTGTCACAAAGTGACATGACAAGCATACTGATTTTGCTTTCTTCTTTTTGTTTTGTACTGTTTACATCGTCTTTTTTTTTTGATAGCATGATTGTTTATTTACTCCCTCTGTATTTATTTAAGGGATACACTTGCCTTTTCCGGCCGTATTTATTTAAGAGATACACTTGCCATTTTTAGTAACTTATCAACCCCACCATCTAATTAAATAATATATCTACAC

mRNA sequence

GGATGCTGTTCTCCATGTAACTTGCGTTAGTGTCTAGCAAACACAACTAGAAACCGGTAGCTCACTAGCTCCCTCACTCTTTACGCAAACTCGTGTCGTTGAAGAGAGAGAAAAAGACATTATAAAACAGACCCCAACAAAACAAATCTTCATATAAATTCATTCTCGACTACATACATACAGATCTGCTCATTTTTGTTTTTCGCATCAATAACCAATTCGTTCCCCAAAAGCATCATCTGCGTTTGTTCGGAAAAGGTGATATGCTAATTAATTTTTATTGGGTTTGATTTTTTCAAAAAAAGGGCGCATTTTGCAAGATGGGCTCCAGGAAAAAATCAAGCAATTCGTCTAATTCTTCTGCTGCTTCATCGTCTAGGGACTCTAATTCTTCGATCTCAGGACTACGTGAGAAGCATCAACATGAACTCGAGACTTTGACTTTGACTACACATCCGTGCAGAACATTGAAGTTTTTTGCTTTTGCTGTTTTTGATTATGTGAAGCAATCAATTTCATATCTCTTAGAAAAAGGTGGTTGGCTTTTAGTCTGGAGTACCTTGGTAATGTTATGTGGAATTCTCTTGGCAACTATTGAAGGTTCTCATGAAAAGCATGTCCAGGAGGCTCTGCGGTACCTTCAGTTTGTATTATGGTGGACAGCCCTTGGTGTTGCATCTTCGATTGGCCTTGGTATGTGCATACATTGATGGGGAAGATTATTTGTTTTGTTTGTTGTAGCATTACATGGTAACAGCTAATTAAATGGGTAATTGTTTGTTGTAGAATTACATGGTAGCAGCTAGTTAAATGCGGAACTGTCACAAAGTGACATGACAAGCATACTGATTTTGCTTTCTTCTTTTTGTTTTGTACTGTTTACATCGTCTTTTTTTTTTGATAGCATGATTGTTTATTTACTCCCTCTGTATTTATTTAAGGGATACACTTGCCTTTTCCGGCCGTATTTATTTAAGAGATACACTTGCCATTTTTAGTAACTTATCAACCCCACCATCTAATTAAATAATATATCTACAC

Coding sequence (CDS)

ATGGGCTCCAGGAAAAAATCAAGCAATTCGTCTAATTCTTCTGCTGCTTCATCGTCTAGGGACTCTAATTCTTCGATCTCAGGACTACGTGAGAAGCATCAACATGAACTCGAGACTTTGACTTTGACTACACATCCGTGCAGAACATTGAAGTTTTTTGCTTTTGCTGTTTTTGATTATGTGAAGCAATCAATTTCATATCTCTTAGAAAAAGGTGGTTGGCTTTTAGTCTGGAGTACCTTGGTAATGTTATGTGGAATTCTCTTGGCAACTATTGAAGGTTCTCATGAAAAGCATGTCCAGGAGGCTCTGCGGTACCTTCAGTTTGTATTATGGTGGACAGCCCTTGGTGTTGCATCTTCGATTGGCCTTGGTATGTGCATACATTGA

Protein sequence

MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDYVKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVASSIGLGMCIH
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08376.1Spo08376.1mRNA


Homology
[Close]
BLAST of Spo08376.1 vs. NCBI nr
Match: gi|902195013|gb|KNA12724.1| (hypothetical protein SOVF_123360 [Spinacia oleracea])

HSP 1 Score: 241.5 bits (615), Expect = 8.100e-61
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 1 

		  

Query: 1   MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY 60
           MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY
Sbjct: 1   MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY 60

Query: 61  VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS 120
           VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS
Sbjct: 61  VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS 120

Query: 121 SIGLGMCIH 130
           SIGLG  +H
Sbjct: 121 SIGLGSGLH 129
[Close]
BLAST of Spo08376.1 vs. NCBI nr
Match: gi|731375909|ref|XP_010667401.1| (PREDICTED: vacuole membrane protein KMS1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 193.7 bits (491), Expect = 1.900e-46
Identity = 101/129 (78.29%), Postives = 112/129 (86.82%), Query Frame = 1 

		  

Query: 1   MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY 60
           MGS+KK SNSSNSSAASSS+D NSSI  LREKHQHELETLTLT  P +TLKFF  A++ Y
Sbjct: 1   MGSKKKPSNSSNSSAASSSKDPNSSIPRLREKHQHELETLTLTAQPFKTLKFFVLALYGY 60

Query: 61  VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS 120
           VKQS +YLLEKGGWLLV+STLV+ CG+L ATIEG HEKHVQE LRY+QFVLWWTALGVAS
Sbjct: 61  VKQSFAYLLEKGGWLLVFSTLVISCGVLSATIEGPHEKHVQEVLRYIQFVLWWTALGVAS 120

Query: 121 SIGLGMCIH 130
           SIGLG  +H
Sbjct: 121 SIGLGSGLH 129
[Close]
BLAST of Spo08376.1 vs. NCBI nr
Match: gi|731348322|ref|XP_010685438.1| (PREDICTED: vacuole membrane protein KMS1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 171.8 bits (434), Expect = 7.900e-40
Identity = 79/102 (77.45%), Postives = 91/102 (89.22%), Query Frame = 1 

		  

Query: 28  GLREKHQHELETLTLTTHPCRTLKFFAFAVFDYVKQSISYLLEKGGWLLVWSTLVMLCGI 87
           G+ EKHQHEL++LTLTT PC TLKFF FA++DYVKQS+SYLL KGGWLLV+S+LVM CG+
Sbjct: 33  GVNEKHQHELKSLTLTTKPCTTLKFFVFAMYDYVKQSVSYLLAKGGWLLVFSSLVMSCGV 92

Query: 88  LLATIEGSHEKHVQEALRYLQFVLWWTALGVASSIGLGMCIH 130
           LLATIEGSH KH +E LRY+QFVLWWTALGVASSIGLG  +H
Sbjct: 93  LLATIEGSHGKHAEEVLRYIQFVLWWTALGVASSIGLGSGLH 134
[Close]
BLAST of Spo08376.1 vs. NCBI nr
Match: gi|645236009|ref|XP_008224532.1| (PREDICTED: vacuole membrane protein 1 [Prunus mume])

HSP 1 Score: 158.7 bits (400), Expect = 6.900e-36
Identity = 87/129 (67.44%), Postives = 102/129 (79.07%), Query Frame = 1 

		  

Query: 1   MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY 60
           MGSRK++ NSS+SS+ SSS+ +  SISGL EKHQ ELE LTLTT P RTLKFF  AV  Y
Sbjct: 1   MGSRKQA-NSSSSSSPSSSQRTEISISGLSEKHQEELENLTLTTQPFRTLKFFILAVIQY 60

Query: 61  VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS 120
           VK+SISYLL KGGWL++ ST+V   G+LL TI+G HEKHV+E L+Y QF LWW ALGVAS
Sbjct: 61  VKRSISYLLAKGGWLMLLSTIVASFGVLLVTIDGPHEKHVEELLKYFQFGLWWVALGVAS 120

Query: 121 SIGLGMCIH 130
           SIGLG  +H
Sbjct: 121 SIGLGSGLH 128
[Close]
BLAST of Spo08376.1 vs. NCBI nr
Match: gi|596141340|ref|XP_007222446.1| (hypothetical protein PRUPE_ppa006162mg [Prunus persica])

HSP 1 Score: 157.9 bits (398), Expect = 1.200e-35
Identity = 88/129 (68.22%), Postives = 101/129 (78.29%), Query Frame = 1 

		  

Query: 1   MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY 60
           MGSRK++ NSS+SS  SSS+ +  SISGL EKHQ ELE LTLTT P RTLKFF  AV  Y
Sbjct: 1   MGSRKQA-NSSSSSPPSSSQRTEISISGLSEKHQEELENLTLTTQPFRTLKFFILAVVQY 60

Query: 61  VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS 120
           VK+SISYLL KGGWL++ ST+V   GILL TI+G HEKHV+E L+Y QF LWW ALGVAS
Sbjct: 61  VKRSISYLLAKGGWLMLLSTVVASLGILLVTIDGPHEKHVEELLKYFQFGLWWVALGVAS 120

Query: 121 SIGLGMCIH 130
           SIGLG  +H
Sbjct: 121 SIGLGSGLH 128
[Close]
BLAST of Spo08376.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1C4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_123360 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.600e-61
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 1 

		  

Query: 1   MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY 60
           MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY
Sbjct: 1   MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY 60

Query: 61  VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS 120
           VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS
Sbjct: 61  VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS 120

Query: 121 SIGLGMCIH 130
           SIGLG  +H
Sbjct: 121 SIGLGSGLH 129
[Close]
BLAST of Spo08376.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B335_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_008510 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.300e-46
Identity = 101/129 (78.29%), Postives = 112/129 (86.82%), Query Frame = 1 

		  

Query: 1   MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY 60
           MGS+KK SNSSNSSAASSS+D NSSI  LREKHQHELETLTLT  P +TLKFF  A++ Y
Sbjct: 1   MGSKKKPSNSSNSSAASSSKDPNSSIPRLREKHQHELETLTLTAQPFKTLKFFVLALYGY 60

Query: 61  VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS 120
           VKQS +YLLEKGGWLLV+STLV+ CG+L ATIEG HEKHVQE LRY+QFVLWWTALGVAS
Sbjct: 61  VKQSFAYLLEKGGWLLVFSTLVISCGVLSATIEGPHEKHVQEVLRYIQFVLWWTALGVAS 120

Query: 121 SIGLGMCIH 130
           SIGLG  +H
Sbjct: 121 SIGLGSGLH 129
[Close]
BLAST of Spo08376.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EPN5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171120 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.500e-40
Identity = 79/102 (77.45%), Postives = 91/102 (89.22%), Query Frame = 1 

		  

Query: 28  GLREKHQHELETLTLTTHPCRTLKFFAFAVFDYVKQSISYLLEKGGWLLVWSTLVMLCGI 87
           G+ EKHQHEL++LTLTT PC TLKFF FA++DYVKQS+SYLL KGGWLLV+S+LVM CG+
Sbjct: 33  GVNEKHQHELKSLTLTTKPCTTLKFFVFAMYDYVKQSVSYLLAKGGWLLVFSSLVMSCGV 92

Query: 88  LLATIEGSHEKHVQEALRYLQFVLWWTALGVASSIGLGMCIH 130
           LLATIEGSH KH +E LRY+QFVLWWTALGVASSIGLG  +H
Sbjct: 93  LLATIEGSHGKHAEEVLRYIQFVLWWTALGVASSIGLGSGLH 134
[Close]
BLAST of Spo08376.1 vs. UniProtKB/TrEMBL
Match: M5XWS1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006162mg PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.200e-36
Identity = 88/129 (68.22%), Postives = 101/129 (78.29%), Query Frame = 1 

		  

Query: 1   MGSRKKSSNSSNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDY 60
           MGSRK++ NSS+SS  SSS+ +  SISGL EKHQ ELE LTLTT P RTLKFF  AV  Y
Sbjct: 1   MGSRKQA-NSSSSSPPSSSQRTEISISGLSEKHQEELENLTLTTQPFRTLKFFILAVVQY 60

Query: 61  VKQSISYLLEKGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVAS 120
           VK+SISYLL KGGWL++ ST+V   GILL TI+G HEKHV+E L+Y QF LWW ALGVAS
Sbjct: 61  VKRSISYLLAKGGWLMLLSTVVASLGILLVTIDGPHEKHVEELLKYFQFGLWWVALGVAS 120

Query: 121 SIGLGMCIH 130
           SIGLG  +H
Sbjct: 121 SIGLGSGLH 128
[Close]
BLAST of Spo08376.1 vs. UniProtKB/TrEMBL
Match: A0A061EKU9_THECC (SNARE associated Golgi protein family isoform 3 OS=Theobroma cacao GN=TCM_020587 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.600e-31
Identity = 73/119 (61.34%), Postives = 89/119 (74.79%), Query Frame = 1 

		  

Query: 11  SNSSAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDYVKQSISYLLE 70
           S   A SSS+  ++SI  LRE+HQ ELE LTLTT P +TL+ F  A+F Y K+S+ YLL 
Sbjct: 3   SGKGATSSSQQMDTSIEDLRERHQQELEHLTLTTQPFKTLRLFILAIFQYFKRSVLYLLA 62

Query: 71  KGGWLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVASSIGLGMCIH 130
           KGGWL++ STL+   GILL TIEG HEKHV+E  RY++F LWWTALGVASSIGLG  +H
Sbjct: 63  KGGWLMLLSTLIAAFGILLVTIEGPHEKHVEEVSRYVRFGLWWTALGVASSIGLGSGLH 121
[Close]
BLAST of Spo08376.1 vs. ExPASy Swiss-Prot
Match: KMS1_ARATH (Vacuole membrane protein KMS1 OS=Arabidopsis thaliana GN=KMS1 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.300e-29
Identity = 64/116 (55.17%), Postives = 84/116 (72.41%), Query Frame = 1 

		  

Query: 14  SAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDYVKQSISYLLEKGG 73
           SA  +S  S+ +IS LREKH+ E+E LTLTT P  TLK F  A   Y+K+SISYLL  GG
Sbjct: 3   SAGVASSSSDVAISALREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGG 62

Query: 74  WLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVASSIGLGMCIH 130
           W ++ +TL+++ G LL T++G H KHV+E L Y+++ LWW ALGVASSIGLG  +H
Sbjct: 63  WFILITTLLVVSGGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLH 118
[Close]
BLAST of Spo08376.1 vs. ExPASy Swiss-Prot
Match: KMS2_ARATH (Vacuole membrane protein KMS2 OS=Arabidopsis thaliana GN=KMS2 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.500e-25
Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 1 

		  

Query: 25  SISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDYVKQSISYLLEKGGWLLVWSTLVML 84
           +ISGLREKHQ +LE LTLT+ P +TL+ F  AVF YV++  SYLL   GWL+++ ++ + 
Sbjct: 13  AISGLREKHQQDLEKLTLTSQPFKTLRLFVVAVFLYVRRWSSYLLANVGWLILFCSIFVA 72

Query: 85  CGILLATIEGSHEKHVQEALRYLQFVLWWTALGVASSIGLGMCIH 130
              LL T++G H KHV+E   Y +F LWW  LGVASSIGLG  +H
Sbjct: 73  FAALLVTLDGPHVKHVEELSEYTRFGLWWIFLGVASSIGLGSGLH 117
[Close]
BLAST of Spo08376.1 vs. TAIR (Arabidopsis)
Match: AT4G14950.1 (SNARE associated Golgi protein family)

HSP 1 Score: 128.3 bits (321), Expect = 3.500e-30
Identity = 64/116 (55.17%), Postives = 84/116 (72.41%), Query Frame = 1 

		  

Query: 14  SAASSSRDSNSSISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDYVKQSISYLLEKGG 73
           SA  +S  S+ +IS LREKH+ E+E LTLTT P  TLK F  A   Y+K+SISYLL  GG
Sbjct: 3   SAGVASSSSDVAISALREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGG 62

Query: 74  WLLVWSTLVMLCGILLATIEGSHEKHVQEALRYLQFVLWWTALGVASSIGLGMCIH 130
           W ++ +TL+++ G LL T++G H KHV+E L Y+++ LWW ALGVASSIGLG  +H
Sbjct: 63  WFILITTLLVVSGGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLH 118
[Close]
BLAST of Spo08376.1 vs. TAIR (Arabidopsis)
Match: AT1G05360.1 (BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G14950.1))

HSP 1 Score: 115.2 bits (287), Expect = 3.100e-26
Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 1 

		  

Query: 25  SISGLREKHQHELETLTLTTHPCRTLKFFAFAVFDYVKQSISYLLEKGGWLLVWSTLVML 84
           +ISGLREKHQ +LE LTLT+ P +TL+ F  AVF YV++  SYLL   GWL+++ ++ + 
Sbjct: 13  AISGLREKHQQDLEKLTLTSQPFKTLRLFVVAVFLYVRRWSSYLLANVGWLILFCSIFVA 72

Query: 85  CGILLATIEGSHEKHVQEALRYLQFVLWWTALGVASSIGLGMCIH 130
              LL T++G H KHV+E   Y +F LWW  LGVASSIGLG  +H
Sbjct: 73  FAALLVTLDGPHVKHVEELSEYTRFGLWWIFLGVASSIGLGSGLH 117
The following BLAST results are available for this feature:
BLAST of Spo08376.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902195013|gb|KNA12724.1|8.1e-6197.6hypothetical protein SOVF_1233... [more]
gi|731375909|ref|XP_010667401.1|1.9e-4678.2PREDICTED: vacuole membrane pr... [more]
gi|731348322|ref|XP_010685438.1|7.9e-4077.4PREDICTED: vacuole membrane pr... [more]
gi|645236009|ref|XP_008224532.1|6.9e-3667.4PREDICTED: vacuole membrane pr... [more]
gi|596141340|ref|XP_007222446.1|1.2e-3568.2hypothetical protein PRUPE_ppa... [more]
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BLAST of Spo08376.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R1C4_SPIOL5.6e-6197.6Uncharacterized protein OS=Spi... [more]
A0A0J8B335_BETVU1.3e-4678.2Uncharacterized protein OS=Bet... [more]
A0A0J8EPN5_BETVU5.5e-4077.4Uncharacterized protein OS=Bet... [more]
M5XWS1_PRUPE8.2e-3668.2Uncharacterized protein OS=Pru... [more]
A0A061EKU9_THECC1.6e-3161.3SNARE associated Golgi protein... [more]
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BLAST of Spo08376.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
KMS1_ARATH6.3e-2955.1Vacuole membrane protein KMS1 ... [more]
KMS2_ARATH5.5e-2553.3Vacuole membrane protein KMS2 ... [more]
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BLAST of Spo08376.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G14950.13.5e-3055.1SNARE associated Golgi protein... [more]
AT1G05360.13.1e-2653.3BEST Arabidopsis thaliana prot... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10281MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATEDcoord: 15..125
score: 6.9
NoneNo IPR availablePANTHERPTHR10281:SF1VACUOLE MEMBRANE PROTEIN 1coord: 15..125
score: 6.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006810 transport
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0044238 primary metabolic process
biological_process GO:0010467 gene expression
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007064 mitotic sister chromatid cohesion
biological_process GO:0006281 DNA repair
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006468 protein phosphorylation
biological_process GO:0008152 metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0006812 cation transport
cellular_component GO:0005777 peroxisome
cellular_component GO:0008278 cohesin complex
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0009507 chloroplast
cellular_component GO:0005768 endosome
cellular_component GO:0016471 vacuolar proton-transporting V-type ATPase complex
cellular_component GO:0005622 intracellular
cellular_component GO:0005634 nucleus
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0042802 identical protein binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008324 cation transmembrane transporter activity
molecular_function GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
molecular_function GO:0016853 isomerase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo208520.74Barchart | Table
Spo226590.73Barchart | Table
Spo254050.72Barchart | Table
Spo052350.72Barchart | Table
Spo011040.70Barchart | Table
Spo031910.70Barchart | Table
Spo034060.70Barchart | Table
Spo034160.70Barchart | Table
Spo255730.70Barchart | Table
Spo074150.70Barchart | Table
Spo236260.70Barchart | Table
Spo266400.69Barchart | Table
Spo085110.69Barchart | Table
Spo220860.69Barchart | Table
Spo038650.68Barchart | Table
Spo176770.68Barchart | Table
Spo086030.68Barchart | Table
Spo096710.68Barchart | Table
Spo099480.68Barchart | Table
Spo189610.68Barchart | Table
Spo104910.68Barchart | Table
Spo039500.68Barchart | Table
Spo218330.67Barchart | Table
Spo007830.67Barchart | Table
Spo175640.67Barchart | Table
Spo131610.67Barchart | Table
Spo181300.67Barchart | Table
Spo089820.67Barchart | Table
Spo020130.67Barchart | Table
Spo103990.67Barchart | Table
Spo206090.66Barchart | Table
Spo017060.66Barchart | Table
Spo021770.66Barchart | Table
Spo072450.66Barchart | Table
Spo101640.66Barchart | Table
Spo126160.66Barchart | Table
Spo142730.66Barchart | Table
Spo187280.66Barchart | Table
Spo200730.66Barchart | Table
Spo003890.66Barchart | Table
Spo209900.66Barchart | Table
Spo211440.66Barchart | Table
Spo250080.66Barchart | Table
Spo047340.65Barchart | Table
Spo256330.65Barchart | Table
Spo162400.65Barchart | Table
Spo148260.65Barchart | Table
Spo109650.65Barchart | Table
Spo233480.65Barchart | Table
Spo093500.65Barchart | Table
Spo240650.65Barchart | Table
Spo189430.65Barchart | Table
Spo193720.65Barchart | Table
Spo015900.65Barchart | Table
Spo078020.65Barchart | Table
Spo182850.65Barchart | Table