Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGCGGTTCATCAGATCTCATCTCCCCAAGAACCCTAAACTTAACTTTTCATTCACAATTAGATCCCCCGTCGAAAATTTTAAGGGTTCCTTTCAATCCAAAATTGCCGAGTTTCCTTCAATCCGAAATTTGTCGAGTTCATTTGCGGTTTTGCGGTTTTGTGGTTTCGCGGTTCTTCTTGTTAAGCTGTTCTGAAATTTGCGTTTTACAGGTTTATTAATTAGGAATTTGCGATTTGAAAGTGTGAATTGCAGTTTAATTGCGATATACTGGTTTACTTTTGTTGAATTTGGTGTTCTTTTCCCATGATTTATAAATTTTGATAAGTTTATTCGATGATTTTAGTTGAAGATCTAACTTGATCTATTTTGATTTTTGTTGGTTTTAAGGGGATGCAGTCCAAGAGAATTTTGAAGGAGCTCAAGGAGAAAGATCCTCCTACTTCTCGGACTCATGGTATAATACATTAACAATCTTGTAAAATAGCGTTTTTATGGAAGCTGTGAATTTGATTAAAAAAAATTAATATATACTTCATATTTGCCTGCATTGCTGATAATTTTGGGTTATGATTCCCAAACTTATGGTCTCTAGAGGTTCGGTTTACTAATTAGGGCCCTCATTCTTGGTGTGCTCCTCCTGAATTTGTAGTGAAGGTTGGATAGGTTGGTTTTGGTATAGCTTTAATGTTATTAACCAGAGTATTATTGTCTGTAGATTTAACTATTTAAGCTACCGTGTAGACATTGCTTTTATGAACTTTTTCCATGCTTCAAGAAGTAGCTTTCTAGCTGAATTTGGTTTTTTTTCTTCTTATTATTGCAAGTCCTGAGTCTGTTGGGTCATACTGTCGCACAATCATGTTCAAACCTTAAGTTGATCTGATTCATCCTCTAGATAGAATAATTCTGATAGATGATGTTGCTTCCAATTCTGTATTCTGGCAGAGATGAAATTATTGAGTGGGATAAGGAAGTTAAACAGCTAGGTAAGACACTCTTAAGGCTATTCTCTCAAAGATTGGGAGTGGAGGCAGTTGATCGAAAGAGATGTCATGTTCAGGAGGCAGAGTTATGGTTGGCCATTGTTATCCATATTGTCCCGAGCCCAACAAGACAGGTGGGATCGCGTCCCATACTGATCCTGGCGTTCTCACAGTGTTGCTGCAGAATCAATTTGGTGGGTTGCAAGTTAAACATGAGGGGAAATGGGTTAATGTCAAGCAATCCAAGGTGCACTTATTATCAATGTTGGCAACTTGCTTCAGGTATCAAAGACATATTCCTATATTTCTCTTATATAACTAGTTTCAGTGTTTCAGTTTGTTAAAGCTGATTGGCCCGGTTTTATATTCAACTCCTCTCGAATGATAAGTACACGAGTGTAGAACACTAAGTGTATGCTAATCCTTAGCATGAACCACAGGTCTCAATTGCTTTGTTCTTCAACTGTAGCATGAGGGAGAACTTGTATGGATCGATACCTGCACTACACAACCATCGGATTATTCTAATGAGGAGTTGGAGCATGAGCTCTTTCTTGCTTCCTCGGTGCAATATTTCAACCAAGGTATTAATTTACAAATGATTCTAGTTTGTTAAACTTGATTTCCCCATAACAATGAAGAATAAAGTGTCTTGATCTTTAAAGATTGAGGGTTATGTGCAATTTATGAGTATAATATCTATCCTGTATGAAACACAGATATTTCCCTCCCCAATATGTGTATAGTTTTTTCCCTGTATATAGTCACTGCTCAGGTTCTGAGACTTTAAACACCAGGTTCATGTTTATAGGAGGAGGCTGGATTAACAGAAATTATTCAAATAAAAAACAATTAGAAAGAGAGTGAAAAGTACATTTTCAGAAGACATAAGGAGGAGAGACAGAAAGAGTAGGCTGCAGAGAGTAGGGAGTACTATGGTGTGCATAACCCTACATACAGCATAATAGGACTTATCAGGAAATAGATAAAAAATTGAGAAAGAGTTACGGATTTCCGACTAGCTAGTGTTGATGTGACATTGATAGGGTCTGATAGTGTATGGATCAAATGTATTACTGTAGTTTGTAATCTATCTATACATTATGAGATGGTAAGAATTTTGAAATGGTAAGAATTTTTGACTGAAAACTAAACCTTTGTAATTTTTCTAATCTACCATACAAACTTGTGATGTTTGAGTTTATGGCCTCTTACTTTCTATATTAAGCACTTAGCTCCTTCCATTTTAATGCGGAAATCAGGCATGCTTTTAGCATATGTGGTTGAAGAATTTTGAGCTACTTCTTCATAGTAGTATACAAGTTTGTTGTCCGTCTATCACAAAGTACCTTTTAAGATACCGGTTGATATTCCAGGAATCAAGGATAAGGATACTGAATTAGTGTTGGCTTGACTCTTGGAGGTCTTCCACTTTATTTTTCTTCTAATATTCCAAATATATCTTTGATTGCCTCATAGCGTGACACTGATGATTCAGTTGACTGACTTTCAAGAGTAAACATCTCTTCCCTATAGATGTATTTCTTTGTAAAATAGCTTATTGTGATGGGACTAAGTGGACTTTGATTATACTTCTACTAGCCAAGTCCTTTTGCCCGCCAATATTCTTTTCCATCCACCCTTTTTCTTGCCATCCATGAATTTGGCATCAGCATTTCTAGTAGTAGAGGCCACAACTGGGTTTGACCTTAATTCCCTCGTTTGTTCCTCTGTTGAATGATACTCTTATTTTCTCCTCTAACTCTTCTCCTTACGTATTTATGGATTAGTCATGTATTCAGAAAACCTTGATGAGACAGAAGACTAATAGGCTCAATAGCAAATCCTTTATTTCCATCTTTTCACATAACTCATATTCTTAGCATTGTACTTCGTATATATTTTTGCATAGCAGGTAGGCAGGTAGCTTTACAAAACTAGTATGTGTTAATTGATCAACTATTTAAGAACCGAAGAATTTGACGTCTGGCTTAAATTTTACTTAGCAAAGGGATTTAGCTGTTTAAAATCCCTTGTCTTTACTTCATGTAAATTCTATCTATTGTTTGCAACAACTCTGTGTTTTGTCTGATGAGGGACGAGTTGTTGAGGTTGCTCAAAAGCGGTGGAGAATTGAGATAAATTCAAACCAAGATGAGGTTCTAATGCTTTCTTCAGTGACATTGCCTGATGGCATCCAGGTTCATTGTATGGAGTATATTTTTCTTAATTGCTTTTCATGTTTTCGGTGTCCGCACAATTTCTCCATGTTGGATATTGTTACTTGGAATTTCTCATGCACCTTCTATTGAAGTAGGAGTATCTGAATTTTGTGTTTTGAACTGTAGGCAGTATTTAGTTAAAACTCTTTCTGCTTATAGCCTTCCAGGATGGTGATTGTTTATTTATTCGTCTTATTTCTATTAACAATTTAGTGGGATTGATTACTTCTACTTTGTTTTCTCAATACTTTACTTTTTCATCATGTTGCTCAATAAGGTCAACCGTCAGTGCACTATCCAATATCTTAAGTTCAGGTATTAAGTTCCTGGTACTGATTTGTGATGTCCTAGCCTTAAAGTTCTTGGGAATTGACCTGGTTCCCTTAACTATGACTCTAGGTATAGAAAACCGAAAACTAGAAATGTGAAAATTACACCTTGCTTTTGGGTCAATTGGAAACAACCTCTCTGCAAATGCAGGGGTAAGGTTGCGTGCACCCGACCCCCCCTTCTCGCGGGAGCCTCTTTGAGGCAATGGGGTAATGATAATGATGATGATAATGGATGTTCATATTTGCCTTTCTAATAATAATAATGGGCTGTACTTTTGTTGATTTGGTAAATAAAATATCTGGTATGTTTGGGCCGTTTCTCTAGCTCTTATTTTTCTTGAACAAAGATACATGTTTGCATAGCTCTTTTTTGTTTTTGAAGTGAAATAGGATTGATTAAAATGAGCACTAAGTGGATACAAATACAAGTATGTCTTTTGATTATGTTTATTAAAATTTTTATTTTTTTTGAATAGTATTCATAAATAATTGATTTATTTTTCTTGTGCATTGTCCTCTGCAAAAGAATGTCATGGATTCTGGATATTATGTCACGAGATTCATGTAAGAGATCATCGACCATAAGCAAACTTGAATATTTGAAGATGTATGTATTTTTCTTTCTTCAATTATGCCTAGACTTTATATGTATTGTTACTAAGTATTTGAACTTTCTCATTTTGTAGTACTTTCATGATTGCAATGTTCCGAATTATGATCAAGAACAAATTGATGAAGTCAGAGCTCAAGGATGCGTCATGATCCTTGTGAATATTATGGTGTATTAATTATGTTTTTCGACTGGAAATTGTCTACAGCTTTCTAATTTTAGTATGTTGATTTGAAATTAAAAGAAGGATTATGTGACACATATACTTTTTTTTCTACTGTGTTTAATTAGGCAAAATTGTATATGATTTTAAGTTATAAGACATGAGACGTTTATTTGATATGATAGAAATGAAATGGGATGTTATATATATTCAATTTTTTTTGTGGGGAGCTACCTACATATTCAACTCTTACATTACCGCTTTAAAATGGTTTTTTTTATTATTTTATTACAGGTATTTAATAATGAATAG ATGTACGCGGGGATGCAGTCCAAGAGAATTTTGAAGGAGCTCAAGGAGAAAGATCCTCCTACTTCTCGGACTCATGGAGGCAGAGTTATGGTTGGCCATTGTTATCCATATTGTCCCGAGCCCAACAAGACAGGTGGGATCGCGTCCCATACTGATCCTGGCGTTCTCACAGTGTTGCTGCAGAATCAATTTGGTGGGTTGCAAGTTAAACATGAGGGGAAATGGGTTAATGTCAAGCAATCCAAGCATGAGGGAGAACTTGTATGGATCGATACCTGCACTACACAACCATCGGATTATTCTAATGAGGAGTTGGAGCATGAGCTCTTTCTTGCTTCCTCGGTGCAATATTTCAACCAAGGTAGGCAGGGACGAGTTGTTGAGGTTGCTCAAAAGCGGTGGAGAATTGAGATAAATTCAAACCAAGATGAGGTTCTAATGCTTTCTTCAGTGACATTGCCTGATGGCATCCAGGTATTTAATAATGAATAG ATGTACGCGGGGATGCAGTCCAAGAGAATTTTGAAGGAGCTCAAGGAGAAAGATCCTCCTACTTCTCGGACTCATGGAGGCAGAGTTATGGTTGGCCATTGTTATCCATATTGTCCCGAGCCCAACAAGACAGGTGGGATCGCGTCCCATACTGATCCTGGCGTTCTCACAGTGTTGCTGCAGAATCAATTTGGTGGGTTGCAAGTTAAACATGAGGGGAAATGGGTTAATGTCAAGCAATCCAAGCATGAGGGAGAACTTGTATGGATCGATACCTGCACTACACAACCATCGGATTATTCTAATGAGGAGTTGGAGCATGAGCTCTTTCTTGCTTCCTCGGTGCAATATTTCAACCAAGGTAGGCAGGGACGAGTTGTTGAGGTTGCTCAAAAGCGGTGGAGAATTGAGATAAATTCAAACCAAGATGAGGTTCTAATGCTTTCTTCAGTGACATTGCCTGATGGCATCCAGGTATTTAATAATGAATAG MYAGMQSKRILKELKEKDPPTSRTHGGRVMVGHCYPYCPEPNKTGGIASHTDPGVLTVLLQNQFGGLQVKHEGKWVNVKQSKHEGELVWIDTCTTQPSDYSNEELEHELFLASSVQYFNQGRQGRVVEVAQKRWRIEINSNQDEVLMLSSVTLPDGIQVFNNE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08382.1 vs. NCBI nr
Match: gi|902088462|gb|KNA03274.1| (hypothetical protein SOVF_210750 [Spinacia oleracea]) HSP 1 Score: 128.6 bits (322), Expect = 9.700e-27 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1
BLAST of Spo08382.1 vs. NCBI nr
Match: gi|902237995|gb|KNA25000.1| (hypothetical protein SOVF_010500 [Spinacia oleracea]) HSP 1 Score: 109.8 bits (273), Expect = 4.600e-21 Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 1
BLAST of Spo08382.1 vs. NCBI nr
Match: gi|731361299|ref|XP_010692279.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 105.5 bits (262), Expect = 8.800e-20 Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 1
BLAST of Spo08382.1 vs. NCBI nr
Match: gi|870847771|gb|KMT00119.1| (hypothetical protein BVRB_1g019420 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 102.8 bits (255), Expect = 5.700e-19 Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 1
BLAST of Spo08382.1 vs. NCBI nr
Match: gi|731361633|ref|XP_010692464.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 102.8 bits (255), Expect = 5.700e-19 Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 1
BLAST of Spo08382.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7R4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_210750 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 6.700e-27 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1
BLAST of Spo08382.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZS0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_010500 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.200e-21 Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 1
BLAST of Spo08382.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJ89_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g019410 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 6.100e-20 Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 1
BLAST of Spo08382.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJ88_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g019420 PE=3 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.000e-19 Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 1
BLAST of Spo08382.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1E5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_010540 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.400e-16 Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 1
BLAST of Spo08382.1 vs. ExPASy Swiss-Prot
Match: ACCH9_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.200e-10 Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 1
BLAST of Spo08382.1 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 2.800e-10 Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 1
BLAST of Spo08382.1 vs. ExPASy Swiss-Prot
Match: ACH10_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 10 OS=Arabidopsis thaliana GN=At5g43450 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.800e-10 Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 1
BLAST of Spo08382.1 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.700e-10 Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 1
BLAST of Spo08382.1 vs. ExPASy Swiss-Prot
Match: ACH11_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.400e-9 Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1
BLAST of Spo08382.1 vs. TAIR (Arabidopsis)
Match: AT2G30830.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 4.200e-12 Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 1
BLAST of Spo08382.1 vs. TAIR (Arabidopsis)
Match: AT5G43440.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 67.0 bits (162), Expect = 1.200e-11 Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 1
BLAST of Spo08382.1 vs. TAIR (Arabidopsis)
Match: AT5G43450.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 66.6 bits (161), Expect = 1.600e-11 Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 1
BLAST of Spo08382.1 vs. TAIR (Arabidopsis)
Match: AT2G25450.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 66.2 bits (160), Expect = 2.100e-11 Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 1
BLAST of Spo08382.1 vs. TAIR (Arabidopsis)
Match: AT2G30840.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 63.9 bits (154), Expect = 1.000e-10 Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08382.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08382.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08382.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08382.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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