Spo08403 (gene)

Overview
NameSpo08403
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHAT family dimerisation domain containing protein, expressed
LocationSpoScf_01684 : 40129 .. 44218 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAATTTGTTATTAAAAAAAATAATTCTCAAGAAAATTGTAGTGGTACTTTTAATGGGGATCAGTTGACTGCAAACTTAGATCATGAAAATTATATTAGTGATCACGAGCCTAATGTTGTTCCTAATGTGTCTATTGATGTGCCAAATGTGTCGAATGATGTGCCAATTGAGCCTAATGAAGTGCCAATTGAGCACAATGAAAATCCCAATGTCGGTGAAGATGAAACTATCCCTGACATTTATGATCCTGCAAATTGGGATAATTTGGATCACAAGGAAAGAGACATCTTAGTTGAGAAAGGGCCTCCTGTAAGAGAACTTAATCTTAACTTCCCTTTAGATAATCTCAATAGGCATTTTTCGTGTTCTTTTTACTCTAAAAAGTTAAACAATGGTGAGATTATTGATAGAAAATGGTTGGTTTATTCCAAACATGTAGACAAAGTTTATTGCTTCTGTTGCAAATTGTTTAAATCTGATATTAACAGAAGTTTGTTAGCAAATGTCGGGTTTAGAGATTGGAAGCATATTAGTGAAAGACTTAAGCAACACGAGAATAGCACTGAACATATGACTAACATGAATACTTGGAATGAGTTGAGAGTAAGATTCGACAAAAATCAAACAATTGATAAAAATTTACAACAACAGGTTATGAAAGAGAAAGAACGTTGGAGACAAGTTTTACGTAGAATCCATTCTGTTGTGAAATTTCTTGCTAAGAACAATCTTGCTTTTCGCGGATCTAATGAGAAACTATATCAAGATAGCAATGGGATATTTTTGGGAACGGTTGAAATGATTGCGGAGTTTGATTTGGTAATGCAAGAACATATTAGACGCATTAAAAGTCAGGAAATTCATTATCATTATCTTGGCCATAAAATTCAAAATGAGTTCATCTCACTGTTAGCCCAAAATGTGAAAAATTCCATAATAAAGATAATAAAAGAAGCCAAGTATTTTTCTATTATTCTTGATTGTACCCCCGATACGAGTAATCAAGAACAAATGACTTTAATAATACGATGTGTGAATATGTCAAGTCAAAACATAAAAATAGAAGAGTACTTTCTTGAGTTTCTAAAGGTGGATGATACAAGTGGGTTGGGACTCTTTAATGAACTACTTGATGTTTTGAAATGTTTAAATCTATGTGTTGATGATGTGAGGGGTCAAGGCTATGATAATGGTTCAAATATGAAAGGTAAGCATCAAGGAGTTCAAAAGAGGTTACTTGAAATAAATCCGAGAGCCTTATATATGCCATGTGCTTGTCATAGCCTTAATCTCACTCGTAGTGATATGGCACATTCTTGTACTAAAGCTATTTCATTTTTTGGGATTGTTCAACGTATGTATTGTTTATTTTCAAGTTCTACAAAAAGATGGAAAACTTTCCTTGATTTTGTTCCCGGTTTGACTGTGAAATCTTTGTCTAATACTCGTTGGGAGAGTCGCGTTAAAAGTGTCAAACCTATTAGATTTCAAGCTCCTCAACTAAGGTTGGCTTTGTTGGAATTATCTGAAACTTGTGGTAAAGATGCCAAGGCAAAAAGTGAAGCAGAAAGTATGATTAATGCACTTCAAAGTTTTGAGTTTTTATTTGGTATGGTTATTTGGTATGAAGTTTTATTTACTATTAACATGGTGAGTAAAAAGTTACAATCTAAGTCCATGTGCATCGACGTTACTATTAAGCAAGTACAAGGTATACTGTCATATTTTGAAAACTATAGAGATAAAGGTTTTGAATCTTGTATGATAGTTGCTAAAACTGTTGCTTTTGATATGAATGTAGAGCCTATCCTTCCAACTAGACGGCTTATTACTAGGAAGAAGCAATTTGATGAGCATGATCATGATGAGGAAATTATGTCACCAGAAGAGTCATTTCGAATTAACTATTTTTTGGTTGTTGTGGATATGGCTATTAGTTCTTTGAAAAGTAGATTTGAGCAACTAAAGATTTTCGAAAGTATATTTGGGTTTTTATGCGATTCAAATAAGCTAAAGTCTTTAGATGAAATTCATTTAAGAAAATGTTGAGAAAACCTGTACTCTACGTTTTCTCATGGTGATGTATCAGATTTTGATTTAAATGATCTTTTCTCCGAATTAAAAGTGTTACAAGTAACATTGCCAAACGAATTACTATCATCCATTGAAATTCTTGAATTTGTCAAAGCCATAGATTGTTATCCAAATGTTTCTGTAGCTTATAGAATTTTATTAACAGTACCTATGACTGTAGCATCTGCCGAGAGAAGTTTTTCAAAATTAAAATTAATAAAGACTTACTTGAGATCATCAATGTCGCAGGAAAGATTAAGTGGATTAGCAATTTTATCTATCGAGAAAGACATATTGGAAAACATTGATGCTGATGATATTATTAATGATTTTGCATCTCGAAATGCTAGAAGAAATCGTCTAATTTAATTTTTTGTGTTTTTGGTTTTGAAGTTGGCGGGATAAATGAGGGCAAACCGAAGGATGAACACTGAAGTGGCTAGTGACTTTAGCAAAAAGGGCCCCAACTTGACATCTCGCCCCGGGCCCTCAAAAAGTCAGGACCGGGCCTGGTGTGTGGTTGGCTGGTTTCTTGGTTACCTAGAAAGGTGGGAACTTCTTCATATCTCCCGTAATTTATAAACAAACCCAAAATAAATAAGAACATTTTTCTGTCAAACAACAACCTTTTTGTATCTACACCAAACTACCTTAGCAATTAGCATCCCGCCCTAAGCGGGGTATATGGTATGATTTCAGGTGGTTTTAAATTTTCTGATGTGCACTGTAAGTCTGTGACATAGTCTTAAGCTCTAAACTCATAGTTTCTGAAATCTCTGCAAGAGAAAATGTTTGTATGAGAGCAATGGTAGTTGATTTAGCAGGAAAAATTTAGTGGGAACAACTGACCAATTGAATTTGCAGTGGCTGATAAGATGACAAGGGAATGAGGGTAACTGAAAGCTGAACTGAAAATAAATAGATCATAAGGTTGACTTAGTTGTGTTGGTTTCAGTCAGTATGCTCTTGTTGGCTGTTGACCTTAGCTAGGTGATTAGGTGGCTGTTGAAAGCTTTGCCACCTAGCAGGCAAGTCATGCTTAAGAATCTGCAGATTATAAACTAATCAGCTTCCATAAAATAGAAAGTACAAATGGGAGGAACCATTCAATCTCCATCCTAGATAATTTCCAATAAAATGAAACCCCACTCATATTAAAATTCTTTTCCAGCAACAGAACTGACAAACAAAAGATAATGAAGGGATTTACGAACTAAAACACAAGACTAAGGGGTTACGGAAAAAAGTCATGTTAAAAGCGATCACCCTAAACATGATAAGGATCTTATGAAAGAGAAATTCTTTAAGCAACCACCACCCAAATATCTATTCCAATGTACGTTGTTAGTCAGAACAACAACAACTCATTAACTCAGTGCACTCTCTAAAATATTCACCACAGTAGATATTATAAGCCTTCTTGTTGCATCAGTGTGCATGCATCATTTTGTTAGCTTCATCATCTTCTCTAATTCTTCGCCATTTTTCTACACATCATCGCTGCATATGTCTATCAGGTCTAGCAGAAGCTAGTTAAAATGAGTGTTCCCATGCTCATAACCTTTAGTGTTAAATAATTCAGGTTTTTATATGTTGGCCATATGTTAATATTAGAAATTTAACCTTATGTTTTTTTTGTTCTATTCAATTTCAGTAGCCTTTTGTTGCTAGCTCGTCATACATAGGAGGTGATGCAGCATTCTTATCATAAGCAGTCCTTCTCTCGAATTCTTGTATTGCCATGCCTTTGATGCTAACAGAATCTTCAAAGTTTCCTGATGTATTTCTGTCAGAAAAATAGGGTAAACATTCTTCAGACTTCGCATCTGCAACAAGATAAGAGAGTAAGATTTCATGAAACAAGCCTTTACTAAACTCATATTAAGACTTAAAAGTCGAATAAGCCTTTAATTCTAGTTGATTACCTTCTTTGAGTGAGTCAAGATATTTCTTGAGTAATCCCAACTCCGTTCTTGCAAACAGTTGAATAGTTTGATAACCCAAATCAGAG

mRNA sequence

ATGGATAAATTTGTTATTAAAAAAAATAATTCTCAAGAAAATTGTAGTGGTACTTTTAATGGGGATCAGTTGACTGCAAACTTAGATCATGAAAATTATATTAGTGATCACGAGCCTAATGTTGTTCCTAATGTGTCTATTGATGTGCCAAATGTGTCGAATGATGTGCCAATTGAGCCTAATGAAGTGCCAATTGAGCACAATGAAAATCCCAATGTCGGTGAAGATGAAACTATCCCTGACATTTATGATCCTGCAAATTGGGATAATTTGGATCACAAGGAAAGAGACATCTTAGTTGAGAAAGGGCCTCCTGTGGATGATACAAGTGGGTTGGGACTCTTTAATGAACTACTTGATGTTTTGAAATGTTTAAATCTATGTGTTGATGATGTGAGGGGTCAAGGCTATGATAATGGTTCAAATATGAAAGAGCCTATCCTTCCAACTAGACGGCTTATTACTAGGAAGAAGCAATTTGATGAGCATGATCATGATGAGGAAATTATGTCACCAGAAGAGTCATTTCGAATTAACTATTTTTTGGTTGTTGTGGATATGGCTATTAGTTCTTTGAAAAGTAGATTTGAGCAACTAAAGATTTTCGAAATTGGCGGGATAAATGAGGGCAAACCGAAGGATGAACACTGAAGTGGCTAGTGACTTTAGCAAAAAGGGCCCCAACTTGACATCTCGCCCCGGGCCCTCAAAAAGTCAGGACCGGGCCTGGTGTGTGGTTGGCTGGTTTCTTGGTTACCTAGAAAGCCTTTTGTTGCTAGCTCGTCATACATAGGAGGTGATGCAGCATTCTTATCATAAGCAGTCCTTCTCTCGAATTCTTGTATTGCCATGCCTTTGATGCTAACAGAATCTTCAAAGTTTCCTGATGTATTTCTGTCAGAAAAATAGGGTAAACATTCTTCAGACTTCGCATCTGCAACAAGATAAGAGAGTAAGATTTCATGAAACAAGCCTTTACTAAACTCATATTAAGACTTAAAAGTCGAATAAGCCTTTAATTCTAGTTGATTACCTTCTTTGAGTGAGTCAAGATATTTCTTGAGTAATCCCAACTCCGTTCTTGCAAACAGTTGAATAGTTTGATAACCCAAATCAGAG

Coding sequence (CDS)

ATGGATAAATTTGTTATTAAAAAAAATAATTCTCAAGAAAATTGTAGTGGTACTTTTAATGGGGATCAGTTGACTGCAAACTTAGATCATGAAAATTATATTAGTGATCACGAGCCTAATGTTGTTCCTAATGTGTCTATTGATGTGCCAAATGTGTCGAATGATGTGCCAATTGAGCCTAATGAAGTGCCAATTGAGCACAATGAAAATCCCAATGTCGGTGAAGATGAAACTATCCCTGACATTTATGATCCTGCAAATTGGGATAATTTGGATCACAAGGAAAGAGACATCTTAGTTGAGAAAGGGCCTCCTGTGGATGATACAAGTGGGTTGGGACTCTTTAATGAACTACTTGATGTTTTGAAATGTTTAAATCTATGTGTTGATGATGTGAGGGGTCAAGGCTATGATAATGGTTCAAATATGAAAGAGCCTATCCTTCCAACTAGACGGCTTATTACTAGGAAGAAGCAATTTGATGAGCATGATCATGATGAGGAAATTATGTCACCAGAAGAGTCATTTCGAATTAACTATTTTTTGGTTGTTGTGGATATGGCTATTAGTTCTTTGAAAAGTAGATTTGAGCAACTAAAGATTTTCGAAATTGGCGGGATAAATGAGGGCAAACCGAAGGATGAACACTGA

Protein sequence

MDKFVIKKNNSQENCSGTFNGDQLTANLDHENYISDHEPNVVPNVSIDVPNVSNDVPIEPNEVPIEHNENPNVGEDETIPDIYDPANWDNLDHKERDILVEKGPPVDDTSGLGLFNELLDVLKCLNLCVDDVRGQGYDNGSNMKEPILPTRRLITRKKQFDEHDHDEEIMSPEESFRINYFLVVVDMAISSLKSRFEQLKIFEIGGINEGKPKDEH
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08403.1Spo08403.1mRNA


Homology
[Close]
BLAST of Spo08403.1 vs. NCBI nr
Match: gi|1012359324|gb|KYP70508.1| (Zinc finger MYM-type protein 1, partial [Cajanus cajan])

HSP 1 Score: 100.9 bits (250), Expect = 2.900e-18
Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 1 

		  

Query: 60  PNEVPIEHNENPNVGEDETIP--DIYDPANWDNLDHKERDILVE--KGPPVDDTSGLGLF 119
           PN+  IE   N ++ E+++ P  DIY P NW+NLD+K +DIL+E  +   VDDTSGLGLF
Sbjct: 2   PNKFSIE---NFDIKEEQSNPHLDIYHPINWNNLDNKVKDILIEFLEFLKVDDTSGLGLF 61

Query: 120 NELLDVLKCLNLCVDDVRGQGYDNGSNMK 145
           NELL VLK LNL V+DVRGQGYDNGSNMK
Sbjct: 62  NELLVVLKALNLNVNDVRGQGYDNGSNMK 87
[Close]
BLAST of Spo08403.1 vs. NCBI nr
Match: gi|727450960|ref|XP_010507183.1| (PREDICTED: zinc finger MYM-type protein 1-like [Camelina sativa])

HSP 1 Score: 99.8 bits (247), Expect = 6.400e-18
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = 1 

		  

Query: 106 VDDTSGLGLFNELLDVLKCLNLCVDDVRGQG-------YDNGSNMKEPIL---------- 165
           VDDT+GLGLF++LLD LK L L  +++RGQG             +++ +L          
Sbjct: 155 VDDTTGLGLFDKLLDALKSLTLDFENIRGQGYDNGSNMKGKHQGVQKRLLDVNPKALYMP 214

Query: 166 -------------PTRRLITRKKQFDEHDHDEEIMSPEESFRINYFLVVVDMAISSLKSR 204
                        P +R + RKKQFDE   DEEI S E++FR+NYFLVVVDMAI+S+K+R
Sbjct: 215 CACHSLNFVILYFPHKRRVFRKKQFDEIGLDEEIQSSEDAFRVNYFLVVVDMAITSVKTR 274
[Close]
BLAST of Spo08403.1 vs. NCBI nr
Match: gi|731319673|ref|XP_010670398.1| (PREDICTED: zinc finger MYM-type protein 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 99.4 bits (246), Expect = 8.300e-18
Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 1 

		  

Query: 130 DDVRGQGYDNGSNMK---------EPILPTRRLITRKKQFDEHDHDEEIMSPEESFRINY 189
           ++ R +G++N  N           EPILPT+R + RK+QFDE++ DE + SPEESFR+NY
Sbjct: 644 ENYRNEGFENSMNSAKSLAIDMNIEPILPTKRHVFRKRQFDENNQDEAMQSPEESFRVNY 703

Query: 190 FLVVVDMAISSLKSRFEQLKIFE 204
           FLVVVDMAI+SLK RFEQLK+FE
Sbjct: 704 FLVVVDMAIASLKDRFEQLKVFE 726
[Close]
BLAST of Spo08403.1 vs. NCBI nr
Match: gi|731356790|ref|XP_010689867.1| (PREDICTED: zinc finger MYM-type protein 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 92.4 bits (228), Expect = 1.000e-15
Identity = 46/78 (58.97%), Postives = 57/78 (73.08%), Query Frame = 1 

		  

Query: 135 QGYDNGSNMK---------EPILPTRRLITRKKQFDEHDHDEEIMSPEESFRINYFLVVV 194
           +G++N  N           EP LPT+R + RK+QFDE++ DE   SPEESFR+NYFLVVV
Sbjct: 527 EGFENSMNSAKSLAIDMNIEPNLPTKRHVFRKRQFDENNQDEASQSPEESFRVNYFLVVV 586

Query: 195 DMAISSLKSRFEQLKIFE 204
           DMAI+SLK RFEQLK+FE
Sbjct: 587 DMAIASLKDRFEQLKVFE 604
[Close]
BLAST of Spo08403.1 vs. NCBI nr
Match: gi|731341655|ref|XP_010682004.1| (PREDICTED: zinc finger MYM-type protein 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 92.0 bits (227), Expect = 1.300e-15
Identity = 54/153 (35.29%), Postives = 83/153 (54.25%), Query Frame = 1 

		  

Query: 81  DIYDPANWDNLDHKERDILVEKGPPVDDTSGLGLFNELLDVLK-----------CLNLCV 140
           ++YD +  D     E + L       +   G+ ++ E+L  +            C+   +
Sbjct: 532 ELYDSSGDDAKTKSEAESLANSIGSFEFLLGMVIWYEILFAINIVSKKLQSKSMCIGTTM 591

Query: 141 DDVRG----------QGYDNGSNMK---------EPILPTRRLITRKKQFDEHDHDEEIM 200
            +V G          +G+++  N+          EP LPT+R I RK++FDE+D D E+ 
Sbjct: 592 KEVEGIMSYFEKYRIEGFESSMNIAKSLAIDIDIEPTLPTKRRIFRKRRFDENDSDGEMQ 651

Query: 201 SPEESFRINYFLVVVDMAISSLKSRFEQLKIFE 204
           SPEESFR+NYFLVVVDMAI+SL +RFEQL++F+
Sbjct: 652 SPEESFRVNYFLVVVDMAITSLNNRFEQLQVFQ 684
[Close]
BLAST of Spo08403.1 vs. UniProtKB/TrEMBL
Match: A0A151TU32_CAJCA (Zinc finger MYM-type protein 1 (Fragment) OS=Cajanus cajan GN=KK1_009727 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.000e-18
Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 1 

		  

Query: 60  PNEVPIEHNENPNVGEDETIP--DIYDPANWDNLDHKERDILVE--KGPPVDDTSGLGLF 119
           PN+  IE   N ++ E+++ P  DIY P NW+NLD+K +DIL+E  +   VDDTSGLGLF
Sbjct: 2   PNKFSIE---NFDIKEEQSNPHLDIYHPINWNNLDNKVKDILIEFLEFLKVDDTSGLGLF 61

Query: 120 NELLDVLKCLNLCVDDVRGQGYDNGSNMK 145
           NELL VLK LNL V+DVRGQGYDNGSNMK
Sbjct: 62  NELLVVLKALNLNVNDVRGQGYDNGSNMK 87
[Close]
BLAST of Spo08403.1 vs. UniProtKB/TrEMBL
Match: M5W0U5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021879mg PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.900e-13
Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 1 

		  

Query: 145 EPILPTRRLITRKKQFDEHDHDEEIMSPEESFRINYFLVVVDMAISSLKSRFEQLKIFE 204
           +P+ P +R   RK QFDE+DH E   S EESFR+NYFLVVVD AISSL+SRFEQL+IFE
Sbjct: 390 DPVFPKKRQSQRKNQFDENDHKETFQSAEESFRVNYFLVVVDAAISSLRSRFEQLEIFE 448
[Close]
BLAST of Spo08403.1 vs. UniProtKB/TrEMBL
Match: A0A0D2ZUE5_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.800e-11
Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 1 

		  

Query: 81  DIYDPANWDNLDHKERDILVEKGPPVDDTSGLGLFNELLDVLKCLN-------LCVDDV- 140
           ++YD  + D +   E + LV+     +   G+ +++++L  +  ++       +C+D+  
Sbjct: 72  ELYDLCD-DAISKSETESLVDALENFEFLLGIVIWHDILFAINMVSKKLQDKTICIDNAM 131

Query: 141 -------------RGQGYDNGSNMK---------EPILPTRRLITRKKQFDEHDHDEEIM 200
                        R  G+ +  NM          + I P +R   RKKQFDE +H+E I 
Sbjct: 132 KQVAGVMSYFEKYRNDGFSSSINMAKDLAHEMDIDAIFPKKRRCFRKKQFDEANHEEVIQ 191

Query: 201 SPEESFRINYFLVVVDMAISSLKSRFEQLKIFE 204
           + E+ F++NYFL+VVDMAI+SL  RFEQ++ FE
Sbjct: 192 TSEDEFKVNYFLLVVDMAITSLNDRFEQMRTFE 223
[Close]
BLAST of Spo08403.1 vs. UniProtKB/TrEMBL
Match: A0A0D3APS8_BRAOL (Uncharacterized protein (Fragment) OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.100e-11
Identity = 37/94 (39.36%), Postives = 63/94 (67.02%), Query Frame = 1 

		  

Query: 119 LDVLKCLNLCVDDVRGQGYDNGSNMK---------EPILPTRRLITRKKQFDEHDHDEEI 178
           L  L+ + L  +  R +G+++  N+          +P+ P +R + RKKQFDE D  E++
Sbjct: 561 LKQLQGVILFFEKYRDEGFNSSLNVAKNIAHEMDVDPVFPNKRRVFRKKQFDETDSGEQV 620

Query: 179 MSPEESFRINYFLVVVDMAISSLKSRFEQLKIFE 204
           +S E++FR++YFLVVVDMA++S+K+RF+Q+  F+
Sbjct: 621 LSGEDAFRVDYFLVVVDMALTSVKNRFDQMMNFK 654
[Close]
BLAST of Spo08403.1 vs. UniProtKB/TrEMBL
Match: B8AEM0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06494 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.400e-10
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 1 

		  

Query: 145 EPILPTRRLITRKKQFDE-HDHDEEIMSPEESFRINYFLVVVDMAISSLKSRFEQLKIFE 204
           EP  PT+R   RKK FDE +D +EE  S  ESFR+NYFLV++D+AI+SL SRFEQLK FE
Sbjct: 408 EPKFPTKRQAKRKKHFDEQNDQNEEQQSVVESFRVNYFLVMIDVAIASLTSRFEQLKAFE 467
[Close]
BLAST of Spo08403.1 vs. TAIR (Arabidopsis)
Match: AT4G10200.1 (TTF-type zinc finger protein with HAT dimerisation domain)

HSP 1 Score: 56.2 bits (134), Expect = 2.800e-8
Identity = 26/39 (66.67%), Postives = 28/39 (71.79%), Query Frame = 1 

		  

Query: 106 VDDTSGLGLFNELLDVLKCLNLCVDDVRGQGYDNGSNMK 145
           V D SG GLF  L D L  LNL ++DVRGQGYDNG NMK
Sbjct: 325 VSDKSGEGLFELLCDTLVALNLNINDVRGQGYDNGCNMK 363
[Close]
BLAST of Spo08403.1 vs. TAIR (Arabidopsis)
Match: AT2G06500.1 (hAT family dimerisation domain)

HSP 1 Score: 54.3 bits (129), Expect = 1.100e-7
Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 1 

		  

Query: 151 RRLITRKKQFDEHDHDEEIMSPEESFRINYFLVVVDMAISSLKSRFEQLKIFE 204
           +++I RKK FD   H    +S EE FRINYFL ++D A+ SL+SRFEQ + +E
Sbjct: 377 KKIIRRKKHFD---HGNMKLSTEEDFRINYFLTLIDQALISLESRFEQFQRYE 426
[Close]
BLAST of Spo08403.1 vs. TAIR (Arabidopsis)
Match: AT1G35150.1 (General transcription factor 2-related zinc finger protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.500e-6
Identity = 42/138 (30.43%), Postives = 63/138 (45.65%), Query Frame = 1 

		  

Query: 89  DNLDHKERDILVEKGPPVDD-------TSGLGLFNELL------DVLKCLNLCVDDVRGQ 148
           + L  K ++ LV+    +DD       T G+G+F  L       D+L  +N     ++  
Sbjct: 301 EGLFSKIKEALVDMELEIDDVRGQESETHGIGVFEILFGMILWYDLLAVVNRVSKTLQSA 360

Query: 149 GYD--------NGSNMK---EPILPTRRLITRKKQFDEHDH--DEEI-MSPEESFRINYF 200
             D         G +M    E ++  +R I RKK FDE     DE + +SPEE FRINYF
Sbjct: 361 DIDIDVAIIELKGLDMDIEAEFLVKKKRTIRRKKHFDEVSEKGDENMDLSPEEDFRINYF 420
The following BLAST results are available for this feature:
BLAST of Spo08403.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|1012359324|gb|KYP70508.1|2.9e-1862.9Zinc finger MYM-type protein 1... [more]
gi|727450960|ref|XP_010507183.1|6.4e-1844.5PREDICTED: zinc finger MYM-typ... [more]
gi|731319673|ref|XP_010670398.1|8.3e-1857.8PREDICTED: zinc finger MYM-typ... [more]
gi|731356790|ref|XP_010689867.1|1.0e-1558.9PREDICTED: zinc finger MYM-typ... [more]
gi|731341655|ref|XP_010682004.1|1.3e-1535.2PREDICTED: zinc finger MYM-typ... [more]
back to top
BLAST of Spo08403.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A151TU32_CAJCA2.0e-1862.9Zinc finger MYM-type protein 1... [more]
M5W0U5_PRUPE1.9e-1367.8Uncharacterized protein OS=Pru... [more]
A0A0D2ZUE5_BRAOL1.8e-1130.7Uncharacterized protein OS=Bra... [more]
A0A0D3APS8_BRAOL3.1e-1139.3Uncharacterized protein (Fragm... [more]
B8AEM0_ORYSI3.4e-1063.3Putative uncharacterized prote... [more]
back to top
BLAST of Spo08403.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo08403.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G10200.12.8e-866.6TTF-type zinc finger protein w... [more]
AT2G06500.11.1e-750.9hAT family dimerisation domain[more]
AT1G35150.14.5e-630.4General transcription factor 2... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11697GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEINcoord: 106..203
score: 3.7
NoneNo IPR availablePANTHERPTHR11697:SF113SUBFAMILY NOT NAMEDcoord: 106..203
score: 3.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006506 GPI anchor biosynthetic process
biological_process GO:0009987 cellular process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006281 DNA repair
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0046520 sphingoid biosynthetic process
biological_process GO:0009860 pollen tube growth
biological_process GO:0009846 pollen germination
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0051788 response to misfolded protein
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0045859 regulation of protein kinase activity
biological_process GO:0010389 regulation of G2/M transition of mitotic cell cycle
biological_process GO:0051302 regulation of cell division
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0043248 proteasome assembly
biological_process GO:0048657 anther wall tapetum cell differentiation
biological_process GO:0009742 brassinosteroid mediated signaling pathway
biological_process GO:0008283 cell proliferation
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0048767 root hair elongation
biological_process GO:0010224 response to UV-B
biological_process GO:0002237 response to molecule of bacterial origin
biological_process GO:1900140 regulation of seedling development
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0009932 cell tip growth
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0010584 pollen exine formation
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0060548 negative regulation of cell death
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0048366 leaf development
biological_process GO:0009729 detection of brassinosteroid stimulus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0042023 DNA endoreduplication
biological_process GO:2000123 positive regulation of stomatal complex development
biological_process GO:0006474 N-terminal protein amino acid acetylation
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0010082 regulation of root meristem growth
biological_process GO:0043087 regulation of GTPase activity
biological_process GO:0009909 regulation of flower development
biological_process GO:0006468 protein phosphorylation
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0048481 plant ovule development
biological_process GO:0010014 meristem initiation
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0016570 histone modification
biological_process GO:0048449 floral organ formation
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0071555 cell wall organization
biological_process GO:0007155 cell adhesion
biological_process GO:0045010 actin nucleation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0051017 actin filament bundle assembly
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0006816 calcium ion transport
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006486 protein glycosylation
biological_process GO:0009630 gravitropism
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0071805 potassium ion transmembrane transport
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0010008 endosome membrane
cellular_component GO:0016020 membrane
cellular_component GO:0031248 protein acetyltransferase complex
cellular_component GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0008289 lipid binding
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0015171 amino acid transmembrane transporter activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0015079 potassium ion transmembrane transporter activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003779 actin binding
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0019900 kinase binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0033612 receptor serine/threonine kinase binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016707 gibberellin 3-beta-dioxygenase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0005496 steroid binding
molecular_function GO:0004672 protein kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo148260.80Barchart | Table
Spo214220.78Barchart | Table
Spo144240.78Barchart | Table
Spo263520.76Barchart | Table
Spo109650.76Barchart | Table
Spo124230.75Barchart | Table
Spo154040.75Barchart | Table
Spo027490.75Barchart | Table
Spo112850.75Barchart | Table
Spo088630.75Barchart | Table
Spo172200.74Barchart | Table
Spo241480.74Barchart | Table
Spo201390.74Barchart | Table
Spo267950.74Barchart | Table
Spo036650.74Barchart | Table
Spo125430.74Barchart | Table
Spo043160.73Barchart | Table
Spo013440.73Barchart | Table
Spo269900.73Barchart | Table
Spo034420.73Barchart | Table
Spo152730.73Barchart | Table
Spo172110.73Barchart | Table
Spo005060.73Barchart | Table
Spo046570.73Barchart | Table
Spo185420.72Barchart | Table
Spo142400.72Barchart | Table
Spo181160.72Barchart | Table
Spo056270.72Barchart | Table
Spo267890.71Barchart | Table
Spo065740.71Barchart | Table
Spo049850.71Barchart | Table
Spo037310.71Barchart | Table
Spo158420.71Barchart | Table
Spo092140.71Barchart | Table
Spo195540.71Barchart | Table
Spo149090.71Barchart | Table
Spo115340.71Barchart | Table
Spo016600.70Barchart | Table
Spo015900.70Barchart | Table
Spo057650.70Barchart | Table
Spo070640.70Barchart | Table
Spo070790.70Barchart | Table
Spo238560.70Barchart | Table
Spo089930.70Barchart | Table
Spo113600.70Barchart | Table
Spo116100.70Barchart | Table
Spo218230.70Barchart | Table
Spo164940.70Barchart | Table
Spo231250.69Barchart | Table
Spo261910.69Barchart | Table
Spo088840.69Barchart | Table
Spo190130.69Barchart | Table
Spo183240.69Barchart | Table
Spo149110.69Barchart | Table
Spo266880.69Barchart | Table
Spo165660.69Barchart | Table
Spo264910.69Barchart | Table
Spo174500.69Barchart | Table
Spo205030.69Barchart | Table
Spo269950.69Barchart | Table
Spo109660.69Barchart | Table
Spo037720.69Barchart | Table
Spo018410.69Barchart | Table
Spo206390.69Barchart | Table
Spo018870.69Barchart | Table
Spo234340.69Barchart | Table
Spo034160.69Barchart | Table
Spo031630.69Barchart | Table
Spo238440.68Barchart | Table
Spo101640.68Barchart | Table
Spo237450.68Barchart | Table
Spo048850.68Barchart | Table
Spo001730.68Barchart | Table
Spo119740.68Barchart | Table
Spo020970.68Barchart | Table
Spo131410.68Barchart | Table
Spo031490.68Barchart | Table
Spo171860.68Barchart | Table
Spo181760.68Barchart | Table
Spo150890.68Barchart | Table
Spo196010.68Barchart | Table
Spo004860.68Barchart | Table
Spo074410.68Barchart | Table
Spo250110.68Barchart | Table
Spo207880.68Barchart | Table
Spo253020.68Barchart | Table
Spo172250.67Barchart | Table
Spo023400.67Barchart | Table
Spo025720.67Barchart | Table
Spo039260.67Barchart | Table
Spo044500.67Barchart | Table
Spo054440.67Barchart | Table
Spo076850.67Barchart | Table
Spo077410.67Barchart | Table
Spo079590.67Barchart | Table
Spo124430.67Barchart | Table
Spo141420.67Barchart | Table
Spo158750.67Barchart | Table
Spo177260.67Barchart | Table
Spo177300.67Barchart | Table
Spo196090.67Barchart | Table
Spo213880.67Barchart | Table
Spo217450.67Barchart | Table
Spo230960.67Barchart | Table
Spo238330.67Barchart | Table
Spo239300.67Barchart | Table
Spo265660.67Barchart | Table
Spo048730.66Barchart | Table
Spo010800.66Barchart | Table
Spo062360.66Barchart | Table
Spo028180.66Barchart | Table
Spo149530.66Barchart | Table
Spo059280.66Barchart | Table
Spo056210.66Barchart | Table
Spo214940.66Barchart | Table
Spo236450.66Barchart | Table
Spo031100.66Barchart | Table
Spo189610.66Barchart | Table
Spo145080.66Barchart | Table
Spo266520.66Barchart | Table
Spo175490.66Barchart | Table
Spo160760.66Barchart | Table
Spo173970.66Barchart | Table
Spo162180.66Barchart | Table
Spo205550.65Barchart | Table
Spo207560.65Barchart | Table
Spo223520.65Barchart | Table
Spo230420.65Barchart | Table
Spo143200.65Barchart | Table
Spo133440.65Barchart | Table
Spo111600.65Barchart | Table
Spo022300.65Barchart | Table
Spo082750.65Barchart | Table
Spo078240.65Barchart | Table
Spo242940.65Barchart | Table
Spo060220.65Barchart | Table
Spo054500.65Barchart | Table
Spo049240.65Barchart | Table
Spo270090.65Barchart | Table
Spo176770.65Barchart | Table
Spo202890.65Barchart | Table