Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGTTGCCATCAAGTTCAGAGTCATATCTCACAGCAGGTGCTTCTTCTGACCAGTCACAACGCAGAACCAAAAAAAGAGAATCACTGTGAAGCAGCAATGCAGCTTGAGGGCGGGGTCAGCGCGCTTCTGGTATAACAACTTTTGCAGACTCACAAAATCACAAAGAGCTTATTTATAAGCCCTGTGAAGGTGGTTTCAGCTTACTTACTTTCCTGTAGATGGCGAAAACCGAAATTGTTGCTCATATCTGGTTCGCAATCTCTGCCAAAAATGGCTGCTTGCTCGGCTACCTGAACGGTTGAACAGGTACTGAGTACTAGAATTGGTGTCTGTGTGTTATATTAAAATATCGTAGGTTTAGTTTTGAAATTACTCAAACTGCATGTGGGTTTGTCCAAGTTTATTAAGTTTGTTTCAAATCTCACTATCGTAAATGACAGGTTGTATCAGAAGCCATTAAGATCTTTCTTAAAGTGA ATGGATGGTTGCCATCAAGTTCAGAGTCATATCTCACAGCAGGTGCTTCTTCTGACCAGTCACAACGCAGAACCAAAAAAAGAGAATCACTGTGAAGCAGCAATGCAGCTTGAGGGCGGGGTCAGCGCGCTTCTGCTTACTTACTTTCCTGTAGATGGCGAAAACCGAAATTGTTGCTCATATCTGGTTCGCAATCTCTGCCAAAAATGGCTGCTTGCTCGGCTACCTGAACGGTTGAACAGGTTGTATCAGAAGCCATTAAGATCTTTCTTAAAGTGA ATGGATGGTTGCCATCAAGTTCAGAGTCATATCTCACAGCAGGTGCTTCTTCTGACCAGTCACAACGCAGAACCAAAAAAAGAGAATCACTGTGAAGCAGCAATGCAGCTTGAGGGCGGGGTCAGCGCGCTTCTGCTTACTTACTTTCCTGTAGATGGCGAAAACCGAAATTGTTGCTCATATCTGGTTCGCAATCTCTGCCAAAAATGGCTGCTTGCTCGGCTACCTGAACGGTTGAACAGGTTGTATCAGAAGCCATTAAGATCTTTCTTAAAGTGA MDGCHQVQSHISQQVLLLTSHNAEPKKENHCEAAMQLEGGVSALLLTYFPVDGENRNCCSYLVRNLCQKWLLARLPERLNRLYQKPLRSFLK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08412.1 vs. NCBI nr
Match: gi|902204750|gb|KNA14963.1| (hypothetical protein SOVF_102550 [Spinacia oleracea]) HSP 1 Score: 119.4 bits (298), Expect = 3.300e-24 Identity = 67/116 (57.76%), Postives = 77/116 (66.38%), Query Frame = 1
BLAST of Spo08412.1 vs. NCBI nr
Match: gi|731351431|ref|XP_010687035.1| (PREDICTED: uncharacterized protein LOC104901183 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 80.9 bits (198), Expect = 1.300e-12 Identity = 50/113 (44.25%), Postives = 64/113 (56.64%), Query Frame = 1
BLAST of Spo08412.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R636_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_102550 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.300e-24 Identity = 67/116 (57.76%), Postives = 77/116 (66.38%), Query Frame = 1
BLAST of Spo08412.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BS00_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g187510 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.100e-13 Identity = 50/113 (44.25%), Postives = 64/113 (56.64%), Query Frame = 1
BLAST of Spo08412.1 vs. UniProtKB/TrEMBL
Match: G5DWD7_SILLA (Putative uncharacterized protein (Fragment) OS=Silene latifolia PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.000e-7 Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08412.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 2
BLAST of Spo08412.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 3
BLAST of Spo08412.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo08412.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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