Spo08496 (gene)

Overview
NameSpo08496
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionAuxin-responsive protein
LocationSuper_scaffold_89 : 1192646 .. 1193796 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATAAACAAGAGCATGTGCAGTTGAGAGACAAGTAACTAATGACTCGCTAAGCTTTGTCTTCCAATCAGAATGCTAAGTACACCAAACGTGCATACTCAATTAAAACTAGACCCACCTTTTATATAATTCGACCTCTCTATATATAACCTATAGTTTTGTGTATCTTTTCATCAAAATACACTTTCATAAACTAATCTACAATTAGCATTCTAACAAGATTTTGCAAACTCTGCTTATTGATCATTCAAATTTTCCTAACAATGGAAAGGAGCAACGGAAACTCGAGTTCTCATGAAGATACCGAATTGAGATTAGGGTTACCGGGAACTAATGGATCTGAGAAGAAACGATTGTTTTCTGAAATGAATGAGGAGTCTACTTCTGGTGTAGAAGATTGCCATGACAACATCCTAATTCCACAACCAAAGTAAGTTGATTGATTACATTTTTATGATTTAAATAATTATGTTTGGTTGACTTGATTTTTATTGAATACTATGGATTTGATTTCTATATTAAACTAATTAAATTTTGTTATCTATTAATTTTTTAGGGTTCAAGCAATCGGATGGCCTCCAATTAGATCTTACCGGAAAAATTGCCTTCAAGTCACAAAATCACAAGAAGAACGCACAAGAATGTACGTGAAGGTTAGCATGGACGGAGCTCCTTATCTAAGAAAGATAGATCTAAAACAATACAAAGATTACAAGGAACTCCTAAGGGCCTTAGAAGCCATGTTCAAATTTAATGGTATAGAGTATGAACAAACTTATGAAGACAAAGATGGAGATTGGATGTTGGTTGGAGATGTTCCTTGGGAAATGTTTATTGGTTCTTGCAAAAGGCTTAGATTAGTGAAAGGATCTGAATCAAATGGCTTGGCCTAAAAAATTGAATCATATTTATCATGTAAACTTTTTGAGATGAATATTGTGAATATGTATACAATATACTCTTGGATTACAGAGCTCAAATGTTAAAGTTTAACAGAAGGTTTAGCCTTAACAATTCTGAGCACGGCCATGCATTTTACAGTGTCTAACTCACCGAGAGGCCTTGTTACACAACAACACCATATCCTATCAAAGATAAGAGGACAATCCATTCTTGCAATCTATGAACACCCACTTTGATTCATAGTACGCC

mRNA sequence

TGATAAACAAGAGCATGTGCAGTTGAGAGACAAGTAACTAATGACTCGCTAAGCTTTGTCTTCCAATCAGAATGCTAAGTACACCAAACGTGCATACTCAATTAAAACTAGACCCACCTTTTATATAATTCGACCTCTCTATATATAACCTATAGTTTTGTGTATCTTTTCATCAAAATACACTTTCATAAACTAATCTACAATTAGCATTCTAACAAGATTTTGCAAACTCTGCTTATTGATCATTCAAATTTTCCTAACAATGGAAAGGAGCAACGGAAACTCGAGTTCTCATGAAGATACCGAATTGAGATTAGGGTTACCGGGAACTAATGGATCTGAGAAGAAACGATTGTTTTCTGAAATGAATGAGGAGTCTACTTCTGGTGTAGAAGATTGCCATGACAACATCCTAATTCCACAACCAAAGGTTCAAGCAATCGGATGGCCTCCAATTAGATCTTACCGGAAAAATTGCCTTCAAGTCACAAAATCACAAGAAGAACGCACAAGAATGTACGTGAAGGTTAGCATGGACGGAGCTCCTTATCTAAGAAAGATAGATCTAAAACAATACAAAGATTACAAGGAACTCCTAAGGGCCTTAGAAGCCATGTTCAAATTTAATGGTATAGAGTATGAACAAACTTATGAAGACAAAGATGGAGATTGGATGTTGGTTGGAGATGTTCCTTGGGAAATGTTTATTGGTTCTTGCAAAAGGCTTAGATTAGTGAAAGGATCTGAATCAAATGGCTTGGCCTAAAAAATTGAATCATATTTATCATGTAAACTTTTTGAGATGAATATTGTGAATATGTATACAATATACTCTTGGATTACAGAGCTCAAATGTTAAAGTTTAACAGAAGGTTTAGCCTTAACAATTCTGAGCACGGCCATGCATTTTACAGTGTCTAACTCACCGAGAGGCCTTGTTACACAACAACACCATATCCTATCAAAGATAAGAGGACAATCCATTCTTGCAATCTATGAACACCCACTTTGATTCATAGTACGCC

Coding sequence (CDS)

ATGGAAAGGAGCAACGGAAACTCGAGTTCTCATGAAGATACCGAATTGAGATTAGGGTTACCGGGAACTAATGGATCTGAGAAGAAACGATTGTTTTCTGAAATGAATGAGGAGTCTACTTCTGGTGTAGAAGATTGCCATGACAACATCCTAATTCCACAACCAAAGGTTCAAGCAATCGGATGGCCTCCAATTAGATCTTACCGGAAAAATTGCCTTCAAGTCACAAAATCACAAGAAGAACGCACAAGAATGTACGTGAAGGTTAGCATGGACGGAGCTCCTTATCTAAGAAAGATAGATCTAAAACAATACAAAGATTACAAGGAACTCCTAAGGGCCTTAGAAGCCATGTTCAAATTTAATGGTATAGAGTATGAACAAACTTATGAAGACAAAGATGGAGATTGGATGTTGGTTGGAGATGTTCCTTGGGAAATGTTTATTGGTTCTTGCAAAAGGCTTAGATTAGTGAAAGGATCTGAATCAAATGGCTTGGCCTAA

Protein sequence

MERSNGNSSSHEDTELRLGLPGTNGSEKKRLFSEMNEESTSGVEDCHDNILIPQPKVQAIGWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFKFNGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNGLA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08496.1Spo08496.1mRNA


Homology
[Close]
BLAST of Spo08496.1 vs. NCBI nr
Match: gi|902218311|gb|KNA17991.1| (hypothetical protein SOVF_074790 [Spinacia oleracea])

HSP 1 Score: 202.2 bits (513), Expect = 7.000e-49
Identity = 104/176 (59.09%), Postives = 121/176 (68.75%), Query Frame = 1 

		  

Query: 5   NGNSSSHEDTELRLGLPGTNGSE--KKRLFSEMNEESTSGVEDCHDNILIPQPKVQAIGW 64
           N     H+DTELRLGLPGT       KR FSE+ EEST+   D  ++   P PK Q IGW
Sbjct: 4   NKKGVEHQDTELRLGLPGTEFKTMVNKRSFSEIKEESTTCNVDKSEDNTPPPPKAQVIGW 63

Query: 65  PPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFKF- 124
           PP+RSYRKNCL   K + E   +YVKVSMDGAPYLRKID+K YK Y ELL+AL+ MFK  
Sbjct: 64  PPVRSYRKNCLHALKKEAEVGGVYVKVSMDGAPYLRKIDMKLYKCYSELLKALQDMFKVK 123

Query: 125 -----------NGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNGL 167
                      NG E+  TYEDKDGDWMLVGDVPWEMFI SC+RLR++KGS++ GL
Sbjct: 124 LIGENSEKEGNNGSEFVPTYEDKDGDWMLVGDVPWEMFINSCRRLRIMKGSDARGL 179
[Close]
BLAST of Spo08496.1 vs. NCBI nr
Match: gi|731328084|ref|XP_010674856.1| (PREDICTED: auxin-responsive protein IAA4-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 202.2 bits (513), Expect = 7.000e-49
Identity = 103/168 (61.31%), Postives = 120/168 (71.43%), Query Frame = 1 

		  

Query: 12  EDTELRLGLPGTNGSEK--KRLFSEMNEESTSGVEDCHDNILIPQPKVQAIGWPPIRSYR 71
           +DTELRLGLPGT    +  KR FS++NEESTS  +    N   P PK Q +GWPP+RSYR
Sbjct: 11  QDTELRLGLPGTEFKTQVNKRSFSDINEESTSNDDKSGKNTA-PPPKAQVVGWPPVRSYR 70

Query: 72  KNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFK--------- 131
           KNCLQ  K + E    YVKVSMDGAPYLRKID+K Y  Y ELL++LE MFK         
Sbjct: 71  KNCLQAIKKEAEVGGNYVKVSMDGAPYLRKIDMKLYNGYAELLKSLEDMFKVTVGKYSER 130

Query: 132 --FNGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNGL 167
             +NG E+  TYEDKDGDWMLVGDVPWEMFI SCKRLR++KGS++ GL
Sbjct: 131 EGYNGSEFVPTYEDKDGDWMLVGDVPWEMFINSCKRLRVMKGSDARGL 177
[Close]
BLAST of Spo08496.1 vs. NCBI nr
Match: gi|590642621|ref|XP_007030568.1| (AUX/IAA transcriptional regulator family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 199.9 bits (507), Expect = 3.500e-48
Identity = 107/177 (60.45%), Postives = 118/177 (66.67%), Query Frame = 1 

		  

Query: 14  TELRLGLPGTN-------GSEKKRLFSEMNEESTSG----VEDCH--DNILIPQPKVQAI 73
           T LRLGLPGT+       G   KR   +MNEES SG    V D    D    P  K Q +
Sbjct: 12  TALRLGLPGTSEEQTSASGKSNKRALPDMNEESVSGDNSNVADARKCDQETAPPSKAQVV 71

Query: 74  GWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFK 133
           GWPPIRSYRKNCLQ  K++ E   +YVKVSMDGAPYLRKIDLK YK Y ELL+ALE MFK
Sbjct: 72  GWPPIRSYRKNCLQPKKTEAEAAGIYVKVSMDGAPYLRKIDLKVYKGYPELLKALEDMFK 131

Query: 134 F-----------NGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNGL 167
           F           NG E+  TYEDKDGDWMLVGDVPWEMF  SCKRLR++KGSE+ GL
Sbjct: 132 FKVGEYSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFTNSCKRLRIMKGSEARGL 188
[Close]
BLAST of Spo08496.1 vs. NCBI nr
Match: gi|225451360|ref|XP_002279955.1| (PREDICTED: auxin-induced protein 22D [Vitis vinifera])

HSP 1 Score: 199.5 bits (506), Expect = 4.600e-48
Identity = 106/182 (58.24%), Postives = 118/182 (64.84%), Query Frame = 1 

		  

Query: 12  EDTELRLGLPGTNGSEK----------KRLFSEMNEESTSGVEDCHDNI------LIPQP 71
           E TELRLGLPGT   EK          KR   +MNEES SG      +         P P
Sbjct: 14  EATELRLGLPGTKKPEKQAPPSLKTSNKRALPDMNEESGSGNNSSVSDDGKSHRETAPAP 73

Query: 72  KVQAIGWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRAL 131
           K Q +GWPP+RSYRK+C Q  K++ E  R Y+KVSMDGAPYLRKIDLK YK Y ELL+AL
Sbjct: 74  KAQVVGWPPVRSYRKSCFQPKKTEAEEGRTYLKVSMDGAPYLRKIDLKVYKGYPELLKAL 133

Query: 132 EAMFKF-----------NGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESN 167
           E MFKF           NG EY  TYEDKDGDWMLVGDVPW MFI SCKRLR++KGSE+ 
Sbjct: 134 EEMFKFSVGQYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIMKGSEAR 193
[Close]
BLAST of Spo08496.1 vs. NCBI nr
Match: gi|802758404|ref|XP_012089265.1| (PREDICTED: auxin-induced protein 22D-like [Jatropha curcas])

HSP 1 Score: 198.0 bits (502), Expect = 1.300e-47
Identity = 103/188 (54.79%), Postives = 123/188 (65.43%), Query Frame = 1 

		  

Query: 14  TELRLGLPGTNGSEK--------------KRLFSEMNEESTSGVEDCHDNI--------- 73
           TELRLGLPGT+  ++              KR   +MN+E++S  +  + N+         
Sbjct: 14  TELRLGLPGTSDQDQLDKQTLIPTNPKCNKRSLPDMNDENSSSRDINNSNVSNQKKTDQE 73

Query: 74  LIPQPKVQAIGWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKE 133
             P  K Q +GWPPIRSYRKNC Q  K + E + +YVKVSMDGAPYLRKIDLK YKDY E
Sbjct: 74  TAPPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKDYSE 133

Query: 134 LLRALEAMFKF-----------NGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVK 168
           LL+ALE MFKF           NG EY  TYEDKDGDWMLVGDVPW+MFI SCKRLR++K
Sbjct: 134 LLKALEDMFKFEVGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWDMFINSCKRLRIMK 193
[Close]
BLAST of Spo08496.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FCS6_BETVU (Auxin-responsive protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g082270 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.900e-49
Identity = 103/168 (61.31%), Postives = 120/168 (71.43%), Query Frame = 1 

		  

Query: 12  EDTELRLGLPGTNGSEK--KRLFSEMNEESTSGVEDCHDNILIPQPKVQAIGWPPIRSYR 71
           +DTELRLGLPGT    +  KR FS++NEESTS  +    N   P PK Q +GWPP+RSYR
Sbjct: 11  QDTELRLGLPGTEFKTQVNKRSFSDINEESTSNDDKSGKNTA-PPPKAQVVGWPPVRSYR 70

Query: 72  KNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFK--------- 131
           KNCLQ  K + E    YVKVSMDGAPYLRKID+K Y  Y ELL++LE MFK         
Sbjct: 71  KNCLQAIKKEAEVGGNYVKVSMDGAPYLRKIDMKLYNGYAELLKSLEDMFKVTVGKYSER 130

Query: 132 --FNGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNGL 167
             +NG E+  TYEDKDGDWMLVGDVPWEMFI SCKRLR++KGS++ GL
Sbjct: 131 EGYNGSEFVPTYEDKDGDWMLVGDVPWEMFINSCKRLRVMKGSDARGL 177
[Close]
BLAST of Spo08496.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RER8_SPIOL (Auxin-responsive protein OS=Spinacia oleracea GN=SOVF_074790 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.900e-49
Identity = 104/176 (59.09%), Postives = 121/176 (68.75%), Query Frame = 1 

		  

Query: 5   NGNSSSHEDTELRLGLPGTNGSE--KKRLFSEMNEESTSGVEDCHDNILIPQPKVQAIGW 64
           N     H+DTELRLGLPGT       KR FSE+ EEST+   D  ++   P PK Q IGW
Sbjct: 4   NKKGVEHQDTELRLGLPGTEFKTMVNKRSFSEIKEESTTCNVDKSEDNTPPPPKAQVIGW 63

Query: 65  PPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFKF- 124
           PP+RSYRKNCL   K + E   +YVKVSMDGAPYLRKID+K YK Y ELL+AL+ MFK  
Sbjct: 64  PPVRSYRKNCLHALKKEAEVGGVYVKVSMDGAPYLRKIDMKLYKCYSELLKALQDMFKVK 123

Query: 125 -----------NGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNGL 167
                      NG E+  TYEDKDGDWMLVGDVPWEMFI SC+RLR++KGS++ GL
Sbjct: 124 LIGENSEKEGNNGSEFVPTYEDKDGDWMLVGDVPWEMFINSCRRLRIMKGSDARGL 179
[Close]
BLAST of Spo08496.1 vs. UniProtKB/TrEMBL
Match: A0A061F147_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_026344 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.400e-48
Identity = 107/177 (60.45%), Postives = 118/177 (66.67%), Query Frame = 1 

		  

Query: 14  TELRLGLPGTN-------GSEKKRLFSEMNEESTSG----VEDCH--DNILIPQPKVQAI 73
           T LRLGLPGT+       G   KR   +MNEES SG    V D    D    P  K Q +
Sbjct: 12  TALRLGLPGTSEEQTSASGKSNKRALPDMNEESVSGDNSNVADARKCDQETAPPSKAQVV 71

Query: 74  GWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFK 133
           GWPPIRSYRKNCLQ  K++ E   +YVKVSMDGAPYLRKIDLK YK Y ELL+ALE MFK
Sbjct: 72  GWPPIRSYRKNCLQPKKTEAEAAGIYVKVSMDGAPYLRKIDLKVYKGYPELLKALEDMFK 131

Query: 134 F-----------NGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNGL 167
           F           NG E+  TYEDKDGDWMLVGDVPWEMF  SCKRLR++KGSE+ GL
Sbjct: 132 FKVGEYSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFTNSCKRLRIMKGSEARGL 188
[Close]
BLAST of Spo08496.1 vs. UniProtKB/TrEMBL
Match: D7TUH9_VITVI (Auxin-responsive protein OS=Vitis vinifera GN=VIT_14s0030g02310 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.200e-48
Identity = 106/182 (58.24%), Postives = 118/182 (64.84%), Query Frame = 1 

		  

Query: 12  EDTELRLGLPGTNGSEK----------KRLFSEMNEESTSGVEDCHDNI------LIPQP 71
           E TELRLGLPGT   EK          KR   +MNEES SG      +         P P
Sbjct: 14  EATELRLGLPGTKKPEKQAPPSLKTSNKRALPDMNEESGSGNNSSVSDDGKSHRETAPAP 73

Query: 72  KVQAIGWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRAL 131
           K Q +GWPP+RSYRK+C Q  K++ E  R Y+KVSMDGAPYLRKIDLK YK Y ELL+AL
Sbjct: 74  KAQVVGWPPVRSYRKSCFQPKKTEAEEGRTYLKVSMDGAPYLRKIDLKVYKGYPELLKAL 133

Query: 132 EAMFKF-----------NGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESN 167
           E MFKF           NG EY  TYEDKDGDWMLVGDVPW MFI SCKRLR++KGSE+ 
Sbjct: 134 EEMFKFSVGQYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIMKGSEAR 193
[Close]
BLAST of Spo08496.1 vs. UniProtKB/TrEMBL
Match: A0A067JI83_JATCU (Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_23499 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.300e-48
Identity = 103/188 (54.79%), Postives = 123/188 (65.43%), Query Frame = 1 

		  

Query: 14  TELRLGLPGTNGSEK--------------KRLFSEMNEESTSGVEDCHDNI--------- 73
           TELRLGLPGT+  ++              KR   +MN+E++S  +  + N+         
Sbjct: 14  TELRLGLPGTSDQDQLDKQTLIPTNPKCNKRSLPDMNDENSSSRDINNSNVSNQKKTDQE 73

Query: 74  LIPQPKVQAIGWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKE 133
             P  K Q +GWPPIRSYRKNC Q  K + E + +YVKVSMDGAPYLRKIDLK YKDY E
Sbjct: 74  TAPPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKDYSE 133

Query: 134 LLRALEAMFKF-----------NGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVK 168
           LL+ALE MFKF           NG EY  TYEDKDGDWMLVGDVPW+MFI SCKRLR++K
Sbjct: 134 LLKALEDMFKFEVGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWDMFINSCKRLRIMK 193
[Close]
BLAST of Spo08496.1 vs. ExPASy Swiss-Prot
Match: AX22D_VIGRR (Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.600e-45
Identity = 103/190 (54.21%), Postives = 125/190 (65.79%), Query Frame = 1 

		  

Query: 1   MERSNGNSSSH---EDTELRLGLPGTNGSEK-------KRLFSEMNEEST--SGVEDCHD 60
           ME S G+       + TELRLGLPG++  EK       KR   E ++E +  +G +   +
Sbjct: 1   MENSLGSYEKELNLKATELRLGLPGSDEPEKRATARSNKRSSPEASDEESISNGSDVTKE 60

Query: 61  NILIPQPKVQAIGWPPIRSYRKNCLQVTKSQE-ERTRMYVKVSMDGAPYLRKIDLKQYKD 120
           + ++P  K Q +GWPPIRSYRKN +Q  K +E E   MYVKVSM GAPYLRKIDLK YK 
Sbjct: 61  DNVVPPAKAQVVGWPPIRSYRKNNVQQKKEEESEGNGMYVKVSMAGAPYLRKIDLKVYKS 120

Query: 121 YKELLRALEAMFK-----------FNGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLR 167
           Y ELL+ALE MFK           +NG EY  TYEDKDGDWMLVGDVPW MF+ SCKRLR
Sbjct: 121 YPELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLR 180
[Close]
BLAST of Spo08496.1 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=1 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 3.600e-45
Identity = 94/169 (55.62%), Postives = 110/169 (65.09%), Query Frame = 1 

		  

Query: 14  TELRLGLPGTN-----GSEKKRLFSEMNEESTSGVEDCHDNILIPQPKVQAIGWPPIRSY 73
           TELRLGLPGT      G   KR+  E  E+    +E          PK Q +GWPP+RSY
Sbjct: 16  TELRLGLPGTEETVSCGKSNKRVLPEATEKE---IESTGKTETASPPKAQIVGWPPVRSY 75

Query: 74  RKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFKFN------ 133
           RKN +Q  KS+ E    YVKVSMDGAPYLRKIDL  YK Y EL+++LE MFKF+      
Sbjct: 76  RKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFE 135

Query: 134 -----GIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNGL 167
                G ++  TYEDKDGDWMLVGDVPWEMF+ SCKRLR++KGSE  GL
Sbjct: 136 REGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181
[Close]
BLAST of Spo08496.1 vs. ExPASy Swiss-Prot
Match: AX22E_VIGRR (Auxin-induced protein 22E OS=Vigna radiata var. radiata GN=AUX22E PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.400e-43
Identity = 97/188 (51.60%), Postives = 119/188 (63.30%), Query Frame = 1 

		  

Query: 14  TELRLGLPGTNGSEKKR-----LFSEMNEESTSGVED--CHDNI---------------- 73
           TELRLGLPG++  ++KR     +    N+ S+  +E+  C  NI                
Sbjct: 13  TELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPELEESRCKSNINSDSSDSTTTSDHNED 72

Query: 74  LIPQPKVQAIGWPPIRSYRKNCLQVTK-SQEERTRMYVKVSMDGAPYLRKIDLKQYKDYK 133
            +   KVQ +GWPPIRS+RKN LQ  K  Q + T MY+KVSM GAPYLRKIDLK YK Y 
Sbjct: 73  SVQPAKVQVVGWPPIRSFRKNSLQQKKVEQGDGTGMYLKVSMAGAPYLRKIDLKVYKSYP 132

Query: 134 ELLRALEAMFK-----------FNGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLV 167
           ELL+AL+ +FK           +NG EY  TYEDKDGDWMLVGDVPW MF+ SCKRLR++
Sbjct: 133 ELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRII 192
[Close]
BLAST of Spo08496.1 vs. ExPASy Swiss-Prot
Match: AX22B_VIGRR (Auxin-induced protein 22B OS=Vigna radiata var. radiata GN=AUX22B PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.300e-42
Identity = 94/181 (51.93%), Postives = 114/181 (62.98%), Query Frame = 1 

		  

Query: 14  TELRLGLPGTNGSE------------KKRLFSEMNEESTSGVEDCH-----DNILIPQPK 73
           TELRLGLPGT   E             KR   E +++S S  +  H     + +  P PK
Sbjct: 16  TELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKASHHQQHVETVSAPPPK 75

Query: 74  VQAIGWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALE 133
            + +GWPPIRSYRKN +Q    + E   ++VKVSMDGAPYLRK+DLK Y  Y ELL+ALE
Sbjct: 76  AKIVGWPPIRSYRKNSVQ----EGEGDGIFVKVSMDGAPYLRKVDLKVYGGYPELLKALE 135

Query: 134 AMFK-----------FNGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNG 167
            MFK           + G EY  TYEDKDGDWMLVGDVPW+MF+ SCKRLR++KGSE+ G
Sbjct: 136 TMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARG 192
[Close]
BLAST of Spo08496.1 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.200e-42
Identity = 94/181 (51.93%), Postives = 116/181 (64.09%), Query Frame = 1 

		  

Query: 12  EDTELRLGLPGT-------------NGSEKKRLFSEMNEESTSGVEDCHDNILIPQPKVQ 71
           ++TELRLGLPGT             N + K+ L ++  +E  S       +   P  K Q
Sbjct: 8   KETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETS---PPRKAQ 67

Query: 72  AIGWPPIRSYRKNCLQVTK--SQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALE 131
            +GWPP+RSYRKN +Q  K  S+ E   +YVKVSMDGAPYLRKIDL  YK Y ELL+ALE
Sbjct: 68  IVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALE 127

Query: 132 AMFKFN-----------GIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNG 167
            MFKF+           G ++  TYEDKDGDWML+GDVPWEMFI +CKRLR++KGSE+ G
Sbjct: 128 VMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKG 185
[Close]
BLAST of Spo08496.1 vs. TAIR (Arabidopsis)
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 182.6 bits (462), Expect = 2.000e-46
Identity = 94/169 (55.62%), Postives = 110/169 (65.09%), Query Frame = 1 

		  

Query: 14  TELRLGLPGTN-----GSEKKRLFSEMNEESTSGVEDCHDNILIPQPKVQAIGWPPIRSY 73
           TELRLGLPGT      G   KR+  E  E+    +E          PK Q +GWPP+RSY
Sbjct: 16  TELRLGLPGTEETVSCGKSNKRVLPEATEKE---IESTGKTETASPPKAQIVGWPPVRSY 75

Query: 74  RKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFKFN------ 133
           RKN +Q  KS+ E    YVKVSMDGAPYLRKIDL  YK Y EL+++LE MFKF+      
Sbjct: 76  RKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFE 135

Query: 134 -----GIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNGL 167
                G ++  TYEDKDGDWMLVGDVPWEMF+ SCKRLR++KGSE  GL
Sbjct: 136 REGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181
[Close]
BLAST of Spo08496.1 vs. TAIR (Arabidopsis)
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.200e-43
Identity = 94/181 (51.93%), Postives = 116/181 (64.09%), Query Frame = 1 

		  

Query: 12  EDTELRLGLPGT-------------NGSEKKRLFSEMNEESTSGVEDCHDNILIPQPKVQ 71
           ++TELRLGLPGT             N + K+ L ++  +E  S       +   P  K Q
Sbjct: 8   KETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETS---PPRKAQ 67

Query: 72  AIGWPPIRSYRKNCLQVTK--SQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALE 131
            +GWPP+RSYRKN +Q  K  S+ E   +YVKVSMDGAPYLRKIDL  YK Y ELL+ALE
Sbjct: 68  IVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALE 127

Query: 132 AMFKFN-----------GIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSESNG 167
            MFKF+           G ++  TYEDKDGDWML+GDVPWEMFI +CKRLR++KGSE+ G
Sbjct: 128 VMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKG 185
[Close]
BLAST of Spo08496.1 vs. TAIR (Arabidopsis)
Match: AT4G14560.1 (indole-3-acetic acid inducible)

HSP 1 Score: 158.7 bits (400), Expect = 3.200e-39
Identity = 89/174 (51.15%), Postives = 109/174 (62.64%), Query Frame = 1 

		  

Query: 1   MERSNGNSSSHEDTELRLGLPGTNGSEKKRLFSEMNEESTSGVEDCHDNILIPQPKVQAI 60
           ME +NG +   +DTELRLGLPG    ++  L S +   +     D  +    P  K Q +
Sbjct: 1   MEVTNGLNL--KDTELRLGLPGAQEEQQLEL-SCVRSNNKRKNNDSTEESAPPPAKTQIV 60

Query: 61  GWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRALEAMFK 120
           GWPP+RS RKN          +   YVKVSMDGAPYLRKIDLK YK+Y ELL+ALE MFK
Sbjct: 61  GWPPVRSNRKN-------NNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFK 120

Query: 121 FNGIEYEQ-----------TYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSES 164
           F   EY +           TYEDKDGDWMLVGDVPW+MF  SC++LR++KGSE+
Sbjct: 121 FTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
[Close]
BLAST of Spo08496.1 vs. TAIR (Arabidopsis)
Match: AT3G23030.1 (indole-3-acetic acid inducible 2)

HSP 1 Score: 156.8 bits (395), Expect = 1.200e-38
Identity = 91/183 (49.73%), Postives = 106/183 (57.92%), Query Frame = 1 

		  

Query: 7   NSSSHEDTELRLGLPGTNG------------SEKKRLFSEMNEESTSGVEDCHDNILIPQ 66
           N  + +DTEL LGLPG               S  KRLF E  +E  S           P 
Sbjct: 7   NELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRDEEES----------TPP 66

Query: 67  PKVQAIGWPPIRSYRKNCLQVTKSQEERTRMYVKVSMDGAPYLRKIDLKQYKDYKELLRA 126
            K Q +GWPP+RS RKN   V+         YVKVSMDGAPYLRKIDLK YK+Y ELL+A
Sbjct: 67  TKTQIVGWPPVRSSRKNNNSVS---------YVKVSMDGAPYLRKIDLKTYKNYPELLKA 126

Query: 127 LEAMFK-----------FNGIEYEQTYEDKDGDWMLVGDVPWEMFIGSCKRLRLVKGSES 167
           LE MFK           + G  +  TYEDKDGDWMLVGDVPW+MF  SCKRLR++KGS++
Sbjct: 127 LENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDA 170
[Close]
BLAST of Spo08496.1 vs. TAIR (Arabidopsis)
Match: AT3G04730.1 (indoleacetic acid-induced protein 16)

HSP 1 Score: 155.6 bits (392), Expect = 2.700e-38
Identity = 96/221 (43.44%), Postives = 117/221 (52.94%), Query Frame = 1 

		  

Query: 12  EDTELRLGLPGTN-GSEK------KRLFSE------------MNEESTSGVEDCHDNILI 71
           E TELRLGLPG N G E       KR FSE            M+  S   +E+  + ++ 
Sbjct: 5   EATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEKVVK 64

Query: 72  PQPKVQAIGWPPIRSYRKNCLQ--------VTKSQEER--------------TRMYVKVS 131
           P  K Q +GWPP+RS+RKN +          T+  ++               T  YVKVS
Sbjct: 65  PPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVS 124

Query: 132 MDGAPYLRKIDLKQYKDYKELLRALEAMFK------------------------FNGIEY 168
           MDGAPYLRKIDLK YK Y++L  AL  MF                          NG +Y
Sbjct: 125 MDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGSDY 184
The following BLAST results are available for this feature:
BLAST of Spo08496.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902218311|gb|KNA17991.1|7.0e-4959.0hypothetical protein SOVF_0747... [more]
gi|731328084|ref|XP_010674856.1|7.0e-4961.3PREDICTED: auxin-responsive pr... [more]
gi|590642621|ref|XP_007030568.1|3.5e-4860.4AUX/IAA transcriptional regula... [more]
gi|225451360|ref|XP_002279955.1|4.6e-4858.2PREDICTED: auxin-induced prote... [more]
gi|802758404|ref|XP_012089265.1|1.3e-4754.7PREDICTED: auxin-induced prote... [more]
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BLAST of Spo08496.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8FCS6_BETVU4.9e-4961.3Auxin-responsive protein OS=Be... [more]
A0A0K9RER8_SPIOL4.9e-4959.0Auxin-responsive protein OS=Sp... [more]
A0A061F147_THECC2.4e-4860.4Auxin-responsive protein OS=Th... [more]
D7TUH9_VITVI3.2e-4858.2Auxin-responsive protein OS=Vi... [more]
A0A067JI83_JATCU9.3e-4854.7Auxin-responsive protein OS=Ja... [more]
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BLAST of Spo08496.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
AX22D_VIGRR1.6e-4554.2Auxin-induced protein 22D OS=V... [more]
IAA4_ARATH3.6e-4555.6Auxin-responsive protein IAA4 ... [more]
AX22E_VIGRR3.4e-4351.6Auxin-induced protein 22E OS=V... [more]
AX22B_VIGRR1.3e-4251.9Auxin-induced protein 22B OS=V... [more]
IAA3_ARATH2.2e-4251.9Auxin-responsive protein IAA3 ... [more]
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BLAST of Spo08496.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G43700.12.0e-4655.6AUX/IAA transcriptional regula... [more]
AT1G04240.11.2e-4351.9AUX/IAA transcriptional regula... [more]
AT4G14560.13.2e-3951.1indole-3-acetic acid inducible[more]
AT3G23030.11.2e-3849.7indole-3-acetic acid inducible... [more]
AT3G04730.12.7e-3843.4indoleacetic acid-induced prot... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 84..160
score: 25
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 12..166
score: 2.6
NoneNo IPR availablePANTHERPTHR31734:SF11AUXIN-RESPONSIVE PROTEIN IAA1-RELATEDcoord: 12..166
score: 2.6
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 78..157
score: 2.35

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo084990.75Barchart | Table
Spo023710.72Barchart | Table