Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCTTAAAGCATCAAATAGTGTAGGTTAATGGCAAACAAAAAGCCAACTAGCCAAATGCAATATGCATTGTCCACTACCCCAAACATCTCTCCTTCTCCTCCGCACTTTTTTTAATTTCTTTTATTTTTAATGTTTGACATCATTGTTTACGTCATATTCCTCATTATTATCAGGACAACCGTCCAAATAATACACCCTTCCACGTGTCGTCATCTTAATCGTTTCATGTTTCTCCCACCATTTCCTTATATTATCACTTCTCTTCACTTCCACCCAACCCTTCTTCTTTTTTCTCTCTTTCTCTCTTTCTCTCTCCTCATTTCTCCAGCAAACAACGCTTAAAGAAAATTGAATCCAAAATTTTAGCAGAAAAAAAGGCTGAATTTCAAGAAATTATAATTTAGAAGAATTTGACTTGATTTACAAGTCAAAAATTAAGATCTAAAATGTTGAGCACTGAGAGAGACAAGTACAGTATGATTAATTTCGAGGAAACGGAGCTTCGACTCGGGCTTGGGCTCGGACTTGGGCTACCCGGAGTATCTTGTGAACAACTTGCAGCAGCAGATCAGTTGGCGAAGAATAACAATGGGAAGAGAGGCTTCTCTGAGACGGAAGGTGACTCTAGTGTTGATTTGAAGCTTAATCTTTCGACCACGGCAACTACGACAACAACCACCACCACAAACACCGCTTCTGCCACCTCTACCGCTTCCGTAGTAAGAGATAGTAAGGCGGACCAAGATGTTGCTGCTGATCATAAGTTAAAGGAGAAAGTTACCGCAGCTCCTACTTCTACTGCTGCTGCTGATCCCGCTAAACCCCCTGCTGCTAAGTAAGTTTTCTTTTACATTTTATTTAACATTTACTTTATTATTTGGCTTATTTATTTTATTGTATTATTTTTGTTAGTTTGTGGCTTAGAGATAGCCCGGAAGGTTAAAGGAAGTAAACGAGACTTGATTCTTACCGATTAAGATAGTTGACCCCACTCTACTTAATAATAAGTGGATCGGAACTTTCTCCAATTACTCGGAAAATTAAAGTGGTTGTTCTTAAATTCTTACGTATTTCCCATCCGTAAACGGATTGAAACGAAAAGTGGGAAGATTGTTACGAAACGAAAGTGTATGATTTTGCAATACAAACATGCAAAAAGGATGTATGTAAGATTAGCTAAAAAAAAATTAGTGATGGAGATTAGTAGTTAGGTCAAAATGGTGTGATATTGGTAGGAAGCACGTGTGGGTGAACAAATAATAGAATGGTTAAACACAAGAGTGTGAAAAATTAGAACACATGCAAATGCAAATTAAAGACGATTGAAAAAAATAGTGTCAGCTTTGTTATTTCGTCGTTTTTTCTTGCGTCTTGTTTGTTTTATTGGGAAAATGACAACTCCGTCTCTCTTACCTCTCCTTTGCTGTCGGCTTTACAAAGCACTAAACTACACCCAACATTTGGAATCTTTGGCTTTTTTCTTTTCTTTCTCTTTATTTTCTTTAAAGTCTTACCCACCAAACACGTCCTTGCTGTTTTTACTCCTTTTTAAGTTGGGTTTAATGCTTTAGATCTGTTACAAATTCGGTCCCCTCACCCTCGTGCGGAATTTTTATTCTACTAGACTTGATTTTTTTACCGAGTTACTGTTCTTTTAATAACTTGATTTTTTTTACCGAGTTACTGTTCTTTTAATAACTTGATTTTTTTACCGAGTTACTGTTCTTTTAATATCTTCGAGTTAATTTCGAATATTAACTTTTAATGTCCCGCATAAAGTTCTTAGGTGTGATAGTTTCACTCGAAACTTTCTCGAAATTCAACTCCGGAGATCCAAACTTAAAAAAGAGTTAACTAGATAGATCTGTTGGATTTGGTGAATTCCGGGAACAGGGGAGTATGTCATTGATCATAACAATACAATATCAGTTCTAACCGTGTTAGGAAACCTTATGAGAACCGGTCGGCTTAGGAATTAGGGTAACATGATATTTCCGCTGCGAATGACTAAATTGATTTGTAAATTTGAGATAATTTAAAGTAAACATTTACCTTGACTATCAACGGTCAAATGATGTTTTTGTTAAACTTGGTCTTTTATTTAGGGAACATAGTAAATTAGATTTGTACTTGTAATCTTGTATCATGACGACGAAGAATGAGAGTATTGTCATTTGAACAACTATATTCAAATGAGATGATAAAAGGAAAGAAAAACCTAATTAGTTTTGGTCAATGTCAAACCTTGTTTAGTCAATAATACATTTAATACTCAAATTGTAACAAAGAAAATATAGATTGTCTAGTCTAAATTCTAATAAAGTAAATAAGCACTTGACTAATTCAAATTTTTGTTGTTCCCTCAGGACACAAGTTGTAGGTTGGCCACCAGTTCGAGCGTTCAGGAAGAACATAGTAGCCGTCCAAAAGAAGAGCTCGGACGAGCAAGCTGATCAAAAGTCTTCTACCAACACAATCACAAGTGCAGCATTTGTCAAGGTCAGCATGGATGGCGCGCCTTACCTGCGTAAGGTAGACTTGAAATTGTACAAGAGTTATCAAGACCTCTCTGATGCCTTGGGCAAAATGTTCAGCTCCTTTACCATAGGTATACTACTAATTACCCCTAATTAATCTTGTGATGAATTTAGACTTATCGTGTAATTTATATTCCTATGACGGTGATGAAAGAAAGCTAATTAATTATAAAATGAAGGTAATTGCGGGTCACAAGGAATGAAGGATTTCATGAACGAAAGCAAATTGATTGATCTTTTGAATGGTTCTGAGTACGTCCCTACTTATGAAGATAAGGATGCTGATTGGATGCTTGTCGGTGATGTTCCATGGGAGTAAGTTTCTCTGAAGCTTTTCTCAATAAATATTTTTTTGTATTTAGCGGGATCAAGCTAGTATAACATTGCCGGGTGATGTTACTGTCAATAAATTTCGATGTAATGACTAATTACACATCTTCTTGTTCAATAGAATGTTCGTCGGATCATGCAAACGTCTCCGTATCATGAAGGGATCAGAAGCCATTGGACTAGGTTTGCCCCTATCTTACTTTTGTTAATAAACGCGGATTGTATATATTTTAATAAACTTACGAAAATGTTCTGGGTTAATTTGCAGCACCAAGGGCTGTTGAGAAGTGCAAGAATAGAAGCTGAAGATATTTTTATTGATGTTTAATGTTTGCACAATTCGATGTAAAACTTGTCCTTAATTTTTTTTTTTTTTTTTTTTGCTTAGTGTTAAAAGAAAGCCCTTTTTATATGAAAATTTTAAAAGTNTTTTTTTTTTTTTTTTTTGCTTAGTGTTAAAAGAAAGCCCTTTTTATATGAAAATTTTAAAAGTTGATGGGAAGGCAGACCGGCTCGAGAGGGATCGAGCAAGATGTCTGGCTGGTGTAATATTTTTGGTTAACGTTCTTGATAATTATGTGAAGAAAAAGTTGTCATATGATTATATATTATAGTTAATTTCTTGCTTTCATTTTATTCTTTAAGTTGTTGGAATAAATTTCCTATTCCTATGGTACTCTGTATTCATTTGGGAAATGTCTAATTTTTAAAGTGAGGGAGATAAGTTTTGATAAAATAAATTTTAATCA TTTCCTTAAAGCATCAAATAGTGTAGGTTAATGGCAAACAAAAAGCCAACTAGCCAAATGCAATATGCATTGTCCACTACCCCAAACATCTCTCCTTCTCCTCCGCACTTTTTTTAATTTCTTTTATTTTTAATGTTTGACATCATTGTTTACGTCATATTCCTCATTATTATCAGGACAACCGTCCAAATAATACACCCTTCCACGTGTCGTCATCTTAATCGTTTCATGTTTCTCCCACCATTTCCTTATATTATCACTTCTCTTCACTTCCACCCAACCCTTCTTCTTTTTTCTCTCTTTCTCTCTTTCTCTCTCCTCATTTCTCCAGCAAACAACGCTTAAAGAAAATTGAATCCAAAATTTTAGCAGAAAAAAAGGCTGAATTTCAAGAAATTATAATTTAGAAGAATTTGACTTGATTTACAAGTCAAAAATTAAGATCTAAAATGTTGAGCACTGAGAGAGACAAGTACAGTATGATTAATTTCGAGGAAACGGAGCTTCGACTCGGGCTTGGGCTCGGACTTGGGCTACCCGGAGTATCTTGTGAACAACTTGCAGCAGCAGATCAGTTGGCGAAGAATAACAATGGGAAGAGAGGCTTCTCTGAGACGGAAGGTGACTCTAGTGTTGATTTGAAGCTTAATCTTTCGACCACGGCAACTACGACAACAACCACCACCACAAACACCGCTTCTGCCACCTCTACCGCTTCCGTAGTAAGAGATAGTAAGGCGGACCAAGATGTTGCTGCTGATCATAAGTTAAAGGAGAAAGTTACCGCAGCTCCTACTTCTACTGCTGCTGCTGATCCCGCTAAACCCCCTGCTGCTAAGACACAAGTTGTAGGTTGGCCACCAGTTCGAGCGTTCAGGAAGAACATAGTAGCCGTCCAAAAGAAGAGCTCGGACGAGCAAGCTGATCAAAAGTCTTCTACCAACACAATCACAAGTGCAGCATTTGTCAAGGTCAGCATGGATGGCGCGCCTTACCTGCGTAAGGTAGACTTGAAATTGTACAAGAGTTATCAAGACCTCTCTGATGCCTTGGGCAAAATGTTCAGCTCCTTTACCATAGGTAATTGCGGGTCACAAGGAATGAAGGATTTCATGAACGAAAGCAAATTGATTGATCTTTTGAATGGTTCTGAGTACGTCCCTACTTATGAAGATAAGGATGCTGATTGGATGCTTGTCGGTGATGTTCCATGGGAAATGTTCGTCGGATCATGCAAACGTCTCCGTATCATGAAGGGATCAGAAGCCATTGGACTAGCACCAAGGGCTGTTGAGAAGTGCAAGAATAGAAGCTGAAGATATTTTTATTGATGTTTAATGTTTGCACAATTCGATGTAAAACTTGTCCTTAATTTTTTTTTTTTTTTTTTTTGCTTAGTGTTAAAAGAAAGCCCTTTTTATATGAAAATTTTAAAAGTNTTTTTTTTTTTTTTTTTTGCTTAGTGTTAAAAGAAAGCCCTTTTTATATGAAAATTTTAAAAGTTGATGGGAAGGCAGACCGGCTCGAGAGGGATCGAGCAAGATGTCTGGCTGGTGTAATATTTTTGGTTAACGTTCTTGATAATTATGTGAAGAAAAAGTTGTCATATGATTATATATTATAGTTAATTTCTTGCTTTCATTTTATTCTTTAAGTTGTTGGAATAAATTTCCTATTCCTATGGTACTCTGTATTCATTTGGGAAATGTCTAATTTTTAAAGTGAGGGAGATAAGTTTTGATAAAATAAATTTTAATCA ATGTTGAGCACTGAGAGAGACAAGTACAGTATGATTAATTTCGAGGAAACGGAGCTTCGACTCGGGCTTGGGCTCGGACTTGGGCTACCCGGAGTATCTTGTGAACAACTTGCAGCAGCAGATCAGTTGGCGAAGAATAACAATGGGAAGAGAGGCTTCTCTGAGACGGAAGGTGACTCTAGTGTTGATTTGAAGCTTAATCTTTCGACCACGGCAACTACGACAACAACCACCACCACAAACACCGCTTCTGCCACCTCTACCGCTTCCGTAGTAAGAGATAGTAAGGCGGACCAAGATGTTGCTGCTGATCATAAGTTAAAGGAGAAAGTTACCGCAGCTCCTACTTCTACTGCTGCTGCTGATCCCGCTAAACCCCCTGCTGCTAAGACACAAGTTGTAGGTTGGCCACCAGTTCGAGCGTTCAGGAAGAACATAGTAGCCGTCCAAAAGAAGAGCTCGGACGAGCAAGCTGATCAAAAGTCTTCTACCAACACAATCACAAGTGCAGCATTTGTCAAGGTCAGCATGGATGGCGCGCCTTACCTGCGTAAGGTAGACTTGAAATTGTACAAGAGTTATCAAGACCTCTCTGATGCCTTGGGCAAAATGTTCAGCTCCTTTACCATAGGTAATTGCGGGTCACAAGGAATGAAGGATTTCATGAACGAAAGCAAATTGATTGATCTTTTGAATGGTTCTGAGTACGTCCCTACTTATGAAGATAAGGATGCTGATTGGATGCTTGTCGGTGATGTTCCATGGGAAATGTTCGTCGGATCATGCAAACGTCTCCGTATCATGAAGGGATCAGAAGCCATTGGACTAGCACCAAGGGCTGTTGAGAAGTGCAAGAATAGAAGCTGA MLSTERDKYSMINFEETELRLGLGLGLGLPGVSCEQLAAADQLAKNNNGKRGFSETEGDSSVDLKLNLSTTATTTTTTTTNTASATSTASVVRDSKADQDVAADHKLKEKVTAAPTSTAAADPAKPPAAKTQVVGWPPVRAFRKNIVAVQKKSSDEQADQKSSTNTITSAAFVKVSMDGAPYLRKVDLKLYKSYQDLSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSEYVPTYEDKDADWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLAPRAVEKCKNRS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08497.1 vs. NCBI nr
Match: gi|902169290|gb|KNA07639.1| (hypothetical protein SOVF_169970 [Spinacia oleracea]) HSP 1 Score: 526.6 bits (1355), Expect = 2.800e-146 Identity = 277/278 (99.64%), Postives = 278/278 (100.00%), Query Frame = 1
BLAST of Spo08497.1 vs. NCBI nr
Match: gi|731328082|ref|XP_010674855.1| (PREDICTED: auxin-induced protein AUX28 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 407.9 bits (1047), Expect = 1.500e-110 Identity = 229/300 (76.33%), Postives = 250/300 (83.33%), Query Frame = 1
BLAST of Spo08497.1 vs. NCBI nr
Match: gi|590642617|ref|XP_007030567.1| (Indoleacetic acid-induced protein 16 [Theobroma cacao]) HSP 1 Score: 344.7 bits (883), Expect = 1.500e-91 Identity = 199/285 (69.82%), Postives = 215/285 (75.44%), Query Frame = 1
BLAST of Spo08497.1 vs. NCBI nr
Match: gi|802758414|ref|XP_012089266.1| (PREDICTED: auxin-responsive protein IAA16 [Jatropha curcas]) HSP 1 Score: 337.8 bits (865), Expect = 1.900e-89 Identity = 194/290 (66.90%), Postives = 214/290 (73.79%), Query Frame = 1
BLAST of Spo08497.1 vs. NCBI nr
Match: gi|255580939|ref|XP_002531288.1| (PREDICTED: auxin-responsive protein IAA16 [Ricinus communis]) HSP 1 Score: 332.4 bits (851), Expect = 7.800e-88 Identity = 192/293 (65.53%), Postives = 207/293 (70.65%), Query Frame = 1
BLAST of Spo08497.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QK79_SPIOL (Auxin-responsive protein OS=Spinacia oleracea GN=SOVF_169970 PE=3 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 2.000e-146 Identity = 277/278 (99.64%), Postives = 278/278 (100.00%), Query Frame = 1
BLAST of Spo08497.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIV7_BETVU (Auxin-responsive protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g082260 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 1.000e-110 Identity = 229/300 (76.33%), Postives = 250/300 (83.33%), Query Frame = 1
BLAST of Spo08497.1 vs. UniProtKB/TrEMBL
Match: A0A061F988_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_026343 PE=3 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 1.100e-91 Identity = 199/285 (69.82%), Postives = 215/285 (75.44%), Query Frame = 1
BLAST of Spo08497.1 vs. UniProtKB/TrEMBL
Match: A0A067JIG3_JATCU (Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_23500 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.300e-89 Identity = 194/290 (66.90%), Postives = 214/290 (73.79%), Query Frame = 1
BLAST of Spo08497.1 vs. UniProtKB/TrEMBL
Match: B9SZ69_RICCO (Auxin-responsive protein OS=Ricinus communis GN=RCOM_0484470 PE=3 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 5.400e-88 Identity = 192/293 (65.53%), Postives = 207/293 (70.65%), Query Frame = 1
BLAST of Spo08497.1 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.200e-75 Identity = 170/288 (59.03%), Postives = 194/288 (67.36%), Query Frame = 1
BLAST of Spo08497.1 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.200e-72 Identity = 170/285 (59.65%), Postives = 189/285 (66.32%), Query Frame = 1
BLAST of Spo08497.1 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 6.600e-71 Identity = 171/285 (60.00%), Postives = 192/285 (67.37%), Query Frame = 1
BLAST of Spo08497.1 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.200e-66 Identity = 161/285 (56.49%), Postives = 189/285 (66.32%), Query Frame = 1
BLAST of Spo08497.1 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 249.2 bits (635), Expect = 5.400e-65 Identity = 160/278 (57.55%), Postives = 181/278 (65.11%), Query Frame = 1
BLAST of Spo08497.1 vs. TAIR (Arabidopsis)
Match: AT3G04730.1 (indoleacetic acid-induced protein 16) HSP 1 Score: 284.6 bits (727), Expect = 6.600e-77 Identity = 170/288 (59.03%), Postives = 194/288 (67.36%), Query Frame = 1
BLAST of Spo08497.1 vs. TAIR (Arabidopsis)
Match: AT3G23050.1 (indole-3-acetic acid 7) HSP 1 Score: 253.8 bits (647), Expect = 1.200e-67 Identity = 161/285 (56.49%), Postives = 189/285 (66.32%), Query Frame = 1
BLAST of Spo08497.1 vs. TAIR (Arabidopsis)
Match: AT4G14550.1 (indole-3-acetic acid inducible 14) HSP 1 Score: 249.2 bits (635), Expect = 3.100e-66 Identity = 160/278 (57.55%), Postives = 181/278 (65.11%), Query Frame = 1
BLAST of Spo08497.1 vs. TAIR (Arabidopsis)
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein) HSP 1 Score: 232.6 bits (592), Expect = 3.000e-61 Identity = 149/279 (53.41%), Postives = 177/279 (63.44%), Query Frame = 1
BLAST of Spo08497.1 vs. TAIR (Arabidopsis)
Match: AT4G29080.1 (phytochrome-associated protein 2) HSP 1 Score: 217.2 bits (552), Expect = 1.300e-56 Identity = 142/291 (48.80%), Postives = 178/291 (61.17%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08497.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08497.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08497.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08497.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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