Spo08618 (gene)

Overview
NameSpo08618
Typegene
OrganismSpinacia oleracea (Spinach)
Descriptionprotein containing PDZ domain, a K-box domain, and a TPR region
Locationchr6 : 13626432 .. 13629276 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCCACAAGTAACAGTTGCGGGTACTCCCAACTATACCATTACCATTGTGATTACCGCGCTCTTAATAATCATGTGAATCACAATGTGATGAGGTCTCCTTCCCTATTTTCCAAGACTAAGCAGCTTTCGATTAATGGAACATCGCTGTCATCATCATTGTTATCCGGCCTCACTGTGTCTCGTGCACTGGTTAGCTACTGCTGCTGCAGGAGCAATAGCAGTAGCAATCCTAACAGCAACAGATACTGCAGGTTTGTAGTCAGAGCTACAGGAACTGATTCGTCATCACCCTCAGGCCAACAAGAAGATGAAGAACAAGAAGAAGAAAAGTATGAAGAGTATGAGGTGGAAATAGATCAGCCATTTGGATTGAAATTTGCCAAAGGAAGAGATGGAGCTACCTATATAGATGCGATAGCCCCAGGGTATTCTGCTGATAAAACAGGAAAGTTCAGTGTAGGGGATAAAGTCATAGCAACCAGTGCAGTGTTTGGCACAGAAATCTGGCCGGCTGCTGAGTATGGTAGAACCATGTATACCATCCGTCAGAGGATTGGTCCTCTCTTCATGAAAATGCAGAAGCGCTTTGGAAACCTTGATTATGCTGGTGAGTTGTCTGAGAAGGATATTATTCGCGCTGAAAGGAATTCTGGTTTTATCAGTGACCGTGTCAGAGAGATTCAAGTAAGCCAACCCAACCTCTCACCACACTACTTAGTACCTATATCATCTATTCATCTGTAAACTTATATTACAGTTTTTATTTCTTTGCAGCGCCAAAATTACCAGAGAAAGATGGAGACTAAACAAAGTAGGGAAAAGGACCTCCGGGAAGGCCTCCAACTTTACAAGTATTTATCAATCCATTCTTCTGTTTCCTGTTACTCAGCTGTTTAATTATGTTATTTCATCTTCTTTAATTTTCTTGTTTTTTATAACATCAAAGGAGCGGAAAATACGAGGAAGCACGAGAAAAGTTTGAATCTGTTCTAGGTTCTAGGCCTACTCCAAATGAAGCTTCAGTGGCTAGTTACAATGTTGCTTGTTGCTATTCTAAGCTTAATCAGGTATTACTCGTCTCCCTCAATCCTCTTCTTCCGATCCTCAGTTATTTTCTACTTTGGTTATTATGGGATATCCAACTATCAATTATGAGTACCCTGGTTGATGTGCTGACAATTATTTTTGTAACACAATCGAGCCTGAAATCAATAATACCCTGTAAAATACATTATATGTTCGTCTATATGTTAGATAGACTAACATTTAAGATGCTAACATTTAAGACTTGGACTAATGATGTATTGGCCTAGTGGTTAAGACTTTGGATCTGTGTACGATAGTTCTCAGTTTCGAATCCCCCTCCAGCCCTCCCACTAGAACACTTCCATGGACCTCTGTAAAATCCAGCAAAAGTTCTCGTGTTCTTTTCAGTTAGCTAATCAGATGCCCTTCAGTGTTATTCAAACTAATGCACTGCTAATGAAACAATATTGTAGCCTTGTCAGTAATTTCTGCAAGACCCCTAAGCAACAAAGAATAAAACCATTCACATTAGAGGCACCTTAGTTACCTAGCCCCTATTGACATCCAACAATCTAACCACCAGCATCGAACTGTAATGCAGTGAAATAAACATCAGCATCTAAAACACTCTCCATCTACCATGTATTTCAAATTTATCTAGAAATATGCCCTTATATTCGAAAATACAAATTATAAAATGTAAACAAGACATGATATTGCATTTAACATGTCACCCTTTGTCCATGTACAAGACATGATATTTACTTGCAATCAGATTACCTACAAAAGAAAACTTCCCTTAAAGCAACAACTAAGTCACACCTCTCCTAGTGCTTATAAGTTTATGACAGAATATGTAGAGCAACAGACTTTCATTGAAGACTACCATCAGAAGATGGAAGGTACAACTTGTCAGAAAAAATACAATCATGTATGAAATCACCCAAATCTTGATCTCGTGACACAAGCACTATGATAAATGTGCTAGATTTCTGAATTTACTTACCAATAAAAGCAAATTTACCGTAAAGAAACAAGTAAGCCTCGCCTCAATCTCCTACCTAGTGTTCACAAAGGTTATGGGTGAATGTAAATGGTCAGGAGATTGAAGCTGCAGCAAAAAGCATGTTTGTAATCACTCATATCTTGATCCCGTAACCAGCACTGGGAGAAATATGCTAGATTTTGATTTCTTGCTTCGCAGGCTTCAGTTTAGGGAATATTACTTTCTTTTTCTAAATAAATGCACCACTGTGATTCGATTGACAGATACAAGCTGGTCTATCTGCCCTTGAAGATGCTTTGAAATCAGGATATGAAGATTTCAAGGTGATACTACTTAACATGATTACTTTTATAAGTTTCCCCTTTCCGTGTCATTTCTGTCTTCAATTACAGTTGACAAGTGCATAGACACTTGACTAAATATTTTACTTTCCAAAACTTGTACAGAGAGTTCGAACTGATCCAGACCTCGCAAACCTCAGGGGAACTTCTGAGTTTAACACCCTAATGAATAGGTTCGATGAATCATTCATCAATGAAAATGCGATCAATGCCATTAAATCTCTCTTTGGATTCAACAAGTAGAAGGTCAATTTTGTAACACTTTATTTTTCATTACGGTTGGTTATGTATTTACACTGTTTGATAACACTAAAAAAGAGAGAAATTTGTCCTCTTACATTCATTTAACGAAGAGATACTTGCTTTGTTAAATTTTACTTCTTCTCTACCCTTTGCACCTTCTGTAGCCTTTAGGTTACAGCAATTGTCTATAAATTCAAATGCTACATAAACCAGTCAAACAGAG

mRNA sequence

ATGATGGCCACAAGTAACAGTTGCGGGTACTCCCAACTATACCATTACCATTGTGATTACCGCGCTCTTAATAATCATGTGAATCACAATGTGATGAGGTCTCCTTCCCTATTTTCCAAGACTAAGCAGCTTTCGATTAATGGAACATCGCTGTCATCATCATTGTTATCCGGCCTCACTGTGTCTCGTGCACTGGTTAGCTACTGCTGCTGCAGGAGCAATAGCAGTAGCAATCCTAACAGCAACAGATACTGCAGGTTTGTAGTCAGAGCTACAGGAACTGATTCGTCATCACCCTCAGGCCAACAAGAAGATGAAGAACAAGAAGAAGAAAAGTATGAAGAGTATGAGGTGGAAATAGATCAGCCATTTGGATTGAAATTTGCCAAAGGAAGAGATGGAGCTACCTATATAGATGCGATAGCCCCAGGGTATTCTGCTGATAAAACAGGAAAGTTCAGTGTAGGGGATAAAGTCATAGCAACCAGTGCAGTGTTTGGCACAGAAATCTGGCCGGCTGCTGAGTATGGTAGAACCATGTATACCATCCGTCAGAGGATTGGTCCTCTCTTCATGAAAATGCAGAAGCGCTTTGGAAACCTTGATTATGCTGGTGAGTTGTCTGAGAAGGATATTATTCGCGCTGAAAGGAATTCTGGTTTTATCAGTGACCGTGTCAGAGAGATTCAACGCCAAAATTACCAGAGAAAGATGGAGACTAAACAAAGTAGGGAAAAGGACCTCCGGGAAGGCCTCCAACTTTACAAGAGCGGAAAATACGAGGAAGCACGAGAAAAGTTTGAATCTGTTCTAGGTTCTAGGCCTACTCCAAATGAAGCTTCAGTGGCTAGTTACAATGTTGCTTGTTGCTATTCTAAGCTTAATCAGATACAAGCTGGTCTATCTGCCCTTGAAGATGCTTTGAAATCAGGATATGAAGATTTCAAGAGAGTTCGAACTGATCCAGACCTCGCAAACCTCAGGGGAACTTCTGAGTTTAACACCCTAATGAATAGGTTCGATGAATCATTCATCAATGAAAATGCGATCAATGCCATTAAATCTCTCTTTGGATTCAACAAGTAGAAGGTCAATTTTGTAACACTTTATTTTTCATTACGGTTGGTTATGTATTTACACTGTTTGATAACACTAAAAAAGAGAGAAATTTGTCCTCTTACATTCATTTAACGAAGAGATACTTGCTTTGTTAAATTTTACTTCTTCTCTACCCTTTGCACCTTCTGTAGCCTTTAGGTTACAGCAATTGTCTATAAATTCAAATGCTACATAAACCAGTCAAACAGAG

Coding sequence (CDS)

ATGATGGCCACAAGTAACAGTTGCGGGTACTCCCAACTATACCATTACCATTGTGATTACCGCGCTCTTAATAATCATGTGAATCACAATGTGATGAGGTCTCCTTCCCTATTTTCCAAGACTAAGCAGCTTTCGATTAATGGAACATCGCTGTCATCATCATTGTTATCCGGCCTCACTGTGTCTCGTGCACTGGTTAGCTACTGCTGCTGCAGGAGCAATAGCAGTAGCAATCCTAACAGCAACAGATACTGCAGGTTTGTAGTCAGAGCTACAGGAACTGATTCGTCATCACCCTCAGGCCAACAAGAAGATGAAGAACAAGAAGAAGAAAAGTATGAAGAGTATGAGGTGGAAATAGATCAGCCATTTGGATTGAAATTTGCCAAAGGAAGAGATGGAGCTACCTATATAGATGCGATAGCCCCAGGGTATTCTGCTGATAAAACAGGAAAGTTCAGTGTAGGGGATAAAGTCATAGCAACCAGTGCAGTGTTTGGCACAGAAATCTGGCCGGCTGCTGAGTATGGTAGAACCATGTATACCATCCGTCAGAGGATTGGTCCTCTCTTCATGAAAATGCAGAAGCGCTTTGGAAACCTTGATTATGCTGGTGAGTTGTCTGAGAAGGATATTATTCGCGCTGAAAGGAATTCTGGTTTTATCAGTGACCGTGTCAGAGAGATTCAACGCCAAAATTACCAGAGAAAGATGGAGACTAAACAAAGTAGGGAAAAGGACCTCCGGGAAGGCCTCCAACTTTACAAGAGCGGAAAATACGAGGAAGCACGAGAAAAGTTTGAATCTGTTCTAGGTTCTAGGCCTACTCCAAATGAAGCTTCAGTGGCTAGTTACAATGTTGCTTGTTGCTATTCTAAGCTTAATCAGATACAAGCTGGTCTATCTGCCCTTGAAGATGCTTTGAAATCAGGATATGAAGATTTCAAGAGAGTTCGAACTGATCCAGACCTCGCAAACCTCAGGGGAACTTCTGAGTTTAACACCCTAATGAATAGGTTCGATGAATCATTCATCAATGAAAATGCGATCAATGCCATTAAATCTCTCTTTGGATTCAACAAGTAG

Protein sequence

MMATSNSCGYSQLYHYHCDYRALNNHVNHNVMRSPSLFSKTKQLSINGTSLSSSLLSGLTVSRALVSYCCCRSNSSSNPNSNRYCRFVVRATGTDSSSPSGQQEDEEQEEEKYEEYEVEIDQPFGLKFAKGRDGATYIDAIAPGYSADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMETKQSREKDLREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAGLSALEDALKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFNK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08618.1Spo08618.1mRNA


Homology
[Close]
BLAST of Spo08618.1 vs. NCBI nr
Match: gi|902189244|gb|KNA11330.1| (hypothetical protein SOVF_136150 [Spinacia oleracea])

HSP 1 Score: 685.6 bits (1768), Expect = 4.500e-194
Identity = 355/361 (98.34%), Postives = 356/361 (98.61%), Query Frame = 1 

		  

Query: 1   MMATSNSCGYSQLYHYHCDYRALNNHVNHNVMRSPSLFSKTKQLSINGTSLSSSLLSGLT 60
           MMATSNSCGYSQLYHYHCDYRALNNHVNHNVMRSPSLFSKTKQLSINGTSLSSSLLSGLT
Sbjct: 1   MMATSNSCGYSQLYHYHCDYRALNNHVNHNVMRSPSLFSKTKQLSINGTSLSSSLLSGLT 60

Query: 61  VSRALVSYCCCRSNSSSNPNSNRYCRFVVRATGTDSSSPSGQQEDEEQEEEKYEEYEVEI 120
           VSRALVSYCCCRSNSSSNPNSNRYCRFVVRATGTDSSSPSGQQEDEEQEEEKYEEYEVEI
Sbjct: 61  VSRALVSYCCCRSNSSSNPNSNRYCRFVVRATGTDSSSPSGQQEDEEQEEEKYEEYEVEI 120

Query: 121 DQPFGLKFAKGRDGATYIDAIAPGYSADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTM 180
           DQPFGLKFAKGRDGATYIDAIAPGYSADKTGKF     +IATSAVFGTEIWPAAEYGRTM
Sbjct: 121 DQPFGLKFAKGRDGATYIDAIAPGYSADKTGKF-----IIATSAVFGTEIWPAAEYGRTM 180

Query: 181 YTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMET 240
           YTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMET
Sbjct: 181 YTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMET 240

Query: 241 KQSREKDLREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAG 300
           KQSREKDLREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAG
Sbjct: 241 KQSREKDLREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAG 300

Query: 301 LSALEDALKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFN 360
           LSALEDALKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFN
Sbjct: 301 LSALEDALKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFN 356

Query: 361 K 362
           K
Sbjct: 361 K 356
[Close]
BLAST of Spo08618.1 vs. NCBI nr
Match: gi|731325332|ref|XP_010673460.1| (PREDICTED: uncharacterized protein LOC104889834 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 508.4 bits (1308), Expect = 9.900e-141
Identity = 282/378 (74.60%), Postives = 310/378 (82.01%), Query Frame = 1 

		  

Query: 2   MATSNSCGYSQ--LYHYHCDYRALNNHVNHNVMRSPSLFSKTKQL--------------S 61
           MATSNSCGYSQ  LYHYHC Y        H+V  S SL  KTK                +
Sbjct: 1   MATSNSCGYSQAQLYHYHCRY--------HHVNLSHSLLFKTKPFISSAAATTCSSAITT 60

Query: 62  INGTSLSSSLLSGLTVSRALV-SYCCCRSNSSSNPNSNRYCRFVVRATGTDSSSPSGQQE 121
            NG+SL +      + SR LV +Y CCRSNSS N NS +Y RF+V+AT T+SSS   +QE
Sbjct: 61  DNGSSLHTQSPLLPSASRVLVKNYHCCRSNSSINSNSYKYSRFIVKATETNSSSSGSEQE 120

Query: 122 DEEQEEEKYEEYEVEIDQPFGLKFAKGRDGATYIDAIAPGYSADKTGKFSVGDKVIATSA 181
           ++E E   YEEYEVEI+QPFGLKFAKGRDGATYIDAIAPG+SADKTGKFSVGDKVIATSA
Sbjct: 121 EKEDE---YEEYEVEIEQPFGLKFAKGRDGATYIDAIAPGFSADKTGKFSVGDKVIATSA 180

Query: 182 VFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISD 241
           VFGTEIWPAAEYGRTMYTIRQRIGPL+MKM+KRFG LD++GE++EK+IIRAERN+GFIS+
Sbjct: 181 VFGTEIWPAAEYGRTMYTIRQRIGPLYMKMEKRFGKLDFSGEMTEKEIIRAERNAGFISN 240

Query: 242 RVREIQRQNYQRKMETKQSREKDLREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVAS 301
           RVREIQ QNYQRKME K  REKDLREGLQLYK+GKYEEAREKFESVLGS PTP+EASVAS
Sbjct: 241 RVREIQLQNYQRKMEQKDRREKDLREGLQLYKNGKYEEAREKFESVLGSGPTPDEASVAS 300

Query: 302 YNVACCYSKLNQIQAGLSALEDALKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESF 361
           YNVACCYS LNQIQAGLSALEDAL+SGYEDFKR+RTDPDLANLR T EF TLM RFDESF
Sbjct: 301 YNVACCYSNLNQIQAGLSALEDALESGYEDFKRIRTDPDLANLRTTDEFETLMKRFDESF 360
[Close]
BLAST of Spo08618.1 vs. NCBI nr
Match: gi|224073126|ref|XP_002303984.1| (hypothetical protein POPTR_0003s20890g [Populus trichocarpa])

HSP 1 Score: 426.0 bits (1094), Expect = 6.500e-116
Identity = 219/281 (77.94%), Postives = 246/281 (87.54%), Query Frame = 1 

		  

Query: 88  VVRATGTDS-------SSPSGQQEDEEQEEEKYEEYEVEIDQPFGLKFAKGRDGATYIDA 147
           +++A+ T+S       S   G+ E E + EEKYEEYEVEI+QP+G+KFAKGRDG+TYIDA
Sbjct: 63  ILKASETESQTSKSAESGSGGEGEGEGEGEEKYEEYEVEIEQPYGIKFAKGRDGSTYIDA 122

Query: 148 IAPGYSADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRFGN 207
           IAPG SADK GKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKR+GN
Sbjct: 123 IAPGGSADKNGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRYGN 182

Query: 208 LDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMETKQSREKDLREGLQLYKSGKY 267
           +DY GEL+EK+IIRAERNSG IS+RVREIQ QNY RK E K+ REKDLREGLQLYK+ KY
Sbjct: 183 MDYTGELTEKEIIRAERNSGVISNRVREIQMQNYLRKKEQKEQREKDLREGLQLYKNAKY 242

Query: 268 EEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAGLSALEDALKSGYEDFKRVRT 327
           EEA EKFES+LGS+P P EA+VASYNVACCYSKLNQ+QAGLSALEDA+K+G+EDFKR+RT
Sbjct: 243 EEALEKFESMLGSKPDPTEAAVASYNVACCYSKLNQLQAGLSALEDAMKAGFEDFKRIRT 302

Query: 328 DPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFNK 362
           DPDL+NLR    F  LM RFDESFINENAINAIKSLFGFNK
Sbjct: 303 DPDLSNLRTAEGFEPLMKRFDESFINENAINAIKSLFGFNK 343
[Close]
BLAST of Spo08618.1 vs. NCBI nr
Match: gi|802659250|ref|XP_012080818.1| (PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas])

HSP 1 Score: 421.4 bits (1082), Expect = 1.600e-114
Identity = 222/294 (75.51%), Postives = 251/294 (85.37%), Query Frame = 1 

		  

Query: 73  SNSSSNPNSNRYCRFVVRATGTDSSSP---SGQQ--EDEEQEEEKYEEYEVEIDQPFGLK 132
           S S SN +  +     V A+ T+S +P   SG +  E+E + EEKYEEYEVEI+QP+GLK
Sbjct: 49  STSLSNTHLLKNSNLTVNASETESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLK 108

Query: 133 FAKGRDGATYIDAIAPGYSADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRI 192
           FAKGRDG TYIDAIAPG SADKTG FSVGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRI
Sbjct: 109 FAKGRDGGTYIDAIAPGGSADKTGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRI 168

Query: 193 GPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMETKQSREKD 252
           GPL M+MQKR+G LDYAGEL+EK+IIRAERNSG +S+RVREIQ QNY RK E K  RE D
Sbjct: 169 GPLLMRMQKRYGKLDYAGELTEKEIIRAERNSGVVSNRVREIQMQNYLRKKEQKAQREND 228

Query: 253 LREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAGLSALEDA 312
           LREGLQLYK+ KYEEA EKFESVLGS+P P EA+VASYNVACCYSKLNQ++AGLSALEDA
Sbjct: 229 LREGLQLYKAAKYEEALEKFESVLGSKPEPMEAAVASYNVACCYSKLNQLKAGLSALEDA 288

Query: 313 LKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFNK 362
           +++G+EDFKR+RTDPDLANLR + EF  L+ RFDESFINENAINAIKSLFGFNK
Sbjct: 289 MQAGFEDFKRIRTDPDLANLRTSEEFEPLLKRFDESFINENAINAIKSLFGFNK 342
[Close]
BLAST of Spo08618.1 vs. NCBI nr
Match: gi|743835876|ref|XP_011025128.1| (PREDICTED: uncharacterized protein LOC105126081 [Populus euphratica])

HSP 1 Score: 419.5 bits (1077), Expect = 6.100e-114
Identity = 232/335 (69.25%), Postives = 265/335 (79.10%), Query Frame = 1 

		  

Query: 33  RSPSLFSKTKQLSINGTSLSSSLLSG-----LTVSRALVSYCCCRSNSSSNPNSNRYCRF 92
           R PSL+S +   + +  +    LL       L+ + + +S     SN+     SN   + 
Sbjct: 7   RYPSLYSSSPLPTSSVQAKQIPLLFSQNTHFLSKNYSFLSTSTAFSNTLLLKPSNSILKA 66

Query: 93  VVRATGTDSSSPSGQQ-EDEEQEEEKYEEYEVEIDQPFGLKFAKGRDGATYIDAIAPGYS 152
               + T  S+ SG   E E + EEKYEEYEVEI+QP+G+KFAKGRDGATYIDAIAPG S
Sbjct: 67  SETESQTSKSAESGSGGEGEGEGEEKYEEYEVEIEQPYGIKFAKGRDGATYIDAIAPGGS 126

Query: 153 ADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRFGNLDYAGE 212
           ADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPL MKMQKR+GN+DY GE
Sbjct: 127 ADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGNMDYTGE 186

Query: 213 LSEKDIIRAERNSGFISDRVREIQRQNYQRKMETKQSREKDLREGLQLYKSGKYEEAREK 272
           L+EK+IIRAERNSG IS+RVREIQ QNY RK E K+ REKDLREGLQLYK+ KYEEA EK
Sbjct: 187 LTEKEIIRAERNSGVISNRVREIQMQNYIRKKEQKEQREKDLREGLQLYKNAKYEEALEK 246

Query: 273 FESVLGSRPTPNEASVASYNVACCYSKLNQIQAGLSALEDALKSGYEDFKRVRTDPDLAN 332
           FES+LGS+P P EA+VASYNVACCYSKLNQ+QAGLSALEDA+K+G+EDFKR+RTDPDL+N
Sbjct: 247 FESMLGSKPDPTEAAVASYNVACCYSKLNQLQAGLSALEDAMKAGFEDFKRIRTDPDLSN 306

Query: 333 LRGTSEFNTLMNRFDESFINENAINAIKSLFGFNK 362
           LR    F  LM RFDESFINENAINAIKSLFGFNK
Sbjct: 307 LRTAEGFEPLMKRFDESFINENAINAIKSLFGFNK 341
[Close]
BLAST of Spo08618.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVP9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136150 PE=4 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 3.200e-194
Identity = 355/361 (98.34%), Postives = 356/361 (98.61%), Query Frame = 1 

		  

Query: 1   MMATSNSCGYSQLYHYHCDYRALNNHVNHNVMRSPSLFSKTKQLSINGTSLSSSLLSGLT 60
           MMATSNSCGYSQLYHYHCDYRALNNHVNHNVMRSPSLFSKTKQLSINGTSLSSSLLSGLT
Sbjct: 1   MMATSNSCGYSQLYHYHCDYRALNNHVNHNVMRSPSLFSKTKQLSINGTSLSSSLLSGLT 60

Query: 61  VSRALVSYCCCRSNSSSNPNSNRYCRFVVRATGTDSSSPSGQQEDEEQEEEKYEEYEVEI 120
           VSRALVSYCCCRSNSSSNPNSNRYCRFVVRATGTDSSSPSGQQEDEEQEEEKYEEYEVEI
Sbjct: 61  VSRALVSYCCCRSNSSSNPNSNRYCRFVVRATGTDSSSPSGQQEDEEQEEEKYEEYEVEI 120

Query: 121 DQPFGLKFAKGRDGATYIDAIAPGYSADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTM 180
           DQPFGLKFAKGRDGATYIDAIAPGYSADKTGKF     +IATSAVFGTEIWPAAEYGRTM
Sbjct: 121 DQPFGLKFAKGRDGATYIDAIAPGYSADKTGKF-----IIATSAVFGTEIWPAAEYGRTM 180

Query: 181 YTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMET 240
           YTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMET
Sbjct: 181 YTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMET 240

Query: 241 KQSREKDLREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAG 300
           KQSREKDLREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAG
Sbjct: 241 KQSREKDLREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAG 300

Query: 301 LSALEDALKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFN 360
           LSALEDALKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFN
Sbjct: 301 LSALEDALKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFN 356

Query: 361 K 362
           K
Sbjct: 361 K 356
[Close]
BLAST of Spo08618.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CLD1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g070870 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 6.900e-141
Identity = 282/378 (74.60%), Postives = 310/378 (82.01%), Query Frame = 1 

		  

Query: 2   MATSNSCGYSQ--LYHYHCDYRALNNHVNHNVMRSPSLFSKTKQL--------------S 61
           MATSNSCGYSQ  LYHYHC Y        H+V  S SL  KTK                +
Sbjct: 1   MATSNSCGYSQAQLYHYHCRY--------HHVNLSHSLLFKTKPFISSAAATTCSSAITT 60

Query: 62  INGTSLSSSLLSGLTVSRALV-SYCCCRSNSSSNPNSNRYCRFVVRATGTDSSSPSGQQE 121
            NG+SL +      + SR LV +Y CCRSNSS N NS +Y RF+V+AT T+SSS   +QE
Sbjct: 61  DNGSSLHTQSPLLPSASRVLVKNYHCCRSNSSINSNSYKYSRFIVKATETNSSSSGSEQE 120

Query: 122 DEEQEEEKYEEYEVEIDQPFGLKFAKGRDGATYIDAIAPGYSADKTGKFSVGDKVIATSA 181
           ++E E   YEEYEVEI+QPFGLKFAKGRDGATYIDAIAPG+SADKTGKFSVGDKVIATSA
Sbjct: 121 EKEDE---YEEYEVEIEQPFGLKFAKGRDGATYIDAIAPGFSADKTGKFSVGDKVIATSA 180

Query: 182 VFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISD 241
           VFGTEIWPAAEYGRTMYTIRQRIGPL+MKM+KRFG LD++GE++EK+IIRAERN+GFIS+
Sbjct: 181 VFGTEIWPAAEYGRTMYTIRQRIGPLYMKMEKRFGKLDFSGEMTEKEIIRAERNAGFISN 240

Query: 242 RVREIQRQNYQRKMETKQSREKDLREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVAS 301
           RVREIQ QNYQRKME K  REKDLREGLQLYK+GKYEEAREKFESVLGS PTP+EASVAS
Sbjct: 241 RVREIQLQNYQRKMEQKDRREKDLREGLQLYKNGKYEEAREKFESVLGSGPTPDEASVAS 300

Query: 302 YNVACCYSKLNQIQAGLSALEDALKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESF 361
           YNVACCYS LNQIQAGLSALEDAL+SGYEDFKR+RTDPDLANLR T EF TLM RFDESF
Sbjct: 301 YNVACCYSNLNQIQAGLSALEDALESGYEDFKRIRTDPDLANLRTTDEFETLMKRFDESF 360
[Close]
BLAST of Spo08618.1 vs. UniProtKB/TrEMBL
Match: B9GXY1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s20890g PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 4.500e-116
Identity = 219/281 (77.94%), Postives = 246/281 (87.54%), Query Frame = 1 

		  

Query: 88  VVRATGTDS-------SSPSGQQEDEEQEEEKYEEYEVEIDQPFGLKFAKGRDGATYIDA 147
           +++A+ T+S       S   G+ E E + EEKYEEYEVEI+QP+G+KFAKGRDG+TYIDA
Sbjct: 63  ILKASETESQTSKSAESGSGGEGEGEGEGEEKYEEYEVEIEQPYGIKFAKGRDGSTYIDA 122

Query: 148 IAPGYSADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRFGN 207
           IAPG SADK GKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKR+GN
Sbjct: 123 IAPGGSADKNGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRYGN 182

Query: 208 LDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMETKQSREKDLREGLQLYKSGKY 267
           +DY GEL+EK+IIRAERNSG IS+RVREIQ QNY RK E K+ REKDLREGLQLYK+ KY
Sbjct: 183 MDYTGELTEKEIIRAERNSGVISNRVREIQMQNYLRKKEQKEQREKDLREGLQLYKNAKY 242

Query: 268 EEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAGLSALEDALKSGYEDFKRVRT 327
           EEA EKFES+LGS+P P EA+VASYNVACCYSKLNQ+QAGLSALEDA+K+G+EDFKR+RT
Sbjct: 243 EEALEKFESMLGSKPDPTEAAVASYNVACCYSKLNQLQAGLSALEDAMKAGFEDFKRIRT 302

Query: 328 DPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFNK 362
           DPDL+NLR    F  LM RFDESFINENAINAIKSLFGFNK
Sbjct: 303 DPDLSNLRTAEGFEPLMKRFDESFINENAINAIKSLFGFNK 343
[Close]
BLAST of Spo08618.1 vs. UniProtKB/TrEMBL
Match: A0A067K3A5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.100e-114
Identity = 222/294 (75.51%), Postives = 251/294 (85.37%), Query Frame = 1 

		  

Query: 73  SNSSSNPNSNRYCRFVVRATGTDSSSP---SGQQ--EDEEQEEEKYEEYEVEIDQPFGLK 132
           S S SN +  +     V A+ T+S +P   SG +  E+E + EEKYEEYEVEI+QP+GLK
Sbjct: 49  STSLSNTHLLKNSNLTVNASETESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLK 108

Query: 133 FAKGRDGATYIDAIAPGYSADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRI 192
           FAKGRDG TYIDAIAPG SADKTG FSVGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRI
Sbjct: 109 FAKGRDGGTYIDAIAPGGSADKTGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRI 168

Query: 193 GPLFMKMQKRFGNLDYAGELSEKDIIRAERNSGFISDRVREIQRQNYQRKMETKQSREKD 252
           GPL M+MQKR+G LDYAGEL+EK+IIRAERNSG +S+RVREIQ QNY RK E K  RE D
Sbjct: 169 GPLLMRMQKRYGKLDYAGELTEKEIIRAERNSGVVSNRVREIQMQNYLRKKEQKAQREND 228

Query: 253 LREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAGLSALEDA 312
           LREGLQLYK+ KYEEA EKFESVLGS+P P EA+VASYNVACCYSKLNQ++AGLSALEDA
Sbjct: 229 LREGLQLYKAAKYEEALEKFESVLGSKPEPMEAAVASYNVACCYSKLNQLKAGLSALEDA 288

Query: 313 LKSGYEDFKRVRTDPDLANLRGTSEFNTLMNRFDESFINENAINAIKSLFGFNK 362
           +++G+EDFKR+RTDPDLANLR + EF  L+ RFDESFINENAINAIKSLFGFNK
Sbjct: 289 MQAGFEDFKRIRTDPDLANLRTSEEFEPLLKRFDESFINENAINAIKSLFGFNK 342
[Close]
BLAST of Spo08618.1 vs. UniProtKB/TrEMBL
Match: A0A067ETB8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019871mg PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.600e-113
Identity = 210/272 (77.21%), Postives = 240/272 (88.24%), Query Frame = 1 

		  

Query: 87  FVVRATGTDSSSPSGQQEDEEQEEEKYEEYEVEIDQPFGLKFAKGRDGATYIDAIAPGYS 146
           FV +A+ T++ +    +   E++EEKYEEYEVEI+QP+GLKFAKGRDG TYIDAIAPG S
Sbjct: 58  FVAKASETEAQASPEAESGSEEQEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGS 117

Query: 147 ADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRFGNLDYAGE 206
           ADKTG F VGDKV+ATSAVFGTEIWPAAEYGRTMYTIRQR+GPL MKMQKR+G ++  GE
Sbjct: 118 ADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYGKMEQTGE 177

Query: 207 LSEKDIIRAERNSGFISDRVREIQRQNYQRKMETKQSREKDLREGLQLYKSGKYEEAREK 266
           LSEK+IIRAERNSG IS+RVREIQ QNY +K E K+ RE+DLREGLQLY++GKYE AREK
Sbjct: 178 LSEKEIIRAERNSGVISNRVREIQMQNYMKKKEQKERREQDLREGLQLYRTGKYEVAREK 237

Query: 267 FESVLGSRPTPNEASVASYNVACCYSKLNQIQAGLSALEDALKSGYEDFKRVRTDPDLAN 326
           FESVLGS+PTP E+SVASYNVACCYSKLNQ++AGLSALEDAL +GYEDFKRVRTDPDL N
Sbjct: 238 FESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFKRVRTDPDLEN 297

Query: 327 LRGTSEFNTLMNRFDESFINENAINAIKSLFG 359
           LR + EF+ L+ RFDESFINENAINAIKSLFG
Sbjct: 298 LRASEEFDVLLKRFDESFINENAINAIKSLFG 329
[Close]
BLAST of Spo08618.1 vs. ExPASy Swiss-Prot
Match: LPA1_ARATH (Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.300e-7
Identity = 31/89 (34.83%), Postives = 47/89 (52.81%), Query Frame = 1 

		  

Query: 248 LREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAGLSALEDA 307
           +  GL L+K G+ ++A  +FE+ L   P P E+  A YN ACC++   + +  +  L  A
Sbjct: 79  VNTGLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIA 138

Query: 308 LKSGYEDFKRVRTDPDLANLRGTSEFNTL 337
           L+     F  +  DPDLA+ R   EF  L
Sbjct: 139 LRDYNLKFATILNDPDLASFRALPEFKEL 167
[Close]
BLAST of Spo08618.1 vs. TAIR (Arabidopsis)
Match: AT1G55480.1 (protein containing PDZ domain, a K-box domain, and a TPR region)

HSP 1 Score: 396.7 bits (1018), Expect = 1.500e-110
Identity = 214/327 (65.44%), Postives = 256/327 (78.29%), Query Frame = 1 

		  

Query: 35  PSLFSKTKQLSINGTSLSSSLLSGLTVSRALVSYCCCRSNSSSNPNSNRYCRFVVRATGT 94
           PSL+S         T  + SL++  +   A   +    S S  N +  +     ++A+ T
Sbjct: 9   PSLYSSPSLPRTQQTKQNPSLITQSSFISAKSLFLSSNSASLCNTHVAKRRNLALKASET 68

Query: 95  DSSSPSGQQEDEEQEEEKYEEYEVEIDQPFGLKFAKGRDGATYIDAIAPGYSADKTGKFS 154
           +SS+ +    D E EEEKYE YE+E++QP+GLKF KGRDG TYIDAI PG SADKTGKF+
Sbjct: 69  ESSAKAEAGGDGE-EEEKYETYEIEVEQPYGLKFRKGRDGGTYIDAILPGGSADKTGKFT 128

Query: 155 VGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRFGNLDYAGELSEKDIIR 214
           VGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPL M+M+KR G  +  GEL+EK+IIR
Sbjct: 129 VGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMQMEKRNGKAEDTGELTEKEIIR 188

Query: 215 AERNSGFISDRVREIQRQNYQRKMETKQSREKDLREGLQLYKSGKYEEAREKFESVLGSR 274
           AERN+G+IS R+REIQ QNY +K E K  REKDLREGLQ  K+GKYEEA E+FESVLGS+
Sbjct: 189 AERNAGYISSRLREIQMQNYLKKKEQKAQREKDLREGLQFSKNGKYEEALERFESVLGSK 248

Query: 275 PTPNEASVASYNVACCYSKLNQIQAGLSALEDALKSGYEDFKRVRTDPDLANLRGTSEFN 334
           PTP EASVASYNVACCYSKLNQ+QAGLSALE+ALKSGYEDFKR+R+DPDL  LR + +F+
Sbjct: 249 PTPEEASVASYNVACCYSKLNQVQAGLSALEEALKSGYEDFKRIRSDPDLETLRKSKDFD 308

Query: 335 TLMNRFDESFINENAINAIKSLFGFNK 362
            L+ +FDESFINE+AINAIKSLFGFNK
Sbjct: 309 PLLKQFDESFINESAINAIKSLFGFNK 334
[Close]
BLAST of Spo08618.1 vs. TAIR (Arabidopsis)
Match: AT1G02910.1 (tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 58.9 bits (141), Expect = 7.300e-9
Identity = 31/89 (34.83%), Postives = 47/89 (52.81%), Query Frame = 1 

		  

Query: 248 LREGLQLYKSGKYEEAREKFESVLGSRPTPNEASVASYNVACCYSKLNQIQAGLSALEDA 307
           +  GL L+K G+ ++A  +FE+ L   P P E+  A YN ACC++   + +  +  L  A
Sbjct: 79  VNTGLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIA 138

Query: 308 LKSGYEDFKRVRTDPDLANLRGTSEFNTL 337
           L+     F  +  DPDLA+ R   EF  L
Sbjct: 139 LRDYNLKFATILNDPDLASFRALPEFKEL 167
[Close]
BLAST of Spo08618.1 vs. TAIR (Arabidopsis)
Match: AT5G17170.1 (rubredoxin family protein)

HSP 1 Score: 53.1 bits (126), Expect = 4.000e-7
Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 1 

		  

Query: 117 EVEIDQPFGLKFAKGRDGATYIDAIAPGYSADKTGKFSVGDKVIATSAVFGTEIWPAAEY 176
           EVE+D+P GL   + + G   I  +  G +A K G  S GD+V+ TS+ FG E+WPA + 
Sbjct: 87  EVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKS-GDQVVYTSSFFGDELWPADKL 146

Query: 177 GRTMYTIRQR 187
           G T   I+ +
Sbjct: 147 GFTKTAIQAK 155
[Close]
BLAST of Spo08618.1 vs. TAIR (Arabidopsis)
Match: AT3G01510.1 (like SEX4 1)

HSP 1 Score: 49.7 bits (117), Expect = 4.500e-6
Identity = 36/144 (25.00%), Postives = 64/144 (44.44%), Query Frame = 1 

		  

Query: 82  NRYCRFVVRATGTDSSSPSGQQEDEEQEEEKYEEYEVEIDQPFGLKFAKGRDGATYIDAI 141
           NR  R V+R     SSS   +            EY V +++P G++FA   DG  ++ AI
Sbjct: 51  NRRRRVVLRVVAMSSSSTPFKMN--------LNEYMVTLEKPLGIRFALSADGKIFVHAI 110

Query: 142 APGYSADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLFMKMQKRFG-- 201
             G +A+K     VGD +   S   G  +    ++G T   + ++ G   + +++ F   
Sbjct: 111 KKGSNAEKARIIMVGDTLKKASDSSGGTLVEIKDFGDTKKMLVEKTGSFSLVLERPFSPF 170

Query: 202 NLDYAGELSEKDIIRAERNSGFIS 224
            + Y   LS+ D++       F++
Sbjct: 171 PIQYLLHLSDLDLLYNRGRVSFVT 186
The following BLAST results are available for this feature:
BLAST of Spo08618.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902189244|gb|KNA11330.1|4.5e-19498.3hypothetical protein SOVF_1361... [more]
gi|731325332|ref|XP_010673460.1|9.9e-14174.6PREDICTED: uncharacterized pro... [more]
gi|224073126|ref|XP_002303984.1|6.5e-11677.9hypothetical protein POPTR_000... [more]
gi|802659250|ref|XP_012080818.1|1.6e-11475.5PREDICTED: uncharacterized pro... [more]
gi|743835876|ref|XP_011025128.1|6.1e-11469.2PREDICTED: uncharacterized pro... [more]
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BLAST of Spo08618.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QVP9_SPIOL3.2e-19498.3Uncharacterized protein OS=Spi... [more]
A0A0J8CLD1_BETVU6.9e-14174.6Uncharacterized protein OS=Bet... [more]
B9GXY1_POPTR4.5e-11677.9Uncharacterized protein OS=Pop... [more]
A0A067K3A5_JATCU1.1e-11475.5Uncharacterized protein OS=Jat... [more]
A0A067ETB8_CITSI1.6e-11377.2Uncharacterized protein OS=Cit... [more]
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BLAST of Spo08618.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LPA1_ARATH1.3e-734.8Protein LOW PSII ACCUMULATION ... [more]
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BLAST of Spo08618.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G55480.11.5e-11065.4protein containing PDZ domain,... [more]
AT1G02910.17.3e-934.8tetratricopeptide repeat (TPR)... [more]
AT5G17170.14.0e-740.0rubredoxin family protein[more]
AT3G01510.14.5e-625.0like SEX4 1[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainGENE3D2.30.42.10coord: 99..161
score: 2.
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 249..310
score: 1.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 248..311
score: 9.8
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 244..314
score: 8
NoneNo IPR availablePANTHERPTHR17130MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25coord: 97..361
score: 1.2E
NoneNo IPR availablePANTHERPTHR17130:SF24GANcoord: 97..361
score: 1.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0006810 transport
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005758 mitochondrial intermembrane space
cellular_component GO:0070469 respiratory chain
molecular_function GO:0005506 iron ion binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0020037 heme binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016772 transferase activity, transferring phosphorus-containing groups
molecular_function GO:0005515 protein binding
molecular_function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity
RNA-Seq Expression