Spo08653 (gene) | SpinachBase

Overview


Name	Spo08653
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Zinc ion-binding protein
Location	chr2 : 46756978 .. 46757932 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATCGATACGCCGACTCATATCCCATTTCTTGTTTTTCTTTTTGGTTCTCTTCTCTCTCTTACTCACTCTCCTTTCTCAACCACTCAGTTGTTTCTCTCTCCTAAAAACAATGGCGGATCAAGATCGAGTATGCTGCATGTGTGGTGATATTGGCTTCGCTGACAAGCTCTTCCAGTGCTCCCGTTGTCGCTTTCGCTTCCAACACCTGTATGTTCTCCTCTTTTTCTCCTTGTCGAGCTTGCAGTGTTCTTTTTTATATATATAAAGCTCTGATAATAAATATGTATATAAGGCTCTGATTTCATGTTTGATACACAGATATTGTAGCAACTACAACTACGGCAAACAGGAATTACTATTATCACCATCATTCTCATCGTCGTCATCATCATCAACCAACACAAAATCGTTAGAGTTATGCGATTGGTGTCAGAGTGAAGGAAAAAACTCCTCAACAACCAACAAACATCAAAGTGGATCTTACAAGAGATCATTATCGTCGTCATCATCGTCGTCATCAATGGATCATCGTAATAATAATAGTCTTCATATCCGTTCTGAATATGCGTCAGGAGAGAGAATCAAGCAACATCAAGATCAACAACAAAACGGCGCCGCTTCTTCTGGAACTCCCAAAAACTCCGGCGTACCGTCGCCTCGCCCGAATGCCCATCGTCGCTACAAACTTCTCAAGGATGTCATGTGTTGATCAAGTGACTTAGCTAGCTTTGTGGTGGATCTTCCTAAAAGTTGTAAGCTAATTAAGGTTTTGTGTTTGCGTGTGTTAGCTAGCTTTTTACTTTTTAATCATGACGAGTCTTTGTCTTAGTGTGAATATTATGTTTAATTAGAGAACCTTCATCTTAATTAAAACCTCTTTTATTTTTTATATATAATATGTAAAAATATTATGTCTAGATATATTTATGCTATGGAATTGCTCTCCTTTTCCC

mRNA sequence

AGATCGATACGCCGACTCATATCCCATTTCTTGTTTTTCTTTTTGGTTCTCTTCTCTCTCTTACTCACTCTCCTTTCTCAACCACTCAGTTGTTTCTCTCTCCTAAAAACAATGGCGGATCAAGATCGAGTATGCTGCATGTGTGGTGATATTGGCTTCGCTGACAAGCTCTTCCAGTGCTCCCGTTGTCGCTTTCGCTTCCAACACCTATATTGTAGCAACTACAACTACGGCAAACAGGAATTACTATTATCACCATCATTCTCATCGTCGTCATCATCATCAACCAACACAAAATCGTTAGAGTTATGCGATTGGTGTCAGAGTGAAGGAAAAAACTCCTCAACAACCAACAAACATCAAAGTGGATCTTACAAGAGATCATTATCGTCGTCATCATCGTCGTCATCAATGGATCATCGTAATAATAATAGTCTTCATATCCGTTCTGAATATGCGTCAGGAGAGAGAATCAAGCAACATCAAGATCAACAACAAAACGGCGCCGCTTCTTCTGGAACTCCCAAAAACTCCGGCGTACCGTCGCCTCGCCCGAATGCCCATCGTCGCTACAAACTTCTCAAGGATGTCATGTGTTGATCAAGTGACTTAGCTAGCTTTGTGGTGGATCTTCCTAAAAGTTGTAAGCTAATTAAGGTTTTGTGTTTGCGTGTGTTAGCTAGCTTTTTACTTTTTAATCATGACGAGTCTTTGTCTTAGTGTGAATATTATGTTTAATTAGAGAACCTTCATCTTAATTAAAACCTCTTTTATTTTTTATATATAATATGTAAAAATATTATGTCTAGATATATTTATGCTATGGAATTGCTCTCCTTTTCCC

Coding sequence (CDS)

ATGGCGGATCAAGATCGAGTATGCTGCATGTGTGGTGATATTGGCTTCGCTGACAAGCTCTTCCAGTGCTCCCGTTGTCGCTTTCGCTTCCAACACCTATATTGTAGCAACTACAACTACGGCAAACAGGAATTACTATTATCACCATCATTCTCATCGTCGTCATCATCATCAACCAACACAAAATCGTTAGAGTTATGCGATTGGTGTCAGAGTGAAGGAAAAAACTCCTCAACAACCAACAAACATCAAAGTGGATCTTACAAGAGATCATTATCGTCGTCATCATCGTCGTCATCAATGGATCATCGTAATAATAATAGTCTTCATATCCGTTCTGAATATGCGTCAGGAGAGAGAATCAAGCAACATCAAGATCAACAACAAAACGGCGCCGCTTCTTCTGGAACTCCCAAAAACTCCGGCGTACCGTCGCCTCGCCCGAATGCCCATCGTCGCTACAAACTTCTCAAGGATGTCATGTGTTGA

Protein sequence

MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTNTKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGERIKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo08653.1	Spo08653.1	mRNA

Homology

[Close]

BLAST of Spo08653.1 vs. NCBI nr
Match: gi|902209161|gb|KNA16118.1| (hypothetical protein SOVF_092080 [Spinacia oleracea])

HSP 1 Score: 318.2 bits (814), Expect = 8.500e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60
           MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN
Sbjct: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60

Query: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120
           TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER
Sbjct: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120

Query: 121 IKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC 163
           IKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC
Sbjct: 121 IKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC 162

[Close]

BLAST of Spo08653.1 vs. NCBI nr
Match: gi|731361016|ref|XP_010692130.1| (PREDICTED: uncharacterized protein DDB_G0271670 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 186.4 bits (472), Expect = 3.900e-44
Identity = 115/181 (63.54%), Postives = 127/181 (70.17%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60
           MADQDRVCCMCGDIGFADKLFQC  CRFRFQHLYCSNY  G +EL    S SSSSSSS+ 
Sbjct: 1   MADQDRVCCMCGDIGFADKLFQCPGCRFRFQHLYCSNYYSGNREL----SSSSSSSSSS- 60

Query: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120
                +CDWC+SEG+NSST    ++GS+KR    SSSSSSM+H N+ +LHI SEY SGER
Sbjct: 61  -----ICDWCRSEGRNSST----KTGSFKR----SSSSSSMEHNNHRNLHISSEYTSGER 120

Query: 121 IKQHQDQ-----------QQNGAASS----GTPK----NSGVPSPRPNAHRRYKLLKDVM 163
           IKQHQ Q             N  A S    GT K    NSGVPSPRP+AHRRYKLLKDVM
Sbjct: 121 IKQHQHQDHLNTSTTTTNNNNSVAVSSGERGTSKNNNNNSGVPSPRPSAHRRYKLLKDVM 163

[Close]

BLAST of Spo08653.1 vs. NCBI nr
Match: gi|823208044|ref|XP_012437521.1| (PREDICTED: uncharacterized protein LOC105763733 isoform X2 [Gossypium raimondii])

HSP 1 Score: 121.3 bits (303), Expect = 1.500e-24
Identity = 77/162 (47.53%), Postives = 93/162 (57.41%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60
           M D   VCCMCGD+GF+DK+F+C++CR RFQH YCSNY                   S  
Sbjct: 1   MVDYQTVCCMCGDVGFSDKIFRCNKCRHRFQHSYCSNYY------------------SEF 60

Query: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120
            + +ELCDWC+SE +NS    KH S S K         S + +RN   +  RSEY SG++
Sbjct: 61  AEPIELCDWCRSEERNS----KHGSFSKK---------SPLMNRNETGIVNRSEY-SGDK 120

Query: 121 IKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC 163
           IKQH D  Q+     G  KN G PSPRP   RRYKLLKDVMC
Sbjct: 121 IKQHNDDHQHEHHHRG--KNGGTPSPRPTT-RRYKLLKDVMC 127

[Close]

BLAST of Spo08653.1 vs. NCBI nr
Match: gi|728818796|gb|KHG02921.1| (Zinc finger protein [Gossypium arboreum])

HSP 1 Score: 119.4 bits (298), Expect = 5.800e-24
Identity = 79/172 (45.93%), Postives = 97/172 (56.40%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQ----------HLYCSNYNYGKQELLLSPS 60
           M D+  VCCMCGD+GF+DKLF+C++CR+RFQ          H+YCSNY            
Sbjct: 1   MVDRQTVCCMCGDVGFSDKLFRCNKCRYRFQHSYALSSFHHHMYCSNY------------ 60

Query: 61  FSSSSSSSTNTKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLH 120
                  S   + +ELCDWC+SE +NS    KH          SSS  S + +RN   + 
Sbjct: 61  ------YSEFAEPIELCDWCRSEERNS----KH---------GSSSKKSPLMNRNETGIV 120

Query: 121 IRSEYASGERIKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC 163
            RSEY SG++IKQH D  Q+     G  KNSG PSPRP   RRYKLLKDVMC
Sbjct: 121 NRSEY-SGDKIKQHNDDHQHEHHHRG--KNSGTPSPRPTT-RRYKLLKDVMC 137

[Close]

BLAST of Spo08653.1 vs. NCBI nr
Match: gi|566202783|ref|XP_006375260.1| (hypothetical protein POPTR_0014s05730g [Populus trichocarpa])

HSP 1 Score: 118.6 bits (296), Expect = 9.900e-24
Identity = 75/163 (46.01%), Postives = 94/163 (57.67%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60
           M D   VCCMCGD+GF DKLF+C++CR RFQHLYCSNY YG+        FS        
Sbjct: 1   MVDIQTVCCMCGDVGFPDKLFRCNKCRNRFQHLYCSNY-YGE--------FS-------- 60

Query: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120
            + +E CDWCQSE +N+   N             SS  S  +H +   +  RSEY+   +
Sbjct: 61  -EPIEQCDWCQSEERNARHGN-------------SSKKSGAEHDSGTLVTKRSEYSGDHK 120

Query: 121 IKQHQDQQQNGAASSGTPKN-SGVPSPRPNAHRRYKLLKDVMC 163
           IKQH  ++ +  +S    KN SG+PSPRP   RRYKLLKDVMC
Sbjct: 121 IKQHDREENSTTSSDQKGKNPSGIPSPRPTT-RRYKLLKDVMC 131

[Close]

BLAST of Spo08653.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9D1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_092080 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.000e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60
           MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN
Sbjct: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60

Query: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120
           TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER
Sbjct: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120

Query: 121 IKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC 163
           IKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC
Sbjct: 121 IKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC 162

[Close]

BLAST of Spo08653.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIV3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018390 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.700e-44
Identity = 115/181 (63.54%), Postives = 127/181 (70.17%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60
           MADQDRVCCMCGDIGFADKLFQC  CRFRFQHLYCSNY  G +EL    S SSSSSSS+ 
Sbjct: 1   MADQDRVCCMCGDIGFADKLFQCPGCRFRFQHLYCSNYYSGNREL----SSSSSSSSSS- 60

Query: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120
                +CDWC+SEG+NSST    ++GS+KR    SSSSSSM+H N+ +LHI SEY SGER
Sbjct: 61  -----ICDWCRSEGRNSST----KTGSFKR----SSSSSSMEHNNHRNLHISSEYTSGER 120

Query: 121 IKQHQDQ-----------QQNGAASS----GTPK----NSGVPSPRPNAHRRYKLLKDVM 163
           IKQHQ Q             N  A S    GT K    NSGVPSPRP+AHRRYKLLKDVM
Sbjct: 121 IKQHQHQDHLNTSTTTTNNNNSVAVSSGERGTSKNNNNNSGVPSPRPSAHRRYKLLKDVM 163

[Close]

BLAST of Spo08653.1 vs. UniProtKB/TrEMBL
Match: A0A0D2T417_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G107200 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.100e-24
Identity = 77/162 (47.53%), Postives = 93/162 (57.41%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60
           M D   VCCMCGD+GF+DK+F+C++CR RFQH YCSNY                   S  
Sbjct: 1   MVDYQTVCCMCGDVGFSDKIFRCNKCRHRFQHSYCSNYY------------------SEF 60

Query: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120
            + +ELCDWC+SE +NS    KH S S K         S + +RN   +  RSEY SG++
Sbjct: 61  AEPIELCDWCRSEERNS----KHGSFSKK---------SPLMNRNETGIVNRSEY-SGDK 120

Query: 121 IKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC 163
           IKQH D  Q+     G  KN G PSPRP   RRYKLLKDVMC
Sbjct: 121 IKQHNDDHQHEHHHRG--KNGGTPSPRPTT-RRYKLLKDVMC 127

[Close]

BLAST of Spo08653.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MVF4_GOSAR (Zinc finger protein OS=Gossypium arboreum GN=F383_26022 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.100e-24
Identity = 79/172 (45.93%), Postives = 97/172 (56.40%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQ----------HLYCSNYNYGKQELLLSPS 60
           M D+  VCCMCGD+GF+DKLF+C++CR+RFQ          H+YCSNY            
Sbjct: 1   MVDRQTVCCMCGDVGFSDKLFRCNKCRYRFQHSYALSSFHHHMYCSNY------------ 60

Query: 61  FSSSSSSSTNTKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLH 120
                  S   + +ELCDWC+SE +NS    KH          SSS  S + +RN   + 
Sbjct: 61  ------YSEFAEPIELCDWCRSEERNS----KH---------GSSSKKSPLMNRNETGIV 120

Query: 121 IRSEYASGERIKQHQDQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC 163
            RSEY SG++IKQH D  Q+     G  KNSG PSPRP   RRYKLLKDVMC
Sbjct: 121 NRSEY-SGDKIKQHNDDHQHEHHHRG--KNSGTPSPRPTT-RRYKLLKDVMC 137

[Close]

BLAST of Spo08653.1 vs. UniProtKB/TrEMBL
Match: A9PG29_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05730g PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.900e-24
Identity = 75/163 (46.01%), Postives = 94/163 (57.67%), Query Frame = 1


		  
Query: 1   MADQDRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTN 60
           M D   VCCMCGD+GF DKLF+C++CR RFQHLYCSNY YG+        FS        
Sbjct: 1   MVDIQTVCCMCGDVGFPDKLFRCNKCRNRFQHLYCSNY-YGE--------FS-------- 60

Query: 61  TKSLELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGER 120
            + +E CDWCQSE +N+   N             SS  S  +H +   +  RSEY+   +
Sbjct: 61  -EPIEQCDWCQSEERNARHGN-------------SSKKSGAEHDSGTLVTKRSEYSGDHK 120

Query: 121 IKQHQDQQQNGAASSGTPKN-SGVPSPRPNAHRRYKLLKDVMC 163
           IKQH  ++ +  +S    KN SG+PSPRP   RRYKLLKDVMC
Sbjct: 121 IKQHDREENSTTSSDQKGKNPSGIPSPRPTT-RRYKLLKDVMC 131

[Close]

BLAST of Spo08653.1 vs. TAIR (Arabidopsis)
Match: AT1G02070.1 (unknown protein)

HSP 1 Score: 105.5 bits (262), Expect = 3.100e-23
Identity = 72/161 (44.72%), Postives = 89/161 (55.28%), Query Frame = 1


		  
Query: 5   DRVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTNTKSL 64
           +RVCCMCGD+GF+DKLF C  CR RFQH YCSNY YG+                   +  
Sbjct: 2   ERVCCMCGDVGFSDKLFSCGHCRCRFQHSYCSNY-YGQF-----------------AEPT 61

Query: 65  ELCDWCQSEGKNSSTTNKHQSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGERIKQH 124
           E+CDWC+S+ +  S   +H   S K+       SSS+ + N+ S   RSEY+ G RIK +
Sbjct: 62  EICDWCRSDDRKLSNVARHGGSSSKKP------SSSVKYENDFSN--RSEYSPGHRIKHN 121

Query: 125 Q---DQQQNGAASSGTPKNSGVPSPRPNAHRRYKLLKDVMC 163
               DQ   G A  G     GV SP+  A RRYKLLKDVMC
Sbjct: 122 NNRHDQVAKGVAGDG----GGVTSPK-TATRRYKLLKDVMC 131

[Close]

BLAST of Spo08653.1 vs. TAIR (Arabidopsis)
Match: AT3G60520.1 (unknown protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.100e-20
Identity = 73/164 (44.51%), Postives = 84/164 (51.22%), Query Frame = 1


		  
Query: 6   RVCCMCGDIGFADKLFQCSRCRFRFQHLYCSNYNYGKQELLLSPSFSSSSSSSTNTKSLE 65
           RVCCMCGD+GF DKLF CS+C  RFQH YCS+Y Y +Q                    ++
Sbjct: 7   RVCCMCGDVGFFDKLFHCSKCLNRFQHSYCSSY-YKEQ-----------------ADPIK 66

Query: 66  LCDWCQSEGKNSSTTNKH--QSGSYKRSLSSSSSSSSMDHRNNNSLHIRSEYASGERIKQ 125
           +CDWCQ E K S T  KH    GS KRS                    RSEY+S     Q
Sbjct: 67  ICDWCQCEAK-SRTGAKHGVNGGSSKRS-------------------YRSEYSSPHH--Q 126

Query: 126 HQDQQQNGAASSGTPK-----NSGVPSPRPNAHRRYKLLKDVMC 163
            + Q+ N   SS  P       +GVPSPRP A RRYKLLKDVMC
Sbjct: 127 IKQQEINQTTSSSIPPAADKGKTGVPSPRP-ATRRYKLLKDVMC 129

The following BLAST results are available for this feature:

BLAST of Spo08653.1 vs. NCBI nr
BLAST of Spo08653.1 vs. UniProtKB/TrEMBL
BLAST of Spo08653.1 vs. ExPASy Swiss-Prot
BLAST of Spo08653.1 vs. TAIR (Arabidopsis)

BLAST of Spo08653.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902209161\|gb\|KNA16118.1\|	8.5e-84	100.	hypothetical protein SOVF_0920...	[more]
gi\|731361016\|ref\|XP_010692130.1\|	3.9e-44	63.5	PREDICTED: uncharacterized pro...	[more]
gi\|823208044\|ref\|XP_012437521.1\|	1.5e-24	47.5	PREDICTED: uncharacterized pro...	[more]
gi\|728818796\|gb\|KHG02921.1\|	5.8e-24	45.9	Zinc finger protein [Gossypium...	[more]
gi\|566202783\|ref\|XP_006375260.1\|	9.9e-24	46.0	hypothetical protein POPTR_001...	[more]

BLAST of Spo08653.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R9D1_SPIOL	6.0e-84	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BIV3_BETVU	2.7e-44	63.5	Uncharacterized protein OS=Bet...	[more]
A0A0D2T417_GOSRA	1.1e-24	47.5	Uncharacterized protein OS=Gos...	[more]
A0A0B0MVF4_GOSAR	4.1e-24	45.9	Zinc finger protein OS=Gossypi...	[more]
A9PG29_POPTR	6.9e-24	46.0	Uncharacterized protein OS=Pop...	[more]

BLAST of Spo08653.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo08653.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G02070.1	3.1e-23	44.7	unknown protein	[more]
AT3G60520.1	1.1e-20	44.5	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011011	Zinc finger, FYVE/PHD-type	unknown	SSF57903	FYVE/PHD zinc finger	coord: 3..39 score: 1.
None	No IPR available	PANTHER	PTHR33779	FAMILY NOT NAMED	coord: 1..44 score: 1.3E-61coord: 62..162 score: 1.3
None	No IPR available	PANTHER	PTHR33779:SF2	SUBFAMILY NOT NAMED	coord: 1..44 score: 1.3E-61coord: 62..162 score: 1.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0006857	oligopeptide transport
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009611	response to wounding
biological_process	GO:0042128	nitrate assimilation
biological_process	GO:0030001	metal ion transport
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0015293	symporter activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0008422	beta-glucosidase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21791	0.74	Barchart \| Table
Spo06918	0.72	Barchart \| Table
Spo06774	0.70	Barchart \| Table
Spo15703	0.70	Barchart \| Table
Spo21487	0.69	Barchart \| Table
Spo07813	0.69	Barchart \| Table
Spo01607	0.69	Barchart \| Table
Spo11589	0.68	Barchart \| Table
Spo26557	0.67	Barchart \| Table
Spo01592	0.67	Barchart \| Table
Spo25656	0.67	Barchart \| Table
Spo05548	0.66	Barchart \| Table
Spo13333	0.66	Barchart \| Table
Spo15307	0.66	Barchart \| Table
Spo04298	0.66	Barchart \| Table
Spo03899	0.66	Barchart \| Table
Spo01316	0.66	Barchart \| Table
Spo01117	0.66	Barchart \| Table
Spo20518	0.66	Barchart \| Table
Spo19139	0.65	Barchart \| Table
Spo07301	0.65	Barchart \| Table
Spo24156	0.65	Barchart \| Table