Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTATAATGGACAATTTTTTATAACAGATTTCACATTTTTTTTTTTTGTACTCGTTGTTTTTTTACGGTAGGACTCGTGAAAAGTCCAGTCCAAATCCTCACATCCACCATTAACTACTTTTCTGAGGAGAGGTCAGCAAAAGTAATTGGAAAAGAGGGCGTAGACTAAAGGTGGTTGAATTTGAAGTATTGAACTCAATCAAAGCAAAACAAGAATTAGATCCAACGAAAATGATGAGAGAATCGATTTCTGGTCTTCATCTTAAACTTTCTAGTAATAATTTTACTCTACTTTTATTGCTGTTGCTGGTATTGACTCCCAAAGCCATTGCTTGGACTGGTGAAATTCGAGGCAGAGTTGTTTGTGATGTTTGTGGGGATTCTTCTATTGGACCTGAGGATCATGTTCTTCAAGGTAGCGCCTTTTTTTTAATTGTTTCATGTTGTGGGTCGCTTTTTTTTTTTTTTTAATCAAGTATATATTAATGTTTTCCTGCTTATTTTGGGGTAAAGTTTGAATGTTTGGGGGATTTAGTGAGTATGTTGATGAGTTTGTATTGATAATATGAATTAGGTTTTTGGATTAGCAGATTGTCTTGATTTTTTATGGAATTTGTTGTTGCCGACAGTTTTACTGTTCTGTTCTATCACTCTATTTACTGCTGAATGAATGCCGACAGTATGAAATGAGGTTTTTCTGAGAGCAATTTTATCAGTAGTTAGTTGGTAATTTAGAGCTCTTCATAGATTTCTTGTTCAAAGTCTTAGGGTTTGCTTTTACCTTACTCATGTAATTATGATGATAGTAATTTTGATGTGGGAAAGTGATCACTTGATGGGATACCTATTGTTGTATATTGTTTGAAGAATCCGTTGCAGACGTGCATACTCGAAATGTTTAGTGTGTAGGAAATCTATATTTTCTCCATTTCGCGCTAATGTGGACCGCTTCAATATTTTGTTTGTAACATTTGAACTGATGTTGGACTACCTGGTTGTTAAAGGACATTCAAATCATGTCGATATACTTGAACGGTCATTGCCTTCTGGAGACAGTTGCCATTTCACATTTTATATCATATGATTGCCATTTGATCTTGTGGATGAAGAATTTCAAGAAGCTTTTCGAAGATATACACTTAAATACCATTTTCTTTTGGAGATGATTGTCACTTGACTTTAGATCTGATGATAAGCCGTTTTTCATTTGCCATTTTTCACTTGTGGATGAAGTTGATTAGAAGATATGATTCCTATTCCTGATTAGGATGAAGTGTCAACGTAAGTAAGTGTTATTTTTTCTGATTCTAGACAGTTAAAATGACAGAGGACACCTTATGTTGAATTGTTAACATCATTAAATTCTAGACGCGAATTGTGGAATGTGGTTAGATGAGTCATGAATAGCAACCCTTTTGATTGCAGTTGTATCCTTGCTGAGTATTGGTCAAGTCTTGGGGACTTTCATGTCATTCTTACTAGGAGATTGTAGATTGTATAGCTATGAGATTGCTGAGTAGGAAACTTGTGCAGGAATATGTAAGTGATGTTGAAAAAACTAAAGAGAATTGCTTTGCTTTTGTGGGCCTCTGAAGTTACTATTGGTTATTTTAACAGCCAACCTTACAAATAAGAATTACTGCAGTATGCATGGACTATGGTTTGTCATTTTACATATATTCTTCCTATTAGCAATGTGTTGGGTCATATGGGTTGTTGTGTTGATGCAGGGGGTGAGGTAGCTGTTCTATGCATAACAAAATCTGGGGAGGTTGTGAACTATCAGGCGTTCACAGATTCGAAAGGAGTATATACAGTTGCAGAAACAATGTCTGAAAGCCAACGTTGGGACGCATGCCTAGCACGACCAATAAGCAGCTTCCATGAGCGTTGTAATCATCTTAGGGATGGAAGCTCGGGTGTCAAGTTCACTTATAAGCGTCCTTCTGGTTATTCTTACACTCTTAAGCCGTTTGTTTATCAGTTTGGTAATACCCCAATGTACTGCTAAGCTACCAAGCTACATTTTTTTTGGGTGTAATCTATGTAGTATGCCCTGCAACTTGCACACAGTGAAGATAAATAAATGATCGAGTTGCTGATTAAGTTATTATTCTCTATGTGTGACTTTGTGATGAATGATTGTTATGGTTAGGGCTAGAAGAGGTTGACGGCTTCAAGAATTGAGATGAGTGATGAGTGATGAGTGATGACTTAGAGGATCTTCTGTTTAATTCTGATGTACTGCAGATGTTGGTTACTACTCACCAGAAAATCAGAAATACGCCACTCTAAGAAAATATGTCTGTAGCACCCACATAGGAATATAGGATCCACATTCATATCCCATCCTAGGAGCTTATCTTTAGTGTTGACCTTACCTAATACTTTGTACATAAATCCCTTCAAGAACTTGTACAATTGCACATATATTA AGTATAATGGACAATTTTTTATAACAGATTTCACATTTTTTTTTTTTGTACTCGTTGTTTTTTTACGGTAGGACTCGTGAAAAGTCCAGTCCAAATCCTCACATCCACCATTAACTACTTTTCTGAGGAGAGGTCAGCAAAAGTAATTGGAAAAGAGGGCGTAGACTAAAGGTGGTTGAATTTGAAGTATTGAACTCAATCAAAGCAAAACAAGAATTAGATCCAACGAAAATGATGAGAGAATCGATTTCTGGTCTTCATCTTAAACTTTCTAGTAATAATTTTACTCTACTTTTATTGCTGTTGCTGGTATTGACTCCCAAAGCCATTGCTTGGACTGGTGAAATTCGAGGCAGAGTTGTTTGTGATGTTTGTGGGGATTCTTCTATTGGACCTGAGGATCATGTTCTTCAAGGGGGTGAGGTAGCTGTTCTATGCATAACAAAATCTGGGGAGGTTGTGAACTATCAGGCGTTCACAGATTCGAAAGGAGTATATACAGTTGCAGAAACAATGTCTGAAAGCCAACGTTGGGACGCATGCCTAGCACGACCAATAAGCAGCTTCCATGAGCGTTGTAATCATCTTAGGGATGGAAGCTCGGGTGTCAAGTTCACTTATAAGCGTCCTTCTGGTTATTCTTACACTCTTAAGCCGTTTGTTTATCAGTTTGGTAATACCCCAATGTACTGCTAAGCTACCAAGCTACATTTTTTTTGGGTGTAATCTATGTAGTATGCCCTGCAACTTGCACACAGTGAAGATAAATAAATGATCGAGTTGCTGATTAAGTTATTATTCTCTATGTGTGACTTTGTGATGAATGATTGTTATGGTTAGGGCTAGAAGAGGTTGACGGCTTCAAGAATTGAGATGAGTGATGAGTGATGAGTGATGACTTAGAGGATCTTCTGTTTAATTCTGATGTACTGCAGATGTTGGTTACTACTCACCAGAAAATCAGAAATACGCCACTCTAAGAAAATATGTCTGTAGCACCCACATAGGAATATAGGATCCACATTCATATCCCATCCTAGGAGCTTATCTTTAGTGTTGACCTTACCTAATACTTTGTACATAAATCCCTTCAAGAACTTGTACAATTGCACATATATTA ATGATGAGAGAATCGATTTCTGGTCTTCATCTTAAACTTTCTAGTAATAATTTTACTCTACTTTTATTGCTGTTGCTGGTATTGACTCCCAAAGCCATTGCTTGGACTGGTGAAATTCGAGGCAGAGTTGTTTGTGATGTTTGTGGGGATTCTTCTATTGGACCTGAGGATCATGTTCTTCAAGGGGGTGAGGTAGCTGTTCTATGCATAACAAAATCTGGGGAGGTTGTGAACTATCAGGCGTTCACAGATTCGAAAGGAGTATATACAGTTGCAGAAACAATGTCTGAAAGCCAACGTTGGGACGCATGCCTAGCACGACCAATAAGCAGCTTCCATGAGCGTTGTAATCATCTTAGGGATGGAAGCTCGGGTGTCAAGTTCACTTATAAGCGTCCTTCTGGTTATTCTTACACTCTTAAGCCGTTTGTTTATCAGTTTGGTAATACCCCAATGTACTGCTAA MMRESISGLHLKLSSNNFTLLLLLLLVLTPKAIAWTGEIRGRVVCDVCGDSSIGPEDHVLQGGEVAVLCITKSGEVVNYQAFTDSKGVYTVAETMSESQRWDACLARPISSFHERCNHLRDGSSGVKFTYKRPSGYSYTLKPFVYQFGNTPMYC Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08753.1 vs. NCBI nr
Match: gi|902234260|gb|KNA23383.1| (hypothetical protein SOVF_025360, partial [Spinacia oleracea]) HSP 1 Score: 300.1 bits (767), Expect = 2.300e-78 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
BLAST of Spo08753.1 vs. NCBI nr
Match: gi|731329579|ref|XP_010675670.1| (PREDICTED: uncharacterized protein LOC104891645 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 261.9 bits (668), Expect = 6.900e-67 Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = 1
BLAST of Spo08753.1 vs. NCBI nr
Match: gi|802588259|ref|XP_012070787.1| (PREDICTED: uncharacterized protein LOC105632929 [Jatropha curcas]) HSP 1 Score: 224.6 bits (571), Expect = 1.200e-55 Identity = 104/142 (73.24%), Postives = 119/142 (83.80%), Query Frame = 1
BLAST of Spo08753.1 vs. NCBI nr
Match: gi|729356417|ref|XP_010545214.1| (PREDICTED: uncharacterized protein LOC104817659 [Tarenaya hassleriana]) HSP 1 Score: 223.4 bits (568), Expect = 2.700e-55 Identity = 108/146 (73.97%), Postives = 122/146 (83.56%), Query Frame = 1
BLAST of Spo08753.1 vs. NCBI nr
Match: gi|297737406|emb|CBI26607.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 221.5 bits (563), Expect = 1.000e-54 Identity = 97/121 (80.17%), Postives = 109/121 (90.08%), Query Frame = 1
BLAST of Spo08753.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV87_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_025360 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 1.600e-78 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
BLAST of Spo08753.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CKW7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g087810 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 4.800e-67 Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = 1
BLAST of Spo08753.1 vs. UniProtKB/TrEMBL
Match: F6HEN3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00050 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 7.200e-55 Identity = 97/121 (80.17%), Postives = 109/121 (90.08%), Query Frame = 1
BLAST of Spo08753.1 vs. UniProtKB/TrEMBL
Match: A0A097PK62_VITVI (Pollen Ole e 1 allergen and extensin family protein (Fragment) OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 7.200e-55 Identity = 97/121 (80.17%), Postives = 109/121 (90.08%), Query Frame = 1
BLAST of Spo08753.1 vs. UniProtKB/TrEMBL
Match: B9SAF6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0585740 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 1.800e-53 Identity = 101/134 (75.37%), Postives = 115/134 (85.82%), Query Frame = 1
BLAST of Spo08753.1 vs. TAIR (Arabidopsis)
Match: AT5G54855.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 204.1 bits (518), Expect = 6.000e-53 Identity = 98/140 (70.00%), Postives = 113/140 (80.71%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08753.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08753.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08753.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo08753.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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