Homology
BLAST of Spo08824.1 vs. NCBI nr
Match:
gi|902169092|gb|KNA07603.1| (hypothetical protein SOVF_170290 [Spinacia oleracea])
HSP 1 Score: 572.4 bits (1474), Expect = 4.500e-160
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1
Query: 1 MATNPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSLQKSTIVAC 60
MATNPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSLQKSTIVAC
Sbjct: 1 MATNPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSLQKSTIVAC 60
Query: 61 VAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGN 120
VAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGN
Sbjct: 61 VAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGN 120
Query: 121 LPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDM 180
LPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDM
Sbjct: 121 LPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDM 180
Query: 181 DGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSARV 240
DGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSARV
Sbjct: 181 DGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSARV 240
Query: 241 VSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 294
VSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF
Sbjct: 241 VSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 293
BLAST of Spo08824.1 vs. NCBI nr
Match:
gi|731368169|ref|XP_010695994.1| (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 468.8 bits (1205), Expect = 7.100e-129
Identity = 243/296 (82.09%), Postives = 270/296 (91.22%), Query Frame = 1
Query: 3 TNPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSLQK----STIV 62
TNPLLKT+SMS TCFTTSLHTPS+FNPKSLYFSTP+KPTKLN L+LS SL+K +T+V
Sbjct: 7 TNPLLKTVSMSHTCFTTSLHTPSVFNPKSLYFSTPLKPTKLN-LALSISLKKPTFSTTVV 66
Query: 63 ACVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGV-EGGQGFSEPPEEAKLF 122
+CVAQTS+WEQ+G +NAVLE E++ + VSWG E QVSD G E G GFSEPPEEAKLF
Sbjct: 67 SCVAQTSDWEQDGGSNAVLEEETEQQQEVSWGGEAQVSDFGSEGENGGGFSEPPEEAKLF 126
Query: 123 VGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNG 182
VGNLPYDVDSEKLA +FD AGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE+LNG
Sbjct: 127 VGNLPYDVDSEKLAQMFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMLNG 186
Query: 183 YDMDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVS 242
+D+DGR LTVNKAAPRGSRPER PR +FEP+CRVYVGNLPWDVD+ RLEQLFSEHGKV+S
Sbjct: 187 FDLDGRTLTVNKAAPRGSRPERPPR-EFEPTCRVYVGNLPWDVDNGRLEQLFSEHGKVLS 246
Query: 243 ARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 294
ARVVSDRETGRSRGFGFVTM+S+SE+NDAIAALDGQTL+GRA+RVNVAEERPRRAF
Sbjct: 247 ARVVSDRETGRSRGFGFVTMASDSEMNDAIAALDGQTLEGRAIRVNVAEERPRRAF 300
BLAST of Spo08824.1 vs. NCBI nr
Match:
gi|133247|sp|P28644.1|ROC1_SPIOL (RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP)
HSP 1 Score: 455.3 bits (1170), Expect = 8.100e-125
Identity = 232/234 (99.15%), Postives = 233/234 (99.57%), Query Frame = 1
Query: 60 CVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVG 119
CVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVG
Sbjct: 1 CVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVG 60
Query: 120 NLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYD 179
NLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYD
Sbjct: 61 NLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYD 120
Query: 180 MDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSAR 239
MDGRQLTVNKAAPRGS PERAPRGDFEPSCRVYVGNLPWDVD+SRLEQLFSEHGKVVSAR
Sbjct: 121 MDGRQLTVNKAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSAR 180
Query: 240 VVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 294
VVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF
Sbjct: 181 VVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 233
BLAST of Spo08824.1 vs. NCBI nr
Match:
gi|21309|emb|CAA41023.1| (28kD RNA binding protein [Spinacia oleracea])
HSP 1 Score: 441.8 bits (1135), Expect = 9.300e-121
Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 1
Query: 67 WEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVD 126
WEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVD
Sbjct: 1 WEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVD 60
Query: 127 SEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLT 186
SEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLT
Sbjct: 61 SEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLT 120
Query: 187 VNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSARVVSDRET 246
VNKAAPRGS PERAPRGDFEPSCRVYVGNLPWDVD+SRLEQLFSEHGKVVSARVVSDRET
Sbjct: 121 VNKAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRET 180
Query: 247 GRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 294
GRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF
Sbjct: 181 GRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 226
BLAST of Spo08824.1 vs. NCBI nr
Match:
gi|168274276|dbj|BAG09558.1| (chloroplast RNA binding protein [Mesembryanthemum crystallinum])
HSP 1 Score: 426.0 bits (1094), Expect = 5.300e-116
Identity = 238/304 (78.29%), Postives = 262/304 (86.18%), Query Frame = 1
Query: 4 NPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLS----FSLQKS-TIV 63
NP LKTLS+S CFTTSL+TPSIFNPKS FS P+KPTKLN LS+S FS QKS TIV
Sbjct: 7 NPCLKTLSLSHNCFTTSLYTPSIFNPKSHNFSIPLKPTKLN-LSISVFSPFSPQKSSTIV 66
Query: 64 ACVAQTSEWEQEGSTNAVLEGESDPEGAVSWG------SETQVSDEGGV---EGGQGFSE 123
+ VAQTS+W+QE S+NA+L+ E GA +WG SE QVS G E QGFSE
Sbjct: 67 SYVAQTSDWDQE-SSNALLDDEQQVGGA-TWGTQNFGDSEPQVSGVGNEDEEESEQGFSE 126
Query: 124 PPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 183
PPEEAKLFVGNLPYDVDSE+LA IFD AGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAE
Sbjct: 127 PPEEAKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 186
Query: 184 KAVELLNGYDMDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLF 243
KAVE+LNG+DM+GR LTVNKAAPRGSRPER PR +FEPSCRVYVGNLPWDVD++RLEQ+F
Sbjct: 187 KAVEMLNGFDMNGRLLTVNKAAPRGSRPERPPR-EFEPSCRVYVGNLPWDVDNARLEQVF 246
Query: 244 SEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERP 294
SEHGKV+SARVVSDRETGRSRGFGFV+M+SESE+NDAIAALDGQTLDGRA+RVNVAEERP
Sbjct: 247 SEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAALDGQTLDGRAIRVNVAEERP 306
BLAST of Spo08824.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9QLQ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_170290 PE=4 SV=1)
HSP 1 Score: 572.4 bits (1474), Expect = 3.200e-160
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1
Query: 1 MATNPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSLQKSTIVAC 60
MATNPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSLQKSTIVAC
Sbjct: 1 MATNPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSLQKSTIVAC 60
Query: 61 VAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGN 120
VAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGN
Sbjct: 61 VAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGN 120
Query: 121 LPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDM 180
LPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDM
Sbjct: 121 LPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDM 180
Query: 181 DGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSARV 240
DGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSARV
Sbjct: 181 DGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSARV 240
Query: 241 VSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 294
VSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF
Sbjct: 241 VSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 293
BLAST of Spo08824.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8B8E1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g177110 PE=4 SV=1)
HSP 1 Score: 468.8 bits (1205), Expect = 4.900e-129
Identity = 243/296 (82.09%), Postives = 270/296 (91.22%), Query Frame = 1
Query: 3 TNPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSLQK----STIV 62
TNPLLKT+SMS TCFTTSLHTPS+FNPKSLYFSTP+KPTKLN L+LS SL+K +T+V
Sbjct: 7 TNPLLKTVSMSHTCFTTSLHTPSVFNPKSLYFSTPLKPTKLN-LALSISLKKPTFSTTVV 66
Query: 63 ACVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGV-EGGQGFSEPPEEAKLF 122
+CVAQTS+WEQ+G +NAVLE E++ + VSWG E QVSD G E G GFSEPPEEAKLF
Sbjct: 67 SCVAQTSDWEQDGGSNAVLEEETEQQQEVSWGGEAQVSDFGSEGENGGGFSEPPEEAKLF 126
Query: 123 VGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNG 182
VGNLPYDVDSEKLA +FD AGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE+LNG
Sbjct: 127 VGNLPYDVDSEKLAQMFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMLNG 186
Query: 183 YDMDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVS 242
+D+DGR LTVNKAAPRGSRPER PR +FEP+CRVYVGNLPWDVD+ RLEQLFSEHGKV+S
Sbjct: 187 FDLDGRTLTVNKAAPRGSRPERPPR-EFEPTCRVYVGNLPWDVDNGRLEQLFSEHGKVLS 246
Query: 243 ARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 294
ARVVSDRETGRSRGFGFVTM+S+SE+NDAIAALDGQTL+GRA+RVNVAEERPRRAF
Sbjct: 247 ARVVSDRETGRSRGFGFVTMASDSEMNDAIAALDGQTLEGRAIRVNVAEERPRRAF 300
BLAST of Spo08824.1 vs. UniProtKB/TrEMBL
Match:
B0M184_MESCR (Chloroplast RNA binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1)
HSP 1 Score: 426.0 bits (1094), Expect = 3.700e-116
Identity = 238/304 (78.29%), Postives = 262/304 (86.18%), Query Frame = 1
Query: 4 NPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLS----FSLQKS-TIV 63
NP LKTLS+S CFTTSL+TPSIFNPKS FS P+KPTKLN LS+S FS QKS TIV
Sbjct: 7 NPCLKTLSLSHNCFTTSLYTPSIFNPKSHNFSIPLKPTKLN-LSISVFSPFSPQKSSTIV 66
Query: 64 ACVAQTSEWEQEGSTNAVLEGESDPEGAVSWG------SETQVSDEGGV---EGGQGFSE 123
+ VAQTS+W+QE S+NA+L+ E GA +WG SE QVS G E QGFSE
Sbjct: 67 SYVAQTSDWDQE-SSNALLDDEQQVGGA-TWGTQNFGDSEPQVSGVGNEDEEESEQGFSE 126
Query: 124 PPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 183
PPEEAKLFVGNLPYDVDSE+LA IFD AGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAE
Sbjct: 127 PPEEAKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 186
Query: 184 KAVELLNGYDMDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLF 243
KAVE+LNG+DM+GR LTVNKAAPRGSRPER PR +FEPSCRVYVGNLPWDVD++RLEQ+F
Sbjct: 187 KAVEMLNGFDMNGRLLTVNKAAPRGSRPERPPR-EFEPSCRVYVGNLPWDVDNARLEQVF 246
Query: 244 SEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERP 294
SEHGKV+SARVVSDRETGRSRGFGFV+M+SESE+NDAIAALDGQTLDGRA+RVNVAEERP
Sbjct: 247 SEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAALDGQTLDGRAIRVNVAEERP 306
BLAST of Spo08824.1 vs. UniProtKB/TrEMBL
Match:
Q40270_MESCR (RNA-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1)
HSP 1 Score: 399.1 bits (1024), Expect = 4.800e-108
Identity = 223/294 (75.85%), Postives = 251/294 (85.37%), Query Frame = 1
Query: 12 MSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLN-NLSLS------FSLQK----STIVAC 71
MS TCFT+SLH+PSI PKSL+FS P KPTK+ +LSLS FSLQK ST+V
Sbjct: 1 MSNTCFTSSLHSPSILIPKSLFFSIPSKPTKIPLSLSLSSPQLSSFSLQKQTLSSTVVTY 60
Query: 72 VAQTSEWEQEGSTNAVLEGESDPEGAVSWG-SETQVSDEGGVEGGQGFSEPPEEAKLFVG 131
VAQTSEW+QEG TNAVLE SD E SWG +E QVSD G E G+GF EPPE+AKLFVG
Sbjct: 61 VAQTSEWDQEG-TNAVLEEGSDQE--PSWGNTEAQVSDFGSDE-GEGFQEPPEDAKLFVG 120
Query: 132 NLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYD 191
NLP+DVDSEKLA IF+ AGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL + ++
Sbjct: 121 NLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELYHKFE 180
Query: 192 MDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSAR 251
++GR LTVNKAAPRGSRPERAPR ++EPS RVYVGNLPWDVD +RLEQ+FSEHGKV+SAR
Sbjct: 181 VNGRFLTVNKAAPRGSRPERAPR-EYEPSFRVYVGNLPWDVDDARLEQVFSEHGKVLSAR 240
Query: 252 VVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 294
VVSDRETGRSRGF FVTM+SESE+N+AI ALDGQTL+GRA+RVNVAEERPRR+F
Sbjct: 241 VVSDRETGRSRGFAFVTMASESEMNEAIGALDGQTLEGRAIRVNVAEERPRRSF 289
BLAST of Spo08824.1 vs. UniProtKB/TrEMBL
Match:
T2DNQ6_PHAVU (31 kDa ribonucleoprotein OS=Phaseolus vulgaris GN=PHAVU_009G171500g PE=2 SV=1)
HSP 1 Score: 337.8 bits (865), Expect = 1.300e-89
Identity = 188/304 (61.84%), Postives = 227/304 (74.67%), Query Frame = 1
Query: 3 TNPLLKTLSMSPTCFTTSLHTPSIFN--PKSLYFSTPVKPTKLN----------NLSLSF 62
T K+L+M+ +C +S S+F+ KS FS P KP L +LSL+
Sbjct: 4 TATAFKSLTMADSCLLSS--PSSLFHNITKSHVFSPPSKPLTLQFSCLNSSPSLSLSLAA 63
Query: 63 SLQKSTIVACVAQTSEW-EQEGSTNAVLEGESDPE--GAVSWGSETQVSDEGGVEGGQGF 122
+S ++ VAQTS+W +QEG+ + V + E G + W E E +GF
Sbjct: 64 RTHRSPVLTHVAQTSDWAQQEGNADTVQAQDEKQEEPGLLDW--------EPNGEEDEGF 123
Query: 123 SEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEE 182
EPPEEAK+FVGNLPYDVDSEKLA +FD AGVVEIAEVIYNRETDRSRGFGFVTMSTVEE
Sbjct: 124 VEPPEEAKIFVGNLPYDVDSEKLAMLFDKAGVVEIAEVIYNRETDRSRGFGFVTMSTVEE 183
Query: 183 AEKAVELLNGYDMDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQ 242
AEKAVE +GYD DGRQLTVNKA+PRG++PER PR +FEP+ +YVGNLPWD+DS+RLEQ
Sbjct: 184 AEKAVEKFSGYDYDGRQLTVNKASPRGAQPERPPRRNFEPAASIYVGNLPWDIDSTRLEQ 243
Query: 243 LFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEE 292
+FSEHGKVVSARVV DR++GRSRGFGFVTMS+E+E+NDA+AALDGQTLDGR +RVNVAE+
Sbjct: 244 VFSEHGKVVSARVVYDRDSGRSRGFGFVTMSTETEMNDAVAALDGQTLDGRTIRVNVAED 297
BLAST of Spo08824.1 vs. ExPASy Swiss-Prot
Match:
ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)
HSP 1 Score: 455.3 bits (1170), Expect = 5.100e-127
Identity = 232/234 (99.15%), Postives = 233/234 (99.57%), Query Frame = 1
Query: 60 CVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVG 119
CVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVG
Sbjct: 1 CVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVG 60
Query: 120 NLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYD 179
NLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYD
Sbjct: 61 NLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYD 120
Query: 180 MDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSAR 239
MDGRQLTVNKAAPRGS PERAPRGDFEPSCRVYVGNLPWDVD+SRLEQLFSEHGKVVSAR
Sbjct: 121 MDGRQLTVNKAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSAR 180
Query: 240 VVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 294
VVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF
Sbjct: 181 VVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 233
BLAST of Spo08824.1 vs. ExPASy Swiss-Prot
Match:
CP31B_ARATH (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana GN=CP31B PE=1 SV=1)
HSP 1 Score: 310.8 bits (795), Expect = 1.500e-83
Identity = 179/293 (61.09%), Postives = 214/293 (73.04%), Query Frame = 1
Query: 5 PLLKTLSMSPTCFTTSLHTPSIFNPKS-----LYFSTPVKPTKLNNLSLSFSLQKST-IV 64
P LK L+M+ + +T PSIFN S FS +P L S +L+ S+ +V
Sbjct: 8 PSLKLLAMTNSSSSTLFCIPSIFNISSSESHRFNFSLSSRPVNLTLSLKSKTLRNSSPVV 67
Query: 65 ACVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFV 124
V+QTS W +E EGE G G+ V + E G GF EPPEEAKLFV
Sbjct: 68 TFVSQTSNWAEEE------EGEDGSIG----GTSVTVDESFESEDGVGFPEPPEEAKLFV 127
Query: 125 GNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGY 184
GNLPYDVDS+ LA +F+ AG VEI+EVIYNR+TD+SRGFGFVTMSTVEEAEKAVE N +
Sbjct: 128 GNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSF 187
Query: 185 DMDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSA 244
+++GR+LTVN+AAPRGSRPER PR ++ + R+YVGNLPWDVDS RLE+LFSEHGKVV A
Sbjct: 188 EVNGRRLTVNRAAPRGSRPERQPR-VYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDA 247
Query: 245 RVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRR 292
RVVSDRETGRSRGFGFV MS+E+EVN AIAALDGQ L+GRA++VNVAEER RR
Sbjct: 248 RVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
BLAST of Spo08824.1 vs. ExPASy Swiss-Prot
Match:
CP31A_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP31A PE=1 SV=1)
HSP 1 Score: 306.2 bits (783), Expect = 3.800e-82
Identity = 186/321 (57.94%), Postives = 220/321 (68.54%), Query Frame = 1
Query: 7 LKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLN------NLSLSFS--------- 66
LK L+M+ + +T PSI S S+ ++ + ++ NL LSFS
Sbjct: 10 LKPLAMADSSSSTIFSHPSI---SSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTK 69
Query: 67 --LQKSTIVACVAQTSEWEQEGSTNAVL-----------------EGESDP-EGAVSWGS 126
L+KS V+ VAQTS+W +EG +V E E D EG VS G
Sbjct: 70 THLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGD 129
Query: 127 ETQVS-DEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRE 186
E++ EG V F EP EEAKLFVGNL YDV+S+ LA +F+ AG VEIAEVIYNRE
Sbjct: 130 ESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRE 189
Query: 187 TDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSRPERAPRGDFEPSCR 246
TD+SRGFGFVTMS+V+EAE AVE N YD++GR LTVNKAAPRGSRPERAPR +EP+ R
Sbjct: 190 TDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPR-VYEPAFR 249
Query: 247 VYVGNLPWDVDSSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 292
VYVGNLPWDVD+ RLEQLFSEHGKVV ARVV DRETGRSRGFGFVTMS E+N+AI+AL
Sbjct: 250 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 309
BLAST of Spo08824.1 vs. ExPASy Swiss-Prot
Match:
ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1)
HSP 1 Score: 298.5 bits (763), Expect = 7.900e-80
Identity = 176/297 (59.26%), Postives = 214/297 (72.05%), Query Frame = 1
Query: 1 MATNPLLKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSLQKSTIVAC 60
MATN L +L P FTT+ KS+ S P T+L +SLS SL T+++
Sbjct: 1 MATNGCLISL---PPFFTTT---------KSIS-SYPFLSTQLKPISLSSSLP--TLLSL 60
Query: 61 VAQTSEWE------QEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEA 120
+T+++ E VL+ + S+ E ++E + EP E+A
Sbjct: 61 NKRTTQFPTFVSVLSEDDNTLVLDDQEQGGDFPSFVGEAGETEE--------YQEPSEDA 120
Query: 121 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 180
KLFVGNLPYD+DSE LA +F AGVVEIAEVIYNRETDRSRGFGFVTMSTVEEA+KAVEL
Sbjct: 121 KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 180
Query: 181 LNGYDMDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGK 240
+ YD++GR LTVNKAAPRGSRPERAPR F+P+ R+YVGN+PWD+D +RLEQ+FSEHGK
Sbjct: 181 YSQYDLNGRLLTVNKAAPRGSRPERAPR-TFQPTYRIYVGNIPWDIDDARLEQVFSEHGK 240
Query: 241 VVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRR 292
VVSARVV DRE+GRSRGFGFVTMSSE+E+++AIA LDGQTLDGR +RVN AEERPRR
Sbjct: 241 VVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRR 273
BLAST of Spo08824.1 vs. ExPASy Swiss-Prot
Match:
ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1)
HSP 1 Score: 290.8 bits (743), Expect = 1.700e-77
Identity = 180/322 (55.90%), Postives = 217/322 (67.39%), Query Frame = 1
Query: 2 ATNPLLKTLSMS--------PTCFTTSLHTPSIFNPKSLYFSTPVKPTKLNNLSLSFSL- 61
AT P++K SM+ P F T+ + S P P+K L +LS ++S
Sbjct: 4 ATKPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIK---LLHLSCTYSPC 63
Query: 62 ----QKSTIVACVAQTSEWEQEGSTNAVLEGESDPEGAV----SWGSETQVSDEGGVE-- 121
+K T V+ + QE +L+G+ G + G ET+ +EG VE
Sbjct: 64 ILSPKKKTSVSAL-------QEEENTLILDGQGQESGDLFNFEPSGEETE--EEGFVEAV 123
Query: 122 GGQG-------------FSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNR 181
G G F EPPE+AKLFVGNLPYDVDSE LA +F+ AGVVEIAEVIYNR
Sbjct: 124 GDAGESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNR 183
Query: 182 ETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSRPERAPRGDFEPSC 241
+TD+SRGFGFVTMSTVEEAEKAVE+ N YD++GR LTVNKAA RG RPER PR FE S
Sbjct: 184 DTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPR-TFEQSY 243
Query: 242 RVYVGNLPWDVDSSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 292
R+YVGN+PW +D +RLEQLFSEHGKVVSARVV DRETGRSRGFGFVTM+SE+E++DAIA
Sbjct: 244 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIAN 303
BLAST of Spo08824.1 vs. TAIR (Arabidopsis)
Match:
AT5G50250.1 (chloroplast RNA-binding protein 31B)
HSP 1 Score: 310.8 bits (795), Expect = 8.700e-85
Identity = 179/293 (61.09%), Postives = 214/293 (73.04%), Query Frame = 1
Query: 5 PLLKTLSMSPTCFTTSLHTPSIFNPKS-----LYFSTPVKPTKLNNLSLSFSLQKST-IV 64
P LK L+M+ + +T PSIFN S FS +P L S +L+ S+ +V
Sbjct: 8 PSLKLLAMTNSSSSTLFCIPSIFNISSSESHRFNFSLSSRPVNLTLSLKSKTLRNSSPVV 67
Query: 65 ACVAQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFV 124
V+QTS W +E EGE G G+ V + E G GF EPPEEAKLFV
Sbjct: 68 TFVSQTSNWAEEE------EGEDGSIG----GTSVTVDESFESEDGVGFPEPPEEAKLFV 127
Query: 125 GNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGY 184
GNLPYDVDS+ LA +F+ AG VEI+EVIYNR+TD+SRGFGFVTMSTVEEAEKAVE N +
Sbjct: 128 GNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSF 187
Query: 185 DMDGRQLTVNKAAPRGSRPERAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHGKVVSA 244
+++GR+LTVN+AAPRGSRPER PR ++ + R+YVGNLPWDVDS RLE+LFSEHGKVV A
Sbjct: 188 EVNGRRLTVNRAAPRGSRPERQPR-VYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDA 247
Query: 245 RVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRR 292
RVVSDRETGRSRGFGFV MS+E+EVN AIAALDGQ L+GRA++VNVAEER RR
Sbjct: 248 RVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
BLAST of Spo08824.1 vs. TAIR (Arabidopsis)
Match:
AT4G24770.1 (31-kDa RNA binding protein)
HSP 1 Score: 306.2 bits (783), Expect = 2.100e-83
Identity = 186/321 (57.94%), Postives = 220/321 (68.54%), Query Frame = 1
Query: 7 LKTLSMSPTCFTTSLHTPSIFNPKSLYFSTPVKPTKLN------NLSLSFS--------- 66
LK L+M+ + +T PSI S S+ ++ + ++ NL LSFS
Sbjct: 10 LKPLAMADSSSSTIFSHPSI---SSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTK 69
Query: 67 --LQKSTIVACVAQTSEWEQEGSTNAVL-----------------EGESDP-EGAVSWGS 126
L+KS V+ VAQTS+W +EG +V E E D EG VS G
Sbjct: 70 THLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGD 129
Query: 127 ETQVS-DEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRE 186
E++ EG V F EP EEAKLFVGNL YDV+S+ LA +F+ AG VEIAEVIYNRE
Sbjct: 130 ESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRE 189
Query: 187 TDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSRPERAPRGDFEPSCR 246
TD+SRGFGFVTMS+V+EAE AVE N YD++GR LTVNKAAPRGSRPERAPR +EP+ R
Sbjct: 190 TDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPR-VYEPAFR 249
Query: 247 VYVGNLPWDVDSSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 292
VYVGNLPWDVD+ RLEQLFSEHGKVV ARVV DRETGRSRGFGFVTMS E+N+AI+AL
Sbjct: 250 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 309
BLAST of Spo08824.1 vs. TAIR (Arabidopsis)
Match:
AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 204.5 bits (519), Expect = 8.800e-53
Identity = 134/291 (46.05%), Postives = 170/291 (58.42%), Query Frame = 1
Query: 25 SIFNPKSLYFSTPVKPTKLNNLS--LSFSLQKSTIVACVAQTSEWEQEGSTNAVLEGESD 84
S FNPKSL F +P ++ LS LSF L ++ +A ++W S A
Sbjct: 11 SSFNPKSLPFGVS-RPASVSLLSPSLSFKLNSDSVSFSIA--AKWNSPASRFA------- 70
Query: 85 PEGAVSWGSETQVSDEGGVEGG----QGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAG 144
V+ SE +V ++G + Q FS + KLFVGNLP++VDS +LA +F++AG
Sbjct: 71 --RNVAITSEFEVEEDGFADVAPPKEQSFSA---DLKLFVGNLPFNVDSAQLAQLFESAG 130
Query: 145 VVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSRPE 204
VE+ EVIY++ T RSRGFGFVTMS+V E E A + NGY++DGR L VN P R +
Sbjct: 131 NVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKRED 190
Query: 205 ---RAPRGDFEPSC---------------RVYVGNLPWDVDSSRLEQLFSEHGKVVSARV 264
R PR F S RVYVGNL W VD LE LFSE GKVV ARV
Sbjct: 191 GFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARV 250
Query: 265 VSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRR 292
+ DR++GRS+GFGFVT S EV +AI +LDG LDGR +RV+ AE RP R
Sbjct: 251 IYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286
BLAST of Spo08824.1 vs. TAIR (Arabidopsis)
Match:
AT3G52380.1 (chloroplast RNA-binding protein 33)
HSP 1 Score: 152.5 bits (384), Expect = 4.000e-37
Identity = 105/297 (35.35%), Postives = 158/297 (53.20%), Query Frame = 1
Query: 4 NPLLKTLSMSPTCFTTSLHTPSIFNPKS--LYFSTPVKPTKLNNLSLSFSLQKSTIVACV 63
NPLL + S S + F PKS L + P N L L ++++ C
Sbjct: 25 NPLLSSHSNSQLFYR--------FTPKSFKLVANCP------NPLILHSNIRRHRFF-CA 84
Query: 64 AQTSEWEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNL 123
A+T + A +E E + E G E +V +E G EE +L+VGNL
Sbjct: 85 AETEASSADDEIQASVEEEEEVEEEGDEGEE-EVEEEKQTTQASG-----EEGRLYVGNL 144
Query: 124 PYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMD 183
PY + S +L+ IF AG V +++Y++ TDRSRGFGFVTM ++EEA++A+++ N +
Sbjct: 145 PYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIG 204
Query: 184 GRQLTVN-KAAPRGSRPE-------RAPRGDFEPSCRVYVGNLPWDVDSSRLEQLFSEHG 243
GR + VN PRG E R + +VY GNL W++ S L+ F +
Sbjct: 205 GRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQP 264
Query: 244 KVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPR 291
V+ A+V+ +R TGRSRGFGF++ S V A+A ++G ++GRA+R+N+A ER +
Sbjct: 265 GVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREK 300
BLAST of Spo08824.1 vs. TAIR (Arabidopsis)
Match:
AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 151.8 bits (382), Expect = 6.800e-37
Identity = 88/196 (44.90%), Postives = 121/196 (61.73%), Query Frame = 1
Query: 94 QVSDEGGVEGGQGFSEPPE--EAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRET 153
++ +E +G +PP KL+ GNLPY+VDS LA I E+ EV+YNR+T
Sbjct: 63 KLEEEEKDDGASAVLDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDT 122
Query: 154 DRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKA-APRGSRPERAPRGDFEPSCR 213
+SRGF FVTMS VE+ ++ L+G + GR L VN A P+ ++ P E +
Sbjct: 123 GQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLYP----ETEHK 182
Query: 214 VYVGNLPWDVDSSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 273
++VGNL W V S L F E G VV ARVV D +TGRSRG+GFV SS++E+ A+ +L
Sbjct: 183 LFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESL 242
Query: 274 DGQTLDGRAVRVNVAE 287
DG L+GRA+RVN+A+
Sbjct: 243 DGFELEGRAIRVNLAQ 254
The following BLAST results are available for this feature:
