Spo08874 (gene)

Overview
NameSpo08874
Typegene
OrganismSpinacia oleracea (Spinach)
Description(Sigma factor sigb regulation protein rsbq, putative) (3.1.1.1)
LocationSpoScf_20790 : 1115 .. 1483 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCAGAATCTATTACAAGCACTGAATGTGAGAGTAGAAGGGACGGGTGAGAAGTACCTGGTGTTAGCCCATGGGTTTGGAACTGACCAATCAGCATGGCAAAGAATCCTACCTTATTTTACTCCGTACTACCGTGTCATACTCTATGACTTGGCCTGTGCTGGGAGTGTCAACCCTGACTTCTTCGACTTCCATCGATACACCACCCTCGACGCCTACGTCGACGACCTCCTCGACATCCTCGACGCGCTCGCTGTCACGCGTTGCGCGTATGTTGGCCATTCTGTTTCAGCTATGATCGGCCTTCTTGCTTCTATACGTCGTCGTGATCTTTTCTCTAAGCAAATACTTGTTGGTGCTTCTCCT

mRNA sequence

ATGGGGCAGAATCTATTACAAGCACTGAATGTGAGAGTAGAAGGGACGGGTGAGAAGTACCTGGTGTTAGCCCATGGGTTTGGAACTGACCAATCAGCATGGCAAAGAATCCTACCTTATTTTACTCCGTACTACCGTGTCATACTCTATGACTTGGCCTGTGCTGGGAGTGTCAACCCTGACTTCTTCGACTTCCATCGATACACCACCCTCGACGCCTACGTCGACGACCTCCTCGACATCCTCGACGCGCTCGCTGTCACGCGTTGCGCGTATGTTGGCCATTCTGTTTCAGCTATGATCGGCCTTCTTGCTTCTATACGTCGTCGTGATCTTTTCTCTAAGCAAATACTTGTTGGTGCTTCTCCT

Coding sequence (CDS)

ATGGGGCAGAATCTATTACAAGCACTGAATGTGAGAGTAGAAGGGACGGGTGAGAAGTACCTGGTGTTAGCCCATGGGTTTGGAACTGACCAATCAGCATGGCAAAGAATCCTACCTTATTTTACTCCGTACTACCGTGTCATACTCTATGACTTGGCCTGTGCTGGGAGTGTCAACCCTGACTTCTTCGACTTCCATCGATACACCACCCTCGACGCCTACGTCGACGACCTCCTCGACATCCTCGACGCGCTCGCTGTCACGCGTTGCGCGTATGTTGGCCATTCTGTTTCAGCTATGATCGGCCTTCTTGCTTCTATACGTCGTCGTGATCTTTTCTCTAAGCAAATACTTGTTGGTGCTTCTCCT

Protein sequence

MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNPDFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVGASP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08874.1Spo08874.1mRNA


Homology
[Close]
BLAST of Spo08874.1 vs. NCBI nr
Match: gi|902214245|gb|KNA17451.1| (hypothetical protein SOVF_079820 [Spinacia oleracea])

HSP 1 Score: 251.9 bits (642), Expect = 5.700e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP
Sbjct: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG
Sbjct: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. NCBI nr
Match: gi|731314724|ref|XP_010688104.1| (PREDICTED: probable strigolactone esterase DAD2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 240.7 bits (613), Expect = 1.300e-60
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MGQNLLQALNVRVEGTGE YLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP
Sbjct: 1   MGQNLLQALNVRVEGTGENYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           DFFDF RYTTLDAYVDDLLDILDAL VTRCAYVGHSVSAMIGLLASIRRR+LFSK IL+G
Sbjct: 61  DFFDFRRYTTLDAYVDDLLDILDALGVTRCAYVGHSVSAMIGLLASIRRRELFSKLILIG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. NCBI nr
Match: gi|590597067|ref|XP_007018509.1| (Alpha/beta-Hydrolases superfamily protein [Theobroma cacao])

HSP 1 Score: 216.9 bits (551), Expect = 2.000e-53
Identity = 103/123 (83.74%), Postives = 114/123 (92.68%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MG  LL+ALNVR++G+GEK+LVLAHGFGTDQSAWQRI+P FTPYYRVILYDL CAGSVNP
Sbjct: 1   MGNFLLEALNVRIDGSGEKFLVLAHGFGTDQSAWQRIVPLFTPYYRVILYDLVCAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           D+FDF RYTTLDAYVDDLL+ILDAL V RCAYVGHSVSAMIG+LASIRR +LFSK IL+G
Sbjct: 61  DYFDFRRYTTLDAYVDDLLNILDALGVDRCAYVGHSVSAMIGILASIRRPELFSKLILIG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. NCBI nr
Match: gi|950995456|ref|XP_014505398.1| (PREDICTED: probable strigolactone esterase DAD2 [Vigna radiata var. radiata])

HSP 1 Score: 213.0 bits (541), Expect = 2.900e-52
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MG ++L ALNVRVEGTG+KYLVLAHGFGTDQSAWQR+LPYFT +Y VILYDL CAGSVNP
Sbjct: 1   MGSSILDALNVRVEGTGDKYLVLAHGFGTDQSAWQRVLPYFTRHYSVILYDLVCAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           D FD+ RYTTLDAYVDDLL+IL+AL V RCAYVGHS+SAMIG+LASIRR DLFSK IL+G
Sbjct: 61  DHFDYRRYTTLDAYVDDLLNILEALRVPRCAYVGHSISAMIGMLASIRRPDLFSKLILIG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. NCBI nr
Match: gi|920705721|gb|KOM48946.1| (hypothetical protein LR48_Vigan07g265000 [Vigna angularis])

HSP 1 Score: 213.0 bits (541), Expect = 2.900e-52
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MG ++L ALNVRVEGTG+KYLVLAHGFGTDQSAWQR+LPYFT +Y VILYDL CAGSVNP
Sbjct: 1   MGSSILDALNVRVEGTGDKYLVLAHGFGTDQSAWQRVLPYFTRHYSVILYDLVCAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           D FD+ RYTTLDAYVDDLL+IL+AL V RCAYVGHS+SAMIG+LASIRR DLFSK IL+G
Sbjct: 61  DHFDYRRYTTLDAYVDDLLNILEALRVPRCAYVGHSISAMIGMLASIRRPDLFSKLILIG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RD40_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_079820 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.000e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP
Sbjct: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG
Sbjct: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D481_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g015160 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 9.200e-61
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MGQNLLQALNVRVEGTGE YLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP
Sbjct: 1   MGQNLLQALNVRVEGTGENYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           DFFDF RYTTLDAYVDDLLDILDAL VTRCAYVGHSVSAMIGLLASIRRR+LFSK IL+G
Sbjct: 61  DFFDFRRYTTLDAYVDDLLDILDALGVTRCAYVGHSVSAMIGLLASIRRRELFSKLILIG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. UniProtKB/TrEMBL
Match: A0A061FMM2_THECC (Alpha/beta-Hydrolases superfamily protein OS=Theobroma cacao GN=TCM_034711 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.400e-53
Identity = 103/123 (83.74%), Postives = 114/123 (92.68%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MG  LL+ALNVR++G+GEK+LVLAHGFGTDQSAWQRI+P FTPYYRVILYDL CAGSVNP
Sbjct: 1   MGNFLLEALNVRIDGSGEKFLVLAHGFGTDQSAWQRIVPLFTPYYRVILYDLVCAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           D+FDF RYTTLDAYVDDLL+ILDAL V RCAYVGHSVSAMIG+LASIRR +LFSK IL+G
Sbjct: 61  DYFDFRRYTTLDAYVDDLLNILDALGVDRCAYVGHSVSAMIGILASIRRPELFSKLILIG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. UniProtKB/TrEMBL
Match: A0A0L9V1Y9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g265000 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.000e-52
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MG ++L ALNVRVEGTG+KYLVLAHGFGTDQSAWQR+LPYFT +Y VILYDL CAGSVNP
Sbjct: 1   MGSSILDALNVRVEGTGDKYLVLAHGFGTDQSAWQRVLPYFTRHYSVILYDLVCAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           D FD+ RYTTLDAYVDDLL+IL+AL V RCAYVGHS+SAMIG+LASIRR DLFSK IL+G
Sbjct: 61  DHFDYRRYTTLDAYVDDLLNILEALRVPRCAYVGHSISAMIGMLASIRRPDLFSKLILIG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. UniProtKB/TrEMBL
Match: A0A0S3RQ85_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G263100 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.000e-52
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MG ++L ALNVRVEGTG+KYLVLAHGFGTDQSAWQR+LPYFT +Y VILYDL CAGSVNP
Sbjct: 1   MGSSILDALNVRVEGTGDKYLVLAHGFGTDQSAWQRVLPYFTRHYSVILYDLVCAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           D FD+ RYTTLDAYVDDLL+IL+AL V RCAYVGHS+SAMIG+LASIRR DLFSK IL+G
Sbjct: 61  DHFDYRRYTTLDAYVDDLLNILEALRVPRCAYVGHSISAMIGMLASIRRPDLFSKLILIG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. ExPASy Swiss-Prot
Match: DAD2_PETHY (Probable strigolactone esterase DAD2 OS=Petunia hybrida GN=DAD2 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.200e-51
Identity = 98/123 (79.67%), Postives = 106/123 (86.18%), Query Frame = 1 

		  

Query: 1   MGQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNP 60
           MGQ LL ALNVRV G+GE+ LVLAHGFGTDQSAW RILP+F   YRV+LYDL CAGSVNP
Sbjct: 1   MGQTLLDALNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNP 60

Query: 61  DFFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVG 120
           DFFDF RYTTLD YVDDLL ILDAL +  CAYVGHSVSAMIG+LASIRR +LFSK IL+G
Sbjct: 61  DFFDFRRYTTLDPYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIG 120

Query: 121 ASP 124
           ASP
Sbjct: 121 ASP 123
[Close]
BLAST of Spo08874.1 vs. ExPASy Swiss-Prot
Match: D14_ARATH (Strigolactone esterase D14 OS=Arabidopsis thaliana GN=D14 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.500e-48
Identity = 90/120 (75.00%), Postives = 105/120 (87.50%), Query Frame = 1 

		  

Query: 4   NLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNPDFF 63
           N+L+ALNVRV GTG++ L LAHGFGTDQSAW  ILPYFT  YRV+LYDL CAGSVNPD+F
Sbjct: 5   NILEALNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFTQNYRVVLYDLVCAGSVNPDYF 64

Query: 64  DFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVGASP 123
           DF+RYTTLD YVDDLL+I+D+L +  CAYVGHSVSAMIG++ASIRR +LFSK IL+G SP
Sbjct: 65  DFNRYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLILIGFSP 124
[Close]
BLAST of Spo08874.1 vs. ExPASy Swiss-Prot
Match: D14_ORYSJ (Strigolactone esterase D14 OS=Oryza sativa subsp. japonica GN=D14 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.200e-47
Identity = 90/122 (73.77%), Postives = 103/122 (84.43%), Query Frame = 1 

		  

Query: 2   GQNLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNPD 61
           G  LLQ LNVRV G+GE+ +VL+HGFGTDQSAW R+LPY T  +RV+LYDL CAGSVNPD
Sbjct: 53  GAKLLQILNVRVVGSGERVVVLSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPD 112

Query: 62  FFDFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVGA 121
            FDF RY  LDAYVDDLL ILDAL + RCA+VGHSVSAMIG+LASIRR DLF+K +L+GA
Sbjct: 113 HFDFRRYDNLDAYVDDLLAILDALRIPRCAFVGHSVSAMIGILASIRRPDLFAKLVLIGA 172

Query: 122 SP 124
           SP
Sbjct: 173 SP 174
[Close]
BLAST of Spo08874.1 vs. ExPASy Swiss-Prot
Match: KAI2_ARATH (Probable esterase KAI2 OS=Arabidopsis thaliana GN=KAI2 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.200e-33
Identity = 65/117 (55.56%), Postives = 87/117 (74.36%), Query Frame = 1 

		  

Query: 7   QALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNPDFFDFH 66
           +A NV+V G+GE  +VL HGFGTDQS W+ ++P+    YRV+LYD   AG+ NPD+FDF 
Sbjct: 6   EAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFD 65

Query: 67  RYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVGASP 124
           RY+ L+ Y  DL+ IL+ L +  C +VGHSVSAMIG+LAS+ R DLFSK +++ ASP
Sbjct: 66  RYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISASP 122
[Close]
BLAST of Spo08874.1 vs. ExPASy Swiss-Prot
Match: D14L_ORYSJ (Probable esterase D14L OS=Oryza sativa subsp. japonica GN=D14L PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.400e-32
Identity = 68/118 (57.63%), Postives = 85/118 (72.03%), Query Frame = 1 

		  

Query: 7   QALNVRVEGTGEK-YLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNPDFFDF 66
           +A N+RV G G++  +VLAHGFGTDQS W+ ++P+    YRV+L+D   AG  NPD+FDF
Sbjct: 6   EAHNLRVVGEGKRGVIVLAHGFGTDQSVWKHLVPHLVADYRVVLFDTMGAGPTNPDYFDF 65

Query: 67  HRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVGASP 124
            RY TL+ Y  DLL IL  L V  C YVGHSVSA+IG +ASI R DLFSK +L+ ASP
Sbjct: 66  SRYATLEGYALDLLAILQELRVASCIYVGHSVSAVIGAIASISRPDLFSKLVLLSASP 123
[Close]
BLAST of Spo08874.1 vs. TAIR (Arabidopsis)
Match: AT3G03990.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 193.4 bits (490), Expect = 8.500e-50
Identity = 90/120 (75.00%), Postives = 105/120 (87.50%), Query Frame = 1 

		  

Query: 4   NLLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNPDFF 63
           N+L+ALNVRV GTG++ L LAHGFGTDQSAW  ILPYFT  YRV+LYDL CAGSVNPD+F
Sbjct: 5   NILEALNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFTQNYRVVLYDLVCAGSVNPDYF 64

Query: 64  DFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVGASP 123
           DF+RYTTLD YVDDLL+I+D+L +  CAYVGHSVSAMIG++ASIRR +LFSK IL+G SP
Sbjct: 65  DFNRYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLILIGFSP 124
[Close]
BLAST of Spo08874.1 vs. TAIR (Arabidopsis)
Match: AT4G37470.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 2.900e-34
Identity = 65/117 (55.56%), Postives = 87/117 (74.36%), Query Frame = 1 

		  

Query: 7   QALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSVNPDFFDFH 66
           +A NV+V G+GE  +VL HGFGTDQS W+ ++P+    YRV+LYD   AG+ NPD+FDF 
Sbjct: 6   EAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFD 65

Query: 67  RYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVGASP 124
           RY+ L+ Y  DL+ IL+ L +  C +VGHSVSAMIG+LAS+ R DLFSK +++ ASP
Sbjct: 66  RYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISASP 122
[Close]
BLAST of Spo08874.1 vs. TAIR (Arabidopsis)
Match: AT3G24420.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 107.5 bits (267), Expect = 6.100e-24
Identity = 48/120 (40.00%), Postives = 81/120 (67.50%), Query Frame = 1 

		  

Query: 5   LLQALNVRVEGTGEKYLVLAHGFGTDQSAWQRILPYFTPYYRVILYDLACAGSV-NPDFF 64
           L  A+N ++ G+GE+ +VLAHGFG DQS W +I+P  +  ++V+++D   +G++ +   +
Sbjct: 10  LASAMNAKIIGSGERSMVLAHGFGGDQSVWDKIIPVLSQSFKVLVFDWLFSGAIKDQTLY 69

Query: 65  DFHRYTTLDAYVDDLLDILDALAVTRCAYVGHSVSAMIGLLASIRRRDLFSKQILVGASP 124
           D  +Y +LD + DDL+ +++ L      +VGHS+S +IG  ASI+R DLF+  +L+ ASP
Sbjct: 70  DPSKYNSLDVFSDDLIALMEELKFGPVVFVGHSMSGVIGCAASIKRPDLFTNLLLIAASP 129
The following BLAST results are available for this feature:
BLAST of Spo08874.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902214245|gb|KNA17451.1|5.7e-64100.hypothetical protein SOVF_0798... [more]
gi|731314724|ref|XP_010688104.1|1.3e-6095.1PREDICTED: probable strigolact... [more]
gi|590597067|ref|XP_007018509.1|2.0e-5383.7Alpha/beta-Hydrolases superfam... [more]
gi|950995456|ref|XP_014505398.1|2.9e-5282.1PREDICTED: probable strigolact... [more]
gi|920705721|gb|KOM48946.1|2.9e-5282.1hypothetical protein LR48_Viga... [more]
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BLAST of Spo08874.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RD40_SPIOL4.0e-64100.Uncharacterized protein OS=Spi... [more]
A0A0J8D481_BETVU9.2e-6195.1Uncharacterized protein OS=Bet... [more]
A0A061FMM2_THECC1.4e-5383.7Alpha/beta-Hydrolases superfam... [more]
A0A0L9V1Y9_PHAAN2.0e-5282.1Uncharacterized protein OS=Pha... [more]
A0A0S3RQ85_PHAAN2.0e-5282.1Uncharacterized protein OS=Vig... [more]
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BLAST of Spo08874.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DAD2_PETHY7.2e-5179.6Probable strigolactone esteras... [more]
D14_ARATH1.5e-4875.0Strigolactone esterase D14 OS=... [more]
D14_ORYSJ2.2e-4773.7Strigolactone esterase D14 OS=... [more]
KAI2_ARATH5.2e-3355.5Probable esterase KAI2 OS=Arab... [more]
D14L_ORYSJ3.4e-3257.6Probable esterase D14L OS=Oryz... [more]
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BLAST of Spo08874.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G03990.18.5e-5075.0alpha/beta-Hydrolases superfam... [more]
AT4G37470.12.9e-3455.5alpha/beta-Hydrolases superfam... [more]
AT3G24420.16.1e-2440.0alpha/beta-Hydrolases superfam... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000073Alpha/beta hydrolase fold-1PFAMPF12697Abhydrolase_6coord: 21..120
score: 1.
NoneNo IPR availablePANTHERPTHR10992ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEINcoord: 9..123
score: 3.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006574 valine catabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0019521 D-gluconate metabolic process
biological_process GO:0009639 response to red or far red light
biological_process GO:0050789 regulation of biological process
biological_process GO:0007275 multicellular organism development
biological_process GO:0009987 cellular process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015824 proline transport
biological_process GO:0009308 amine metabolic process
biological_process GO:0009611 response to wounding
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0010223 secondary shoot formation
biological_process GO:1901601 strigolactone biosynthetic process
biological_process GO:0009811 stilbene biosynthetic process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005829 cytosol
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0005886 plasma membrane
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0008442 3-hydroxyisobutyrate dehydrogenase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0016207 4-coumarate-CoA ligase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0080048 GDP-D-glucose phosphorylase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity
RNA-Seq Expression