Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTAATTATCAATTAATTAAGAAAATTAAATTAACAAGTAATTATCTTAGGAGCAATGAATGATGATTTTAAAACAATTAAGGAAAAAATCATTCTCAACAGTCCAGCCCTTGCTGAGGTTAGTTATATACATATTATTGTTCTTACAATTAATTTTTTGTGTAGTTAATTTTATGAAAATTTGATTATTAAATTGTTTTTTTGTTGTTGTTGAATAACGGCAGTATATCTTGAAAACCAGTGGTTACCCCAATGAGCACGAGCAATTGAAGGAAATTAGAGAGACCACTATTGAGAAATACAAGCACATGTGATTTATCTTTCTCTTCCTCTTTATTCGTTCTATCTATCTTTCTCTACTCTATCAATCTATACAGATACTTACCAGTTGTATATATCTTGTATGAGCTTGGTGTTCAATTTTAAATGAGTAAATAAGTAAAGAAAATAGTTCAATCTGGTATAACCGGTTATACTATGCATGAGCGGACGTTATATTCCTCTAGACTTATACTTAACTATTTTAGTTATAATTTGAACTTTAGAGCTTATTTTCCTTATTAACTAAACTTAATTTTCTTGGTATAATTGAAATTTGAAAATAAGGTGAACCATAAAACATGGCCTTAGAGATGTGCAAATTAAATACTTGGTATGATATGTGGAATATTCCAATTTTATGAGATGTCGCATACATGCTAATATAACGGTTTTAGTGTACTCCATATACACTAACTAAGAGTACGAAAATGTGGTATGTTGACAAAATTGAATTGAATGAGGTTACTTAAATAATTGTGTGTGTGGATTGATATCCAGGAGCATCATGAACGCAGCAGTTGATGAAACACAATTCCTTGCAATGTTATTGAAGCTCATGAACGCCAAAAACACTTTGGAAATTGGAGTTTTTACCGGCTATTCACTTCTTGCTACTGCACTCGCTCTCCCTGATGATGGCAAGGTAAAATATTAATAAAATTTTAGGAAGTAAATATTTGCCTAAATATTATTAGGGAAATATATGTAATTTTGTATAATTGGGAAGTGTCATCAAGCTAGAGCCACATTAATTCATCTAGATACTCGTTCATAATGAGTAACTTTTACTTATCAGGGCCTCGGGGCACAAAGTGTTAGGAGACTGATTAACACTTATTTGTATGATTATATGTACGTAGGTTCTAGCAGTTGATCCGAACAGAGAGGCTTACGAGGTTGGATTGCCATCCATTAAAAAGGCCGGAATTGAACACAAAATCGAGTTTGTTCAAGGAAATGCCATGCCATTTTTGAATGACCTAGTAAGCAAGGTACACAAGTGAGAAGTATATTTTTGAAATAATTGGTTTGTAGAAAAATAGCTAGTTTTGTGTAACAAATAAAATAAAATATATTTTATTGCTGCAGGGCAAGGAAGGGAGCTTTGATTTTGCATTCGTGGACGCGGATAAGGAGAACTACATAAATTACCATGAGCCATTGATGAAACTAGTAAAGGTTGGAGGAGTAATAGCATTTGATAACACTCTTTGGTTTGGTTCAGTTGCATTTGCTGATGATGATCAAGTGTTCAAGAATGATCCTGTTATGGAATACATTAAAAAACATGGACATGAAGCAATTAAGAACTTGAATACTTTCCTTGCTACTGACCCTAGAATTGAGTCTGTCCTTCTTTCTATTGGTGACGGTCTTACGCTTTGTAGGCGTAAGTACTGATCTCCGGAAATTATTTACTCTACGGATATATATGCTCATTTGAGGAAGTTCTAACTTCTAAATCAGCAAAGAAATAATATTGGTTGTATCGTGTATAAGATACACCAGGTTGTGGAAAATAAATGTTGTCATTTGTATGAATAACAAAAACTCTATTATCGTGTCTTTTGAACAAACATGC CCTAATTATCAATTAATTAAGAAAATTAAATTAACAAGTAATTATCTTAGGAGCAATGAATGATGATTTTAAAACAATTAAGGAAAAAATCATTCTCAACAGTCCAGCCCTTGCTGAGTATATCTTGAAAACCAGTGGTTACCCCAATGAGCACGAGCAATTGAAGGAAATTAGAGAGACCACTATTGAGAAATACAAGCACATGAGCATCATGAACGCAGCAGTTGATGAAACACAATTCCTTGCAATGTTATTGAAGCTCATGAACGCCAAAAACACTTTGGAAATTGGAGTTTTTACCGGCTATTCACTTCTTGCTACTGCACTCGCTCTCCCTGATGATGGCAAGGTTCTAGCAGTTGATCCGAACAGAGAGGCTTACGAGGTTGGATTGCCATCCATTAAAAAGGCCGGAATTGAACACAAAATCGAGTTTGTTCAAGGAAATGCCATGCCATTTTTGAATGACCTAGTAAGCAAGGGCAAGGAAGGGAGCTTTGATTTTGCATTCGTGGACGCGGATAAGGAGAACTACATAAATTACCATGAGCCATTGATGAAACTAGTAAAGGTTGGAGGAGTAATAGCATTTGATAACACTCTTTGGTTTGGTTCAGTTGCATTTGCTGATGATGATCAAGTGTTCAAGAATGATCCTGTTATGGAATACATTAAAAAACATGGACATGAAGCAATTAAGAACTTGAATACTTTCCTTGCTACTGACCCTAGAATTGAGTCTGTCCTTCTTTCTATTGGTGACGGTCTTACGCTTTGTAGGCGTAAGTACTGATCTCCGGAAATTATTTACTCTACGGATATATATGCTCATTTGAGGAAGTTCTAACTTCTAAATCAGCAAAGAAATAATATTGGTTGTATCGTGTATAAGATACACCAGGTTGTGGAAAATAAATGTTGTCATTTGTATGAATAACAAAAACTCTATTATCGTGTCTTTTGAACAAACATGC ATGAATGATGATTTTAAAACAATTAAGGAAAAAATCATTCTCAACAGTCCAGCCCTTGCTGAGTATATCTTGAAAACCAGTGGTTACCCCAATGAGCACGAGCAATTGAAGGAAATTAGAGAGACCACTATTGAGAAATACAAGCACATGAGCATCATGAACGCAGCAGTTGATGAAACACAATTCCTTGCAATGTTATTGAAGCTCATGAACGCCAAAAACACTTTGGAAATTGGAGTTTTTACCGGCTATTCACTTCTTGCTACTGCACTCGCTCTCCCTGATGATGGCAAGGTTCTAGCAGTTGATCCGAACAGAGAGGCTTACGAGGTTGGATTGCCATCCATTAAAAAGGCCGGAATTGAACACAAAATCGAGTTTGTTCAAGGAAATGCCATGCCATTTTTGAATGACCTAGTAAGCAAGGGCAAGGAAGGGAGCTTTGATTTTGCATTCGTGGACGCGGATAAGGAGAACTACATAAATTACCATGAGCCATTGATGAAACTAGTAAAGGTTGGAGGAGTAATAGCATTTGATAACACTCTTTGGTTTGGTTCAGTTGCATTTGCTGATGATGATCAAGTGTTCAAGAATGATCCTGTTATGGAATACATTAAAAAACATGGACATGAAGCAATTAAGAACTTGAATACTTTCCTTGCTACTGACCCTAGAATTGAGTCTGTCCTTCTTTCTATTGGTGACGGTCTTACGCTTTGTAGGCGTAAGTACTGA MNDDFKTIKEKIILNSPALAEYILKTSGYPNEHEQLKEIRETTIEKYKHMSIMNAAVDETQFLAMLLKLMNAKNTLEIGVFTGYSLLATALALPDDGKVLAVDPNREAYEVGLPSIKKAGIEHKIEFVQGNAMPFLNDLVSKGKEGSFDFAFVDADKENYINYHEPLMKLVKVGGVIAFDNTLWFGSVAFADDDQVFKNDPVMEYIKKHGHEAIKNLNTFLATDPRIESVLLSIGDGLTLCRRKY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08889.1 vs. NCBI nr
Match: gi|902181023|gb|KNA09655.1| (hypothetical protein SOVF_151580 [Spinacia oleracea]) HSP 1 Score: 492.7 bits (1267), Expect = 3.800e-136 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo08889.1 vs. NCBI nr
Match: gi|902155639|gb|KNA05927.1| (hypothetical protein SOVF_185800 [Spinacia oleracea]) HSP 1 Score: 416.0 bits (1068), Expect = 4.600e-113 Identity = 198/245 (80.82%), Postives = 226/245 (92.24%), Query Frame = 1
BLAST of Spo08889.1 vs. NCBI nr
Match: gi|731343221|ref|XP_010682786.1| (PREDICTED: flavonoid 3',5'-methyltransferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 398.3 bits (1022), Expect = 9.800e-108 Identity = 192/242 (79.34%), Postives = 219/242 (90.50%), Query Frame = 1
BLAST of Spo08889.1 vs. NCBI nr
Match: gi|902202070|gb|KNA14162.1| (hypothetical protein SOVF_110060 [Spinacia oleracea]) HSP 1 Score: 394.0 bits (1011), Expect = 1.900e-106 Identity = 186/238 (78.15%), Postives = 217/238 (91.18%), Query Frame = 1
BLAST of Spo08889.1 vs. NCBI nr
Match: gi|902237157|gb|KNA24667.1| (hypothetical protein SOVF_013540 [Spinacia oleracea]) HSP 1 Score: 332.0 bits (850), Expect = 8.600e-88 Identity = 163/241 (67.63%), Postives = 197/241 (81.74%), Query Frame = 1
BLAST of Spo08889.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QR22_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151580 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 2.700e-136 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo08889.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QF85_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_185800 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 3.200e-113 Identity = 198/245 (80.82%), Postives = 226/245 (92.24%), Query Frame = 1
BLAST of Spo08889.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C131_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g150930 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 6.800e-108 Identity = 192/242 (79.34%), Postives = 219/242 (90.50%), Query Frame = 1
BLAST of Spo08889.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5U3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_110060 PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 1.300e-106 Identity = 186/238 (78.15%), Postives = 217/238 (91.18%), Query Frame = 1
BLAST of Spo08889.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0N3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_013540 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 6.000e-88 Identity = 163/241 (67.63%), Postives = 197/241 (81.74%), Query Frame = 1
BLAST of Spo08889.1 vs. ExPASy Swiss-Prot
Match: FAOMT_VITVI (Flavonoid 3',5'-methyltransferase OS=Vitis vinifera GN=FAOMT PE=1 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 8.700e-80 Identity = 144/234 (61.54%), Postives = 186/234 (79.49%), Query Frame = 1
BLAST of Spo08889.1 vs. ExPASy Swiss-Prot
Match: CAMT_EUCGU (Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gunnii PE=2 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.600e-70 Identity = 138/237 (58.23%), Postives = 176/237 (74.26%), Query Frame = 1
BLAST of Spo08889.1 vs. ExPASy Swiss-Prot
Match: CAMT_POPKI (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 4.800e-70 Identity = 135/233 (57.94%), Postives = 173/233 (74.25%), Query Frame = 1
BLAST of Spo08889.1 vs. ExPASy Swiss-Prot
Match: CAMT1_EUCGL (Caffeoyl-CoA O-methyltransferase 1 OS=Eucalyptus globulus GN=CCOMT PE=2 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.400e-69 Identity = 137/237 (57.81%), Postives = 176/237 (74.26%), Query Frame = 1
BLAST of Spo08889.1 vs. ExPASy Swiss-Prot
Match: CAMT1_ARATH (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=At1g67980 PE=2 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 5.300e-69 Identity = 135/236 (57.20%), Postives = 177/236 (75.00%), Query Frame = 1
BLAST of Spo08889.1 vs. TAIR (Arabidopsis)
Match: AT1G67980.1 (caffeoyl-CoA 3-O-methyltransferase) HSP 1 Score: 262.3 bits (669), Expect = 3.000e-70 Identity = 135/236 (57.20%), Postives = 177/236 (75.00%), Query Frame = 1
BLAST of Spo08889.1 vs. TAIR (Arabidopsis)
Match: AT4G34050.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 254.6 bits (649), Expect = 6.200e-68 Identity = 132/238 (55.46%), Postives = 175/238 (73.53%), Query Frame = 1
BLAST of Spo08889.1 vs. TAIR (Arabidopsis)
Match: AT1G67990.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 249.6 bits (636), Expect = 2.000e-66 Identity = 124/236 (52.54%), Postives = 175/236 (74.15%), Query Frame = 1
BLAST of Spo08889.1 vs. TAIR (Arabidopsis)
Match: AT4G26220.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 228.0 bits (580), Expect = 6.200e-60 Identity = 123/237 (51.90%), Postives = 162/237 (68.35%), Query Frame = 1
BLAST of Spo08889.1 vs. TAIR (Arabidopsis)
Match: AT1G24735.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 208.8 bits (530), Expect = 3.900e-54 Identity = 109/193 (56.48%), Postives = 136/193 (70.47%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08889.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08889.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08889.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08889.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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