Spo08990 (gene)

Overview
NameSpo08990
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionDUF668 family protein
LocationSpoScf_18718 : 64 .. 1699 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCCACCAAGAGGATCGTCATTTATAGGAAGAGCTAGCTTTGCTGGACTAGAGAAGGTTGTTGACGTCTTGGATACACTTGGAAGTGGAATGATAAACTTGAGTCATAGTGGATTTCTGACAGGTAGGTTGGCCAAGGGAAACAAAATATCAATATTGGCATTTGAAGTAGCAAACACTATCACACGTAGGAGTGAATCTCATGCAATCTCTCTCCAAGGAAAATGTCAACTTCATAAAGGAGGAGGTTATTCCCTCAGAAGGGGTTCAGTACTTGGTTTCTTCAGACACTAAGGTGTTGCTAAGTTTGGTTGCTTCAGACAAAAGGTTGTTATAGGGAACTTTTTACAGGAAATTCACTTTTCAACATCTTTGTTCCCTATTACAAATCTAACTTATATTGTTCGATCTAGGGAGGAACTTGACGTCTTTTGCAAAGAAGTGATCAGATTTGGCGACCGTTGTAAAGACCCACAATGGCATAACTTGGATCGGTTTTTTCAAAAGTAAGGTAGATTCTTTTTGTTTTGTATTCTACTGAAGCTGTTTAGTTTATTTCTAACTGAATTTGTATCCTCCTTGGAATTGGCTGTGCTATTTCAGTTTGGATTCCGAAAATGCGGTATACAAACCTCAAAGAGAACAGGTAGAAGCCAAAATGCAAGATTTGATGACTTTAGCTCATAATACCTCTGTAAGTGAATTTAATTTTGATTTTCACTTTTTCTCTCTTTAACATTAATTGGACTTTGGGATGAGGCAAATAAGATTCAGAAACCTGAACATTTGATTGCTTCTTGCTTCTTTTATTGGTAGTGTTGTATGCTACCTTTGTGAAATTCAACCTAACGCATCTTTCCATTCAAACCCAAGCTGCACTCTCAATAGATTTATATGGGTGGGGACTTAAATCTTCACCACTTTATTGTTAAATGCTGAGTGCTCAATCTAGATTATGAGAAGATGTTCAAGCACATTGATGTGCAAGGAGGCTGACCATTTTGGGGTAGCTGCATGCGTTTCTTTTTCGAGTTATTGATCTGGGTGACAGCAGTTGGATTTCATATGTGCATTCCAGGGTGTGCTGAAAACAGTTACCATTTTTGTGTGTGTAGGAATTGTACCATGAGCTGAATGCTTTTGACAGATTTGAGCAGGATTATAGGCAGAAGGTTGAAGAATTGAAGTCCTTAAAGTTGCCTCGCAAAGGTTAGTCTTTTCAGTTAGACTGTGAAATTTAACACTTGAAACATCTCTTGGCTATTTGTCAGTGTGTATGGTGCATTAATTTACTTCTTCCCCTCTTCCCTCTCCAATTGTGATTCTCATTATTGTATCCGGAGAGTTCAGTCTTCTTTCTGCTTCTTCTACTTGGTGCTTTTGAAGCATAAGCTAAGCTGATAATTTTGGTACCTCTATAAAGCATATTTTTTTCCAGGGCTGTTGTAGTTTGAAAATGTATTAAGGACGTGGTTAAATATTGGATGATTAGCCTTTTAGCCACTAGTGTCTCGGCTACAGAAATTTCATACTATCCAACTCGGTCCTTCAGAAATGCGTTGTCCGATATCGTAATATTTCTTTGAGGTCTGTGAGAGACTTTTTGTTTCAATAAACCTCCAATTATGCACAAGGG

mRNA sequence

GCTCCACCAAGAGGATCGTCATTTATAGGAAGAGCTAGCTTTGCTGGACTAGAGAAGGTTGTTGACGTCTTGGATACACTTGGAAGTGGAATGATAAACTTGAGTCATAGTGGATTTCTGACAGGAGTGAATCTCATGCAATCTCTCTCCAAGGAAAATGTCAACTTCATAAAGGAGGAGGTTATTCCCTCAGAAGGGGTTCAGTACTTGGTTTCTTCAGACACTAAGGTGTTGCTAAGTTTGGTTGCTTCAGACAAAAGGGAGGAACTTGACGTCTTTTGCAAAGAAGTGATCAGATTTGGCGACCGTTGTAAAGACCCACAATGGCATAACTTGGATCGTTTGGATTCCGAAAATGCGGTATACAAACCTCAAAGAGAACAGGTAGAAGCCAAAATGCAAGATTTGATGACTTTAGCTCATAATACCTCTGAATTGTACCATGAGCTGAATGCTTTTGACAGATTTGAGCAGGATTATAGGCAGAAGGTTGAAGAATTGAAGTCCTTAAAGTTGCCTCGCAAAGGTTAGTCTTTTCAGTTAGACTGTGAAATTTAACACTTGAAACATCTCTTGGCTATTTGTCAGTGTGTATGGTGCATTAATTTACTTCTTCCCCTCTTCCCTCTCCAATTGTGATTCTCATTATTGTATCCGGAGAGTTCAGTCTTCTTTCTGCTTCTTCTACTTGGTGCTTTTGAAGCATAAGCTAAGCTGATAATTTTGGTACCTCTATAAAGCATATTTTTTTCCAGGGCTGTTGTAGTTTGAAAATGTATTAAGGACGTGGTTAAATATTGGATGATTAGCCTTTTAGCCACTAGTGTCTCGGCTACAGAAATTTCATACTATCCAACTCGGTCCTTCAGAAATGCGTTGTCCGATATCGTAATATTTCTTTGAGGTCTGTGAGAGACTTTTTGTTTCAATAAACCTCCAATTATGCACAAGGG

Coding sequence (CDS)

GCTCCACCAAGAGGATCGTCATTTATAGGAAGAGCTAGCTTTGCTGGACTAGAGAAGGTTGTTGACGTCTTGGATACACTTGGAAGTGGAATGATAAACTTGAGTCATAGTGGATTTCTGACAGGAGTGAATCTCATGCAATCTCTCTCCAAGGAAAATGTCAACTTCATAAAGGAGGAGGTTATTCCCTCAGAAGGGGTTCAGTACTTGGTTTCTTCAGACACTAAGGTGTTGCTAAGTTTGGTTGCTTCAGACAAAAGGGAGGAACTTGACGTCTTTTGCAAAGAAGTGATCAGATTTGGCGACCGTTGTAAAGACCCACAATGGCATAACTTGGATCGTTTGGATTCCGAAAATGCGGTATACAAACCTCAAAGAGAACAGGTAGAAGCCAAAATGCAAGATTTGATGACTTTAGCTCATAATACCTCTGAATTGTACCATGAGCTGAATGCTTTTGACAGATTTGAGCAGGATTATAGGCAGAAGGTTGAAGAATTGAAGTCCTTAAAGTTGCCTCGCAAAGGTTAG

Protein sequence

APPRGSSFIGRASFAGLEKVVDVLDTLGSGMINLSHSGFLTGVNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGDRCKDPQWHNLDRLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFEQDYRQKVEELKSLKLPRKG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo08990.1Spo08990.1mRNA


Homology
[Close]
BLAST of Spo08990.1 vs. NCBI nr
Match: gi|731360534|ref|XP_010691873.1| (PREDICTED: uncharacterized protein LOC104905122 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 287.3 bits (734), Expect = 1.800e-74
Identity = 156/201 (77.61%), Postives = 162/201 (80.60%), Query Frame = 1 

		  

Query: 2   PPRGSSFIGRASFAGLEKVVDVLDTLGSGMINLSHSGFLTG------------------- 61
           PPR SSFIGRASFAGLEK VDVLD LGSGM NLS+SGFLTG                   
Sbjct: 88  PPRESSFIGRASFAGLEKAVDVLDALGSGMTNLSNSGFLTGKATKGNKISILAFEVANTI 147

Query: 62  ---VNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIR 121
              VNLMQSLSKENV FIKEEV+PSEGVQ+LVS DTKVLLSL ASDKREELDVFCKEVIR
Sbjct: 148 TRGVNLMQSLSKENVRFIKEEVVPSEGVQHLVSLDTKVLLSLAASDKREELDVFCKEVIR 207

Query: 122 FGDRCKDPQWHNLDR----LDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDR 177
           FGD CKDPQWHNL+R    LDSENAV  PQREQVEAKMQ+LM L  +TSELYHELNAFDR
Sbjct: 208 FGDLCKDPQWHNLNRYFAKLDSENAVGGPQREQVEAKMQELMALVQHTSELYHELNAFDR 267
[Close]
BLAST of Spo08990.1 vs. NCBI nr
Match: gi|902195677|gb|KNA12923.1| (hypothetical protein SOVF_121900 [Spinacia oleracea])

HSP 1 Score: 253.4 bits (646), Expect = 2.800e-64
Identity = 161/283 (56.89%), Postives = 164/283 (57.95%), Query Frame = 1 

		  

Query: 1   APPRGSSFIGRASFAGLEKVVDVL---------------DTLGSGMINLSHSGFLTG--- 60
           APPRGSSFIGRASFAGLEKVVDVL               DTLGSGM NLSHSGFLTG   
Sbjct: 81  APPRGSSFIGRASFAGLEKVVDVLXRASFAGLEKAVDVLDTLGSGMTNLSHSGFLTGRVA 140

Query: 61  -------------------VNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVA 120
                              VNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVA
Sbjct: 141 KGNKISILAFEVANTITRGVNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVA 200

Query: 121 SDKREELDVFCKEVIRFGDRCKDPQWHNLDR----LDSENAVYKPQREQ----------- 177
           SDKREELDVFCKEVIRFGDRCKDPQWHNLDR    LDSENAVYKPQREQ           
Sbjct: 201 SDKREELDVFCKEVIRFGDRCKDPQWHNLDRFFQNLDSENAVYKPQREQEIHFSTSLFPI 260
[Close]
BLAST of Spo08990.1 vs. NCBI nr
Match: gi|565350193|ref|XP_006342058.1| (PREDICTED: uncharacterized protein LOC102599988 [Solanum tuberosum])

HSP 1 Score: 217.6 bits (553), Expect = 1.700e-53
Identity = 113/197 (57.36%), Postives = 142/197 (72.08%), Query Frame = 1 

		  

Query: 6   SSFIGRASFAGLEKVVDVLDTLGSGMINLSHSGFLTGV---------------------- 65
           SSF+G+AS  GLEK V+VLDTLGS M NL+  GF+TG+                      
Sbjct: 86  SSFLGKASIVGLEKAVEVLDTLGSSMTNLNSGGFMTGMTSRGNKIAILAFEVANTITKGA 145

Query: 66  NLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGDR 125
           NL+QSLSKENV ++K+E++PS+GVQ LVS++ K LL++ A+DKREE D+F +EVIRFGD 
Sbjct: 146 NLLQSLSKENVEYLKKEILPSKGVQQLVSTNMKELLTIAAADKREEFDIFSREVIRFGDM 205

Query: 126 CKDPQWHNLD----RLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFEQD 177
           CKDPQWHNL+    RLDS+   +K  R + E  MQ+L TLA +TSELYHEL+A DRFEQD
Sbjct: 206 CKDPQWHNLNRYFSRLDSDTLTHKQLRSEAELMMQELSTLAQHTSELYHELHALDRFEQD 265
[Close]
BLAST of Spo08990.1 vs. NCBI nr
Match: gi|970020787|ref|XP_015071639.1| (PREDICTED: uncharacterized protein LOC107015754 [Solanum pennellii])

HSP 1 Score: 214.9 bits (546), Expect = 1.100e-52
Identity = 111/197 (56.35%), Postives = 141/197 (71.57%), Query Frame = 1 

		  

Query: 6   SSFIGRASFAGLEKVVDVLDTLGSGMINLSHSGFLTGV---------------------- 65
           SSF+G+AS  GLEK V+VLDTLGS M NL+  GF++G                       
Sbjct: 86  SSFLGKASIVGLEKAVEVLDTLGSSMTNLNSGGFMSGTASRGSKISILAYEVANTITKGA 145

Query: 66  NLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGDR 125
           NL+QSLSKENV ++K+E++PS+GVQ LVS++ K LL++ A+DKREE D+F +EVIRFGD 
Sbjct: 146 NLLQSLSKENVEYLKKEILPSKGVQQLVSTNMKELLTIAAADKREEFDIFSREVIRFGDM 205

Query: 126 CKDPQWHNLD----RLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFEQD 177
           CKDPQWHNL+    RLDS+   +K  R + E  MQ+L TLA +TSELYHE++A DRFEQD
Sbjct: 206 CKDPQWHNLNRYFSRLDSDTLTHKQLRSEAELMMQELSTLAQHTSELYHEMHALDRFEQD 265
[Close]
BLAST of Spo08990.1 vs. NCBI nr
Match: gi|460385344|ref|XP_004238364.1| (PREDICTED: uncharacterized protein LOC101264621 [Solanum lycopersicum])

HSP 1 Score: 214.9 bits (546), Expect = 1.100e-52
Identity = 111/197 (56.35%), Postives = 141/197 (71.57%), Query Frame = 1 

		  

Query: 6   SSFIGRASFAGLEKVVDVLDTLGSGMINLSHSGFLTGV---------------------- 65
           SSF+G+AS  GLEK V+VLDTLGS M NL+  GF++G                       
Sbjct: 86  SSFLGKASIVGLEKAVEVLDTLGSSMTNLNSGGFMSGTTSRGNKISILAYEVANTITKGA 145

Query: 66  NLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGDR 125
           NL+QSLSKENV ++K+E++PS+GVQ LVS++ K LL++ A+DKREE D+F +EVIRFGD 
Sbjct: 146 NLLQSLSKENVEYLKKEILPSKGVQQLVSTNMKELLTIAAADKREEFDIFSREVIRFGDM 205

Query: 126 CKDPQWHNLD----RLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFEQD 177
           CKDPQWHNL+    RLDS+   +K  R + E  MQ+L TLA +TSELYHE++A DRFEQD
Sbjct: 206 CKDPQWHNLNRYFSRLDSDTLTHKQLRSEAELMMQELSTLAQHTSELYHEMHALDRFEQD 265
[Close]
BLAST of Spo08990.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EB67_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016360 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.200e-74
Identity = 156/201 (77.61%), Postives = 162/201 (80.60%), Query Frame = 1 

		  

Query: 2   PPRGSSFIGRASFAGLEKVVDVLDTLGSGMINLSHSGFLTG------------------- 61
           PPR SSFIGRASFAGLEK VDVLD LGSGM NLS+SGFLTG                   
Sbjct: 88  PPRESSFIGRASFAGLEKAVDVLDALGSGMTNLSNSGFLTGKATKGNKISILAFEVANTI 147

Query: 62  ---VNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIR 121
              VNLMQSLSKENV FIKEEV+PSEGVQ+LVS DTKVLLSL ASDKREELDVFCKEVIR
Sbjct: 148 TRGVNLMQSLSKENVRFIKEEVVPSEGVQHLVSLDTKVLLSLAASDKREELDVFCKEVIR 207

Query: 122 FGDRCKDPQWHNLDR----LDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDR 177
           FGD CKDPQWHNL+R    LDSENAV  PQREQVEAKMQ+LM L  +TSELYHELNAFDR
Sbjct: 208 FGDLCKDPQWHNLNRYFAKLDSENAVGGPQREQVEAKMQELMALVQHTSELYHELNAFDR 267
[Close]
BLAST of Spo08990.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R087_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121900 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.000e-64
Identity = 161/283 (56.89%), Postives = 164/283 (57.95%), Query Frame = 1 

		  

Query: 1   APPRGSSFIGRASFAGLEKVVDVL---------------DTLGSGMINLSHSGFLTG--- 60
           APPRGSSFIGRASFAGLEKVVDVL               DTLGSGM NLSHSGFLTG   
Sbjct: 81  APPRGSSFIGRASFAGLEKVVDVLXRASFAGLEKAVDVLDTLGSGMTNLSHSGFLTGRVA 140

Query: 61  -------------------VNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVA 120
                              VNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVA
Sbjct: 141 KGNKISILAFEVANTITRGVNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVA 200

Query: 121 SDKREELDVFCKEVIRFGDRCKDPQWHNLDR----LDSENAVYKPQREQ----------- 177
           SDKREELDVFCKEVIRFGDRCKDPQWHNLDR    LDSENAVYKPQREQ           
Sbjct: 201 SDKREELDVFCKEVIRFGDRCKDPQWHNLDRFFQNLDSENAVYKPQREQEIHFSTSLFPI 260
[Close]
BLAST of Spo08990.1 vs. UniProtKB/TrEMBL
Match: M1ALK7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009867 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.200e-53
Identity = 113/197 (57.36%), Postives = 142/197 (72.08%), Query Frame = 1 

		  

Query: 6   SSFIGRASFAGLEKVVDVLDTLGSGMINLSHSGFLTGV---------------------- 65
           SSF+G+AS  GLEK V+VLDTLGS M NL+  GF+TG+                      
Sbjct: 86  SSFLGKASIVGLEKAVEVLDTLGSSMTNLNSGGFMTGMTSRGNKIAILAFEVANTITKGA 145

Query: 66  NLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGDR 125
           NL+QSLSKENV ++K+E++PS+GVQ LVS++ K LL++ A+DKREE D+F +EVIRFGD 
Sbjct: 146 NLLQSLSKENVEYLKKEILPSKGVQQLVSTNMKELLTIAAADKREEFDIFSREVIRFGDM 205

Query: 126 CKDPQWHNLD----RLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFEQD 177
           CKDPQWHNL+    RLDS+   +K  R + E  MQ+L TLA +TSELYHEL+A DRFEQD
Sbjct: 206 CKDPQWHNLNRYFSRLDSDTLTHKQLRSEAELMMQELSTLAQHTSELYHELHALDRFEQD 265
[Close]
BLAST of Spo08990.1 vs. UniProtKB/TrEMBL
Match: A0A0V0IPN4_SOLCH (Putative elongation factor G-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.000e-53
Identity = 113/197 (57.36%), Postives = 142/197 (72.08%), Query Frame = 1 

		  

Query: 6   SSFIGRASFAGLEKVVDVLDTLGSGMINLSHSGFLTGV---------------------- 65
           SSF+G+AS  GLEK V+VLDTLGS M NL+  GF+TG+                      
Sbjct: 86  SSFLGKASIVGLEKAVEVLDTLGSSMTNLNSGGFMTGMTSRGNKISILAFEVANTITKGA 145

Query: 66  NLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGDR 125
           NL+QSLSKENV ++K+E++PS+GVQ LVS++ K LL++ A+DKREE D+F +EVIRFGD 
Sbjct: 146 NLLQSLSKENVEYLKKEILPSKGVQQLVSTNMKELLTIAAADKREEFDIFSREVIRFGDM 205

Query: 126 CKDPQWHNLD----RLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFEQD 177
           CKDPQWHNL+    RLDS+   +K  R + E  MQ+L TLA +TSELYHEL+A DRFEQD
Sbjct: 206 CKDPQWHNLNRYFSRLDSDTLSHKQLRSEAELMMQELSTLAQHTSELYHELHALDRFEQD 265
[Close]
BLAST of Spo08990.1 vs. UniProtKB/TrEMBL
Match: K4BVN0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.700e-53
Identity = 111/197 (56.35%), Postives = 141/197 (71.57%), Query Frame = 1 

		  

Query: 6   SSFIGRASFAGLEKVVDVLDTLGSGMINLSHSGFLTGV---------------------- 65
           SSF+G+AS  GLEK V+VLDTLGS M NL+  GF++G                       
Sbjct: 86  SSFLGKASIVGLEKAVEVLDTLGSSMTNLNSGGFMSGTTSRGNKISILAYEVANTITKGA 145

Query: 66  NLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGDR 125
           NL+QSLSKENV ++K+E++PS+GVQ LVS++ K LL++ A+DKREE D+F +EVIRFGD 
Sbjct: 146 NLLQSLSKENVEYLKKEILPSKGVQQLVSTNMKELLTIAAADKREEFDIFSREVIRFGDM 205

Query: 126 CKDPQWHNLD----RLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFEQD 177
           CKDPQWHNL+    RLDS+   +K  R + E  MQ+L TLA +TSELYHE++A DRFEQD
Sbjct: 206 CKDPQWHNLNRYFSRLDSDTLTHKQLRSEAELMMQELSTLAQHTSELYHEMHALDRFEQD 265
[Close]
BLAST of Spo08990.1 vs. TAIR (Arabidopsis)
Match: AT1G30755.1 (Protein of unknown function (DUF668))

HSP 1 Score: 186.0 bits (471), Expect = 1.900e-47
Identity = 105/199 (52.76%), Postives = 137/199 (68.84%), Query Frame = 1 

		  

Query: 6   SSFIGRASFAGLEKVVDVLDTLGSGMINLSHS-GFLTGVN-------------------- 65
           +SF+GRA   GLEK V+VLDTLGS M  ++ S  +L+GV                     
Sbjct: 88  NSFMGRAGVMGLEKAVEVLDTLGSSMTRMNPSNAYLSGVTSSRGGKVTILAFEVANTIAK 147

Query: 66  ---LMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFG 125
              L+QSLS+EN+ F+K++++ SE V+ LVS+DT  L  L ASDKREELD+F  EVIRFG
Sbjct: 148 GAALLQSLSEENLKFMKKDMLHSEEVKKLVSTDTTELQILAASDKREELDLFSGEVIRFG 207

Query: 126 DRCKDPQWHNLDR----LDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFE 177
           + CKD QWHNLDR    LD+EN+ +K  ++  EA+MQ+L+TLA  TSELYHEL A DRFE
Sbjct: 208 NMCKDLQWHNLDRYFMKLDTENSQHKLLKDDAEARMQELVTLARITSELYHELQALDRFE 267
[Close]
BLAST of Spo08990.1 vs. TAIR (Arabidopsis)
Match: AT1G34320.1 (Protein of unknown function (DUF668))

HSP 1 Score: 168.3 bits (425), Expect = 4.200e-42
Identity = 93/198 (46.97%), Postives = 124/198 (62.63%), Query Frame = 1 

		  

Query: 6   SSFIGRASFAGLEKVVDVLDTLGSGMINLSHSG-----------------------FLTG 65
           SS +GRA   GL K VDVLDTLGS M NL+ SG                        + G
Sbjct: 110 SSLLGRAGTMGLGKAVDVLDTLGSSMTNLNLSGGFSSATTVKGNKISILSFEVANTIVKG 169

Query: 66  VNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGD 125
            NLM SLSK+++  +KE V+PSEGVQ L+S D   LL + A+DKREEL +F  EV+RFG+
Sbjct: 170 ANLMHSLSKDSITHLKEVVLPSEGVQNLISKDMDELLRIAAADKREELRIFSGEVVRFGN 229

Query: 126 RCKDPQWHNL----DRLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFEQ 177
           RCKDPQ+HNL    DRL SE    K  +++ E  M  +M+  H T++LYHEL+A DRFEQ
Sbjct: 230 RCKDPQYHNLDRFFDRLGSEFTPQKHLKQEAETIMHQMMSFVHFTADLYHELHALDRFEQ 289
[Close]
BLAST of Spo08990.1 vs. TAIR (Arabidopsis)
Match: AT5G08660.1 (Protein of unknown function (DUF668))

HSP 1 Score: 131.3 bits (329), Expect = 5.700e-31
Identity = 82/188 (43.62%), Postives = 104/188 (55.32%), Query Frame = 1 

		  

Query: 15  AGLEKVVDVLDTLGSGMINLSHSGFLTGV----------------------NLMQSLSKE 74
           AGL +  DVLDTLGS M +LS  GF +GV                      NL++SLSK 
Sbjct: 114 AGLGRAKDVLDTLGSSMTDLSSGGFTSGVATKGNELGILAFEVANTIVKSSNLIESLSKR 173

Query: 75  NVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGDRCKDPQWHNL 134
           N+  +K  ++ SEGVQ LVS+D   LL LVA+DKR+EL VF  EV+RFG+R KD QWHNL
Sbjct: 174 NIEHLKGTILYSEGVQNLVSNDFDELLRLVAADKRQELQVFSGEVVRFGNRSKDFQWHNL 233

Query: 135 ----DRLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDRFEQDYRQKVEELK 177
               DR+  E    +  +E     +  LM L   T+ELY EL    R E+DY QK  E +
Sbjct: 234 QRYFDRISKELTPQRQLKEDAVLVVDQLMVLVQYTAELYQELQVLYRLEKDYEQKRREEE 293
[Close]
BLAST of Spo08990.1 vs. TAIR (Arabidopsis)
Match: AT3G23160.1 (Protein of unknown function (DUF668))

HSP 1 Score: 53.5 bits (127), Expect = 1.500e-7
Identity = 36/123 (29.27%), Postives = 61/123 (49.59%), Query Frame = 1 

		  

Query: 43  VNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGD 102
           ++L +SLS   ++ +K EV  SEGV+ LVSSD   LL L  S+K ++L      V R G 
Sbjct: 58  IHLHRSLSDTEISKLKAEVFHSEGVRKLVSSDENHLLDLSVSEKLDDLSRVASVVSRLGK 117

Query: 103 RCKDPQWHNLDRL--DSENAVYKPQR-----EQVEAKMQDLMTLAHNTSELYHELNAFDR 159
           +C +P     + +  D  N     ++     + +E+ ++ +    + T  LY E+   + 
Sbjct: 118 KCNEPALQGFEHVYEDIVNGAIDFRKLGFLVKDMESMVKKMERFVNATCSLYCEMEVMNE 177
[Close]
BLAST of Spo08990.1 vs. TAIR (Arabidopsis)
Match: AT5G04550.1 (Protein of unknown function (DUF668))

HSP 1 Score: 47.8 bits (112), Expect = 8.300e-6
Identity = 29/127 (22.83%), Postives = 64/127 (50.39%), Query Frame = 1 

		  

Query: 43  VNLMQSLSKENVNFIKEEVIPSEGVQYLVSSDTKVLLSLVASDKREELDVFCKEVIRFGD 102
           V+L QSLS +NV  +++E+  S G++ LVS D   ++ L+  +  E ++   K V R   
Sbjct: 41  VHLWQSLSDKNVARLRDEITHSTGIKKLVSEDDDFIVRLIRDEMMENVENVAKAVARLAR 100

Query: 103 RCKDPQ-------WHNLDRLDSENAVYKPQREQVEAKMQDLMTLAHNTSELYHELNAFDR 162
           +C DP+       + ++ +  ++   ++   ++++ K + +     + + LY E      
Sbjct: 101 KCNDPKLKCFENCFSDMMKTGADPYGWQFGWKKMDKKAKKMERFISSNASLYQETEILAD 160
The following BLAST results are available for this feature:
BLAST of Spo08990.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731360534|ref|XP_010691873.1|1.8e-7477.6PREDICTED: uncharacterized pro... [more]
gi|902195677|gb|KNA12923.1|2.8e-6456.8hypothetical protein SOVF_1219... [more]
gi|565350193|ref|XP_006342058.1|1.7e-5357.3PREDICTED: uncharacterized pro... [more]
gi|970020787|ref|XP_015071639.1|1.1e-5256.3PREDICTED: uncharacterized pro... [more]
gi|460385344|ref|XP_004238364.1|1.1e-5256.3PREDICTED: uncharacterized pro... [more]
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BLAST of Spo08990.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8EB67_BETVU1.2e-7477.6Uncharacterized protein OS=Bet... [more]
A0A0K9R087_SPIOL2.0e-6456.8Uncharacterized protein OS=Spi... [more]
M1ALK7_SOLTU1.2e-5357.3Uncharacterized protein OS=Sol... [more]
A0A0V0IPN4_SOLCH2.0e-5357.3Putative elongation factor G-l... [more]
K4BVN0_SOLLC7.7e-5356.3Uncharacterized protein OS=Sol... [more]
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BLAST of Spo08990.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo08990.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G30755.11.9e-4752.7Protein of unknown function (D... [more]
AT1G34320.14.2e-4246.9Protein of unknown function (D... [more]
AT5G08660.15.7e-3143.6Protein of unknown function (D... [more]
AT3G23160.11.5e-729.2Protein of unknown function (D... [more]
AT5G04550.18.3e-622.8Protein of unknown function (D... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021864Protein of unknown function DUF3475PFAMPF11961DUF3475coord: 42..86
score: 8.7
NoneNo IPR availablePANTHERPTHR31730FAMILY NOT NAMEDcoord: 6..176
score: 3.3
NoneNo IPR availablePANTHERPTHR31730:SF5SUBFAMILY NOT NAMEDcoord: 6..176
score: 3.3

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
biological_process GO:0061025 membrane fusion
biological_process GO:0006397 mRNA processing
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
biological_process GO:0015031 protein transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005829 cytosol
cellular_component GO:0005795 Golgi stack
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0005634 nucleus
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0043565 sequence-specific DNA binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo000670.76Barchart | Table
Spo250780.75Barchart | Table
Spo071840.71Barchart | Table
Spo139520.71Barchart | Table
Spo089990.71Barchart | Table
Spo251710.70Barchart | Table
Spo071990.70Barchart | Table
Spo166870.70Barchart | Table
Spo046860.70Barchart | Table
Spo229060.70Barchart | Table
Spo238520.69Barchart | Table
Spo261900.69Barchart | Table
Spo050930.69Barchart | Table
Spo152700.69Barchart | Table
Spo021750.69Barchart | Table
Spo192220.69Barchart | Table
Spo110270.69Barchart | Table
Spo236640.68Barchart | Table
Spo052710.68Barchart | Table
Spo054870.68Barchart | Table
Spo104270.68Barchart | Table
Spo159110.68Barchart | Table
Spo109940.68Barchart | Table
Spo137060.68Barchart | Table
Spo116230.68Barchart | Table
Spo125210.68Barchart | Table
Spo065060.68Barchart | Table
Spo013970.68Barchart | Table
Spo173910.67Barchart | Table
Spo010690.67Barchart | Table
Spo092660.67Barchart | Table
Spo100420.67Barchart | Table
Spo119180.67Barchart | Table
Spo126630.67Barchart | Table
Spo146610.67Barchart | Table
Spo195990.67Barchart | Table
Spo215990.67Barchart | Table
Spo220280.67Barchart | Table
Spo259170.67Barchart | Table
Spo271660.67Barchart | Table
Spo119190.66Barchart | Table
Spo179400.66Barchart | Table
Spo184510.66Barchart | Table
Spo107510.66Barchart | Table
Spo079610.66Barchart | Table
Spo197010.66Barchart | Table
Spo209090.66Barchart | Table
Spo050150.66Barchart | Table
Spo100660.66Barchart | Table
Spo082560.66Barchart | Table
Spo244680.66Barchart | Table
Spo140080.66Barchart | Table
Spo169010.66Barchart | Table
Spo170320.66Barchart | Table
Spo241170.65Barchart | Table
Spo196900.65Barchart | Table
Spo243090.65Barchart | Table
Spo123220.65Barchart | Table
Spo062100.65Barchart | Table
Spo247120.65Barchart | Table
Spo224420.65Barchart | Table
Spo248180.65Barchart | Table
Spo093500.65Barchart | Table
Spo148810.65Barchart | Table